HEADER HYDROLASE 19-DEC-20 7L4I TITLE CRYSTAL STRUCTURE OF A SUBSTRATE-TRAPPING VARIANT OF PPM1H PHOSPHATASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN PHOSPHATASE 1H; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.3.16; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPM1H, ARHCL1, KIAA1157, URCC2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RAB GTPASE, LRRK2 KINASE, PP2C/PPM FAMILY, MEMBRANE TRAFFICKING, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.R.KHAN,D.WASCHBUSCH REVDAT 3 18-OCT-23 7L4I 1 REMARK REVDAT 2 16-FEB-22 7L4I 1 JRNL REVDAT 1 04-AUG-21 7L4I 0 JRNL AUTH D.WASCHBUSCH,K.BERNDSEN,P.LIS,A.KNEBEL,Y.P.LAM,D.R.ALESSI, JRNL AUTH 2 A.R.KHAN JRNL TITL STRUCTURAL BASIS FOR THE SPECIFICITY OF PPM1H PHOSPHATASE JRNL TITL 2 FOR RAB GTPASES. JRNL REF EMBO REP. V. 22 52675 2021 JRNL REFN ESSN 1469-3178 JRNL PMID 34580980 JRNL DOI 10.15252/EMBR.202152675 REMARK 2 REMARK 2 RESOLUTION. 2.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 34018 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1708 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 5.9000 - 4.6900 1.00 2758 142 0.1743 0.1940 REMARK 3 2 4.6900 - 4.1000 1.00 2725 145 0.1546 0.2071 REMARK 3 3 4.1000 - 3.7300 1.00 2708 132 0.1755 0.2373 REMARK 3 4 3.7300 - 3.4600 1.00 2706 146 0.1864 0.2678 REMARK 3 5 3.4600 - 3.2500 1.00 2666 149 0.2063 0.2782 REMARK 3 6 3.2500 - 3.0900 1.00 2691 135 0.2199 0.2902 REMARK 3 7 3.0900 - 2.9600 1.00 2680 137 0.2270 0.2793 REMARK 3 8 2.9600 - 2.8400 1.00 2677 135 0.2258 0.3124 REMARK 3 9 2.8400 - 2.7500 1.00 2652 144 0.2376 0.2959 REMARK 3 10 2.7500 - 2.6600 1.00 2655 139 0.2361 0.2853 REMARK 3 11 2.6600 - 2.5800 0.95 2546 139 0.2445 0.2897 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 16.9335 60.9840 95.9169 REMARK 3 T TENSOR REMARK 3 T11: 0.3309 T22: 0.3110 REMARK 3 T33: 0.3656 T12: 0.0267 REMARK 3 T13: -0.0164 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 0.3937 L22: 0.3694 REMARK 3 L33: 1.3510 L12: -0.0289 REMARK 3 L13: -0.1232 L23: -0.2710 REMARK 3 S TENSOR REMARK 3 S11: 0.0235 S12: 0.0430 S13: 0.0105 REMARK 3 S21: 0.0327 S22: -0.0656 S23: -0.0106 REMARK 3 S31: -0.0371 S32: 0.1015 S33: 0.0403 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7L4I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1000253673. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979279 REMARK 200 MONOCHROMATOR : 0.979279 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34086 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.580 REMARK 200 RESOLUTION RANGE LOW (A) : 28.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.65100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6B67 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 1500, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.34400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.48700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.55250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 74.48700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.34400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.55250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 29 REMARK 465 SER A 30 REMARK 465 LYS A 105 REMARK 465 LYS A 106 REMARK 465 ALA A 107 REMARK 465 GLY A 108 REMARK 465 ALA A 109 REMARK 465 VAL A 110 REMARK 465 THR A 111 REMARK 465 SER A 112 REMARK 465 THR A 113 REMARK 465 PRO A 114 REMARK 465 ASN A 115 REMARK 465 ARG A 116 REMARK 465 ASN A 117 REMARK 465 SER A 118 REMARK 465 SER A 119 REMARK 465 LYS A 120 REMARK 465 ARG A 121 REMARK 465 ARG A 122 REMARK 465 SER A 123 REMARK 465 SER A 124 REMARK 465 LEU A 125 REMARK 465 PRO A 126 REMARK 465 ASN A 127 REMARK 465 GLY A 128 REMARK 465 GLU A 129 REMARK 465 GLY A 130 REMARK 465 LEU A 131 REMARK 465 GLN A 132 REMARK 465 LEU A 133 REMARK 465 LYS A 134 REMARK 465 GLU A 135 REMARK 465 ASN A 136 REMARK 465 SER A 137 REMARK 465 GLU A 138 REMARK 465 SER A 139 REMARK 465 GLU A 140 REMARK 465 GLY A 141 REMARK 465 ASN A 218 REMARK 465 SER A 219 REMARK 465 ALA A 220 REMARK 465 VAL A 221 REMARK 465 LEU A 222 REMARK 465 GLY A 223 REMARK 465 SER A 224 REMARK 465 GLY A 225 REMARK 465 SER A 226 REMARK 465 THR A 227 REMARK 465 ARG A 228 REMARK 465 PHE A 229 REMARK 465 PHE A 230 REMARK 465 THR A 231 REMARK 465 GLU A 232 REMARK 465 LYS A 233 REMARK 465 LYS A 234 REMARK 465 SER A 514 REMARK 465 GLY B 29 REMARK 465 SER B 30 REMARK 465 HIS B 31 REMARK 465 MET B 32 REMARK 465 SER B 33 REMARK 465 ASP B 34 REMARK 465 LYS B 104 REMARK 465 LYS B 105 REMARK 465 LYS B 106 REMARK 465 ALA B 107 REMARK 465 GLY B 108 REMARK 465 ALA B 109 REMARK 465 VAL B 110 REMARK 465 THR B 111 REMARK 465 SER B 112 REMARK 465 THR B 113 REMARK 465 PRO B 114 REMARK 465 ASN B 115 REMARK 465 ARG B 116 REMARK 465 ASN B 117 REMARK 465 SER B 118 REMARK 465 SER B 119 REMARK 465 LYS B 120 REMARK 465 ARG B 121 REMARK 465 ARG B 122 REMARK 465 SER B 123 REMARK 465 SER B 124 REMARK 465 LEU B 125 REMARK 465 PRO B 126 REMARK 465 ASN B 127 REMARK 465 GLY B 128 REMARK 465 GLU B 129 REMARK 465 GLY B 130 REMARK 465 LEU B 131 REMARK 465 GLN B 132 REMARK 465 LEU B 133 REMARK 465 LYS B 134 REMARK 465 GLU B 135 REMARK 465 ASN B 136 REMARK 465 SER B 137 REMARK 465 GLU B 138 REMARK 465 SER B 139 REMARK 465 GLU B 140 REMARK 465 ASN B 218 REMARK 465 SER B 219 REMARK 465 ALA B 220 REMARK 465 VAL B 221 REMARK 465 LEU B 222 REMARK 465 GLY B 223 REMARK 465 SER B 224 REMARK 465 GLY B 225 REMARK 465 SER B 226 REMARK 465 THR B 227 REMARK 465 ARG B 228 REMARK 465 SER B 514 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 447 O HOH A 701 2.15 REMARK 500 OD2 ASP A 352 O HOH A 702 2.16 REMARK 500 OE1 GLU A 82 O HOH A 703 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 73 OE1 GLU B 232 3556 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 58 33.61 -85.26 REMARK 500 ASP A 253 173.85 -52.48 REMARK 500 LEU A 254 -53.76 69.83 REMARK 500 ASN A 328 26.23 48.91 REMARK 500 ASP A 365 -57.28 60.02 REMARK 500 LYS A 378 -11.14 -47.31 REMARK 500 THR A 385 -63.00 -122.93 REMARK 500 LYS A 483 -164.38 -102.72 REMARK 500 ILE A 489 -161.03 -107.68 REMARK 500 ALA B 58 45.31 -78.64 REMARK 500 ILE B 265 67.40 -114.73 REMARK 500 ASN B 296 -116.83 56.97 REMARK 500 LYS B 342 38.75 -70.73 REMARK 500 LYS B 347 108.90 68.95 REMARK 500 ILE B 363 99.52 86.01 REMARK 500 GLU B 364 -168.04 -105.81 REMARK 500 THR B 385 -68.96 -124.45 REMARK 500 LYS B 483 -129.32 -117.15 REMARK 500 ILE B 489 -161.71 -106.11 REMARK 500 HIS B 509 4.23 -69.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 600 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 151 OD2 REMARK 620 2 ASP A 437 OD1 89.1 REMARK 620 3 ASP A 498 OD2 170.4 88.7 REMARK 620 4 HOH A 710 O 105.9 112.0 83.5 REMARK 620 5 HOH A 714 O 80.1 86.0 90.5 160.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 151 OD1 REMARK 620 2 GLY A 152 O 90.4 REMARK 620 3 HOH A 711 O 74.0 103.4 REMARK 620 4 HOH A 716 O 168.4 85.6 96.4 REMARK 620 5 HOH A 727 O 86.8 78.8 160.6 103.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 600 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 151 OD1 REMARK 620 2 GLY B 152 O 83.6 REMARK 620 3 HOH B 709 O 80.5 97.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 151 OD2 REMARK 620 2 ASP B 437 OD1 76.1 REMARK 620 3 ASP B 498 OD2 151.1 77.0 REMARK 620 4 HOH B 719 O 78.4 81.3 87.4 REMARK 620 5 HOH B 720 O 91.7 90.2 98.7 168.2 REMARK 620 N 1 2 3 4 DBREF 7L4I A 33 222 UNP Q9ULR3 PPM1H_HUMAN 33 187 DBREF 7L4I A 227 514 UNP Q9ULR3 PPM1H_HUMAN 227 514 DBREF 7L4I B 33 222 UNP Q9ULR3 PPM1H_HUMAN 33 187 DBREF 7L4I B 227 514 UNP Q9ULR3 PPM1H_HUMAN 227 514 SEQADV 7L4I GLY A 29 UNP Q9ULR3 EXPRESSION TAG SEQADV 7L4I SER A 30 UNP Q9ULR3 EXPRESSION TAG SEQADV 7L4I HIS A 31 UNP Q9ULR3 EXPRESSION TAG SEQADV 7L4I MET A 32 UNP Q9ULR3 EXPRESSION TAG SEQADV 7L4I ALA A 56 UNP Q9ULR3 CYS 56 ENGINEERED MUTATION SEQADV 7L4I GLY A 223 UNP Q9ULR3 LINKER SEQADV 7L4I SER A 224 UNP Q9ULR3 LINKER SEQADV 7L4I GLY A 225 UNP Q9ULR3 LINKER SEQADV 7L4I SER A 226 UNP Q9ULR3 LINKER SEQADV 7L4I ALA A 288 UNP Q9ULR3 ASP 288 ENGINEERED MUTATION SEQADV 7L4I GLY B 29 UNP Q9ULR3 EXPRESSION TAG SEQADV 7L4I SER B 30 UNP Q9ULR3 EXPRESSION TAG SEQADV 7L4I HIS B 31 UNP Q9ULR3 EXPRESSION TAG SEQADV 7L4I MET B 32 UNP Q9ULR3 EXPRESSION TAG SEQADV 7L4I ALA B 56 UNP Q9ULR3 CYS 56 ENGINEERED MUTATION SEQADV 7L4I GLY B 223 UNP Q9ULR3 LINKER SEQADV 7L4I SER B 224 UNP Q9ULR3 LINKER SEQADV 7L4I GLY B 225 UNP Q9ULR3 LINKER SEQADV 7L4I SER B 226 UNP Q9ULR3 LINKER SEQADV 7L4I ALA B 288 UNP Q9ULR3 ASP 288 ENGINEERED MUTATION SEQRES 1 A 451 GLY SER HIS MET SER ASP LEU PRO LEU ARG PHE PRO TYR SEQRES 2 A 451 GLY ARG PRO GLU PHE LEU GLY LEU SER GLN ASP GLU VAL SEQRES 3 A 451 GLU ALA SER ALA ASP HIS ILE ALA ARG PRO ILE LEU ILE SEQRES 4 A 451 LEU LYS GLU THR ARG ARG LEU PRO TRP ALA THR GLY TYR SEQRES 5 A 451 ALA GLU VAL ILE ASN ALA GLY LYS SER THR HIS ASN GLU SEQRES 6 A 451 ASP GLN ALA SER CYS GLU VAL LEU THR VAL LYS LYS LYS SEQRES 7 A 451 ALA GLY ALA VAL THR SER THR PRO ASN ARG ASN SER SER SEQRES 8 A 451 LYS ARG ARG SER SER LEU PRO ASN GLY GLU GLY LEU GLN SEQRES 9 A 451 LEU LYS GLU ASN SER GLU SER GLU GLY VAL SER CYS HIS SEQRES 10 A 451 TYR TRP SER LEU PHE ASP GLY HIS ALA GLY SER GLY ALA SEQRES 11 A 451 ALA VAL VAL ALA SER ARG LEU LEU GLN HIS HIS ILE THR SEQRES 12 A 451 GLU GLN LEU GLN ASP ILE VAL ASP ILE LEU LYS ASN SER SEQRES 13 A 451 ALA VAL LEU GLY SER GLY SER THR ARG PHE PHE THR GLU SEQRES 14 A 451 LYS LYS ILE PRO HIS GLU CYS LEU VAL ILE GLY ALA LEU SEQRES 15 A 451 GLU SER ALA PHE LYS GLU MET ASP LEU GLN ILE GLU ARG SEQRES 16 A 451 GLU ARG SER SER TYR ASN ILE SER GLY GLY CYS THR ALA SEQRES 17 A 451 LEU ILE VAL ILE CYS LEU LEU GLY LYS LEU TYR VAL ALA SEQRES 18 A 451 ASN ALA GLY ALA SER ARG ALA ILE ILE ILE ARG ASN GLY SEQRES 19 A 451 GLU ILE ILE PRO MET SER SER GLU PHE THR PRO GLU THR SEQRES 20 A 451 GLU ARG GLN ARG LEU GLN TYR LEU ALA PHE MET GLN PRO SEQRES 21 A 451 HIS LEU LEU GLY ASN GLU PHE THR HIS LEU GLU PHE PRO SEQRES 22 A 451 ARG ARG VAL GLN ARG LYS GLU LEU GLY LYS LYS MET LEU SEQRES 23 A 451 TYR ARG ASP PHE ASN MET THR GLY TRP ALA TYR LYS THR SEQRES 24 A 451 ILE GLU ASP GLU ASP LEU LYS PHE PRO LEU ILE TYR GLY SEQRES 25 A 451 GLU GLY LYS LYS ALA ARG VAL MET ALA THR ILE GLY VAL SEQRES 26 A 451 THR ARG GLY LEU GLY ASP HIS ASP LEU LYS VAL HIS ASP SEQRES 27 A 451 SER ASN ILE TYR ILE LYS PRO PHE LEU SER SER ALA PRO SEQRES 28 A 451 GLU VAL ARG ILE TYR ASP LEU SER LYS TYR ASP HIS GLY SEQRES 29 A 451 SER ASP ASP VAL LEU ILE LEU ALA THR ASP GLY LEU TRP SEQRES 30 A 451 ASP VAL LEU SER ASN GLU GLU VAL ALA GLU ALA ILE THR SEQRES 31 A 451 GLN PHE LEU PRO ASN CYS ASP PRO ASP ASP PRO HIS ARG SEQRES 32 A 451 TYR THR LEU ALA ALA GLN ASP LEU VAL MET ARG ALA ARG SEQRES 33 A 451 GLY VAL LEU LYS ASP ARG GLY TRP ARG ILE SER ASN ASP SEQRES 34 A 451 ARG LEU GLY SER GLY ASP ASP ILE SER VAL TYR VAL ILE SEQRES 35 A 451 PRO LEU ILE HIS GLY ASN LYS LEU SER SEQRES 1 B 451 GLY SER HIS MET SER ASP LEU PRO LEU ARG PHE PRO TYR SEQRES 2 B 451 GLY ARG PRO GLU PHE LEU GLY LEU SER GLN ASP GLU VAL SEQRES 3 B 451 GLU ALA SER ALA ASP HIS ILE ALA ARG PRO ILE LEU ILE SEQRES 4 B 451 LEU LYS GLU THR ARG ARG LEU PRO TRP ALA THR GLY TYR SEQRES 5 B 451 ALA GLU VAL ILE ASN ALA GLY LYS SER THR HIS ASN GLU SEQRES 6 B 451 ASP GLN ALA SER CYS GLU VAL LEU THR VAL LYS LYS LYS SEQRES 7 B 451 ALA GLY ALA VAL THR SER THR PRO ASN ARG ASN SER SER SEQRES 8 B 451 LYS ARG ARG SER SER LEU PRO ASN GLY GLU GLY LEU GLN SEQRES 9 B 451 LEU LYS GLU ASN SER GLU SER GLU GLY VAL SER CYS HIS SEQRES 10 B 451 TYR TRP SER LEU PHE ASP GLY HIS ALA GLY SER GLY ALA SEQRES 11 B 451 ALA VAL VAL ALA SER ARG LEU LEU GLN HIS HIS ILE THR SEQRES 12 B 451 GLU GLN LEU GLN ASP ILE VAL ASP ILE LEU LYS ASN SER SEQRES 13 B 451 ALA VAL LEU GLY SER GLY SER THR ARG PHE PHE THR GLU SEQRES 14 B 451 LYS LYS ILE PRO HIS GLU CYS LEU VAL ILE GLY ALA LEU SEQRES 15 B 451 GLU SER ALA PHE LYS GLU MET ASP LEU GLN ILE GLU ARG SEQRES 16 B 451 GLU ARG SER SER TYR ASN ILE SER GLY GLY CYS THR ALA SEQRES 17 B 451 LEU ILE VAL ILE CYS LEU LEU GLY LYS LEU TYR VAL ALA SEQRES 18 B 451 ASN ALA GLY ALA SER ARG ALA ILE ILE ILE ARG ASN GLY SEQRES 19 B 451 GLU ILE ILE PRO MET SER SER GLU PHE THR PRO GLU THR SEQRES 20 B 451 GLU ARG GLN ARG LEU GLN TYR LEU ALA PHE MET GLN PRO SEQRES 21 B 451 HIS LEU LEU GLY ASN GLU PHE THR HIS LEU GLU PHE PRO SEQRES 22 B 451 ARG ARG VAL GLN ARG LYS GLU LEU GLY LYS LYS MET LEU SEQRES 23 B 451 TYR ARG ASP PHE ASN MET THR GLY TRP ALA TYR LYS THR SEQRES 24 B 451 ILE GLU ASP GLU ASP LEU LYS PHE PRO LEU ILE TYR GLY SEQRES 25 B 451 GLU GLY LYS LYS ALA ARG VAL MET ALA THR ILE GLY VAL SEQRES 26 B 451 THR ARG GLY LEU GLY ASP HIS ASP LEU LYS VAL HIS ASP SEQRES 27 B 451 SER ASN ILE TYR ILE LYS PRO PHE LEU SER SER ALA PRO SEQRES 28 B 451 GLU VAL ARG ILE TYR ASP LEU SER LYS TYR ASP HIS GLY SEQRES 29 B 451 SER ASP ASP VAL LEU ILE LEU ALA THR ASP GLY LEU TRP SEQRES 30 B 451 ASP VAL LEU SER ASN GLU GLU VAL ALA GLU ALA ILE THR SEQRES 31 B 451 GLN PHE LEU PRO ASN CYS ASP PRO ASP ASP PRO HIS ARG SEQRES 32 B 451 TYR THR LEU ALA ALA GLN ASP LEU VAL MET ARG ALA ARG SEQRES 33 B 451 GLY VAL LEU LYS ASP ARG GLY TRP ARG ILE SER ASN ASP SEQRES 34 B 451 ARG LEU GLY SER GLY ASP ASP ILE SER VAL TYR VAL ILE SEQRES 35 B 451 PRO LEU ILE HIS GLY ASN LYS LEU SER HET MG A 600 1 HET MG A 601 1 HET MG B 600 1 HET MG B 601 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 4(MG 2+) FORMUL 7 HOH *91(H2 O) HELIX 1 AA1 HIS A 31 LEU A 35 5 5 HELIX 2 AA2 PRO A 44 GLY A 48 5 5 HELIX 3 AA3 SER A 50 ALA A 58 1 9 HELIX 4 AA4 LEU A 74 THR A 78 5 5 HELIX 5 AA5 SER A 156 ASP A 176 1 21 HELIX 6 AA6 ILE A 177 LYS A 182 5 6 HELIX 7 AA7 PRO A 236 ARG A 260 1 25 HELIX 8 AA8 GLU A 311 GLN A 322 1 12 HELIX 9 AA9 PRO A 323 GLY A 327 5 5 HELIX 10 AB1 GLN A 340 LEU A 344 5 5 HELIX 11 AB2 ASP A 365 LYS A 369 5 5 HELIX 12 AB3 GLU A 376 ALA A 380 5 5 HELIX 13 AB4 ILE A 406 LEU A 410 5 5 HELIX 14 AB5 SER A 422 TYR A 424 5 3 HELIX 15 AB6 THR A 436 ASP A 441 1 6 HELIX 16 AB7 SER A 444 LEU A 456 1 13 HELIX 17 AB8 PRO A 457 CYS A 459 5 3 HELIX 18 AB9 HIS A 465 GLY A 480 1 16 HELIX 19 AC1 ILE A 489 ARG A 493 5 5 HELIX 20 AC2 ILE A 508 ASN A 511 5 4 HELIX 21 AC3 PRO B 44 GLY B 48 5 5 HELIX 22 AC4 SER B 50 ALA B 58 1 9 HELIX 23 AC5 LEU B 74 THR B 78 5 5 HELIX 24 AC6 SER B 156 ASP B 176 1 21 HELIX 25 AC7 PRO B 236 ARG B 260 1 25 HELIX 26 AC8 GLU B 311 GLN B 322 1 12 HELIX 27 AC9 PRO B 323 GLY B 327 5 5 HELIX 28 AD1 GLN B 340 LEU B 344 5 5 HELIX 29 AD2 GLU B 364 LYS B 369 5 6 HELIX 30 AD3 GLU B 376 ALA B 380 5 5 HELIX 31 AD4 ILE B 406 LEU B 410 5 5 HELIX 32 AD5 SER B 422 TYR B 424 5 3 HELIX 33 AD6 THR B 436 ASP B 441 1 6 HELIX 34 AD7 SER B 444 LEU B 456 1 13 HELIX 35 AD8 PRO B 457 CYS B 459 5 3 HELIX 36 AD9 HIS B 465 GLY B 480 1 16 HELIX 37 AE1 ILE B 489 ARG B 493 5 5 HELIX 38 AE2 ILE B 508 ASN B 511 5 4 SHEET 1 AA1 6 LEU A 66 ILE A 67 0 SHEET 2 AA1 6 GLY A 79 VAL A 83 -1 O GLU A 82 N LEU A 66 SHEET 3 AA1 6 ILE A 500 PRO A 506 -1 O VAL A 504 N GLY A 79 SHEET 4 AA1 6 VAL A 431 ALA A 435 -1 N LEU A 434 O TYR A 503 SHEET 5 AA1 6 ARG A 290 ARG A 295 -1 N ILE A 292 O ILE A 433 SHEET 6 AA1 6 GLU A 298 PRO A 301 -1 O ILE A 300 N ILE A 293 SHEET 1 AA2 4 ASP A 94 THR A 102 0 SHEET 2 AA2 4 SER A 143 HIS A 153 -1 O PHE A 150 N GLN A 95 SHEET 3 AA2 4 GLY A 268 LEU A 277 -1 O LEU A 272 N LEU A 149 SHEET 4 AA2 4 LEU A 392 GLY A 393 -1 O LEU A 392 N CYS A 269 SHEET 1 AA3 5 ASP A 94 THR A 102 0 SHEET 2 AA3 5 SER A 143 HIS A 153 -1 O PHE A 150 N GLN A 95 SHEET 3 AA3 5 GLY A 268 LEU A 277 -1 O LEU A 272 N LEU A 149 SHEET 4 AA3 5 LYS A 280 ALA A 286 -1 O ALA A 284 N ILE A 273 SHEET 5 AA3 5 GLU A 415 ASP A 420 -1 O ARG A 417 N VAL A 283 SHEET 1 AA4 2 PHE A 330 THR A 331 0 SHEET 2 AA4 2 PHE A 370 PRO A 371 1 O PHE A 370 N THR A 331 SHEET 1 AA5 2 LYS A 347 TYR A 350 0 SHEET 2 AA5 2 ALA A 359 THR A 362 -1 O LYS A 361 N MET A 348 SHEET 1 AA6 2 ILE A 373 TYR A 374 0 SHEET 2 AA6 2 ARG A 381 VAL A 382 -1 O ARG A 381 N TYR A 374 SHEET 1 AA7 2 VAL A 481 LYS A 483 0 SHEET 2 AA7 2 GLY A 486 ARG A 488 -1 O GLY A 486 N LYS A 483 SHEET 1 AA8 6 LEU B 66 ILE B 67 0 SHEET 2 AA8 6 GLY B 79 VAL B 83 -1 O GLU B 82 N LEU B 66 SHEET 3 AA8 6 ILE B 500 PRO B 506 -1 O VAL B 504 N GLY B 79 SHEET 4 AA8 6 VAL B 431 ALA B 435 -1 N LEU B 432 O ILE B 505 SHEET 5 AA8 6 ARG B 290 ARG B 295 -1 N ILE B 292 O ILE B 433 SHEET 6 AA8 6 GLU B 298 PRO B 301 -1 O GLU B 298 N ARG B 295 SHEET 1 AA9 4 ASP B 94 THR B 102 0 SHEET 2 AA9 4 SER B 143 HIS B 153 -1 O PHE B 150 N GLN B 95 SHEET 3 AA9 4 GLY B 268 CYS B 276 -1 O LEU B 272 N LEU B 149 SHEET 4 AA9 4 LEU B 392 GLY B 393 -1 O LEU B 392 N CYS B 269 SHEET 1 AB1 5 ASP B 94 THR B 102 0 SHEET 2 AB1 5 SER B 143 HIS B 153 -1 O PHE B 150 N GLN B 95 SHEET 3 AB1 5 GLY B 268 CYS B 276 -1 O LEU B 272 N LEU B 149 SHEET 4 AB1 5 LYS B 280 ALA B 286 -1 O TYR B 282 N ILE B 275 SHEET 5 AB1 5 GLU B 415 ASP B 420 -1 O TYR B 419 N LEU B 281 SHEET 1 AB2 2 PHE B 330 THR B 331 0 SHEET 2 AB2 2 PHE B 370 PRO B 371 1 O PHE B 370 N THR B 331 SHEET 1 AB3 2 MET B 348 TYR B 350 0 SHEET 2 AB3 2 ALA B 359 LYS B 361 -1 O LYS B 361 N MET B 348 SHEET 1 AB4 2 ILE B 373 TYR B 374 0 SHEET 2 AB4 2 ARG B 381 VAL B 382 -1 O ARG B 381 N TYR B 374 SHEET 1 AB5 2 VAL B 481 LEU B 482 0 SHEET 2 AB5 2 TRP B 487 ARG B 488 -1 O ARG B 488 N VAL B 481 LINK OD2 ASP A 151 MG MG A 600 1555 1555 1.96 LINK OD1 ASP A 151 MG MG A 601 1555 1555 2.03 LINK O GLY A 152 MG MG A 601 1555 1555 2.50 LINK OD1 ASP A 437 MG MG A 600 1555 1555 2.11 LINK OD2 ASP A 498 MG MG A 600 1555 1555 1.91 LINK MG MG A 600 O HOH A 710 1555 1555 2.08 LINK MG MG A 600 O HOH A 714 1555 1555 2.08 LINK MG MG A 601 O HOH A 711 1555 1555 2.55 LINK MG MG A 601 O HOH A 716 1555 1555 2.50 LINK MG MG A 601 O HOH A 727 1555 1555 1.95 LINK OD1 ASP B 151 MG MG B 600 1555 1555 1.99 LINK OD2 ASP B 151 MG MG B 601 1555 1555 2.18 LINK O GLY B 152 MG MG B 600 1555 1555 2.38 LINK OD1 ASP B 437 MG MG B 601 1555 1555 2.50 LINK OD2 ASP B 498 MG MG B 601 1555 1555 2.15 LINK MG MG B 600 O HOH B 709 1555 1555 2.47 LINK MG MG B 601 O HOH B 719 1555 1555 2.08 LINK MG MG B 601 O HOH B 720 1555 1555 2.14 CISPEP 1 SER B 266 GLY B 267 0 -27.73 CRYST1 70.688 101.105 148.974 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014147 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009891 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006713 0.00000