HEADER ISOMERASE 24-DEC-20 7L6Y TITLE CRYSTAL STRUCTURE OF THE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE (PPIB) TITLE 2 FROM STREPTOCOCCUS PYOGENES. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PPIASE; COMPND 5 EC: 5.2.1.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PYOGENES MGAS5005; SOURCE 3 ORGANISM_TAXID: 293653; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: MAGIC; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, PEPTIDYLPROLYL ISOMERASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,O.KIRYUKHINA,K.J.F.SATCHELL,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 1 01-DEC-21 7L6Y 0 JRNL AUTH G.MINASOV,L.SHUVALOVA,O.KIRYUKHINA,K.J.F.SATCHELL, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF THE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE JRNL TITL 2 (PPIB) FROM STREPTOCOCCUS PYOGENES. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 87382 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4603 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.28 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6212 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.09 REMARK 3 BIN R VALUE (WORKING SET) : 0.2310 REMARK 3 BIN FREE R VALUE SET COUNT : 333 REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3236 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 504 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.44000 REMARK 3 B22 (A**2) : -0.49000 REMARK 3 B33 (A**2) : 0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.057 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.055 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.034 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.784 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.965 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3515 ; 0.006 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3184 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4776 ; 1.409 ; 1.654 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7488 ; 0.473 ; 1.588 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 462 ; 4.685 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 172 ;31.748 ;25.233 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 590 ;10.174 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;11.734 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 455 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4084 ; 0.050 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 684 ; 0.048 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 6699 ; 8.836 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 60 A 81 REMARK 3 ORIGIN FOR THE GROUP (A): -6.6428 9.1969 10.4466 REMARK 3 T TENSOR REMARK 3 T11: 0.0351 T22: 0.0577 REMARK 3 T33: 0.0840 T12: -0.0385 REMARK 3 T13: 0.0306 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 1.9291 L22: 1.8355 REMARK 3 L33: 2.5868 L12: -0.9513 REMARK 3 L13: 0.7710 L23: -0.5932 REMARK 3 S TENSOR REMARK 3 S11: -0.0125 S12: 0.1099 S13: 0.1827 REMARK 3 S21: -0.0639 S22: 0.0043 S23: -0.1908 REMARK 3 S31: -0.2346 S32: 0.3554 S33: 0.0082 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 82 A 143 REMARK 3 ORIGIN FOR THE GROUP (A): -16.6601 -2.0575 17.4418 REMARK 3 T TENSOR REMARK 3 T11: 0.0037 T22: 0.0350 REMARK 3 T33: 0.0066 T12: 0.0036 REMARK 3 T13: 0.0039 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 1.5061 L22: 1.2963 REMARK 3 L33: 0.9897 L12: -0.3477 REMARK 3 L13: -0.4502 L23: 0.3137 REMARK 3 S TENSOR REMARK 3 S11: -0.0323 S12: -0.1222 S13: -0.0143 REMARK 3 S21: 0.0074 S22: 0.0223 S23: 0.0224 REMARK 3 S31: 0.0378 S32: -0.0237 S33: 0.0100 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 144 A 193 REMARK 3 ORIGIN FOR THE GROUP (A): -20.5015 1.0605 9.5682 REMARK 3 T TENSOR REMARK 3 T11: 0.0146 T22: 0.0664 REMARK 3 T33: 0.0182 T12: 0.0093 REMARK 3 T13: 0.0090 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 1.3611 L22: 0.6750 REMARK 3 L33: 1.6260 L12: -0.3516 REMARK 3 L13: -0.8745 L23: 0.5800 REMARK 3 S TENSOR REMARK 3 S11: 0.0222 S12: 0.0918 S13: 0.0165 REMARK 3 S21: -0.0693 S22: -0.0368 S23: 0.0168 REMARK 3 S31: -0.0492 S32: -0.1471 S33: 0.0146 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 194 A 258 REMARK 3 ORIGIN FOR THE GROUP (A): -10.0346 -5.3041 5.2314 REMARK 3 T TENSOR REMARK 3 T11: 0.0222 T22: 0.0622 REMARK 3 T33: 0.0428 T12: 0.0039 REMARK 3 T13: 0.0236 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.7727 L22: 0.7283 REMARK 3 L33: 1.1901 L12: -0.3001 REMARK 3 L13: 0.3270 L23: -0.2175 REMARK 3 S TENSOR REMARK 3 S11: 0.0347 S12: 0.0603 S13: -0.0534 REMARK 3 S21: -0.0777 S22: -0.0042 S23: -0.0647 REMARK 3 S31: 0.0689 S32: 0.0421 S33: -0.0305 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 259 A 268 REMARK 3 ORIGIN FOR THE GROUP (A): -13.8768 12.6581 21.8020 REMARK 3 T TENSOR REMARK 3 T11: 0.1044 T22: 0.0701 REMARK 3 T33: 0.0938 T12: -0.0101 REMARK 3 T13: -0.0089 T23: -0.0294 REMARK 3 L TENSOR REMARK 3 L11: 3.7883 L22: 2.4839 REMARK 3 L33: 1.3942 L12: -1.8501 REMARK 3 L13: -1.7179 L23: 0.8620 REMARK 3 S TENSOR REMARK 3 S11: 0.0461 S12: 0.1067 S13: 0.2686 REMARK 3 S21: 0.1495 S22: -0.0393 S23: -0.0665 REMARK 3 S31: -0.1964 S32: -0.0152 S33: -0.0068 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 60 B 81 REMARK 3 ORIGIN FOR THE GROUP (A): -29.4902 33.2889 42.8593 REMARK 3 T TENSOR REMARK 3 T11: 0.0883 T22: 0.0478 REMARK 3 T33: 0.0990 T12: 0.0292 REMARK 3 T13: 0.0246 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 1.4295 L22: 1.6525 REMARK 3 L33: 1.8612 L12: 0.8720 REMARK 3 L13: 0.8419 L23: 0.4635 REMARK 3 S TENSOR REMARK 3 S11: 0.0379 S12: -0.0762 S13: 0.1418 REMARK 3 S21: 0.0032 S22: -0.0595 S23: 0.1477 REMARK 3 S31: -0.3107 S32: -0.1969 S33: 0.0216 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 82 B 139 REMARK 3 ORIGIN FOR THE GROUP (A): -20.5281 21.2196 36.4265 REMARK 3 T TENSOR REMARK 3 T11: 0.0064 T22: 0.0354 REMARK 3 T33: 0.0113 T12: -0.0086 REMARK 3 T13: 0.0056 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.0175 L22: 1.2733 REMARK 3 L33: 1.1877 L12: 0.0049 REMARK 3 L13: -0.4847 L23: 0.0059 REMARK 3 S TENSOR REMARK 3 S11: -0.0016 S12: 0.0801 S13: -0.0230 REMARK 3 S21: -0.0375 S22: 0.0012 S23: -0.0253 REMARK 3 S31: -0.0580 S32: 0.1124 S33: 0.0004 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 140 B 193 REMARK 3 ORIGIN FOR THE GROUP (A): -15.1098 25.1024 42.6133 REMARK 3 T TENSOR REMARK 3 T11: 0.0130 T22: 0.0661 REMARK 3 T33: 0.0237 T12: -0.0203 REMARK 3 T13: 0.0098 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 1.1238 L22: 0.7481 REMARK 3 L33: 1.5637 L12: 0.3899 REMARK 3 L13: -0.8964 L23: -0.1782 REMARK 3 S TENSOR REMARK 3 S11: 0.0418 S12: -0.0678 S13: -0.0108 REMARK 3 S21: 0.0147 S22: -0.0249 S23: -0.0504 REMARK 3 S31: -0.1117 S32: 0.2112 S33: -0.0170 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 194 B 258 REMARK 3 ORIGIN FOR THE GROUP (A): -26.2404 18.7460 48.2504 REMARK 3 T TENSOR REMARK 3 T11: 0.0110 T22: 0.0312 REMARK 3 T33: 0.0483 T12: -0.0013 REMARK 3 T13: 0.0159 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.5140 L22: 0.7412 REMARK 3 L33: 1.1579 L12: 0.1695 REMARK 3 L13: 0.1470 L23: 0.3658 REMARK 3 S TENSOR REMARK 3 S11: 0.0367 S12: -0.0211 S13: -0.0459 REMARK 3 S21: 0.0422 S22: -0.0312 S23: 0.0608 REMARK 3 S31: 0.0199 S32: 0.0412 S33: -0.0055 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 259 B 268 REMARK 3 ORIGIN FOR THE GROUP (A): -22.6504 36.8410 31.3744 REMARK 3 T TENSOR REMARK 3 T11: 0.1084 T22: 0.1052 REMARK 3 T33: 0.0651 T12: 0.0014 REMARK 3 T13: 0.0023 T23: 0.0715 REMARK 3 L TENSOR REMARK 3 L11: 3.9394 L22: 4.0803 REMARK 3 L33: 1.0723 L12: 3.0852 REMARK 3 L13: -1.6109 L23: -0.8536 REMARK 3 S TENSOR REMARK 3 S11: -0.0027 S12: 0.0587 S13: 0.1632 REMARK 3 S21: -0.2011 S22: 0.0326 S23: 0.0815 REMARK 3 S31: -0.1065 S32: 0.0296 S33: -0.0300 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7L6Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1000253806. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : BE REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 92003 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.280 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : 0.07900 REMARK 200 FOR THE DATA SET : 37.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : 0.79900 REMARK 200 R SYM FOR SHELL (I) : 0.79900 REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 8.8 MG/ML, 0.01M TRIS HCL (PH REMARK 280 8.3);SCREEN: CLASSICS II (D10), 0.1M BIS-TRIS (PH 6.5), 20% (W/V) REMARK 280 PEG5000 MME., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 34.12550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.26600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 34.12550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.26600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 57 REMARK 465 ASN A 58 REMARK 465 ALA A 59 REMARK 465 SER B 57 REMARK 465 ASN B 58 REMARK 465 ALA B 59 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 232 CG - SE - CE ANGL. DEV. = 17.8 DEGREES REMARK 500 MSE B 232 CG - SE - CE ANGL. DEV. = 20.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 124 -89.55 -138.47 REMARK 500 PHE A 124 -83.72 -138.47 REMARK 500 HIS A 165 43.75 -78.58 REMARK 500 ASN A 178 31.09 75.59 REMARK 500 PHE B 124 -83.82 -140.72 REMARK 500 PHE B 124 -82.54 -140.72 REMARK 500 LYS B 145 -48.48 -132.88 REMARK 500 HIS B 165 45.31 -78.71 REMARK 500 ASN B 178 30.61 76.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 538 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH B 566 DISTANCE = 6.56 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP97057 RELATED DB: TARGETTRACK DBREF 7L6Y A 59 268 UNP Q1JI83 Q1JI83_STRPD 59 268 DBREF 7L6Y B 59 268 UNP Q1JI83 Q1JI83_STRPD 59 268 SEQADV 7L6Y SER A 57 UNP Q1JI83 EXPRESSION TAG SEQADV 7L6Y ASN A 58 UNP Q1JI83 EXPRESSION TAG SEQADV 7L6Y SER B 57 UNP Q1JI83 EXPRESSION TAG SEQADV 7L6Y ASN B 58 UNP Q1JI83 EXPRESSION TAG SEQRES 1 A 212 SER ASN ALA ASP ALA SER GLN PHE PRO GLN LEU THR LYS SEQRES 2 A 212 GLU VAL GLY LYS GLU GLU ALA LYS VAL VAL MSE ARG THR SEQRES 3 A 212 SER GLN GLY ASP ILE THR LEU LYS LEU PHE PRO LYS TYR SEQRES 4 A 212 ALA PRO LEU ALA VAL GLU ASN PHE LEU THR HIS ALA LYS SEQRES 5 A 212 LYS GLY TYR TYR ASP ASN LEU THR PHE HIS ARG VAL ILE SEQRES 6 A 212 ASN ASP PHE MSE ILE GLN SER GLY ASP PRO LYS GLY ASP SEQRES 7 A 212 GLY THR GLY GLY GLU SER ILE TRP LYS GLY LYS ASP PRO SEQRES 8 A 212 LYS LYS ASP ALA GLY ASN GLY PHE VAL ASN GLU ILE SER SEQRES 9 A 212 PRO PHE LEU TYR HIS ILE ARG GLY ALA LEU ALA MSE ALA SEQRES 10 A 212 ASN ALA GLY ALA ASN THR ASN GLY SER GLN PHE TYR ILE SEQRES 11 A 212 ASN GLN ASN LYS LYS ASN GLN SER LYS GLY LEU SER SER SEQRES 12 A 212 THR ASN TYR PRO LYS PRO ILE ILE SER ALA TYR GLU HIS SEQRES 13 A 212 GLY GLY ASN PRO SER LEU ASP GLY GLY TYR THR VAL PHE SEQRES 14 A 212 GLY GLN VAL ILE ASP GLY MSE ASP VAL VAL ASP LYS ILE SEQRES 15 A 212 ALA ALA THR SER ILE ASN GLN ASN ASP LYS PRO GLU GLN SEQRES 16 A 212 ASP ILE THR ILE THR SER ILE ASP ILE VAL LYS ASP TYR SEQRES 17 A 212 ARG PHE LYS ASN SEQRES 1 B 212 SER ASN ALA ASP ALA SER GLN PHE PRO GLN LEU THR LYS SEQRES 2 B 212 GLU VAL GLY LYS GLU GLU ALA LYS VAL VAL MSE ARG THR SEQRES 3 B 212 SER GLN GLY ASP ILE THR LEU LYS LEU PHE PRO LYS TYR SEQRES 4 B 212 ALA PRO LEU ALA VAL GLU ASN PHE LEU THR HIS ALA LYS SEQRES 5 B 212 LYS GLY TYR TYR ASP ASN LEU THR PHE HIS ARG VAL ILE SEQRES 6 B 212 ASN ASP PHE MSE ILE GLN SER GLY ASP PRO LYS GLY ASP SEQRES 7 B 212 GLY THR GLY GLY GLU SER ILE TRP LYS GLY LYS ASP PRO SEQRES 8 B 212 LYS LYS ASP ALA GLY ASN GLY PHE VAL ASN GLU ILE SER SEQRES 9 B 212 PRO PHE LEU TYR HIS ILE ARG GLY ALA LEU ALA MSE ALA SEQRES 10 B 212 ASN ALA GLY ALA ASN THR ASN GLY SER GLN PHE TYR ILE SEQRES 11 B 212 ASN GLN ASN LYS LYS ASN GLN SER LYS GLY LEU SER SER SEQRES 12 B 212 THR ASN TYR PRO LYS PRO ILE ILE SER ALA TYR GLU HIS SEQRES 13 B 212 GLY GLY ASN PRO SER LEU ASP GLY GLY TYR THR VAL PHE SEQRES 14 B 212 GLY GLN VAL ILE ASP GLY MSE ASP VAL VAL ASP LYS ILE SEQRES 15 B 212 ALA ALA THR SER ILE ASN GLN ASN ASP LYS PRO GLU GLN SEQRES 16 B 212 ASP ILE THR ILE THR SER ILE ASP ILE VAL LYS ASP TYR SEQRES 17 B 212 ARG PHE LYS ASN MODRES 7L6Y MSE A 80 MET MODIFIED RESIDUE MODRES 7L6Y MSE A 125 MET MODIFIED RESIDUE MODRES 7L6Y MSE A 172 MET MODIFIED RESIDUE MODRES 7L6Y MSE A 232 MET MODIFIED RESIDUE MODRES 7L6Y MSE B 80 MET MODIFIED RESIDUE MODRES 7L6Y MSE B 125 MET MODIFIED RESIDUE MODRES 7L6Y MSE B 172 MET MODIFIED RESIDUE MODRES 7L6Y MSE B 232 MET MODIFIED RESIDUE HET MSE A 80 8 HET MSE A 125 16 HET MSE A 172 8 HET MSE A 232 16 HET MSE B 80 16 HET MSE B 125 16 HET MSE B 172 8 HET MSE B 232 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 HOH *504(H2 O) HELIX 1 AA1 ASP A 60 THR A 68 5 9 HELIX 2 AA2 ALA A 96 LYS A 109 1 14 HELIX 3 AA3 SER A 198 TYR A 202 5 5 HELIX 4 AA4 PRO A 203 TYR A 210 1 8 HELIX 5 AA5 GLU A 211 GLY A 213 5 3 HELIX 6 AA6 ASN A 215 ASP A 219 5 5 HELIX 7 AA7 GLY A 231 THR A 241 1 11 HELIX 8 AA8 SER A 242 ILE A 243 5 2 HELIX 9 AA9 ASN A 244 LYS A 248 5 5 HELIX 10 AB1 ASP B 60 THR B 68 5 9 HELIX 11 AB2 ALA B 96 LYS B 109 1 14 HELIX 12 AB3 SER B 198 TYR B 202 5 5 HELIX 13 AB4 PRO B 203 TYR B 210 1 8 HELIX 14 AB5 GLU B 211 GLY B 213 5 3 HELIX 15 AB6 ASN B 215 ASP B 219 5 5 HELIX 16 AB7 GLY B 231 THR B 241 1 11 HELIX 17 AB8 SER B 242 ILE B 243 5 2 HELIX 18 AB9 ASN B 244 LYS B 248 5 5 SHEET 1 AA1 8 ARG A 119 ILE A 121 0 SHEET 2 AA1 8 MSE A 125 SER A 128 -1 O GLN A 127 N ARG A 119 SHEET 3 AA1 8 PHE A 184 ASN A 187 -1 O ILE A 186 N ILE A 126 SHEET 4 AA1 8 ALA A 169 MSE A 172 -1 N ALA A 171 O TYR A 185 SHEET 5 AA1 8 VAL A 224 ASP A 230 -1 O PHE A 225 N LEU A 170 SHEET 6 AA1 8 GLY A 85 LEU A 91 -1 N THR A 88 O ILE A 229 SHEET 7 AA1 8 ALA A 76 THR A 82 -1 N MSE A 80 O ILE A 87 SHEET 8 AA1 8 ILE A 255 LYS A 262 -1 O THR A 256 N ARG A 81 SHEET 1 AA2 8 ARG B 119 ILE B 121 0 SHEET 2 AA2 8 MSE B 125 SER B 128 -1 O GLN B 127 N ARG B 119 SHEET 3 AA2 8 PHE B 184 ASN B 187 -1 O ILE B 186 N ILE B 126 SHEET 4 AA2 8 ALA B 169 MSE B 172 -1 N ALA B 169 O ASN B 187 SHEET 5 AA2 8 VAL B 224 ASP B 230 -1 O PHE B 225 N LEU B 170 SHEET 6 AA2 8 GLY B 85 LEU B 91 -1 N THR B 88 O ILE B 229 SHEET 7 AA2 8 ALA B 76 THR B 82 -1 N MSE B 80 O ILE B 87 SHEET 8 AA2 8 ILE B 255 LYS B 262 -1 O THR B 256 N ARG B 81 LINK C VAL A 79 N MSE A 80 1555 1555 1.33 LINK C MSE A 80 N ARG A 81 1555 1555 1.33 LINK C PHE A 124 N AMSE A 125 1555 1555 1.34 LINK C PHE A 124 N BMSE A 125 1555 1555 1.34 LINK C AMSE A 125 N ILE A 126 1555 1555 1.34 LINK C BMSE A 125 N ILE A 126 1555 1555 1.34 LINK C ALA A 171 N MSE A 172 1555 1555 1.34 LINK C MSE A 172 N ALA A 173 1555 1555 1.34 LINK C GLY A 231 N AMSE A 232 1555 1555 1.34 LINK C GLY A 231 N BMSE A 232 1555 1555 1.33 LINK C AMSE A 232 N ASP A 233 1555 1555 1.34 LINK C BMSE A 232 N ASP A 233 1555 1555 1.34 LINK C VAL B 79 N AMSE B 80 1555 1555 1.33 LINK C VAL B 79 N BMSE B 80 1555 1555 1.33 LINK C AMSE B 80 N ARG B 81 1555 1555 1.34 LINK C BMSE B 80 N ARG B 81 1555 1555 1.33 LINK C PHE B 124 N AMSE B 125 1555 1555 1.34 LINK C PHE B 124 N BMSE B 125 1555 1555 1.34 LINK C AMSE B 125 N ILE B 126 1555 1555 1.33 LINK C BMSE B 125 N ILE B 126 1555 1555 1.34 LINK C ALA B 171 N MSE B 172 1555 1555 1.34 LINK C MSE B 172 N ALA B 173 1555 1555 1.33 LINK C GLY B 231 N MSE B 232 1555 1555 1.34 LINK C MSE B 232 N ASP B 233 1555 1555 1.34 CRYST1 68.251 50.532 106.977 90.00 92.32 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014652 0.000000 0.000594 0.00000 SCALE2 0.000000 0.019789 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009355 0.00000