HEADER CELL CYCLE 08-JAN-21 7LBP TITLE CRYSTAL STRUCTURE OF HUMAN SURVIVIN BOUND TO HISTONE H3T3PHK4AC TITLE 2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 5; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: APOPTOSIS INHIBITOR 4,APOPTOSIS INHIBITOR SURVIVIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HISTONE H3T3PHK4AC PEPTIDE; COMPND 8 CHAIN: B, D; COMPND 9 SYNONYM: HISTONE H3/A,HISTONE H3/B,HISTONE H3/C,HISTONE H3/D,HISTONE COMPND 10 H3/F,HISTONE H3/H,HISTONE H3/I,HISTONE H3/J,HISTONE H3/K,HISTONE COMPND 11 H3/L; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BIRC5, API4, IAP4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS LYSINE ACETYLATION, THREONINE PHOSPHORYLATION, HISTONE H3, CPC, CELL KEYWDS 2 CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR E.NIEDZIALKOWSKA,W.MINOR,P.T.STUKENBERG REVDAT 5 15-NOV-23 7LBP 1 REMARK REVDAT 4 18-OCT-23 7LBP 1 REMARK REVDAT 3 03-AUG-22 7LBP 1 JRNL REVDAT 2 27-JUL-22 7LBP 1 JRNL REVDAT 1 12-JAN-22 7LBP 0 JRNL AUTH E.NIEDZIALKOWSKA,L.LIU,C.KUSCU,Z.MAYO,W.MINOR,B.D.STRAHL, JRNL AUTH 2 M.ADLI,P.T.STUKENBERG JRNL TITL TIP60 ACETYLATION OF HISTONE H3K4 TEMPORALLY CONTROLS JRNL TITL 2 CHROMOSOME PASSENGER COMPLEX LOCALIZATION. JRNL REF MOL.BIOL.CELL V. 33 BR15 2022 JRNL REFN ESSN 1939-4586 JRNL PMID 35653296 JRNL DOI 10.1091/MBC.E21-06-0283 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 14821 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 780 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1045 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.3410 REMARK 3 BIN FREE R VALUE SET COUNT : 58 REMARK 3 BIN FREE R VALUE : 0.4180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2230 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 5 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 105.7 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.39000 REMARK 3 B22 (A**2) : -0.59000 REMARK 3 B33 (A**2) : 0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.347 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.255 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.227 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.202 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2286 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2032 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3101 ; 1.377 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4691 ; 0.892 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 283 ; 5.505 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;34.525 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 349 ;15.686 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;20.545 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 330 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2604 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 517 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 5 140 C 5 140 6691 0.090 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 11 REMARK 3 ORIGIN FOR THE GROUP (A): 14.2870 -4.2260 17.1710 REMARK 3 T TENSOR REMARK 3 T11: 0.6719 T22: 0.7885 REMARK 3 T33: 0.9684 T12: 0.1231 REMARK 3 T13: 0.0315 T23: 0.3775 REMARK 3 L TENSOR REMARK 3 L11: 18.5156 L22: 12.9903 REMARK 3 L33: 9.3710 L12: 15.2330 REMARK 3 L13: -12.6307 L23: -10.9739 REMARK 3 S TENSOR REMARK 3 S11: -0.0388 S12: 0.1775 S13: 0.7496 REMARK 3 S21: -0.2030 S22: -0.2305 S23: 0.0086 REMARK 3 S31: 0.2585 S32: 0.3939 S33: 0.2693 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 12 A 93 REMARK 3 ORIGIN FOR THE GROUP (A): 2.3480 -17.5000 23.5730 REMARK 3 T TENSOR REMARK 3 T11: 0.3992 T22: 0.4324 REMARK 3 T33: 0.0575 T12: -0.0177 REMARK 3 T13: -0.1211 T23: 0.0600 REMARK 3 L TENSOR REMARK 3 L11: 4.0789 L22: 8.1206 REMARK 3 L33: 2.3256 L12: 0.5503 REMARK 3 L13: -1.4366 L23: -0.7124 REMARK 3 S TENSOR REMARK 3 S11: -0.0502 S12: -0.1524 S13: -0.0867 REMARK 3 S21: 0.1819 S22: 0.1037 S23: 0.2557 REMARK 3 S31: 0.1867 S32: -0.1343 S33: -0.0536 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 94 A 122 REMARK 3 ORIGIN FOR THE GROUP (A): 1.6490 -1.1540 24.5200 REMARK 3 T TENSOR REMARK 3 T11: 0.4791 T22: 0.3774 REMARK 3 T33: 0.1911 T12: -0.0070 REMARK 3 T13: -0.0762 T23: 0.0324 REMARK 3 L TENSOR REMARK 3 L11: 1.8149 L22: 0.2942 REMARK 3 L33: 19.3306 L12: 0.0977 REMARK 3 L13: -3.0115 L23: -1.9854 REMARK 3 S TENSOR REMARK 3 S11: -0.0396 S12: 0.0367 S13: 0.3230 REMARK 3 S21: 0.1506 S22: 0.0305 S23: -0.0037 REMARK 3 S31: -0.3213 S32: -0.2065 S33: 0.0092 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 123 A 141 REMARK 3 ORIGIN FOR THE GROUP (A): -1.9760 -4.8230 58.2630 REMARK 3 T TENSOR REMARK 3 T11: 0.2718 T22: 0.4468 REMARK 3 T33: 0.2207 T12: 0.0402 REMARK 3 T13: -0.1329 T23: -0.0283 REMARK 3 L TENSOR REMARK 3 L11: 6.7276 L22: 8.0262 REMARK 3 L33: 17.0318 L12: 0.5215 REMARK 3 L13: -0.5541 L23: -0.5863 REMARK 3 S TENSOR REMARK 3 S11: -0.0844 S12: -0.2678 S13: 0.0721 REMARK 3 S21: -0.1421 S22: 0.1096 S23: 0.0459 REMARK 3 S31: 0.3489 S32: 0.1797 S33: -0.0252 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 5 C 11 REMARK 3 ORIGIN FOR THE GROUP (A): 15.3050 5.5180 14.9940 REMARK 3 T TENSOR REMARK 3 T11: 0.7416 T22: 0.5542 REMARK 3 T33: 0.3995 T12: -0.0180 REMARK 3 T13: -0.1361 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 11.7049 L22: 8.8472 REMARK 3 L33: 20.8287 L12: 9.2810 REMARK 3 L13: -11.2558 L23: -5.9264 REMARK 3 S TENSOR REMARK 3 S11: 0.0619 S12: -0.6512 S13: -0.2159 REMARK 3 S21: 0.4723 S22: -0.4627 S23: 0.0942 REMARK 3 S31: 0.5970 S32: -0.5297 S33: 0.4007 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 12 C 91 REMARK 3 ORIGIN FOR THE GROUP (A): 20.5700 18.0000 1.2480 REMARK 3 T TENSOR REMARK 3 T11: 0.3598 T22: 0.4612 REMARK 3 T33: 0.1966 T12: -0.0174 REMARK 3 T13: -0.1416 T23: 0.0698 REMARK 3 L TENSOR REMARK 3 L11: 5.0488 L22: 7.4428 REMARK 3 L33: 2.2919 L12: 0.0536 REMARK 3 L13: 0.3052 L23: -0.6033 REMARK 3 S TENSOR REMARK 3 S11: -0.1371 S12: 0.1296 S13: 0.5965 REMARK 3 S21: -0.0534 S22: 0.1338 S23: -0.5856 REMARK 3 S31: -0.2064 S32: 0.3937 S33: 0.0034 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 92 C 123 REMARK 3 ORIGIN FOR THE GROUP (A): 20.5190 1.7630 2.9410 REMARK 3 T TENSOR REMARK 3 T11: 0.4035 T22: 0.3749 REMARK 3 T33: 0.3425 T12: 0.0420 REMARK 3 T13: -0.0799 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 22.1749 L22: 0.6207 REMARK 3 L33: 2.4348 L12: 3.2622 REMARK 3 L13: -4.9085 L23: -0.7219 REMARK 3 S TENSOR REMARK 3 S11: 0.0342 S12: -0.5351 S13: -0.2344 REMARK 3 S21: -0.0375 S22: -0.0215 S23: -0.2264 REMARK 3 S31: 0.0736 S32: 0.0826 S33: -0.0128 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 124 C 142 REMARK 3 ORIGIN FOR THE GROUP (A): 56.8960 4.1420 -5.1050 REMARK 3 T TENSOR REMARK 3 T11: 0.4890 T22: 0.6644 REMARK 3 T33: 0.2071 T12: -0.0306 REMARK 3 T13: -0.1020 T23: 0.0467 REMARK 3 L TENSOR REMARK 3 L11: 10.0062 L22: 11.3842 REMARK 3 L33: 2.7795 L12: 7.2882 REMARK 3 L13: 1.9346 L23: -2.0082 REMARK 3 S TENSOR REMARK 3 S11: -0.3368 S12: 1.5473 S13: 0.2410 REMARK 3 S21: -0.2377 S22: 0.2167 S23: -0.0603 REMARK 3 S31: -0.1980 S32: 0.4739 S33: 0.1201 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 7LBP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1000254049. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15604 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.42700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3UEC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 UL OF PROTEIN AT 10MG/ML WAS MIXED REMARK 280 WITH 1 UL OF BUFFER COMPOSED OF 0.16 M POTASSIUM/SODIUM TARTRATE, REMARK 280 12% PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 56.55850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.49400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 56.55850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.49400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 GLU A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ALA A 3 REMARK 465 PRO A 4 REMARK 465 ASP A 142 REMARK 465 ALA B 7 REMARK 465 ARG B 8 REMARK 465 LYS B 9 REMARK 465 SER B 10 REMARK 465 THR B 11 REMARK 465 GLY B 12 REMARK 465 GLY C -3 REMARK 465 SER C -2 REMARK 465 HIS C -1 REMARK 465 GLU C 0 REMARK 465 MET C 1 REMARK 465 GLY C 2 REMARK 465 ALA C 3 REMARK 465 PRO C 4 REMARK 465 ALA D 7 REMARK 465 ARG D 8 REMARK 465 LYS D 9 REMARK 465 SER D 10 REMARK 465 THR D 11 REMARK 465 GLY D 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 23 CG CD CE NZ REMARK 470 ARG A 37 CZ NH1 NH2 REMARK 470 GLU A 49 CG CD OE1 OE2 REMARK 470 LYS A 78 CE NZ REMARK 470 LYS A 79 CD CE NZ REMARK 470 LYS A 90 CG CD CE NZ REMARK 470 GLU A 95 CG CD OE1 OE2 REMARK 470 LYS A 103 CE NZ REMARK 470 LYS A 110 CE NZ REMARK 470 GLU A 116 CG CD OE1 OE2 REMARK 470 LYS A 129 CD CE NZ REMARK 470 LYS A 130 CD CE NZ REMARK 470 ARG A 133 CD NE CZ NH1 NH2 REMARK 470 GLN A 137 CG CD OE1 NE2 REMARK 470 MET A 141 CG SD CE REMARK 470 LYS C 15 CE NZ REMARK 470 LYS C 23 CG CD CE NZ REMARK 470 ARG C 37 NE CZ NH1 NH2 REMARK 470 GLU C 49 CG CD OE1 OE2 REMARK 470 GLU C 75 CG CD OE1 OE2 REMARK 470 LYS C 78 CD CE NZ REMARK 470 LYS C 79 CG CD CE NZ REMARK 470 LYS C 90 CG CD CE NZ REMARK 470 LYS C 103 CG CD CE NZ REMARK 470 LYS C 110 CG CD CE NZ REMARK 470 LYS C 112 NZ REMARK 470 LYS C 115 CE NZ REMARK 470 LYS C 121 CD CE NZ REMARK 470 LYS C 122 CG CD CE NZ REMARK 470 LYS C 129 CG CD CE NZ REMARK 470 ARG C 133 CG CD NE CZ NH1 NH2 REMARK 470 MET C 141 SD CE REMARK 470 ASP C 142 CG OD1 OD2 REMARK 470 ARG D 2 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 5 CG CD OE1 NE2 REMARK 470 THR D 6 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 28 -144.43 -114.36 REMARK 500 CYS A 33 58.88 -101.69 REMARK 500 CYS A 46 72.69 -153.42 REMARK 500 LEU C 28 -145.96 -115.25 REMARK 500 CYS C 33 58.27 -101.54 REMARK 500 CYS C 46 72.34 -153.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 57 SG REMARK 620 2 CYS A 60 SG 109.5 REMARK 620 3 HIS A 77 NE2 109.1 107.1 REMARK 620 4 CYS A 84 SG 119.7 100.4 110.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 57 SG REMARK 620 2 CYS C 60 SG 106.1 REMARK 620 3 HIS C 77 NE2 105.3 108.3 REMARK 620 4 CYS C 84 SG 117.0 105.8 113.7 REMARK 620 N 1 2 3 DBREF 7LBP A 1 142 UNP O15392 BIRC5_HUMAN 1 142 DBREF 7LBP B 1 12 UNP P68431 H31_HUMAN 2 13 DBREF 7LBP C 1 142 UNP O15392 BIRC5_HUMAN 1 142 DBREF 7LBP D 1 12 UNP P68431 H31_HUMAN 2 13 SEQADV 7LBP GLY A -3 UNP O15392 EXPRESSION TAG SEQADV 7LBP SER A -2 UNP O15392 EXPRESSION TAG SEQADV 7LBP HIS A -1 UNP O15392 EXPRESSION TAG SEQADV 7LBP GLU A 0 UNP O15392 EXPRESSION TAG SEQADV 7LBP GLY C -3 UNP O15392 EXPRESSION TAG SEQADV 7LBP SER C -2 UNP O15392 EXPRESSION TAG SEQADV 7LBP HIS C -1 UNP O15392 EXPRESSION TAG SEQADV 7LBP GLU C 0 UNP O15392 EXPRESSION TAG SEQRES 1 A 146 GLY SER HIS GLU MET GLY ALA PRO THR LEU PRO PRO ALA SEQRES 2 A 146 TRP GLN PRO PHE LEU LYS ASP HIS ARG ILE SER THR PHE SEQRES 3 A 146 LYS ASN TRP PRO PHE LEU GLU GLY CYS ALA CYS THR PRO SEQRES 4 A 146 GLU ARG MET ALA GLU ALA GLY PHE ILE HIS CYS PRO THR SEQRES 5 A 146 GLU ASN GLU PRO ASP LEU ALA GLN CYS PHE PHE CYS PHE SEQRES 6 A 146 LYS GLU LEU GLU GLY TRP GLU PRO ASP ASP ASP PRO ILE SEQRES 7 A 146 GLU GLU HIS LYS LYS HIS SER SER GLY CYS ALA PHE LEU SEQRES 8 A 146 SER VAL LYS LYS GLN PHE GLU GLU LEU THR LEU GLY GLU SEQRES 9 A 146 PHE LEU LYS LEU ASP ARG GLU ARG ALA LYS ASN LYS ILE SEQRES 10 A 146 ALA LYS GLU THR ASN ASN LYS LYS LYS GLU PHE GLU GLU SEQRES 11 A 146 THR ALA LYS LYS VAL ARG ARG ALA ILE GLU GLN LEU ALA SEQRES 12 A 146 ALA MET ASP SEQRES 1 B 12 ALA ARG TPO ALY GLN THR ALA ARG LYS SER THR GLY SEQRES 1 C 146 GLY SER HIS GLU MET GLY ALA PRO THR LEU PRO PRO ALA SEQRES 2 C 146 TRP GLN PRO PHE LEU LYS ASP HIS ARG ILE SER THR PHE SEQRES 3 C 146 LYS ASN TRP PRO PHE LEU GLU GLY CYS ALA CYS THR PRO SEQRES 4 C 146 GLU ARG MET ALA GLU ALA GLY PHE ILE HIS CYS PRO THR SEQRES 5 C 146 GLU ASN GLU PRO ASP LEU ALA GLN CYS PHE PHE CYS PHE SEQRES 6 C 146 LYS GLU LEU GLU GLY TRP GLU PRO ASP ASP ASP PRO ILE SEQRES 7 C 146 GLU GLU HIS LYS LYS HIS SER SER GLY CYS ALA PHE LEU SEQRES 8 C 146 SER VAL LYS LYS GLN PHE GLU GLU LEU THR LEU GLY GLU SEQRES 9 C 146 PHE LEU LYS LEU ASP ARG GLU ARG ALA LYS ASN LYS ILE SEQRES 10 C 146 ALA LYS GLU THR ASN ASN LYS LYS LYS GLU PHE GLU GLU SEQRES 11 C 146 THR ALA LYS LYS VAL ARG ARG ALA ILE GLU GLN LEU ALA SEQRES 12 C 146 ALA MET ASP SEQRES 1 D 12 ALA ARG TPO ALY GLN THR ALA ARG LYS SER THR GLY MODRES 7LBP TPO B 3 THR MODIFIED RESIDUE MODRES 7LBP ALY B 4 LYS MODIFIED RESIDUE MODRES 7LBP TPO D 3 THR MODIFIED RESIDUE MODRES 7LBP ALY D 4 LYS MODIFIED RESIDUE HET TPO B 3 11 HET ALY B 4 12 HET TPO D 3 11 HET ALY D 4 12 HET ZN A 201 1 HET ZN C 201 1 HETNAM TPO PHOSPHOTHREONINE HETNAM ALY N(6)-ACETYLLYSINE HETNAM ZN ZINC ION HETSYN TPO PHOSPHONOTHREONINE FORMUL 2 TPO 2(C4 H10 N O6 P) FORMUL 2 ALY 2(C8 H16 N2 O3) FORMUL 5 ZN 2(ZN 2+) FORMUL 7 HOH *5(H2 O) HELIX 1 AA1 TRP A 10 PHE A 13 5 4 HELIX 2 AA2 LEU A 14 THR A 21 1 8 HELIX 3 AA3 THR A 34 ALA A 41 1 8 HELIX 4 AA4 ASP A 72 SER A 81 1 10 HELIX 5 AA5 CYS A 84 VAL A 89 1 6 HELIX 6 AA6 GLN A 92 LEU A 96 5 5 HELIX 7 AA7 THR A 97 ALA A 140 1 44 HELIX 8 AA8 PRO C 7 PHE C 13 5 7 HELIX 9 AA9 LEU C 14 THR C 21 1 8 HELIX 10 AB1 THR C 34 ALA C 41 1 8 HELIX 11 AB2 ASP C 72 SER C 81 1 10 HELIX 12 AB3 CYS C 84 VAL C 89 5 6 HELIX 13 AB4 GLN C 92 LEU C 96 5 5 HELIX 14 AB5 THR C 97 ASP C 142 1 46 SHEET 1 AA1 4 PHE A 43 HIS A 45 0 SHEET 2 AA1 4 ALA A 55 CYS A 57 -1 O GLN A 56 N ILE A 44 SHEET 3 AA1 4 GLU A 63 GLU A 65 -1 O LEU A 64 N ALA A 55 SHEET 4 AA1 4 ARG B 2 TPO B 3 -1 O ARG B 2 N GLU A 65 SHEET 1 AA2 4 PHE C 43 HIS C 45 0 SHEET 2 AA2 4 ALA C 55 CYS C 57 -1 O GLN C 56 N ILE C 44 SHEET 3 AA2 4 GLU C 63 GLU C 65 -1 O LEU C 64 N ALA C 55 SHEET 4 AA2 4 ARG D 2 TPO D 3 -1 O ARG D 2 N GLU C 65 LINK C ARG B 2 N TPO B 3 1555 1555 1.33 LINK C TPO B 3 N ALY B 4 1555 1555 1.33 LINK C ALY B 4 N GLN B 5 1555 1555 1.33 LINK C ARG D 2 N TPO D 3 1555 1555 1.34 LINK C TPO D 3 N ALY D 4 1555 1555 1.33 LINK C ALY D 4 N GLN D 5 1555 1555 1.34 LINK SG CYS A 57 ZN ZN A 201 1555 1555 2.15 LINK SG CYS A 60 ZN ZN A 201 1555 1555 2.36 LINK NE2 HIS A 77 ZN ZN A 201 1555 1555 1.96 LINK SG CYS A 84 ZN ZN A 201 1555 1555 2.25 LINK SG CYS C 57 ZN ZN C 201 1555 1555 2.33 LINK SG CYS C 60 ZN ZN C 201 1555 1555 2.29 LINK NE2 HIS C 77 ZN ZN C 201 1555 1555 1.94 LINK SG CYS C 84 ZN ZN C 201 1555 1555 2.16 CRYST1 113.117 70.988 83.322 90.00 130.04 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008840 0.000000 0.007429 0.00000 SCALE2 0.000000 0.014087 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015677 0.00000