HEADER HYDROLASE 22-DEC-20 7L5R TITLE CRYSTAL STRUCTURE OF THE OXACILLIN-HYDROLYZING CLASS D EXTENDED- TITLE 2 SPECTRUM BETA-LACTAMASE OXA-14 FROM PSEUDOMONAS AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: OXA-14 BETA-LACTAMASE; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: THE SIDE CHAIN OF LYS-70 IS N-CARBOXYLATED; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: BETA-LACTAMASE; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: OXA-14 BETA-LACTAMASE; COMPND 12 EC: 3.5.2.6; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: OXA-14, BLAOXA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL-21 MAGIC; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG53; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 12 ORGANISM_TAXID: 287; SOURCE 13 GENE: OXA-14, BLAOXA; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL-21 MAGIC; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, CLASS D BETA-LACTAMASE, OXA-14, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,M.ROSAS-LEMUS,J.S.BRUNZELLE,K.J.F.SATCHELL, AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 4 15-NOV-23 7L5R 1 REMARK REVDAT 3 25-OCT-23 7L5R 1 REMARK REVDAT 2 14-JUN-23 7L5R 1 JRNL REVDAT 1 29-DEC-21 7L5R 0 JRNL AUTH N.B.PINCUS,M.ROSAS-LEMUS,S.W.M.GATESY,H.K.BERTUCCI, JRNL AUTH 2 J.S.BRUNZELLE,G.MINASOV,L.A.SHUVALOVA,M.LEBRUN-CORBIN, JRNL AUTH 3 K.J.F.SATCHELL,E.A.OZER,A.R.HAUSER,K.E.R.BACHTA JRNL TITL FUNCTIONAL AND STRUCTURAL CHARACTERIZATION OF OXA-935, A JRNL TITL 2 NOVEL OXA-10-FAMILY BETA-LACTAMASE FROM PSEUDOMONAS JRNL TITL 3 AERUGINOSA. JRNL REF ANTIMICROB.AGENTS CHEMOTHER. V. 66 98522 2022 JRNL REFN ESSN 1098-6596 JRNL PMID 36129295 JRNL DOI 10.1128/AAC.00985-22 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 68142 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3543 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4889 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.2450 REMARK 3 BIN FREE R VALUE SET COUNT : 237 REMARK 3 BIN FREE R VALUE : 0.2590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3811 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 128 REMARK 3 SOLVENT ATOMS : 484 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.15000 REMARK 3 B22 (A**2) : 1.20000 REMARK 3 B33 (A**2) : -1.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.083 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.058 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.517 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4111 ; 0.006 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3729 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5582 ; 1.336 ; 1.629 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8712 ; 0.351 ; 1.574 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 506 ; 4.123 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 198 ;32.494 ;24.242 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 725 ;10.226 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;15.855 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 521 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4508 ; 0.057 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 813 ; 0.053 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 19 A 38 REMARK 3 ORIGIN FOR THE GROUP (A): -21.5902 -3.4884 -15.0693 REMARK 3 T TENSOR REMARK 3 T11: 0.1364 T22: 0.1409 REMARK 3 T33: 0.1028 T12: -0.0591 REMARK 3 T13: -0.0188 T23: -0.0427 REMARK 3 L TENSOR REMARK 3 L11: 4.7361 L22: 2.8578 REMARK 3 L33: 1.9790 L12: -0.5336 REMARK 3 L13: -2.1742 L23: 0.4803 REMARK 3 S TENSOR REMARK 3 S11: -0.1234 S12: 0.0367 S13: -0.4928 REMARK 3 S21: -0.1709 S22: -0.0760 S23: 0.3739 REMARK 3 S31: 0.1760 S32: -0.0891 S33: 0.1994 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 39 A 83 REMARK 3 ORIGIN FOR THE GROUP (A): -11.0592 6.2459 -5.4840 REMARK 3 T TENSOR REMARK 3 T11: 0.0247 T22: 0.0743 REMARK 3 T33: 0.0313 T12: -0.0159 REMARK 3 T13: 0.0212 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 0.5196 L22: 1.1780 REMARK 3 L33: 2.2056 L12: 0.2002 REMARK 3 L13: 0.5113 L23: 0.7373 REMARK 3 S TENSOR REMARK 3 S11: -0.0568 S12: 0.0828 S13: -0.0466 REMARK 3 S21: -0.0653 S22: 0.0541 S23: -0.0604 REMARK 3 S31: 0.0571 S32: 0.0943 S33: 0.0026 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 84 A 107 REMARK 3 ORIGIN FOR THE GROUP (A): -17.5280 19.3746 15.0462 REMARK 3 T TENSOR REMARK 3 T11: 0.0362 T22: 0.0965 REMARK 3 T33: 0.0017 T12: 0.0192 REMARK 3 T13: 0.0010 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 5.5175 L22: 3.8666 REMARK 3 L33: 3.4516 L12: -3.6583 REMARK 3 L13: 2.8426 L23: -2.0954 REMARK 3 S TENSOR REMARK 3 S11: -0.2685 S12: -0.2868 S13: 0.0365 REMARK 3 S21: 0.3433 S22: 0.2284 S23: 0.0121 REMARK 3 S31: -0.2316 S32: -0.2502 S33: 0.0401 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 108 A 203 REMARK 3 ORIGIN FOR THE GROUP (A): -8.2177 11.1290 1.5379 REMARK 3 T TENSOR REMARK 3 T11: 0.0106 T22: 0.0706 REMARK 3 T33: 0.0254 T12: -0.0072 REMARK 3 T13: 0.0003 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.6479 L22: 0.5758 REMARK 3 L33: 1.2489 L12: 0.1886 REMARK 3 L13: -0.1710 L23: 0.0478 REMARK 3 S TENSOR REMARK 3 S11: -0.0418 S12: -0.0142 S13: -0.0334 REMARK 3 S21: -0.0490 S22: 0.0516 S23: -0.0638 REMARK 3 S31: 0.0233 S32: 0.0343 S33: -0.0098 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 204 A 240 REMARK 3 ORIGIN FOR THE GROUP (A): -18.4483 3.9851 -4.3039 REMARK 3 T TENSOR REMARK 3 T11: 0.0290 T22: 0.0639 REMARK 3 T33: 0.0162 T12: -0.0352 REMARK 3 T13: 0.0120 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 2.3663 L22: 3.3113 REMARK 3 L33: 2.0532 L12: -2.0708 REMARK 3 L13: 1.1002 L23: -1.1527 REMARK 3 S TENSOR REMARK 3 S11: -0.0417 S12: 0.0014 S13: -0.0850 REMARK 3 S21: 0.0012 S22: 0.0077 S23: 0.0681 REMARK 3 S31: 0.1172 S32: -0.1168 S33: 0.0340 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 241 A 265 REMARK 3 ORIGIN FOR THE GROUP (A): -26.1358 0.7821 -4.2609 REMARK 3 T TENSOR REMARK 3 T11: 0.0304 T22: 0.0726 REMARK 3 T33: 0.0365 T12: -0.0449 REMARK 3 T13: 0.0101 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 1.6795 L22: 7.5941 REMARK 3 L33: 1.2821 L12: -2.4447 REMARK 3 L13: 0.6363 L23: -1.7242 REMARK 3 S TENSOR REMARK 3 S11: 0.0015 S12: -0.0445 S13: -0.1633 REMARK 3 S21: 0.0625 S22: 0.0589 S23: 0.3107 REMARK 3 S31: 0.1023 S32: -0.2242 S33: -0.0604 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 19 B 68 REMARK 3 ORIGIN FOR THE GROUP (A): -19.8231 -5.1468 36.3704 REMARK 3 T TENSOR REMARK 3 T11: 0.0511 T22: 0.1901 REMARK 3 T33: 0.0333 T12: -0.0435 REMARK 3 T13: -0.0008 T23: 0.0335 REMARK 3 L TENSOR REMARK 3 L11: 1.0371 L22: 2.7334 REMARK 3 L33: 3.1097 L12: 0.4867 REMARK 3 L13: 0.1861 L23: -0.2461 REMARK 3 S TENSOR REMARK 3 S11: 0.0834 S12: -0.1397 S13: -0.0397 REMARK 3 S21: 0.1787 S22: -0.1179 S23: 0.1486 REMARK 3 S31: -0.0415 S32: -0.4716 S33: 0.0345 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 69 B 111 REMARK 3 ORIGIN FOR THE GROUP (A): -1.2203 -12.2657 13.8527 REMARK 3 T TENSOR REMARK 3 T11: 0.1333 T22: 0.0656 REMARK 3 T33: 0.1475 T12: 0.0657 REMARK 3 T13: 0.0994 T23: 0.0323 REMARK 3 L TENSOR REMARK 3 L11: 2.2967 L22: 2.8531 REMARK 3 L33: 3.4981 L12: 0.1820 REMARK 3 L13: 0.6780 L23: -0.6668 REMARK 3 S TENSOR REMARK 3 S11: -0.0320 S12: 0.1911 S13: -0.2941 REMARK 3 S21: -0.4810 S22: -0.1664 S23: -0.3054 REMARK 3 S31: 0.4793 S32: 0.3168 S33: 0.1985 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 112 B 131 REMARK 3 ORIGIN FOR THE GROUP (A): -0.3212 -18.3172 19.6029 REMARK 3 T TENSOR REMARK 3 T11: 0.1558 T22: 0.0570 REMARK 3 T33: 0.1741 T12: 0.0453 REMARK 3 T13: 0.0621 T23: 0.0369 REMARK 3 L TENSOR REMARK 3 L11: 5.7483 L22: 3.2377 REMARK 3 L33: 4.6245 L12: -1.9491 REMARK 3 L13: 1.8835 L23: -1.5015 REMARK 3 S TENSOR REMARK 3 S11: 0.1467 S12: 0.2207 S13: -0.6299 REMARK 3 S21: -0.4219 S22: -0.0160 S23: 0.0395 REMARK 3 S31: 0.6859 S32: 0.1477 S33: -0.1307 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 132 B 192 REMARK 3 ORIGIN FOR THE GROUP (A): -2.5245 -8.3331 27.7784 REMARK 3 T TENSOR REMARK 3 T11: 0.0187 T22: 0.0857 REMARK 3 T33: 0.1327 T12: 0.0014 REMARK 3 T13: -0.0051 T23: 0.0752 REMARK 3 L TENSOR REMARK 3 L11: 1.2855 L22: 1.8746 REMARK 3 L33: 3.0764 L12: 0.1985 REMARK 3 L13: -0.6707 L23: -0.9479 REMARK 3 S TENSOR REMARK 3 S11: -0.0697 S12: -0.0917 S13: -0.2023 REMARK 3 S21: -0.0020 S22: -0.1651 S23: -0.3560 REMARK 3 S31: 0.1917 S32: 0.2204 S33: 0.2348 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 193 B 243 REMARK 3 ORIGIN FOR THE GROUP (A): -18.0609 -8.0973 25.5890 REMARK 3 T TENSOR REMARK 3 T11: 0.0529 T22: 0.1597 REMARK 3 T33: 0.0569 T12: -0.0419 REMARK 3 T13: -0.0021 T23: 0.0297 REMARK 3 L TENSOR REMARK 3 L11: 0.6206 L22: 1.9620 REMARK 3 L33: 2.8508 L12: 0.4487 REMARK 3 L13: 0.0150 L23: -1.2520 REMARK 3 S TENSOR REMARK 3 S11: 0.0020 S12: -0.0008 S13: -0.0982 REMARK 3 S21: -0.0960 S22: -0.0320 S23: 0.0030 REMARK 3 S31: 0.2320 S32: -0.3663 S33: 0.0300 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 244 B 265 REMARK 3 ORIGIN FOR THE GROUP (A): -25.8148 -9.0410 26.0412 REMARK 3 T TENSOR REMARK 3 T11: 0.0367 T22: 0.1853 REMARK 3 T33: 0.0300 T12: -0.0635 REMARK 3 T13: -0.0278 T23: 0.0438 REMARK 3 L TENSOR REMARK 3 L11: 1.6107 L22: 10.0652 REMARK 3 L33: 1.9565 L12: -1.2502 REMARK 3 L13: 1.0173 L23: -2.1912 REMARK 3 S TENSOR REMARK 3 S11: 0.0570 S12: -0.0447 S13: -0.0532 REMARK 3 S21: -0.3667 S22: 0.1466 S23: 0.3535 REMARK 3 S31: 0.2396 S32: -0.4128 S33: -0.2036 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7L5R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1000253765. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAY-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : BE REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71761 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 27.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.84100 REMARK 200 R SYM FOR SHELL (I) : 0.84100 REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1E3U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 8.0 MG/ML, 0.01M TRIS PH 8.3; REMARK 280 SCREEN, AMSO4 (F6): 0.1M BICINE PH 9.0, 2.4M AMMONIUM SULFATE; REMARK 280 CRYO: 2M LITHIUM SULFATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.40650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.56850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.17300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.56850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.40650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.17300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -243.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 266 REMARK 465 TRP B 92 REMARK 465 ASP B 93 REMARK 465 GLY B 94 REMARK 465 LYS B 95 REMARK 465 PRO B 96 REMARK 465 ARG B 97 REMARK 465 ALA B 98 REMARK 465 MET B 99 REMARK 465 LYS B 100 REMARK 465 GLN B 101 REMARK 465 TRP B 102 REMARK 465 GLY B 266 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 46 -47.78 78.70 REMARK 500 ALA A 66 -140.27 53.15 REMARK 500 LYS A 152 5.02 -154.55 REMARK 500 GLU A 156 7.52 -156.09 REMARK 500 ASP A 157 -131.65 -109.77 REMARK 500 ASP A 157 -133.44 -109.77 REMARK 500 ALA B 66 -136.63 50.92 REMARK 500 ASP B 105 33.32 -94.59 REMARK 500 LYS B 152 10.90 -161.27 REMARK 500 GLU B 229 -129.92 53.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP97990 RELATED DB: TARGETTRACK DBREF 7L5R A 21 266 UNP Q59648 Q59648_PSEAI 12 257 DBREF 7L5R B 21 266 UNP Q59648 Q59648_PSEAI 12 257 SEQADV 7L5R SER A 19 UNP Q59648 EXPRESSION TAG SEQADV 7L5R ASN A 20 UNP Q59648 EXPRESSION TAG SEQADV 7L5R SER B 19 UNP Q59648 EXPRESSION TAG SEQADV 7L5R ASN B 20 UNP Q59648 EXPRESSION TAG SEQRES 1 A 248 SER ASN SER ILE THR GLU ASN THR SER TRP ASN LYS GLU SEQRES 2 A 248 PHE SER ALA GLU ALA VAL ASN GLY VAL PHE VAL LEU CYS SEQRES 3 A 248 LYS SER SER SER LYS SER CYS ALA THR ASN ASP LEU ALA SEQRES 4 A 248 ARG ALA SER LYS GLU TYR LEU PRO ALA SER THR PHE KCX SEQRES 5 A 248 ILE PRO ASN ALA ILE ILE GLY LEU GLU THR GLY VAL ILE SEQRES 6 A 248 LYS ASN GLU HIS GLN VAL PHE LYS TRP ASP GLY LYS PRO SEQRES 7 A 248 ARG ALA MET LYS GLN TRP GLU ARG ASP LEU THR LEU ARG SEQRES 8 A 248 GLY ALA ILE GLN VAL SER ALA VAL PRO VAL PHE GLN GLN SEQRES 9 A 248 ILE ALA ARG GLU VAL GLY GLU VAL ARG MET GLN LYS TYR SEQRES 10 A 248 LEU LYS LYS PHE SER TYR GLY ASN GLN ASN ILE SER GLY SEQRES 11 A 248 GLY ILE ASP LYS PHE TRP LEU GLU ASP GLN LEU ARG ILE SEQRES 12 A 248 SER ALA VAL ASN GLN VAL GLU PHE LEU GLU SER LEU TYR SEQRES 13 A 248 LEU ASN LYS LEU SER ALA SER LYS GLU ASN GLN LEU ILE SEQRES 14 A 248 VAL LYS GLU ALA LEU VAL THR GLU ALA ALA PRO GLU TYR SEQRES 15 A 248 LEU VAL HIS SER LYS THR GLY PHE SER GLY VAL GLY THR SEQRES 16 A 248 GLU SER ASN PRO GLY VAL ALA TRP TRP VAL GLY TRP VAL SEQRES 17 A 248 GLU LYS GLU THR GLU VAL TYR PHE PHE ALA PHE ASN MET SEQRES 18 A 248 ASP ILE ASP ASN GLU SER LYS LEU PRO LEU ARG LYS SER SEQRES 19 A 248 ILE PRO THR LYS ILE MET GLU SER GLU GLY ILE ILE GLY SEQRES 20 A 248 GLY SEQRES 1 B 248 SER ASN SER ILE THR GLU ASN THR SER TRP ASN LYS GLU SEQRES 2 B 248 PHE SER ALA GLU ALA VAL ASN GLY VAL PHE VAL LEU CYS SEQRES 3 B 248 LYS SER SER SER LYS SER CYS ALA THR ASN ASP LEU ALA SEQRES 4 B 248 ARG ALA SER LYS GLU TYR LEU PRO ALA SER THR PHE LYS SEQRES 5 B 248 ILE PRO ASN ALA ILE ILE GLY LEU GLU THR GLY VAL ILE SEQRES 6 B 248 LYS ASN GLU HIS GLN VAL PHE LYS TRP ASP GLY LYS PRO SEQRES 7 B 248 ARG ALA MET LYS GLN TRP GLU ARG ASP LEU THR LEU ARG SEQRES 8 B 248 GLY ALA ILE GLN VAL SER ALA VAL PRO VAL PHE GLN GLN SEQRES 9 B 248 ILE ALA ARG GLU VAL GLY GLU VAL ARG MET GLN LYS TYR SEQRES 10 B 248 LEU LYS LYS PHE SER TYR GLY ASN GLN ASN ILE SER GLY SEQRES 11 B 248 GLY ILE ASP LYS PHE TRP LEU GLU ASP GLN LEU ARG ILE SEQRES 12 B 248 SER ALA VAL ASN GLN VAL GLU PHE LEU GLU SER LEU TYR SEQRES 13 B 248 LEU ASN LYS LEU SER ALA SER LYS GLU ASN GLN LEU ILE SEQRES 14 B 248 VAL LYS GLU ALA LEU VAL THR GLU ALA ALA PRO GLU TYR SEQRES 15 B 248 LEU VAL HIS SER LYS THR GLY PHE SER GLY VAL GLY THR SEQRES 16 B 248 GLU SER ASN PRO GLY VAL ALA TRP TRP VAL GLY TRP VAL SEQRES 17 B 248 GLU LYS GLU THR GLU VAL TYR PHE PHE ALA PHE ASN MET SEQRES 18 B 248 ASP ILE ASP ASN GLU SER LYS LEU PRO LEU ARG LYS SER SEQRES 19 B 248 ILE PRO THR LYS ILE MET GLU SER GLU GLY ILE ILE GLY SEQRES 20 B 248 GLY MODRES 7L5R KCX A 70 LYS MODIFIED RESIDUE HET KCX A 70 12 HET GOL A 301 6 HET GOL A 302 6 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 A 306 5 HET SO4 A 307 5 HET SO4 A 308 5 HET SO4 A 309 5 HET SO4 A 310 5 HET SO4 A 311 5 HET SO4 A 312 5 HET SO4 A 313 5 HET SO4 A 314 5 HET GOL B 301 6 HET SO4 B 302 5 HET SO4 B 303 5 HET SO4 B 304 5 HET SO4 B 305 5 HET SO4 B 306 5 HET SO4 B 307 5 HET SO4 B 308 5 HET SO4 B 309 5 HET SO4 B 310 5 HET SO4 B 311 5 HETNAM KCX LYSINE NZ-CARBOXYLIC ACID HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 KCX C7 H14 N2 O4 FORMUL 3 GOL 3(C3 H8 O3) FORMUL 5 SO4 22(O4 S 2-) FORMUL 28 HOH *484(H2 O) HELIX 1 AA1 TRP A 28 ALA A 34 1 7 HELIX 2 AA2 ASP A 55 SER A 60 1 6 HELIX 3 AA3 PRO A 65 THR A 68 5 4 HELIX 4 AA4 PHE A 69 THR A 80 1 12 HELIX 5 AA5 MET A 99 GLU A 103 5 5 HELIX 6 AA6 THR A 107 VAL A 114 1 8 HELIX 7 AA7 ALA A 116 PHE A 139 1 24 HELIX 8 AA8 LYS A 152 ASP A 157 1 6 HELIX 9 AA9 SER A 162 LEU A 175 1 14 HELIX 10 AB1 SER A 181 LEU A 192 1 12 HELIX 11 AB2 ASN A 243 LEU A 247 5 5 HELIX 12 AB3 PRO A 248 GLU A 261 1 14 HELIX 13 AB4 TRP B 28 ALA B 34 1 7 HELIX 14 AB5 ASP B 55 LYS B 61 1 7 HELIX 15 AB6 PRO B 65 THR B 68 5 4 HELIX 16 AB7 PHE B 69 THR B 80 1 12 HELIX 17 AB8 THR B 107 VAL B 114 1 8 HELIX 18 AB9 ALA B 116 GLY B 128 1 13 HELIX 19 AC1 GLY B 128 PHE B 139 1 12 HELIX 20 AC2 SER B 162 LEU B 175 1 14 HELIX 21 AC3 SER B 181 LEU B 192 1 12 HELIX 22 AC4 ASN B 243 LEU B 247 5 5 HELIX 23 AC5 PRO B 248 GLU B 261 1 14 SHEET 1 AA1 7 SER A 21 GLU A 24 0 SHEET 2 AA1 7 SER A 50 THR A 53 1 O CYS A 51 N THR A 23 SHEET 3 AA1 7 GLY A 39 LYS A 45 -1 N LEU A 43 O ALA A 52 SHEET 4 AA1 7 VAL A 232 ILE A 241 -1 O PHE A 234 N CYS A 44 SHEET 5 AA1 7 GLY A 218 LYS A 228 -1 N GLY A 224 O PHE A 235 SHEET 6 AA1 7 TYR A 200 PHE A 208 -1 N GLY A 207 O TRP A 221 SHEET 7 AA1 7 VAL A 193 ALA A 196 -1 N GLU A 195 O VAL A 202 SHEET 1 AA2 7 SER B 21 GLU B 24 0 SHEET 2 AA2 7 SER B 50 THR B 53 1 O CYS B 51 N SER B 21 SHEET 3 AA2 7 GLY B 39 LYS B 45 -1 N LEU B 43 O ALA B 52 SHEET 4 AA2 7 GLU B 231 ILE B 241 -1 O PHE B 234 N CYS B 44 SHEET 5 AA2 7 GLY B 218 LYS B 228 -1 N GLY B 224 O PHE B 235 SHEET 6 AA2 7 TYR B 200 PHE B 208 -1 N GLY B 207 O TRP B 221 SHEET 7 AA2 7 VAL B 193 ALA B 196 -1 N GLU B 195 O VAL B 202 SSBOND 1 CYS A 44 CYS A 51 1555 1555 2.07 SSBOND 2 CYS B 44 CYS B 51 1555 1555 2.08 LINK C PHE A 69 N KCX A 70 1555 1555 1.34 LINK C KCX A 70 N ILE A 71 1555 1555 1.34 CRYST1 48.813 96.346 125.137 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020486 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010379 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007991 0.00000