HEADER TRANSFERASE 08-DEC-20 7KYQ TITLE CRYSTAL STRUCTURE OF HUMAN BCCIP BETA (NATIVE1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BRCA2 AND CDKN1A-INTERACTING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 61-314; COMPND 5 SYNONYM: P21- AND CDK-ASSOCIATED PROTEIN 1,PROTEIN TOK-1; COMPND 6 EC: 2.-.-.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BCCIP, TOK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS BRCA2, EIF6, CANCER SUPPRESSOR, RIBOSOME BIOGENESIS, GNAT, GCN5- KEYWDS 2 RELATED ACETYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR W.S.CHOI,B.LIU,Z.SHEN,W.YANG REVDAT 2 06-MAR-24 7KYQ 1 REMARK REVDAT 1 09-JUN-21 7KYQ 0 JRNL AUTH W.S.CHOI,B.LIU,Z.SHEN,W.YANG JRNL TITL STRUCTURE OF HUMAN BCCIP AND IMPLICATIONS FOR BINDING AND JRNL TITL 2 MODIFICATION OF PARTNER PROTEINS. JRNL REF PROTEIN SCI. V. 30 693 2021 JRNL REFN ESSN 1469-896X JRNL PMID 33452718 JRNL DOI 10.1002/PRO.4026 REMARK 2 REMARK 2 RESOLUTION. 3.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 6877 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.340 REMARK 3 FREE R VALUE TEST SET COUNT : 367 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.8400 - 4.4200 1.00 2371 136 0.1946 0.2200 REMARK 3 2 4.4100 - 3.5100 1.00 2240 131 0.2351 0.2962 REMARK 3 3 3.5000 - 3.0600 0.85 1899 100 0.2748 0.2997 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.365 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.188 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 85.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 86.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 1883 REMARK 3 ANGLE : 1.539 2538 REMARK 3 CHIRALITY : 0.073 287 REMARK 3 PLANARITY : 0.007 325 REMARK 3 DIHEDRAL : 19.063 712 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.5374 37.1493 21.1692 REMARK 3 T TENSOR REMARK 3 T11: 0.6430 T22: 0.6335 REMARK 3 T33: 0.8968 T12: 0.0490 REMARK 3 T13: 0.1694 T23: 0.1435 REMARK 3 L TENSOR REMARK 3 L11: 6.9043 L22: 7.7835 REMARK 3 L33: 4.3040 L12: -0.5411 REMARK 3 L13: -2.9133 L23: -0.2090 REMARK 3 S TENSOR REMARK 3 S11: 0.5265 S12: 0.1754 S13: 1.1526 REMARK 3 S21: -0.2258 S22: -0.2003 S23: -1.3013 REMARK 3 S31: -0.8683 S32: 0.2464 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 158 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.0282 33.2302 7.6166 REMARK 3 T TENSOR REMARK 3 T11: 1.2637 T22: 1.0828 REMARK 3 T33: 0.8138 T12: 0.4128 REMARK 3 T13: 0.3301 T23: 0.1966 REMARK 3 L TENSOR REMARK 3 L11: 2.7654 L22: 3.4265 REMARK 3 L33: 0.2587 L12: -0.5478 REMARK 3 L13: -0.4111 L23: 1.4160 REMARK 3 S TENSOR REMARK 3 S11: 0.7710 S12: 1.1497 S13: 0.1453 REMARK 3 S21: -1.6912 S22: -0.6604 S23: -0.7663 REMARK 3 S31: -0.4945 S32: 0.2734 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 253 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.7052 29.9362 14.6146 REMARK 3 T TENSOR REMARK 3 T11: 0.7726 T22: 0.9276 REMARK 3 T33: 0.5778 T12: 0.2130 REMARK 3 T13: 0.1979 T23: 0.1337 REMARK 3 L TENSOR REMARK 3 L11: 4.7845 L22: 0.5319 REMARK 3 L33: 4.2258 L12: 3.3751 REMARK 3 L13: -0.7279 L23: 4.1055 REMARK 3 S TENSOR REMARK 3 S11: 0.3220 S12: 1.1973 S13: 0.1762 REMARK 3 S21: -1.0030 S22: -0.4962 S23: -0.1029 REMARK 3 S31: -0.6750 S32: -0.3599 S33: 0.0003 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 254 THROUGH 314 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.5675 21.8957 12.0417 REMARK 3 T TENSOR REMARK 3 T11: 0.8750 T22: 0.9677 REMARK 3 T33: 1.0159 T12: -0.0037 REMARK 3 T13: 0.0871 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 2.5626 L22: -0.1264 REMARK 3 L33: 0.4129 L12: -2.9153 REMARK 3 L13: -6.2301 L23: 1.5296 REMARK 3 S TENSOR REMARK 3 S11: 0.4262 S12: 0.2928 S13: -0.9403 REMARK 3 S21: -0.3359 S22: -0.2878 S23: 0.0223 REMARK 3 S31: -0.0393 S32: -1.0325 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7KYQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1000253395. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-AUG-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7295 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.040 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.09 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M TRI-SODIUM CITRATE, 18-20% REMARK 280 PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.18000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 56.33500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 56.33500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.09000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 56.33500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 56.33500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 42.27000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 56.33500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 56.33500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 14.09000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 56.33500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 56.33500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.27000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 28.18000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 439 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 443 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 110 REMARK 465 VAL A 111 REMARK 465 SER A 112 REMARK 465 GLU A 113 REMARK 465 ASP A 114 REMARK 465 SER A 115 REMARK 465 ASN A 116 REMARK 465 ASP A 117 REMARK 465 ASP A 118 REMARK 465 MET A 119 REMARK 465 ALA A 229 REMARK 465 GLY A 230 REMARK 465 LYS A 231 REMARK 465 ASN A 232 REMARK 465 ASN A 233 REMARK 465 SER A 234 REMARK 465 LYS A 235 REMARK 465 LYS A 236 REMARK 465 LYS A 237 REMARK 465 PRO A 238 REMARK 465 SER A 239 REMARK 465 ASN A 240 REMARK 465 LYS A 241 REMARK 465 LYS A 242 REMARK 465 LYS A 243 REMARK 465 ALA A 244 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 271 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 164 O HOH A 401 1.70 REMARK 500 OG1 THR A 134 O HOH A 402 1.99 REMARK 500 CB SER A 272 O HOH A 416 2.01 REMARK 500 CE MET A 161 O HOH A 403 2.07 REMARK 500 O ASN A 156 O HOH A 403 2.10 REMARK 500 OE2 GLU A 258 NZ LYS A 307 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 414 O HOH A 414 7556 0.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 291 NE - CZ - NH1 ANGL. DEV. = -3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 121 -2.74 65.13 REMARK 500 ASN A 156 19.42 -145.90 REMARK 500 LYS A 159 -11.85 70.07 REMARK 500 THR A 172 -16.85 74.15 REMARK 500 ALA A 251 -12.93 84.82 REMARK 500 THR A 288 74.87 42.42 REMARK 500 REMARK 500 REMARK: NULL DBREF 7KYQ A 61 314 UNP Q9P287 BCCIP_HUMAN 61 314 SEQADV 7KYQ ALA A 59 UNP Q9P287 EXPRESSION TAG SEQADV 7KYQ HIS A 60 UNP Q9P287 EXPRESSION TAG SEQRES 1 A 256 ALA HIS PHE GLU ALA TYR SER LEU SER ASP ASN ASP TYR SEQRES 2 A 256 ASP GLY ILE LYS LYS LEU LEU GLN GLN LEU PHE LEU LYS SEQRES 3 A 256 ALA PRO VAL ASN THR ALA GLU LEU THR ASP LEU LEU ILE SEQRES 4 A 256 GLN GLN ASN HIS ILE GLY SER VAL ILE LYS GLN THR ASP SEQRES 5 A 256 VAL SER GLU ASP SER ASN ASP ASP MET ASP GLU ASP GLU SEQRES 6 A 256 VAL PHE GLY PHE ILE SER LEU LEU ASN LEU THR GLU ARG SEQRES 7 A 256 LYS GLY THR GLN CYS VAL GLU GLN ILE GLN GLU LEU VAL SEQRES 8 A 256 LEU ARG PHE CYS GLU LYS ASN CYS GLU LYS SER MET VAL SEQRES 9 A 256 GLU GLN LEU ASP LYS PHE LEU ASN ASP THR THR LYS PRO SEQRES 10 A 256 VAL GLY LEU LEU LEU SER GLU ARG PHE ILE ASN VAL PRO SEQRES 11 A 256 PRO GLN ILE ALA LEU PRO MET TYR GLN GLN LEU GLN LYS SEQRES 12 A 256 GLU LEU ALA GLY ALA HIS ARG THR ASN LYS PRO CYS GLY SEQRES 13 A 256 LYS CYS TYR PHE TYR LEU LEU ILE SER LYS THR PHE VAL SEQRES 14 A 256 GLU ALA GLY LYS ASN ASN SER LYS LYS LYS PRO SER ASN SEQRES 15 A 256 LYS LYS LYS ALA ALA LEU MET PHE ALA ASN ALA GLU GLU SEQRES 16 A 256 GLU PHE PHE TYR GLU LYS ALA ILE LEU LYS PHE ASN TYR SEQRES 17 A 256 SER VAL GLN GLU GLU SER ASP THR CYS LEU GLY GLY LYS SEQRES 18 A 256 TRP SER PHE ASP ASP VAL PRO MET THR PRO LEU ARG THR SEQRES 19 A 256 VAL MET LEU ILE PRO GLY ASP LYS MET ASN GLU ILE MET SEQRES 20 A 256 ASP LYS LEU LYS GLU TYR LEU SER VAL FORMUL 2 HOH *44(H2 O) HELIX 1 AA1 SER A 67 ASN A 69 5 3 HELIX 2 AA2 ASP A 70 PHE A 82 1 13 HELIX 3 AA3 ASN A 88 GLN A 99 1 12 HELIX 4 AA4 THR A 139 LYS A 155 1 17 HELIX 5 AA5 SER A 160 ASN A 170 1 11 HELIX 6 AA6 PRO A 188 GLN A 190 5 3 HELIX 7 AA7 ILE A 191 THR A 209 1 19 HELIX 8 AA8 LYS A 211 LYS A 215 5 5 HELIX 9 AA9 GLU A 253 GLU A 258 1 6 HELIX 10 AB1 LYS A 300 SER A 313 1 14 SHEET 1 AA1 6 HIS A 60 TYR A 64 0 SHEET 2 AA1 6 SER A 104 THR A 109 -1 O VAL A 105 N TYR A 64 SHEET 3 AA1 6 VAL A 124 ASN A 132 -1 O PHE A 125 N ILE A 106 SHEET 4 AA1 6 VAL A 176 ARG A 183 -1 O LEU A 178 N LEU A 131 SHEET 5 AA1 6 PHE A 218 PHE A 226 1 O LEU A 220 N GLY A 177 SHEET 6 AA1 6 MET A 247 PHE A 248 -1 O MET A 247 N PHE A 226 SHEET 1 AA2 7 HIS A 60 TYR A 64 0 SHEET 2 AA2 7 SER A 104 THR A 109 -1 O VAL A 105 N TYR A 64 SHEET 3 AA2 7 VAL A 124 ASN A 132 -1 O PHE A 125 N ILE A 106 SHEET 4 AA2 7 VAL A 176 ARG A 183 -1 O LEU A 178 N LEU A 131 SHEET 5 AA2 7 PHE A 218 PHE A 226 1 O LEU A 220 N GLY A 177 SHEET 6 AA2 7 PRO A 289 PRO A 297 -1 O ILE A 296 N TYR A 219 SHEET 7 AA2 7 LEU A 262 SER A 267 -1 N PHE A 264 O VAL A 293 CRYST1 112.670 112.670 56.360 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008875 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008875 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017743 0.00000