HEADER LIGASE/DNA 17-DEC-20 7L34 TITLE HUMAN DNA LIGASE 1 - R641L NICKED DNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA LIGASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNA LIGASE I,POLYDEOXYRIBONUCLEOTIDE SYNTHASE [ATP] 1; COMPND 5 EC: 6.5.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*C)-3'); COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'-D(P*GP*TP*CP*GP*GP*AP*C)-3'); COMPND 14 CHAIN: C; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: DNA (5'- COMPND 18 D(*GP*TP*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'); COMPND 19 CHAIN: D; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LIG1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_COMMON: HUMAN; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 MOL_ID: 4; SOURCE 19 SYNTHETIC: YES; SOURCE 20 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 21 ORGANISM_COMMON: HUMAN; SOURCE 22 ORGANISM_TAXID: 9606 KEYWDS DNA LIGASE, LIGASE, LIGASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR P.P.TUMBALE,R.S.WILLIAMS,M.S.SCHELLENBERG REVDAT 4 18-OCT-23 7L34 1 REMARK REVDAT 3 03-MAR-21 7L34 1 JRNL REVDAT 2 27-JAN-21 7L34 1 JRNL REVDAT 1 13-JAN-21 7L34 0 JRNL AUTH T.J.JURKIW,P.P.TUMBALE,M.J.SCHELLENBERG, JRNL AUTH 2 C.CUNNINGHAM-RUNDLES,R.S.WILLIAMS,P.J.O'BRIEN JRNL TITL LIG1 SYNDROME MUTATIONS REMODEL A COOPERATIVE NETWORK OF JRNL TITL 2 LIGAND BINDING INTERACTIONS TO COMPROMISE LIGATION JRNL TITL 3 EFFICIENCY. JRNL REF NUCLEIC ACIDS RES. V. 49 1619 2021 JRNL REFN ESSN 1362-4962 JRNL PMID 33444456 JRNL DOI 10.1093/NAR/GKAA1297 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 62117 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.280 REMARK 3 FREE R VALUE TEST SET COUNT : 1416 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.3600 - 4.0940 0.99 6412 148 0.1416 0.1509 REMARK 3 2 4.0940 - 3.2500 1.00 6198 152 0.1464 0.1666 REMARK 3 3 3.2500 - 2.8393 1.00 6151 139 0.1777 0.2242 REMARK 3 4 2.8393 - 2.5798 1.00 6122 145 0.1806 0.1931 REMARK 3 5 2.5798 - 2.3949 1.00 6109 142 0.1829 0.2248 REMARK 3 6 2.3949 - 2.2537 1.00 6098 141 0.1854 0.2491 REMARK 3 7 2.2537 - 2.1409 1.00 6070 145 0.1941 0.2111 REMARK 3 8 2.1409 - 2.0477 1.00 6093 141 0.2015 0.2194 REMARK 3 9 2.0477 - 1.9688 0.99 5994 138 0.2219 0.2461 REMARK 3 10 1.9688 - 1.9010 0.90 5454 125 0.2487 0.2785 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5948 REMARK 3 ANGLE : 0.765 8214 REMARK 3 CHIRALITY : 0.045 926 REMARK 3 PLANARITY : 0.004 939 REMARK 3 DIHEDRAL : 16.706 3505 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -5.5980 -12.4607 31.0891 REMARK 3 T TENSOR REMARK 3 T11: 0.1559 T22: 0.1261 REMARK 3 T33: 0.1794 T12: 0.0212 REMARK 3 T13: 0.0179 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 0.7414 L22: 0.4506 REMARK 3 L33: 0.8347 L12: 0.2679 REMARK 3 L13: -0.0724 L23: -0.0737 REMARK 3 S TENSOR REMARK 3 S11: 0.0019 S12: 0.0387 S13: 0.0514 REMARK 3 S21: -0.0207 S22: 0.0434 S23: 0.0305 REMARK 3 S31: -0.1293 S32: -0.0176 S33: -0.0308 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7L34 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1000252898. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62128 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.87300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6P0A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES, PH 6, 100 MM LITHIUM REMARK 280 ACETATE, 15% (W/V) POLYETHYLENE GLYCOL PEG3350, PH 6.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.96500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.42900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.37250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.42900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.96500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.37250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 387 REMARK 465 SER A 388 REMARK 465 THR A 389 REMARK 465 GLN A 390 REMARK 465 SER A 901 REMARK 465 GLN A 902 REMARK 465 ILE A 903 REMARK 465 GLN A 904 REMARK 465 ASN A 905 REMARK 465 GLN A 906 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 391 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 628 CG CD OE1 OE2 REMARK 470 GLU A 650 CG CD OE1 OE2 REMARK 470 GLU A 785 CG CD OE1 OE2 REMARK 470 GLU A 880 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H LYS A 747 O HOH A 1002 1.23 REMARK 500 OD2 ASP A 827 HH12 ARG A 859 1.38 REMARK 500 HE ARG A 683 O HOH A 1003 1.46 REMARK 500 OD1 ASP A 262 HG SER A 264 1.51 REMARK 500 O VAL A 753 HZ1 LYS A 845 1.58 REMARK 500 O HOH D 147 O HOH D 157 1.82 REMARK 500 O HOH A 1281 O HOH A 1308 1.98 REMARK 500 O HOH A 1142 O HOH A 1208 2.01 REMARK 500 O HOH A 1032 O HOH A 1349 2.02 REMARK 500 OE2 GLU A 553 O HOH A 1001 2.03 REMARK 500 O HOH A 1346 O HOH A 1382 2.04 REMARK 500 N LYS A 747 O HOH A 1002 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG D 13 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC D 15 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC D 20 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DT D 22 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 261 134.42 -10.18 REMARK 500 HIS A 436 -128.34 56.61 REMARK 500 ALA A 455 -148.04 -137.01 REMARK 500 PHE A 558 40.78 -106.56 REMARK 500 ASP A 647 -8.37 83.64 REMARK 500 GLU A 692 -53.06 -126.91 REMARK 500 ASP A 728 -32.28 -132.60 REMARK 500 ARG A 738 113.43 -164.41 REMARK 500 HIS A 740 66.40 -106.74 REMARK 500 ASP A 827 -111.15 40.21 REMARK 500 ASP A 827 -113.64 43.98 REMARK 500 SER A 839 -48.32 -145.94 REMARK 500 REMARK 500 REMARK: NULL DBREF 7L34 A 262 906 UNP P18858 DNLI1_HUMAN 262 906 DBREF 7L34 B 3 13 PDB 7L34 7L34 3 13 DBREF 7L34 C 1 7 PDB 7L34 7L34 1 7 DBREF 7L34 D 9 26 PDB 7L34 7L34 9 26 SEQADV 7L34 SER A 260 UNP P18858 EXPRESSION TAG SEQADV 7L34 ASN A 261 UNP P18858 EXPRESSION TAG SEQADV 7L34 LEU A 641 UNP P18858 ARG 641 ENGINEERED MUTATION SEQRES 1 A 647 SER ASN ASP PRO SER GLY TYR ASN PRO ALA LYS ASN ASN SEQRES 2 A 647 TYR HIS PRO VAL GLU ASP ALA CYS TRP LYS PRO GLY GLN SEQRES 3 A 647 LYS VAL PRO TYR LEU ALA VAL ALA ARG THR PHE GLU LYS SEQRES 4 A 647 ILE GLU GLU VAL SER ALA ARG LEU ARG MET VAL GLU THR SEQRES 5 A 647 LEU SER ASN LEU LEU ARG SER VAL VAL ALA LEU SER PRO SEQRES 6 A 647 PRO ASP LEU LEU PRO VAL LEU TYR LEU SER LEU ASN HIS SEQRES 7 A 647 LEU GLY PRO PRO GLN GLN GLY LEU GLU LEU GLY VAL GLY SEQRES 8 A 647 ASP GLY VAL LEU LEU LYS ALA VAL ALA GLN ALA THR GLY SEQRES 9 A 647 ARG GLN LEU GLU SER VAL ARG ALA GLU ALA ALA GLU LYS SEQRES 10 A 647 GLY ASP VAL GLY LEU VAL ALA GLU ASN SER ARG SER THR SEQRES 11 A 647 GLN ARG LEU MET LEU PRO PRO PRO PRO LEU THR ALA SER SEQRES 12 A 647 GLY VAL PHE SER LYS PHE ARG ASP ILE ALA ARG LEU THR SEQRES 13 A 647 GLY SER ALA SER THR ALA LYS LYS ILE ASP ILE ILE LYS SEQRES 14 A 647 GLY LEU PHE VAL ALA CYS ARG HIS SER GLU ALA ARG PHE SEQRES 15 A 647 ILE ALA ARG SER LEU SER GLY ARG LEU ARG LEU GLY LEU SEQRES 16 A 647 ALA GLU GLN SER VAL LEU ALA ALA LEU SER GLN ALA VAL SEQRES 17 A 647 SER LEU THR PRO PRO GLY GLN GLU PHE PRO PRO ALA MET SEQRES 18 A 647 VAL ASP ALA GLY LYS GLY LYS THR ALA GLU ALA ARG LYS SEQRES 19 A 647 THR TRP LEU GLU GLU GLN GLY MET ILE LEU LYS GLN THR SEQRES 20 A 647 PHE CYS GLU VAL PRO ASP LEU ASP ARG ILE ILE PRO VAL SEQRES 21 A 647 LEU LEU GLU HIS GLY LEU GLU ARG LEU PRO GLU HIS CYS SEQRES 22 A 647 LYS LEU SER PRO GLY ILE PRO LEU LYS PRO MET LEU ALA SEQRES 23 A 647 HIS PRO THR ARG GLY ILE SER GLU VAL LEU LYS ARG PHE SEQRES 24 A 647 GLU GLU ALA ALA PHE THR CYS GLU TYR LYS TYR ASP GLY SEQRES 25 A 647 GLN ARG ALA GLN ILE HIS ALA LEU GLU GLY GLY GLU VAL SEQRES 26 A 647 LYS ILE PHE SER ARG ASN GLN GLU ASP ASN THR GLY LYS SEQRES 27 A 647 TYR PRO ASP ILE ILE SER ARG ILE PRO LYS ILE LYS LEU SEQRES 28 A 647 PRO SER VAL THR SER PHE ILE LEU ASP THR GLU ALA VAL SEQRES 29 A 647 ALA TRP ASP ARG GLU LYS LYS GLN ILE GLN PRO PHE GLN SEQRES 30 A 647 VAL LEU THR THR LEU LYS ARG LYS GLU VAL ASP ALA SER SEQRES 31 A 647 GLU ILE GLN VAL GLN VAL CYS LEU TYR ALA PHE ASP LEU SEQRES 32 A 647 ILE TYR LEU ASN GLY GLU SER LEU VAL ARG GLU PRO LEU SEQRES 33 A 647 SER ARG ARG ARG GLN LEU LEU ARG GLU ASN PHE VAL GLU SEQRES 34 A 647 THR GLU GLY GLU PHE VAL PHE ALA THR SER LEU ASP THR SEQRES 35 A 647 LYS ASP ILE GLU GLN ILE ALA GLU PHE LEU GLU GLN SER SEQRES 36 A 647 VAL LYS ASP SER CYS GLU GLY LEU MET VAL LYS THR LEU SEQRES 37 A 647 ASP VAL ASP ALA THR TYR GLU ILE ALA LYS ARG SER HIS SEQRES 38 A 647 ASN TRP LEU LYS LEU LYS LYS ASP TYR LEU ASP GLY VAL SEQRES 39 A 647 GLY ASP THR LEU ASP LEU VAL VAL ILE GLY ALA TYR LEU SEQRES 40 A 647 GLY ARG GLY LYS ARG ALA GLY ARG TYR GLY GLY PHE LEU SEQRES 41 A 647 LEU ALA SER TYR ASP GLU ASP SER GLU GLU LEU GLN ALA SEQRES 42 A 647 ILE CYS LYS LEU GLY THR GLY PHE SER ASP GLU GLU LEU SEQRES 43 A 647 GLU GLU HIS HIS GLN SER LEU LYS ALA LEU VAL LEU PRO SEQRES 44 A 647 SER PRO ARG PRO TYR VAL ARG ILE ASP GLY ALA VAL ILE SEQRES 45 A 647 PRO ASP HIS TRP LEU ASP PRO SER ALA VAL TRP GLU VAL SEQRES 46 A 647 LYS CYS ALA ASP LEU SER LEU SER PRO ILE TYR PRO ALA SEQRES 47 A 647 ALA ARG GLY LEU VAL ASP SER ASP LYS GLY ILE SER LEU SEQRES 48 A 647 ARG PHE PRO ARG PHE ILE ARG VAL ARG GLU ASP LYS GLN SEQRES 49 A 647 PRO GLU GLN ALA THR THR SER ALA GLN VAL ALA CYS LEU SEQRES 50 A 647 TYR ARG LYS GLN SER GLN ILE GLN ASN GLN SEQRES 1 B 11 DG DC DT DG DA DT DG DC DG DT DC SEQRES 1 C 7 DG DT DC DG DG DA DC SEQRES 1 D 18 DG DT DC DC DG DA DC DG DA DC DG DC DA SEQRES 2 D 18 DT DC DA DG DC HET AMP C 101 35 HETNAM AMP ADENOSINE MONOPHOSPHATE FORMUL 5 AMP C10 H14 N5 O7 P FORMUL 6 HOH *547(H2 O) HELIX 1 AA1 ASP A 262 TYR A 266 5 5 HELIX 2 AA2 PRO A 288 GLU A 301 1 14 HELIX 3 AA3 ALA A 304 SER A 323 1 20 HELIX 4 AA4 ASP A 326 ASN A 336 1 11 HELIX 5 AA5 PRO A 340 GLY A 344 5 5 HELIX 6 AA6 GLY A 350 GLY A 363 1 14 HELIX 7 AA7 GLN A 365 GLY A 377 1 13 HELIX 8 AA8 ASP A 378 SER A 386 1 9 HELIX 9 AA9 THR A 400 LEU A 414 1 15 HELIX 10 AB1 ALA A 418 CYS A 434 1 17 HELIX 11 AB2 SER A 437 SER A 447 1 11 HELIX 12 AB3 ALA A 455 THR A 470 1 16 HELIX 13 AB4 THR A 488 VAL A 510 1 23 HELIX 14 AB5 ASP A 512 GLY A 524 1 13 HELIX 15 AB6 ARG A 527 CYS A 532 1 6 HELIX 16 AB7 GLY A 550 PHE A 558 1 9 HELIX 17 AB8 ASN A 594 LYS A 597 5 4 HELIX 18 AB9 TYR A 598 ARG A 604 1 7 HELIX 19 AC1 ARG A 604 LYS A 609 1 6 HELIX 20 AC2 PRO A 634 LEU A 641 1 8 HELIX 21 AC3 PRO A 674 PHE A 686 1 13 HELIX 22 AC4 ASP A 703 ASP A 717 1 15 HELIX 23 AC5 LYS A 746 LEU A 750 5 5 HELIX 24 AC6 ARG A 768 ALA A 772 5 5 HELIX 25 AC7 SER A 801 ALA A 814 1 14 HELIX 26 AC8 GLN A 883 ALA A 887 5 5 HELIX 27 AC9 THR A 889 LYS A 899 1 11 SHEET 1 AA1 5 ALA A 545 PRO A 547 0 SHEET 2 AA1 5 TRP A 742 LEU A 745 1 O TRP A 742 N HIS A 546 SHEET 3 AA1 5 GLY A 721 THR A 726 -1 N LEU A 722 O LEU A 745 SHEET 4 AA1 5 PHE A 563 LYS A 568 -1 N GLU A 566 O MET A 723 SHEET 5 AA1 5 SER A 698 ASP A 700 -1 O LEU A 699 N CYS A 565 SHEET 1 AA2 5 VAL A 584 PHE A 587 0 SHEET 2 AA2 5 GLN A 572 ALA A 578 -1 N HIS A 577 O LYS A 585 SHEET 3 AA2 5 PHE A 616 ASP A 626 -1 O ALA A 622 N GLN A 572 SHEET 4 AA2 5 VAL A 653 LEU A 665 -1 O CYS A 656 N VAL A 623 SHEET 5 AA2 5 GLU A 668 SER A 669 -1 O GLU A 668 N LEU A 665 SHEET 1 AA3 4 GLN A 631 ILE A 632 0 SHEET 2 AA3 4 PHE A 616 ASP A 626 -1 N ASP A 626 O GLN A 631 SHEET 3 AA3 4 VAL A 653 LEU A 665 -1 O CYS A 656 N VAL A 623 SHEET 4 AA3 4 PHE A 693 PHE A 695 1 O VAL A 694 N ALA A 659 SHEET 1 AA4 6 VAL A 816 LEU A 817 0 SHEET 2 AA4 6 HIS A 834 LEU A 836 -1 O TRP A 835 N LEU A 817 SHEET 3 AA4 6 THR A 756 LEU A 766 -1 N ALA A 764 O HIS A 834 SHEET 4 AA4 6 TYR A 775 ASP A 784 -1 O LEU A 779 N ILE A 762 SHEET 5 AA4 6 GLU A 789 LEU A 796 -1 O GLU A 789 N ASP A 784 SHEET 6 AA4 6 VAL A 824 ARG A 825 1 O ARG A 825 N LEU A 790 SHEET 1 AA5 5 VAL A 816 LEU A 817 0 SHEET 2 AA5 5 HIS A 834 LEU A 836 -1 O TRP A 835 N LEU A 817 SHEET 3 AA5 5 THR A 756 LEU A 766 -1 N ALA A 764 O HIS A 834 SHEET 4 AA5 5 VAL A 841 LYS A 845 -1 O VAL A 844 N LEU A 757 SHEET 5 AA5 5 ARG A 874 VAL A 878 -1 O ARG A 877 N GLU A 843 SHEET 1 AA6 2 ASP A 848 SER A 852 0 SHEET 2 AA6 2 GLY A 867 ARG A 871 -1 O ARG A 871 N ASP A 848 LINK P DG C 1 O3P AMP C 101 1555 1555 1.58 CISPEP 1 PHE A 476 PRO A 477 0 -4.59 CRYST1 61.930 110.745 114.858 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016147 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009030 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008706 0.00000