HEADER HYDROLASE 01-JAN-21 7L91 TITLE STRUCTURE OF METALLO BETA-LACTAMASE L1 IN A COMPLEX WITH HYDROLYZED TITLE 2 MOXALACTAM DETERMINED BY PINK-BEAM SERIAL CRYSTALLOGRAPHY COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE METALLO-BETA-LACTAMASE L1 (BETA-LACTAMASE TYPE II) COMPND 3 (EC 3.5.2.6) (PENICILLINASE); COMPND 4 CHAIN: A; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STENOTROPHOMONAS MALTOPHILIA (STRAIN K279A); SOURCE 3 ORGANISM_TAXID: 522373; SOURCE 4 STRAIN: K279A; SOURCE 5 GENE: SMLT2667; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS METALLO BETA LACTAMASE, MOXALACTAM, SERIAL CRYSTALLOGRAPHY, KEYWDS 2 STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 3 DISEASES, HYDROLASE, CSGID EXPDTA X-RAY DIFFRACTION AUTHOR M.WILAMOWSKI,Y.KIM,D.A.SHERRELL,A.LAVENS,R.HENNING,N.MALTSEVA, AUTHOR 2 M.ENDRES,G.BABNIGG,S.VUKICA,A.JOACHIMIAK,CENTER FOR STRUCTURAL AUTHOR 3 GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 4 25-OCT-23 7L91 1 REMARK REVDAT 3 08-FEB-23 7L91 1 JRNL REVDAT 2 16-MAR-22 7L91 1 REMARK SEQRES REVDAT 1 09-FEB-22 7L91 0 JRNL AUTH M.WILAMOWSKI,D.A.SHERRELL,Y.KIM,A.LAVENS,R.W.HENNING, JRNL AUTH 2 K.LAZARSKI,A.SHIGEMOTO,M.ENDRES,N.MALTSEVA,G.BABNIGG, JRNL AUTH 3 S.C.BURDETTE,V.SRAJER,A.JOACHIMIAK JRNL TITL TIME-RESOLVED BETA-LACTAM CLEAVAGE BY L1 JRNL TITL 2 METALLO-BETA-LACTAMASE. JRNL REF NAT COMMUN V. 13 7379 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 36450742 JRNL DOI 10.1038/S41467-022-35029-3 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 85.7 REMARK 3 NUMBER OF REFLECTIONS : 14723 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.250 REMARK 3 FREE R VALUE TEST SET COUNT : 773 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.0300 - 4.0000 0.97 2797 175 0.1415 0.1660 REMARK 3 2 4.0000 - 3.1700 0.96 2654 115 0.1647 0.2012 REMARK 3 3 3.1700 - 2.7700 0.93 2497 151 0.2152 0.2397 REMARK 3 4 2.7700 - 2.5200 0.88 2347 130 0.2297 0.2747 REMARK 3 5 2.5200 - 2.3400 0.80 2109 115 0.2278 0.2338 REMARK 3 6 2.3400 - 2.2000 0.59 1546 87 0.2030 0.2216 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.212 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.721 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2075 REMARK 3 ANGLE : 0.627 2838 REMARK 3 CHIRALITY : 0.042 315 REMARK 3 PLANARITY : 0.004 374 REMARK 3 DIHEDRAL : 19.033 753 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.4509 13.5244 9.4950 REMARK 3 T TENSOR REMARK 3 T11: 0.1825 T22: 0.1478 REMARK 3 T33: 0.1631 T12: 0.0447 REMARK 3 T13: 0.0135 T23: 0.0227 REMARK 3 L TENSOR REMARK 3 L11: 0.8842 L22: 4.4727 REMARK 3 L33: 2.6788 L12: 0.4780 REMARK 3 L13: 0.7072 L23: 2.9637 REMARK 3 S TENSOR REMARK 3 S11: -0.0698 S12: -0.1615 S13: 0.2835 REMARK 3 S21: 0.1315 S22: -0.1224 S23: 0.6283 REMARK 3 S31: -0.1291 S32: -0.3624 S33: 0.1976 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.3843 13.8867 6.5551 REMARK 3 T TENSOR REMARK 3 T11: 0.1267 T22: 0.1295 REMARK 3 T33: 0.1428 T12: 0.0035 REMARK 3 T13: -0.0140 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 1.2096 L22: 3.4369 REMARK 3 L33: 1.9905 L12: -0.6645 REMARK 3 L13: -0.0867 L23: -0.1111 REMARK 3 S TENSOR REMARK 3 S11: -0.0179 S12: 0.0658 S13: 0.0768 REMARK 3 S21: -0.1774 S22: -0.0654 S23: -0.0630 REMARK 3 S31: -0.0798 S32: -0.0479 S33: 0.0616 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.2511 14.5362 17.0511 REMARK 3 T TENSOR REMARK 3 T11: 0.2108 T22: 0.0873 REMARK 3 T33: 0.2097 T12: 0.0469 REMARK 3 T13: -0.0335 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 1.0655 L22: 1.4248 REMARK 3 L33: 0.9339 L12: -0.1463 REMARK 3 L13: 0.2135 L23: 0.0440 REMARK 3 S TENSOR REMARK 3 S11: -0.1177 S12: 0.0191 S13: 0.2101 REMARK 3 S21: 0.1639 S22: -0.0431 S23: -0.0261 REMARK 3 S31: -0.1877 S32: -0.0384 S33: 0.1077 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 205 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.2729 -4.9821 21.8940 REMARK 3 T TENSOR REMARK 3 T11: 0.2593 T22: 0.0960 REMARK 3 T33: 0.2389 T12: -0.0056 REMARK 3 T13: 0.0507 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 4.3176 L22: 7.7483 REMARK 3 L33: 1.1772 L12: 1.2386 REMARK 3 L13: 0.6485 L23: -0.8321 REMARK 3 S TENSOR REMARK 3 S11: -0.0533 S12: 0.2097 S13: -0.3616 REMARK 3 S21: 0.2355 S22: 0.1034 S23: 0.6537 REMARK 3 S31: -0.0867 S32: -0.0586 S33: -0.0477 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 223 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.5726 2.2138 29.0452 REMARK 3 T TENSOR REMARK 3 T11: 0.3736 T22: 0.1303 REMARK 3 T33: 0.1602 T12: 0.0684 REMARK 3 T13: 0.0161 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 8.3868 L22: 5.4152 REMARK 3 L33: 0.4430 L12: 4.9437 REMARK 3 L13: 1.8733 L23: 1.1351 REMARK 3 S TENSOR REMARK 3 S11: -0.3909 S12: -0.3217 S13: -0.1604 REMARK 3 S21: 0.4471 S22: 0.3132 S23: 0.0411 REMARK 3 S31: 0.5029 S32: 0.0629 S33: 0.1274 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 236 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.5701 19.6325 23.9652 REMARK 3 T TENSOR REMARK 3 T11: 0.2935 T22: 0.2031 REMARK 3 T33: 0.2924 T12: 0.0951 REMARK 3 T13: 0.0256 T23: -0.0325 REMARK 3 L TENSOR REMARK 3 L11: 1.0643 L22: 4.5690 REMARK 3 L33: 2.1673 L12: 0.3233 REMARK 3 L13: 0.1875 L23: 0.0057 REMARK 3 S TENSOR REMARK 3 S11: 0.0995 S12: -0.2410 S13: 0.4693 REMARK 3 S21: 0.0004 S22: 0.1148 S23: 0.0689 REMARK 3 S31: -0.5163 S32: -0.3146 S33: -0.2119 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 287 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.6912 1.2494 31.1336 REMARK 3 T TENSOR REMARK 3 T11: 0.2989 T22: 0.3029 REMARK 3 T33: 0.1751 T12: 0.0858 REMARK 3 T13: 0.0770 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 6.3359 L22: 4.8290 REMARK 3 L33: 7.0484 L12: 0.0823 REMARK 3 L13: -1.3559 L23: -0.8901 REMARK 3 S TENSOR REMARK 3 S11: -0.3115 S12: -0.2155 S13: -0.1957 REMARK 3 S21: 0.7835 S22: 0.3266 S23: 0.3520 REMARK 3 S31: 0.3633 S32: -0.5287 S33: 0.0191 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7L91 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1000253832. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 295 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 7816 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : L REMARK 200 WAVELENGTH OR RANGE (A) : 1.02-1.18 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX340-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PRECOGNITION REMARK 200 DATA SCALING SOFTWARE : EPINORM REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14754 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 33.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.4 REMARK 200 DATA REDUNDANCY : 35.40 REMARK 200 R MERGE (I) : 0.13200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.5100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.12200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 15.96 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: LAUE REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 7L52 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BATCH CRYSTALLIZATION DONE IN REMARK 280 POLYPROPYLENE TUBES. 200 UL OF THE L1 (48 MG/ML) IN A BUFFER REMARK 280 0.015 TRIS, 0.1 M KCL, 1.5 MM TCEP, 5 MM ZNCL2 PH 7.0 WAS ADDED REMARK 280 TO 200 UL OF 0.15 M SODIUM MALONATE PH 8.0, 20% (W/V) PEG3350., REMARK 280 BATCH MODE, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.03333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 66.06667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 33.03333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 66.06667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 33.03333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 66.06667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 33.03333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 66.06667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 105.85300 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 105.85300 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 434 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 471 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 16 REMARK 465 ASN A 17 REMARK 465 ALA A 18 REMARK 465 ALA A 19 REMARK 465 SER A 20 REMARK 465 ALA A 21 REMARK 465 ALA A 22 REMARK 465 GLU A 23 REMARK 465 GLY A 288 REMARK 465 THR A 289 REMARK 465 ARG A 290 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 74 157.49 67.75 REMARK 500 ALA A 106 55.37 -92.41 REMARK 500 HIS A 110 -31.52 -133.14 REMARK 500 ASP A 192 -167.41 -112.42 REMARK 500 PRO A 210 99.75 -66.91 REMARK 500 TYR A 220 70.63 -157.68 REMARK 500 LYS A 259 23.31 -75.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 105 NE2 REMARK 620 2 HIS A 107 ND1 94.2 REMARK 620 3 HIS A 181 NE2 100.0 105.5 REMARK 620 4 XQP A 303 O10 171.7 92.4 83.0 REMARK 620 5 HOH A 402 O 98.8 108.6 139.4 74.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 109 OD2 REMARK 620 2 HIS A 110 NE2 89.8 REMARK 620 3 HIS A 246 NE2 87.8 100.2 REMARK 620 4 XQP A 303 N1 100.4 168.9 84.6 REMARK 620 5 XQP A 303 O8 168.5 100.9 86.1 69.3 REMARK 620 6 HOH A 402 O 88.8 93.6 165.8 82.5 94.7 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7L52 RELATED DB: PDB REMARK 900 STRUCTURE OF L1 WITH TWO ZINCS WITHOUT ANTIBIOTIC REMARK 900 RELATED ID: IDP97218 RELATED DB: TARGETDB DBREF 7L91 A 19 290 UNP B2FTM1 B2FTM1_STRMK 19 290 SEQADV 7L91 SER A 16 UNP B2FTM1 EXPRESSION TAG SEQADV 7L91 ASN A 17 UNP B2FTM1 EXPRESSION TAG SEQADV 7L91 ALA A 18 UNP B2FTM1 EXPRESSION TAG SEQRES 1 A 275 SER ASN ALA ALA SER ALA ALA GLU ALA PRO LEU PRO GLN SEQRES 2 A 275 LEU ARG ALA TYR THR VAL ASP ALA SER TRP LEU GLN PRO SEQRES 3 A 275 MET ALA PRO LEU GLN VAL ALA ASP HIS THR TRP GLN ILE SEQRES 4 A 275 GLY THR GLU ASP LEU THR ALA LEU LEU VAL GLN THR ALA SEQRES 5 A 275 GLU GLY ALA VAL LEU LEU ASP GLY GLY MET PRO GLN MET SEQRES 6 A 275 ALA GLY HIS LEU LEU ASP ASN MET LYS LEU ARG GLY VAL SEQRES 7 A 275 ALA PRO GLN ASP LEU ARG LEU ILE LEU LEU SER HIS ALA SEQRES 8 A 275 HIS ALA ASP HIS ALA GLY PRO VAL ALA GLU LEU LYS ARG SEQRES 9 A 275 ARG THR GLY ALA HIS VAL ALA ALA ASN ALA GLU THR ALA SEQRES 10 A 275 VAL LEU LEU ALA ARG GLY GLY SER ASN ASP LEU HIS PHE SEQRES 11 A 275 GLY ASP GLY ILE THR TYR PRO PRO ALA SER ALA ASP ARG SEQRES 12 A 275 ILE ILE MET ASP GLY GLU VAL VAL THR VAL GLY GLY ILE SEQRES 13 A 275 ALA PHE THR ALA HIS PHE MET PRO GLY HIS THR PRO GLY SEQRES 14 A 275 SER THR ALA TRP THR TRP THR ASP THR ARG ASP GLY LYS SEQRES 15 A 275 PRO VAL ARG ILE ALA TYR ALA ASP SER LEU SER ALA PRO SEQRES 16 A 275 GLY TYR GLN LEU LYS GLY ASN PRO ARG TYR PRO ARG LEU SEQRES 17 A 275 ILE GLU ASP TYR LYS ARG SER PHE ALA THR VAL ARG ALA SEQRES 18 A 275 LEU PRO CYS ASP LEU LEU LEU THR PRO HIS PRO GLY ALA SEQRES 19 A 275 SER ASN TRP ASN TYR ALA VAL GLY SER LYS ALA SER ALA SEQRES 20 A 275 GLU ALA LEU THR CYS ASN ALA TYR ALA ASP ALA ALA GLU SEQRES 21 A 275 LYS LYS PHE ASP ALA GLN LEU ALA ARG GLU THR ALA GLY SEQRES 22 A 275 THR ARG HET ZN A 301 1 HET ZN A 302 1 HET XQP A 303 37 HETNAM ZN ZINC ION HETNAM XQP (2R)-2-[(R)-CARBOXY{[(2R)-2-CARBOXY-2-(4- HETNAM 2 XQP HYDROXYPHENYL)ACETYL]AMINO}METHOXYMETHYL]-5-{[(1- HETNAM 3 XQP METHYL-1H-TETRAZOL-5-YL)SULFANYL]METHYL}-3,6-DIHYDRO- HETNAM 4 XQP 2H-1,3-OXAZINE-4-CARBOXYLIC ACID FORMUL 2 ZN 2(ZN 2+) FORMUL 4 XQP C20 H22 N6 O10 S FORMUL 5 HOH *71(H2 O) HELIX 1 AA1 ASP A 35 GLN A 40 5 6 HELIX 2 AA2 MET A 77 GLN A 79 5 3 HELIX 3 AA3 MET A 80 ARG A 91 1 12 HELIX 4 AA4 ALA A 94 GLN A 96 5 3 HELIX 5 AA5 HIS A 107 GLY A 112 1 6 HELIX 6 AA6 PRO A 113 GLY A 122 1 10 HELIX 7 AA7 ASN A 128 ARG A 137 1 10 HELIX 8 AA8 ARG A 222 ALA A 236 1 15 HELIX 9 AA9 HIS A 246 ASN A 251 5 6 HELIX 10 AB1 ASN A 253 ALA A 262 5 10 HELIX 11 AB2 THR A 266 ALA A 287 1 22 SHEET 1 AA1 7 LEU A 45 GLN A 46 0 SHEET 2 AA1 7 THR A 51 GLN A 53 -1 O GLN A 53 N LEU A 45 SHEET 3 AA1 7 LEU A 62 THR A 66 -1 O LEU A 63 N TRP A 52 SHEET 4 AA1 7 GLY A 69 LEU A 73 -1 O VAL A 71 N VAL A 64 SHEET 5 AA1 7 LEU A 98 LEU A 102 1 O LEU A 102 N LEU A 72 SHEET 6 AA1 7 HIS A 124 ALA A 127 1 O HIS A 124 N ILE A 101 SHEET 7 AA1 7 ARG A 158 ILE A 159 1 O ARG A 158 N ALA A 127 SHEET 1 AA2 5 VAL A 165 VAL A 168 0 SHEET 2 AA2 5 ILE A 171 PHE A 177 -1 O PHE A 173 N VAL A 166 SHEET 3 AA2 5 THR A 186 ARG A 194 -1 O ALA A 187 N HIS A 176 SHEET 4 AA2 5 LYS A 197 TYR A 203 -1 O TYR A 203 N TRP A 188 SHEET 5 AA2 5 LEU A 241 LEU A 243 1 O LEU A 243 N ALA A 202 LINK NE2 HIS A 105 ZN ZN A 301 1555 1555 2.07 LINK ND1 HIS A 107 ZN ZN A 301 1555 1555 2.11 LINK OD2 ASP A 109 ZN ZN A 302 1555 1555 2.19 LINK NE2 HIS A 110 ZN ZN A 302 1555 1555 2.04 LINK NE2 HIS A 181 ZN ZN A 301 1555 1555 1.98 LINK NE2 HIS A 246 ZN ZN A 302 1555 1555 2.24 LINK ZN ZN A 301 O10 XQP A 303 1555 1555 2.18 LINK ZN ZN A 301 O HOH A 402 1555 1555 1.94 LINK ZN ZN A 302 N1 XQP A 303 1555 1555 2.31 LINK ZN ZN A 302 O8 XQP A 303 1555 1555 2.38 LINK ZN ZN A 302 O HOH A 402 1555 1555 2.17 CRYST1 105.853 105.853 99.100 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009447 0.005454 0.000000 0.00000 SCALE2 0.000000 0.010909 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010091 0.00000