HEADER VIRAL PROTEIN/RNA 23-DEC-20 7L6T TITLE CRYSTAL STRUCTURE OF SARS-COV-2 NSP16/10 HETERODIMER IN COMPLEX WITH TITLE 2 (M7GPPPA2M)PUPUPAPAPA (CAP-1), S-ADENOSYL-L-HOMOCYSTEINE (SAH) AND TITLE 3 TWO MAGNESIUM (MG) IONS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2'-O-METHYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NSP16; COMPND 5 EC: 2.1.1.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NON-STRUCTURAL PROTEIN 10; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: NSP10; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: RNA (5'-D(*(M7G))-R(P*(A2M)P*UP*UP*A)-3'); COMPND 14 CHAIN: C; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV,SARS-COV-2; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: REP, 1A-1B; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VARIANT: MAGIC; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PMCSG53; SOURCE 13 MOL_ID: 2; SOURCE 14 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 15 2; SOURCE 16 ORGANISM_COMMON: 2019-NCOV,SARS-COV-2; SOURCE 17 ORGANISM_TAXID: 2697049; SOURCE 18 GENE: REP, 1A-1B; SOURCE 19 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 20 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 21 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 22 EXPRESSION_SYSTEM_VARIANT: MAGIC; SOURCE 23 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 24 EXPRESSION_SYSTEM_PLASMID: PMCSG53; SOURCE 25 MOL_ID: 3; SOURCE 26 SYNTHETIC: YES; SOURCE 27 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 28 ORGANISM_TAXID: 32630 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, NSP16, NSP10, COMPLEX, VIRAL PROTEIN, SAH, CAP-1, KEYWDS 3 VIRAL PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,M.ROSAS-LEMUS,O.KIRYUKHINA,J.S.BRUNZELLE, AUTHOR 2 K.J.F.SATCHELL,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 4 06-MAR-24 7L6T 1 COMPND FORMUL REVDAT 3 18-OCT-23 7L6T 1 REMARK REVDAT 2 15-DEC-21 7L6T 1 JRNL REVDAT 1 06-JAN-21 7L6T 0 JRNL AUTH G.MINASOV,M.ROSAS-LEMUS,L.SHUVALOVA,N.L.INNISS, JRNL AUTH 2 J.S.BRUNZELLE,C.M.DACZKOWSKI,P.HOOVER,A.D.MESECAR, JRNL AUTH 3 K.J.F.SATCHELL JRNL TITL MN 2+ COORDINATES CAP-0-RNA TO ALIGN SUBSTRATES FOR JRNL TITL 2 EFFICIENT 2'- O -METHYL TRANSFER BY SARS-COV-2 NSP16. JRNL REF SCI.SIGNAL. V. 14 2021 JRNL REFN ESSN 1937-9145 JRNL PMID 34131072 JRNL DOI 10.1126/SCISIGNAL.ABH2071 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 76229 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.142 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.162 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3950 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5247 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.2390 REMARK 3 BIN FREE R VALUE SET COUNT : 262 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3191 REMARK 3 NUCLEIC ACID ATOMS : 96 REMARK 3 HETEROGEN ATOMS : 70 REMARK 3 SOLVENT ATOMS : 508 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.75000 REMARK 3 B22 (A**2) : 0.75000 REMARK 3 B33 (A**2) : -2.43000 REMARK 3 B12 (A**2) : 0.38000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.067 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.068 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.046 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.926 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.975 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3630 ; 0.006 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3272 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4974 ; 1.330 ; 1.660 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7575 ; 0.379 ; 1.607 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 449 ; 3.421 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 160 ;29.239 ;23.812 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 578 ; 8.898 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ; 7.690 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 488 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4138 ; 0.054 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 825 ; 0.048 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6798 A 6822 REMARK 3 ORIGIN FOR THE GROUP (A): 94.874 38.586 32.010 REMARK 3 T TENSOR REMARK 3 T11: 0.0956 T22: 0.0199 REMARK 3 T33: 0.1692 T12: -0.0034 REMARK 3 T13: -0.0095 T23: -0.0420 REMARK 3 L TENSOR REMARK 3 L11: 4.0583 L22: 1.0496 REMARK 3 L33: 2.8515 L12: -0.1310 REMARK 3 L13: 1.4256 L23: 0.1355 REMARK 3 S TENSOR REMARK 3 S11: 0.0090 S12: -0.1226 S13: 0.4511 REMARK 3 S21: 0.1083 S22: 0.0116 S23: -0.1265 REMARK 3 S31: -0.0542 S32: 0.1363 S33: -0.0206 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6823 A 7011 REMARK 3 ORIGIN FOR THE GROUP (A): 90.199 21.761 23.303 REMARK 3 T TENSOR REMARK 3 T11: 0.1552 T22: 0.0029 REMARK 3 T33: 0.0938 T12: 0.0133 REMARK 3 T13: -0.0203 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.9911 L22: 1.2883 REMARK 3 L33: 1.1718 L12: -0.3962 REMARK 3 L13: 0.0398 L23: 0.1652 REMARK 3 S TENSOR REMARK 3 S11: 0.0393 S12: 0.0057 S13: -0.0258 REMARK 3 S21: -0.0387 S22: 0.0365 S23: -0.0070 REMARK 3 S31: 0.2165 S32: 0.0272 S33: -0.0758 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7012 A 7050 REMARK 3 ORIGIN FOR THE GROUP (A): 92.753 33.805 26.968 REMARK 3 T TENSOR REMARK 3 T11: 0.0887 T22: 0.0123 REMARK 3 T33: 0.1394 T12: -0.0001 REMARK 3 T13: 0.0004 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 1.4617 L22: 1.0968 REMARK 3 L33: 1.5282 L12: -0.1854 REMARK 3 L13: 0.4861 L23: 0.3073 REMARK 3 S TENSOR REMARK 3 S11: 0.0302 S12: -0.0290 S13: 0.1931 REMARK 3 S21: 0.0177 S22: 0.0479 S23: -0.1010 REMARK 3 S31: 0.0141 S32: 0.1039 S33: -0.0781 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7051 A 7062 REMARK 3 ORIGIN FOR THE GROUP (A): 102.657 22.868 5.094 REMARK 3 T TENSOR REMARK 3 T11: 0.1929 T22: 0.1205 REMARK 3 T33: 0.0668 T12: 0.0320 REMARK 3 T13: 0.0818 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 13.9082 L22: 14.2951 REMARK 3 L33: 8.3250 L12: -8.5000 REMARK 3 L13: -2.2715 L23: 1.1542 REMARK 3 S TENSOR REMARK 3 S11: 0.3155 S12: 0.9078 S13: 0.5197 REMARK 3 S21: -0.5802 S22: -0.2046 S23: -0.7919 REMARK 3 S31: 0.3392 S32: 0.3928 S33: -0.1109 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7063 A 7085 REMARK 3 ORIGIN FOR THE GROUP (A): 107.346 22.791 7.820 REMARK 3 T TENSOR REMARK 3 T11: 0.1555 T22: 0.1277 REMARK 3 T33: 0.1415 T12: 0.0714 REMARK 3 T13: 0.0986 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 6.3861 L22: 9.7134 REMARK 3 L33: 6.6302 L12: 2.9354 REMARK 3 L13: -0.6478 L23: 2.1654 REMARK 3 S TENSOR REMARK 3 S11: 0.1379 S12: 0.0817 S13: -0.1664 REMARK 3 S21: -0.4015 S22: 0.0818 S23: -1.0462 REMARK 3 S31: 0.0540 S32: 0.6181 S33: -0.2197 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7086 A 7096 REMARK 3 ORIGIN FOR THE GROUP (A): 91.012 -0.961 21.214 REMARK 3 T TENSOR REMARK 3 T11: 0.2598 T22: 0.0178 REMARK 3 T33: 0.1006 T12: 0.0021 REMARK 3 T13: 0.0135 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 0.2678 L22: 12.9375 REMARK 3 L33: 18.4668 L12: 1.7604 REMARK 3 L13: -1.5505 L23: -13.6247 REMARK 3 S TENSOR REMARK 3 S11: -0.0029 S12: 0.0285 S13: 0.0561 REMARK 3 S21: 0.2171 S22: 0.3177 S23: 0.3454 REMARK 3 S31: -0.1214 S32: -0.5385 S33: -0.3147 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4272 B 4277 REMARK 3 ORIGIN FOR THE GROUP (A): 61.193 -2.135 13.283 REMARK 3 T TENSOR REMARK 3 T11: 0.1415 T22: 0.1935 REMARK 3 T33: 0.6459 T12: -0.0400 REMARK 3 T13: 0.0413 T23: 0.2036 REMARK 3 L TENSOR REMARK 3 L11: 4.5387 L22: 63.7436 REMARK 3 L33: 1.2024 L12: 4.1156 REMARK 3 L13: -1.8869 L23: -6.3554 REMARK 3 S TENSOR REMARK 3 S11: 0.4105 S12: -0.7546 S13: -0.4237 REMARK 3 S21: -1.5379 S22: -0.8161 S23: -0.9413 REMARK 3 S31: 0.0008 S32: 0.3702 S33: 0.4057 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4278 B 4287 REMARK 3 ORIGIN FOR THE GROUP (A): 55.024 8.933 16.568 REMARK 3 T TENSOR REMARK 3 T11: 0.1120 T22: 0.2836 REMARK 3 T33: 0.5027 T12: -0.1364 REMARK 3 T13: -0.1282 T23: 0.0398 REMARK 3 L TENSOR REMARK 3 L11: 13.9745 L22: 18.8229 REMARK 3 L33: 8.0361 L12: -2.5522 REMARK 3 L13: -3.6577 L23: 8.8205 REMARK 3 S TENSOR REMARK 3 S11: 0.0109 S12: -0.3563 S13: -0.7609 REMARK 3 S21: -0.1063 S22: -0.2756 S23: 1.3447 REMARK 3 S31: 0.4779 S32: -0.9727 S33: 0.2647 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4288 B 4307 REMARK 3 ORIGIN FOR THE GROUP (A): 68.669 24.162 13.442 REMARK 3 T TENSOR REMARK 3 T11: 0.1289 T22: 0.0972 REMARK 3 T33: 0.1982 T12: -0.0134 REMARK 3 T13: -0.0878 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 2.8173 L22: 3.0050 REMARK 3 L33: 1.8941 L12: -0.0547 REMARK 3 L13: 0.5497 L23: -0.6197 REMARK 3 S TENSOR REMARK 3 S11: 0.1062 S12: 0.1796 S13: -0.0526 REMARK 3 S21: -0.1927 S22: -0.0642 S23: 0.3811 REMARK 3 S31: 0.0558 S32: -0.2467 S33: -0.0420 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4308 B 4326 REMARK 3 ORIGIN FOR THE GROUP (A): 70.418 24.330 7.761 REMARK 3 T TENSOR REMARK 3 T11: 0.1557 T22: 0.1047 REMARK 3 T33: 0.1302 T12: -0.0058 REMARK 3 T13: -0.1389 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 4.2651 L22: 4.0846 REMARK 3 L33: 3.5535 L12: -1.0499 REMARK 3 L13: 0.2683 L23: -0.6480 REMARK 3 S TENSOR REMARK 3 S11: 0.0761 S12: 0.4587 S13: -0.0233 REMARK 3 S21: -0.4356 S22: -0.0471 S23: 0.3767 REMARK 3 S31: 0.1400 S32: -0.3237 S33: -0.0289 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4327 B 4348 REMARK 3 ORIGIN FOR THE GROUP (A): 71.238 7.224 9.782 REMARK 3 T TENSOR REMARK 3 T11: 0.4088 T22: 0.0891 REMARK 3 T33: 0.3263 T12: -0.0593 REMARK 3 T13: -0.1434 T23: -0.1125 REMARK 3 L TENSOR REMARK 3 L11: 5.5872 L22: 8.9415 REMARK 3 L33: 2.6550 L12: 0.2802 REMARK 3 L13: -0.6754 L23: -3.4133 REMARK 3 S TENSOR REMARK 3 S11: -0.0698 S12: 0.4963 S13: -0.8464 REMARK 3 S21: -1.0502 S22: 0.0037 S23: 0.4097 REMARK 3 S31: 0.7495 S32: -0.1532 S33: 0.0661 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4349 B 4372 REMARK 3 ORIGIN FOR THE GROUP (A): 63.170 19.170 7.866 REMARK 3 T TENSOR REMARK 3 T11: 0.2134 T22: 0.2053 REMARK 3 T33: 0.2950 T12: -0.0647 REMARK 3 T13: -0.2074 T23: -0.0548 REMARK 3 L TENSOR REMARK 3 L11: 3.2081 L22: 3.4820 REMARK 3 L33: 3.6950 L12: -0.2338 REMARK 3 L13: -1.2483 L23: -1.2399 REMARK 3 S TENSOR REMARK 3 S11: 0.0583 S12: 0.3713 S13: -0.4151 REMARK 3 S21: -0.5243 S22: 0.0293 S23: 0.7218 REMARK 3 S31: 0.3077 S32: -0.6211 S33: -0.0876 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4373 B 4385 REMARK 3 ORIGIN FOR THE GROUP (A): 60.352 22.360 -3.033 REMARK 3 T TENSOR REMARK 3 T11: 0.3880 T22: 0.4844 REMARK 3 T33: 0.2924 T12: -0.0438 REMARK 3 T13: -0.3186 T23: -0.0476 REMARK 3 L TENSOR REMARK 3 L11: 17.2619 L22: 8.3277 REMARK 3 L33: 18.5725 L12: -4.6665 REMARK 3 L13: -2.9102 L23: -5.1823 REMARK 3 S TENSOR REMARK 3 S11: 0.2485 S12: 1.1877 S13: -0.3243 REMARK 3 S21: -0.6939 S22: -0.0842 S23: 0.8797 REMARK 3 S31: 0.1912 S32: -1.3340 S33: -0.1643 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 0 C 0 REMARK 3 ORIGIN FOR THE GROUP (A): 85.447 27.163 41.086 REMARK 3 T TENSOR REMARK 3 T11: 0.2072 T22: 0.0819 REMARK 3 T33: 0.0867 T12: 0.0130 REMARK 3 T13: -0.0052 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 0.4487 L22: 9.0786 REMARK 3 L33: 2.7049 L12: 0.3200 REMARK 3 L13: -0.4436 L23: -0.9056 REMARK 3 S TENSOR REMARK 3 S11: -0.0071 S12: -0.1164 S13: 0.0751 REMARK 3 S21: 0.4268 S22: -0.0021 S23: -0.0173 REMARK 3 S31: 0.1430 S32: -0.1293 S33: 0.0093 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 1 REMARK 3 ORIGIN FOR THE GROUP (A): 82.735 21.396 33.143 REMARK 3 T TENSOR REMARK 3 T11: 0.2408 T22: 0.1062 REMARK 3 T33: 0.2018 T12: -0.0478 REMARK 3 T13: 0.0119 T23: -0.0180 REMARK 3 L TENSOR REMARK 3 L11: 10.0795 L22: 8.5380 REMARK 3 L33: 1.9355 L12: -8.3932 REMARK 3 L13: -1.2199 L23: -0.6444 REMARK 3 S TENSOR REMARK 3 S11: -0.1464 S12: 0.1327 S13: -0.5246 REMARK 3 S21: -0.1220 S22: 0.0708 S23: 0.4524 REMARK 3 S31: 0.3154 S32: -0.2178 S33: 0.0756 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 2 REMARK 3 ORIGIN FOR THE GROUP (A): 78.660 20.724 30.513 REMARK 3 T TENSOR REMARK 3 T11: 0.1683 T22: 0.0801 REMARK 3 T33: 0.1487 T12: -0.0355 REMARK 3 T13: -0.0184 T23: 0.0477 REMARK 3 L TENSOR REMARK 3 L11: 6.7744 L22: 18.5701 REMARK 3 L33: 0.0507 L12: 4.4843 REMARK 3 L13: 0.1554 L23: 0.6977 REMARK 3 S TENSOR REMARK 3 S11: 0.0178 S12: -0.1635 S13: -0.5513 REMARK 3 S21: 0.6233 S22: 0.0101 S23: -0.3751 REMARK 3 S31: 0.0380 S32: -0.0415 S33: -0.0279 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 3 C 4 REMARK 3 ORIGIN FOR THE GROUP (A): 74.311 26.520 30.864 REMARK 3 T TENSOR REMARK 3 T11: 0.1301 T22: 0.1028 REMARK 3 T33: 0.1313 T12: -0.0340 REMARK 3 T13: 0.0105 T23: 0.0425 REMARK 3 L TENSOR REMARK 3 L11: 8.8954 L22: 18.2851 REMARK 3 L33: 2.2659 L12: -7.9645 REMARK 3 L13: 2.8480 L23: 1.3344 REMARK 3 S TENSOR REMARK 3 S11: 0.0174 S12: -0.1926 S13: 0.0001 REMARK 3 S21: 0.3788 S22: -0.0725 S23: 0.1756 REMARK 3 S31: 0.1468 S32: -0.1586 S33: 0.0551 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7104 A 7104 REMARK 3 ORIGIN FOR THE GROUP (A): 84.684 15.362 27.640 REMARK 3 T TENSOR REMARK 3 T11: 0.2041 T22: 0.0379 REMARK 3 T33: 0.1372 T12: -0.0095 REMARK 3 T13: -0.0096 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 6.5789 L22: 7.6065 REMARK 3 L33: 3.5013 L12: 0.0541 REMARK 3 L13: 1.1412 L23: -0.1945 REMARK 3 S TENSOR REMARK 3 S11: -0.0653 S12: -0.2567 S13: -0.1035 REMARK 3 S21: 0.1474 S22: 0.2828 S23: 0.3071 REMARK 3 S31: 0.2784 S32: -0.2580 S33: -0.2175 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7L6T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1000253799. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12708 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : BE REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81048 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 20.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 1.15600 REMARK 200 R SYM FOR SHELL (I) : 1.15600 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6W4H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 3.8 MG/ML (NSP10/NSP16 1:1), REMARK 280 0.15M SODIUM CHLORIDE, 0.01M TRIS PH 7.5 , 2MM SAM, 1MM TCEP, 5% REMARK 280 GLYCEROL;SCREEN: CLASSICS II (B3), 0.5M MAGNESIUM FORMATE, 0.1M REMARK 280 HEPES PH 7.5;SOAK: 6HOURS, 0.2MM M7GPPPAUUAAA, 5MM SAM, IN REMARK 280 SCREEN SOLUTION;CRYO: 25% SUCROSE IN SCREEN SOLUTION., VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 17.54300 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.08600 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 35.08600 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 17.54300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 6797 REMARK 465 SER B 4252 REMARK 465 ASN B 4253 REMARK 465 ALA B 4254 REMARK 465 GLY B 4255 REMARK 465 ASN B 4256 REMARK 465 ALA B 4257 REMARK 465 THR B 4258 REMARK 465 GLU B 4259 REMARK 465 VAL B 4260 REMARK 465 PRO B 4261 REMARK 465 ALA B 4262 REMARK 465 ASN B 4263 REMARK 465 SER B 4264 REMARK 465 THR B 4265 REMARK 465 VAL B 4266 REMARK 465 LEU B 4267 REMARK 465 SER B 4268 REMARK 465 PHE B 4269 REMARK 465 CYS B 4270 REMARK 465 ALA B 4271 REMARK 465 LEU B 4386 REMARK 465 ARG B 4387 REMARK 465 GLU B 4388 REMARK 465 PRO B 4389 REMARK 465 MET B 4390 REMARK 465 LEU B 4391 REMARK 465 GLN B 4392 REMARK 465 A C 5 REMARK 465 A C 6 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 A C 4 C5' C4' O4' C3' O3' C2' O2' REMARK 470 A C 4 C1' N9 C8 N7 C5 C6 N6 REMARK 470 A C 4 N1 C2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A6945 -114.80 -102.56 REMARK 500 GLU A6945 -114.16 -101.49 REMARK 500 ASN A7008 89.40 71.68 REMARK 500 VAL B4372 -61.86 -96.51 REMARK 500 TYR B4379 47.14 -141.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A7590 DISTANCE = 6.27 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A7101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A6996 OD1 REMARK 620 2 HOH A7388 O 91.9 REMARK 620 3 HOH A7455 O 92.4 90.9 REMARK 620 4 HOH C 205 O 85.2 177.1 89.6 REMARK 620 5 HOH C 206 O 95.1 92.3 171.7 87.6 REMARK 620 6 HOH C 219 O 176.0 91.2 85.1 91.6 87.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A7254 O REMARK 620 2 HOH A7370 O 88.4 REMARK 620 3 U C 3 OP1 89.3 91.5 REMARK 620 4 A C 4 OP2 92.6 179.1 88.7 REMARK 620 5 HOH C 212 O 174.1 90.0 96.5 89.0 REMARK 620 6 HOH C 215 O 86.7 88.1 176.0 91.8 87.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B4401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B4327 SG REMARK 620 2 CYS B4330 SG 114.0 REMARK 620 3 HIS B4336 NE2 104.4 112.7 REMARK 620 4 CYS B4343 SG 107.0 114.6 103.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B4402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B4370 SG REMARK 620 2 CYS B4373 SG 102.8 REMARK 620 3 CYS B4381 SG 98.0 108.7 REMARK 620 4 CYS B4383 SG 109.8 124.5 109.7 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP52010 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: CSGID-IDP52016 RELATED DB: TARGETTRACK DBREF 7L6T A 6799 7096 UNP P0DTD1 R1AB_SARS2 6799 7096 DBREF 7L6T B 4254 4392 UNP P0DTD1 R1AB_SARS2 4254 4392 DBREF 7L6T C 0 6 PDB 7L6T 7L6T 0 6 SEQADV 7L6T SER A 6797 UNP P0DTD1 EXPRESSION TAG SEQADV 7L6T ASN A 6798 UNP P0DTD1 EXPRESSION TAG SEQADV 7L6T SER B 4252 UNP P0DTD1 EXPRESSION TAG SEQADV 7L6T ASN B 4253 UNP P0DTD1 EXPRESSION TAG SEQRES 1 A 300 SER ASN SER SER GLN ALA TRP GLN PRO GLY VAL ALA MET SEQRES 2 A 300 PRO ASN LEU TYR LYS MET GLN ARG MET LEU LEU GLU LYS SEQRES 3 A 300 CYS ASP LEU GLN ASN TYR GLY ASP SER ALA THR LEU PRO SEQRES 4 A 300 LYS GLY ILE MET MET ASN VAL ALA LYS TYR THR GLN LEU SEQRES 5 A 300 CYS GLN TYR LEU ASN THR LEU THR LEU ALA VAL PRO TYR SEQRES 6 A 300 ASN MET ARG VAL ILE HIS PHE GLY ALA GLY SER ASP LYS SEQRES 7 A 300 GLY VAL ALA PRO GLY THR ALA VAL LEU ARG GLN TRP LEU SEQRES 8 A 300 PRO THR GLY THR LEU LEU VAL ASP SER ASP LEU ASN ASP SEQRES 9 A 300 PHE VAL SER ASP ALA ASP SER THR LEU ILE GLY ASP CYS SEQRES 10 A 300 ALA THR VAL HIS THR ALA ASN LYS TRP ASP LEU ILE ILE SEQRES 11 A 300 SER ASP MET TYR ASP PRO LYS THR LYS ASN VAL THR LYS SEQRES 12 A 300 GLU ASN ASP SER LYS GLU GLY PHE PHE THR TYR ILE CYS SEQRES 13 A 300 GLY PHE ILE GLN GLN LYS LEU ALA LEU GLY GLY SER VAL SEQRES 14 A 300 ALA ILE LYS ILE THR GLU HIS SER TRP ASN ALA ASP LEU SEQRES 15 A 300 TYR LYS LEU MET GLY HIS PHE ALA TRP TRP THR ALA PHE SEQRES 16 A 300 VAL THR ASN VAL ASN ALA SER SER SER GLU ALA PHE LEU SEQRES 17 A 300 ILE GLY CYS ASN TYR LEU GLY LYS PRO ARG GLU GLN ILE SEQRES 18 A 300 ASP GLY TYR VAL MET HIS ALA ASN TYR ILE PHE TRP ARG SEQRES 19 A 300 ASN THR ASN PRO ILE GLN LEU SER SER TYR SER LEU PHE SEQRES 20 A 300 ASP MET SER LYS PHE PRO LEU LYS LEU ARG GLY THR ALA SEQRES 21 A 300 VAL MET SER LEU LYS GLU GLY GLN ILE ASN ASP MET ILE SEQRES 22 A 300 LEU SER LEU LEU SER LYS GLY ARG LEU ILE ILE ARG GLU SEQRES 23 A 300 ASN ASN ARG VAL VAL ILE SER SER ASP VAL LEU VAL ASN SEQRES 24 A 300 ASN SEQRES 1 B 141 SER ASN ALA GLY ASN ALA THR GLU VAL PRO ALA ASN SER SEQRES 2 B 141 THR VAL LEU SER PHE CYS ALA PHE ALA VAL ASP ALA ALA SEQRES 3 B 141 LYS ALA TYR LYS ASP TYR LEU ALA SER GLY GLY GLN PRO SEQRES 4 B 141 ILE THR ASN CYS VAL LYS MET LEU CYS THR HIS THR GLY SEQRES 5 B 141 THR GLY GLN ALA ILE THR VAL THR PRO GLU ALA ASN MET SEQRES 6 B 141 ASP GLN GLU SER PHE GLY GLY ALA SER CYS CYS LEU TYR SEQRES 7 B 141 CYS ARG CYS HIS ILE ASP HIS PRO ASN PRO LYS GLY PHE SEQRES 8 B 141 CYS ASP LEU LYS GLY LYS TYR VAL GLN ILE PRO THR THR SEQRES 9 B 141 CYS ALA ASN ASP PRO VAL GLY PHE THR LEU LYS ASN THR SEQRES 10 B 141 VAL CYS THR VAL CYS GLY MET TRP LYS GLY TYR GLY CYS SEQRES 11 B 141 SER CYS ASP GLN LEU ARG GLU PRO MET LEU GLN SEQRES 1 C 7 M7G A2M U U A A A HET M7G C 0 29 HET A2M C 1 23 HET MG A7101 1 HET CL A7102 1 HET FMT A7103 3 HET SAH A7104 26 HET GLC A7105 12 HET GLC A7106 12 HET ZN B4401 1 HET ZN B4402 1 HET BDF B4403 12 HET MG C 101 1 HETNAM M7G 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE HETNAM A2M 2'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPHATE) HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM FMT FORMIC ACID HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM ZN ZINC ION HETNAM BDF BETA-D-FRUCTOPYRANOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN BDF BETA-D-FRUCTOSE; D-FRUCTOSE; FRUCTOSE FORMUL 3 M7G C11 H18 N5 O11 P2 1+ FORMUL 3 A2M C11 H16 N5 O7 P FORMUL 4 MG 2(MG 2+) FORMUL 5 CL CL 1- FORMUL 6 FMT C H2 O2 FORMUL 7 SAH C14 H20 N6 O5 S FORMUL 8 GLC 2(C6 H12 O6) FORMUL 10 ZN 2(ZN 2+) FORMUL 12 BDF C6 H12 O6 FORMUL 14 HOH *508(H2 O) HELIX 1 AA1 SER A 6799 GLN A 6804 5 6 HELIX 2 AA2 PRO A 6810 MET A 6815 1 6 HELIX 3 AA3 MET A 6839 ASN A 6853 1 15 HELIX 4 AA4 ALA A 6877 LEU A 6887 1 11 HELIX 5 AA5 ASP A 6912 ALA A 6914 5 3 HELIX 6 AA6 ASP A 6931 ASN A 6936 5 6 HELIX 7 AA7 GLY A 6946 LYS A 6958 1 13 HELIX 8 AA8 ASN A 6975 GLY A 6983 1 9 HELIX 9 AA9 VAL A 6995 ALA A 6997 5 3 HELIX 10 AB1 ASP A 7018 ASN A 7033 1 16 HELIX 11 AB2 SER A 7039 ASP A 7044 5 6 HELIX 12 AB3 ASN A 7066 LYS A 7075 1 10 HELIX 13 AB4 ASP B 4275 SER B 4286 1 12 HELIX 14 AB5 ALA B 4324 CYS B 4326 5 3 HELIX 15 AB6 CYS B 4327 HIS B 4333 1 7 HELIX 16 AB7 THR B 4355 ALA B 4357 5 3 HELIX 17 AB8 ASP B 4359 ASN B 4367 1 9 SHEET 1 AA1 8 GLY A6806 ALA A6808 0 SHEET 2 AA1 8 PHE A6985 THR A6993 -1 O VAL A6992 N VAL A6807 SHEET 3 AA1 8 ALA A7002 TYR A7009 -1 O CYS A7007 N TRP A6987 SHEET 4 AA1 8 LEU A6959 ILE A6969 -1 N ILE A6967 O LEU A7004 SHEET 5 AA1 8 TRP A6922 SER A6927 1 N TRP A6922 O ALA A6960 SHEET 6 AA1 8 ARG A6864 PHE A6868 1 N PHE A6868 O ILE A6926 SHEET 7 AA1 8 LEU A6892 ASP A6897 1 O LEU A6892 N VAL A6865 SHEET 8 AA1 8 SER A6907 ILE A6910 1 O LEU A6909 N ASP A6895 SHEET 1 AA2 2 VAL A6916 THR A6918 0 SHEET 2 AA2 2 ILE A7088 SER A7090 -1 O SER A7089 N HIS A6917 SHEET 1 AA3 2 ALA A7056 MET A7058 0 SHEET 2 AA3 2 LEU A7078 ILE A7080 1 O ILE A7079 N MET A7058 SHEET 1 AA4 3 ILE B4308 THR B4309 0 SHEET 2 AA4 3 TYR B4349 PRO B4353 -1 O TYR B4349 N THR B4309 SHEET 3 AA4 3 GLN B4318 GLY B4322 -1 N GLU B4319 O ILE B4352 LINK O3B M7G C 0 P A2M C 1 1555 1555 1.59 LINK O3' A2M C 1 P U C 2 1555 1555 1.61 LINK OD1 ASN A6996 MG MG A7101 1555 1555 2.09 LINK MG MG A7101 O HOH A7388 1555 1555 2.07 LINK MG MG A7101 O HOH A7455 1555 1555 2.09 LINK MG MG A7101 O HOH C 205 1555 1555 2.09 LINK MG MG A7101 O HOH C 206 1555 1555 2.16 LINK MG MG A7101 O HOH C 219 1555 1555 2.13 LINK O HOH A7254 MG MG C 101 1555 1555 2.14 LINK O HOH A7370 MG MG C 101 1555 1555 2.19 LINK SG CYS B4327 ZN ZN B4401 1555 1555 2.26 LINK SG CYS B4330 ZN ZN B4401 1555 1555 2.33 LINK NE2 HIS B4336 ZN ZN B4401 1555 1555 2.11 LINK SG CYS B4343 ZN ZN B4401 1555 1555 2.29 LINK SG CYS B4370 ZN ZN B4402 1555 1555 2.33 LINK SG CYS B4373 ZN ZN B4402 1555 1555 2.34 LINK SG CYS B4381 ZN ZN B4402 1555 1555 2.32 LINK SG CYS B4383 ZN ZN B4402 1555 1555 2.34 LINK OP1 U C 3 MG MG C 101 1555 1555 1.93 LINK OP2 A C 4 MG MG C 101 1555 1555 2.08 LINK MG MG C 101 O HOH C 212 1555 1555 2.08 LINK MG MG C 101 O HOH C 215 1555 1555 2.21 CRYST1 169.351 169.351 52.629 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005905 0.003409 0.000000 0.00000 SCALE2 0.000000 0.006818 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019001 0.00000