HEADER SIGNALING PROTEIN 17-JAN-21 7LFN TITLE STRUCTURE OF HYPERGLYCOSYLATED HUMAN IGG1 FC (FC267_329) COMPND MOL_ID: 1; COMPND 2 MOLECULE: IGG1 FC (FC267_329); COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DKFZP686C11235; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS EFFECTOR, IGG, ANTIBODY, FC, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.K.FIELDS,E.J.SUNDBERG REVDAT 2 18-OCT-23 7LFN 1 REMARK REVDAT 1 27-JAN-21 7LFN 0 JRNL AUTH J.K.FIELDS,E.J.SUNDBERG JRNL TITL SILENT ANTIBODIES: GENERATION OF HYPERGLYCOSYLATED FCS TO JRNL TITL 2 ABLATE EFFECTOR FUNCTIONS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 17443 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 860 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.7500 - 4.7200 0.99 2912 177 0.1870 0.2158 REMARK 3 2 4.7200 - 3.7500 0.98 2760 150 0.1980 0.2484 REMARK 3 3 3.7500 - 3.2800 0.95 2653 136 0.2773 0.3047 REMARK 3 4 3.2800 - 2.9800 0.99 2749 145 0.2790 0.3782 REMARK 3 5 2.9800 - 2.7600 1.00 2747 136 0.2964 0.3478 REMARK 3 6 2.7600 - 2.6000 0.99 2762 116 0.2966 0.3190 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.365 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.626 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 60.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3393 REMARK 3 ANGLE : 1.052 4637 REMARK 3 CHIRALITY : 0.054 596 REMARK 3 PLANARITY : 0.007 559 REMARK 3 DIHEDRAL : 16.139 1286 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 22.7222 1.7963 25.3451 REMARK 3 T TENSOR REMARK 3 T11: 0.3501 T22: 0.2165 REMARK 3 T33: 0.3192 T12: -0.0598 REMARK 3 T13: -0.0170 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 2.2370 L22: 1.5428 REMARK 3 L33: 1.0731 L12: -0.8675 REMARK 3 L13: 0.3863 L23: -0.9982 REMARK 3 S TENSOR REMARK 3 S11: 0.0234 S12: -0.1238 S13: -0.1362 REMARK 3 S21: -0.1931 S22: 0.0581 S23: -0.0418 REMARK 3 S31: 0.1513 S32: -0.0431 S33: -0.0703 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7LFN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1000254216. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033190 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17601 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 28.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5JII REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS GROWN BY MIXING 1 UL OF REMARK 280 FC267_329 (10 MG/ML IN 10MM HEPES, 75MM NACL PH 7.4) WITH 1 UL REMARK 280 OF PRECIPITANT SOLUTION CONSISTING OF 0.025M MES PH 7.0, 0.1M REMARK 280 KCL, 20.571% W/V PEG3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.74150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.66050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.62650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.66050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.74150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.62650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 215 REMARK 465 GLU A 216 REMARK 465 PRO A 217 REMARK 465 LYS A 218 REMARK 465 SER A 219 REMARK 465 CYS A 220 REMARK 465 ASP A 221 REMARK 465 LYS A 222 REMARK 465 THR A 223 REMARK 465 HIS A 224 REMARK 465 THR A 225 REMARK 465 CYS A 226 REMARK 465 PRO A 227 REMARK 465 PRO A 228 REMARK 465 CYS A 229 REMARK 465 PRO A 230 REMARK 465 ALA A 231 REMARK 465 PRO A 232 REMARK 465 GLU A 233 REMARK 465 LEU A 234 REMARK 465 LEU A 235 REMARK 465 GLY A 236 REMARK 465 SER A 444 REMARK 465 PRO A 445 REMARK 465 GLY A 446 REMARK 465 LYS A 447 REMARK 465 GLY B 215 REMARK 465 GLU B 216 REMARK 465 PRO B 217 REMARK 465 LYS B 218 REMARK 465 SER B 219 REMARK 465 CYS B 220 REMARK 465 ASP B 221 REMARK 465 LYS B 222 REMARK 465 THR B 223 REMARK 465 HIS B 224 REMARK 465 THR B 225 REMARK 465 CYS B 226 REMARK 465 PRO B 227 REMARK 465 PRO B 228 REMARK 465 CYS B 229 REMARK 465 PRO B 230 REMARK 465 ALA B 231 REMARK 465 PRO B 232 REMARK 465 GLU B 233 REMARK 465 LEU B 234 REMARK 465 LEU B 235 REMARK 465 GLY B 236 REMARK 465 GLY B 237 REMARK 465 PRO B 238 REMARK 465 SER B 239 REMARK 465 VAL B 264 REMARK 465 ASP B 265 REMARK 465 VAL B 266 REMARK 465 ASN B 267 REMARK 465 GLU B 272 REMARK 465 GLY B 281 REMARK 465 ASN B 325 REMARK 465 LYS B 326 REMARK 465 ALA B 327 REMARK 465 LEU B 328 REMARK 465 ASN B 329 REMARK 465 SER B 444 REMARK 465 PRO B 445 REMARK 465 GLY B 446 REMARK 465 LYS B 447 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 253 CG1 CG2 CD1 REMARK 470 SER A 268 OG REMARK 470 ASP A 270 CG OD1 OD2 REMARK 470 GLU A 272 CG CD OE1 OE2 REMARK 470 LYS A 288 CG CD CE NZ REMARK 470 GLU A 293 CG CD OE1 OE2 REMARK 470 LYS A 322 CG CD CE NZ REMARK 470 LYS A 326 CG CD CE NZ REMARK 470 LEU A 328 CG CD1 CD2 REMARK 470 LYS A 340 CG CD CE NZ REMARK 470 ARG A 355 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 361 CG OD1 ND2 REMARK 470 SER A 383 OG REMARK 470 ASN A 384 CG OD1 ND2 REMARK 470 GLN A 419 CG CD OE1 NE2 REMARK 470 VAL A 422 CG1 CG2 REMARK 470 LEU A 443 CG CD1 CD2 REMARK 470 VAL B 240 CG1 CG2 REMARK 470 LYS B 248 CG CD CE NZ REMARK 470 ILE B 253 CG1 CG2 CD1 REMARK 470 VAL B 259 CG1 CG2 REMARK 470 VAL B 263 CG1 CG2 REMARK 470 THR B 269 OG1 CG2 REMARK 470 ASP B 270 CG OD1 OD2 REMARK 470 LYS B 274 CG CD CE NZ REMARK 470 TYR B 278 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL B 279 CG1 CG2 REMARK 470 VAL B 282 CG1 CG2 REMARK 470 GLU B 283 CG CD OE1 OE2 REMARK 470 VAL B 284 CG1 CG2 REMARK 470 HIS B 285 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 288 CG CD CE NZ REMARK 470 LYS B 290 CG CD CE NZ REMARK 470 ARG B 292 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 293 CG CD OE1 OE2 REMARK 470 GLN B 295 CG CD OE1 NE2 REMARK 470 TYR B 296 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER B 298 OG REMARK 470 VAL B 302 CG1 CG2 REMARK 470 LYS B 317 CG CD CE NZ REMARK 470 LYS B 320 CG CD CE NZ REMARK 470 LYS B 322 CG CD CE NZ REMARK 470 VAL B 323 CG1 CG2 REMARK 470 ILE B 332 CG1 CG2 CD1 REMARK 470 GLU B 333 CG CD OE1 OE2 REMARK 470 LYS B 334 CG CD CE NZ REMARK 470 ARG B 344 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 355 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 363 CG1 CG2 REMARK 470 GLN B 386 CG CD OE1 NE2 REMARK 470 ASP B 413 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 270 76.18 45.49 REMARK 500 PRO A 374 -168.11 -68.61 REMARK 500 ASN A 390 65.96 -104.07 REMARK 500 GLN A 419 0.58 -68.61 REMARK 500 ASN A 434 26.96 49.27 REMARK 500 GLU B 258 119.22 -166.92 REMARK 500 ASP B 270 58.72 -164.02 REMARK 500 GLN B 295 -168.10 -128.66 REMARK 500 LYS B 334 138.03 -170.50 REMARK 500 GLN B 342 106.75 -35.31 REMARK 500 MET B 358 -9.96 -58.97 REMARK 500 ASN B 434 15.71 57.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 FUC A 501 REMARK 610 FUC B 501 DBREF 7LFN A 216 447 UNP Q6MZV7 Q6MZV7_HUMAN 242 473 DBREF 7LFN B 216 447 UNP Q6MZV7 Q6MZV7_HUMAN 242 473 SEQADV 7LFN GLY A 215 UNP Q6MZV7 EXPRESSION TAG SEQADV 7LFN ASN A 267 UNP Q6MZV7 SER 293 CONFLICT SEQADV 7LFN SER A 268 UNP Q6MZV7 HIS 294 CONFLICT SEQADV 7LFN THR A 269 UNP Q6MZV7 GLU 295 CONFLICT SEQADV 7LFN ASN A 329 UNP Q6MZV7 PRO 355 CONFLICT SEQADV 7LFN SER A 330 UNP Q6MZV7 ALA 356 CONFLICT SEQADV 7LFN THR A 331 UNP Q6MZV7 PRO 357 CONFLICT SEQADV 7LFN GLY B 215 UNP Q6MZV7 EXPRESSION TAG SEQADV 7LFN ASN B 267 UNP Q6MZV7 SER 293 CONFLICT SEQADV 7LFN SER B 268 UNP Q6MZV7 HIS 294 CONFLICT SEQADV 7LFN THR B 269 UNP Q6MZV7 GLU 295 CONFLICT SEQADV 7LFN ASN B 329 UNP Q6MZV7 PRO 355 CONFLICT SEQADV 7LFN SER B 330 UNP Q6MZV7 ALA 356 CONFLICT SEQADV 7LFN THR B 331 UNP Q6MZV7 PRO 357 CONFLICT SEQRES 1 A 233 GLY GLU PRO LYS SER CYS ASP LYS THR HIS THR CYS PRO SEQRES 2 A 233 PRO CYS PRO ALA PRO GLU LEU LEU GLY GLY PRO SER VAL SEQRES 3 A 233 PHE LEU PHE PRO PRO LYS PRO LYS ASP THR LEU MET ILE SEQRES 4 A 233 SER ARG THR PRO GLU VAL THR CYS VAL VAL VAL ASP VAL SEQRES 5 A 233 ASN SER THR ASP PRO GLU VAL LYS PHE ASN TRP TYR VAL SEQRES 6 A 233 ASP GLY VAL GLU VAL HIS ASN ALA LYS THR LYS PRO ARG SEQRES 7 A 233 GLU GLU GLN TYR ASN SER THR TYR ARG VAL VAL SER VAL SEQRES 8 A 233 LEU THR VAL LEU HIS GLN ASP TRP LEU ASN GLY LYS GLU SEQRES 9 A 233 TYR LYS CYS LYS VAL SER ASN LYS ALA LEU ASN SER THR SEQRES 10 A 233 ILE GLU LYS THR ILE SER LYS ALA LYS GLY GLN PRO ARG SEQRES 11 A 233 GLU PRO GLN VAL TYR THR LEU PRO PRO SER ARG GLU GLU SEQRES 12 A 233 MET THR LYS ASN GLN VAL SER LEU THR CYS LEU VAL LYS SEQRES 13 A 233 GLY PHE TYR PRO SER ASP ILE ALA VAL GLU TRP GLU SER SEQRES 14 A 233 ASN GLY GLN PRO GLU ASN ASN TYR LYS THR THR PRO PRO SEQRES 15 A 233 VAL LEU ASP SER ASP GLY SER PHE PHE LEU TYR SER LYS SEQRES 16 A 233 LEU THR VAL ASP LYS SER ARG TRP GLN GLN GLY ASN VAL SEQRES 17 A 233 PHE SER CYS SER VAL MET HIS GLU ALA LEU HIS ASN HIS SEQRES 18 A 233 TYR THR GLN LYS SER LEU SER LEU SER PRO GLY LYS SEQRES 1 B 233 GLY GLU PRO LYS SER CYS ASP LYS THR HIS THR CYS PRO SEQRES 2 B 233 PRO CYS PRO ALA PRO GLU LEU LEU GLY GLY PRO SER VAL SEQRES 3 B 233 PHE LEU PHE PRO PRO LYS PRO LYS ASP THR LEU MET ILE SEQRES 4 B 233 SER ARG THR PRO GLU VAL THR CYS VAL VAL VAL ASP VAL SEQRES 5 B 233 ASN SER THR ASP PRO GLU VAL LYS PHE ASN TRP TYR VAL SEQRES 6 B 233 ASP GLY VAL GLU VAL HIS ASN ALA LYS THR LYS PRO ARG SEQRES 7 B 233 GLU GLU GLN TYR ASN SER THR TYR ARG VAL VAL SER VAL SEQRES 8 B 233 LEU THR VAL LEU HIS GLN ASP TRP LEU ASN GLY LYS GLU SEQRES 9 B 233 TYR LYS CYS LYS VAL SER ASN LYS ALA LEU ASN SER THR SEQRES 10 B 233 ILE GLU LYS THR ILE SER LYS ALA LYS GLY GLN PRO ARG SEQRES 11 B 233 GLU PRO GLN VAL TYR THR LEU PRO PRO SER ARG GLU GLU SEQRES 12 B 233 MET THR LYS ASN GLN VAL SER LEU THR CYS LEU VAL LYS SEQRES 13 B 233 GLY PHE TYR PRO SER ASP ILE ALA VAL GLU TRP GLU SER SEQRES 14 B 233 ASN GLY GLN PRO GLU ASN ASN TYR LYS THR THR PRO PRO SEQRES 15 B 233 VAL LEU ASP SER ASP GLY SER PHE PHE LEU TYR SER LYS SEQRES 16 B 233 LEU THR VAL ASP LYS SER ARG TRP GLN GLN GLY ASN VAL SEQRES 17 B 233 PHE SER CYS SER VAL MET HIS GLU ALA LEU HIS ASN HIS SEQRES 18 B 233 TYR THR GLN LYS SER LEU SER LEU SER PRO GLY LYS HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET MAN C 5 11 HET FUC C 6 10 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET NAG D 5 14 HET GAL D 6 11 HET MAN D 7 11 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET NAG E 5 14 HET GAL E 6 11 HET MAN E 7 11 HET FUC A 501 10 HET NAG A 502 14 HET FUC B 501 10 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE FORMUL 3 NAG 9(C8 H15 N O6) FORMUL 3 BMA 3(C6 H12 O6) FORMUL 3 MAN 6(C6 H12 O6) FORMUL 3 FUC 3(C6 H12 O5) FORMUL 4 GAL 2(C6 H12 O6) HELIX 1 AA1 LYS A 246 LEU A 251 1 6 HELIX 2 AA2 LEU A 309 ASN A 315 1 7 HELIX 3 AA3 ARG A 355 LYS A 360 5 6 HELIX 4 AA4 LYS A 414 GLN A 419 1 6 HELIX 5 AA5 LEU A 432 TYR A 436 5 5 HELIX 6 AA6 LYS B 246 MET B 252 1 7 HELIX 7 AA7 LEU B 309 ASN B 315 1 7 HELIX 8 AA8 GLU B 356 LYS B 360 5 5 HELIX 9 AA9 LYS B 414 GLN B 419 1 6 HELIX 10 AB1 LEU B 432 TYR B 436 5 5 SHEET 1 AA1 4 SER A 239 PHE A 243 0 SHEET 2 AA1 4 GLU A 258 ASN A 267 -1 O VAL A 262 N PHE A 241 SHEET 3 AA1 4 THR A 299 THR A 307 -1 O VAL A 302 N VAL A 263 SHEET 4 AA1 4 LYS A 288 THR A 289 -1 N LYS A 288 O VAL A 305 SHEET 1 AA2 4 SER A 239 PHE A 243 0 SHEET 2 AA2 4 GLU A 258 ASN A 267 -1 O VAL A 262 N PHE A 241 SHEET 3 AA2 4 THR A 299 THR A 307 -1 O VAL A 302 N VAL A 263 SHEET 4 AA2 4 GLU A 293 GLU A 294 -1 N GLU A 293 O ARG A 301 SHEET 1 AA3 4 VAL A 282 VAL A 284 0 SHEET 2 AA3 4 VAL A 273 VAL A 279 -1 N VAL A 279 O VAL A 282 SHEET 3 AA3 4 TYR A 319 ASN A 325 -1 O LYS A 322 N ASN A 276 SHEET 4 AA3 4 THR A 331 ILE A 336 -1 O ILE A 332 N VAL A 323 SHEET 1 AA4 4 GLN A 347 LEU A 351 0 SHEET 2 AA4 4 GLN A 362 PHE A 372 -1 O LYS A 370 N GLN A 347 SHEET 3 AA4 4 PHE A 404 ASP A 413 -1 O LEU A 410 N LEU A 365 SHEET 4 AA4 4 TYR A 391 THR A 393 -1 N LYS A 392 O LYS A 409 SHEET 1 AA5 4 GLN A 347 LEU A 351 0 SHEET 2 AA5 4 GLN A 362 PHE A 372 -1 O LYS A 370 N GLN A 347 SHEET 3 AA5 4 PHE A 404 ASP A 413 -1 O LEU A 410 N LEU A 365 SHEET 4 AA5 4 VAL A 397 LEU A 398 -1 N VAL A 397 O PHE A 405 SHEET 1 AA6 4 GLN A 386 PRO A 387 0 SHEET 2 AA6 4 ALA A 378 SER A 383 -1 N SER A 383 O GLN A 386 SHEET 3 AA6 4 PHE A 423 MET A 428 -1 O SER A 426 N GLU A 380 SHEET 4 AA6 4 THR A 437 LEU A 441 -1 O LYS A 439 N CYS A 425 SHEET 1 AA7 4 PHE B 241 PHE B 243 0 SHEET 2 AA7 4 GLU B 258 VAL B 262 -1 O VAL B 262 N PHE B 241 SHEET 3 AA7 4 VAL B 303 THR B 307 -1 O SER B 304 N CYS B 261 SHEET 4 AA7 4 LYS B 288 THR B 289 -1 N LYS B 288 O VAL B 305 SHEET 1 AA8 4 GLU B 283 VAL B 284 0 SHEET 2 AA8 4 LYS B 274 TYR B 278 -1 N TRP B 277 O VAL B 284 SHEET 3 AA8 4 TYR B 319 SER B 324 -1 O LYS B 322 N ASN B 276 SHEET 4 AA8 4 ILE B 332 ILE B 336 -1 O ILE B 336 N TYR B 319 SHEET 1 AA9 2 GLU B 293 GLU B 294 0 SHEET 2 AA9 2 TYR B 300 ARG B 301 -1 O ARG B 301 N GLU B 293 SHEET 1 AB1 4 GLN B 347 LEU B 351 0 SHEET 2 AB1 4 GLN B 362 PHE B 372 -1 O LYS B 370 N GLN B 347 SHEET 3 AB1 4 PHE B 404 ASP B 413 -1 O SER B 408 N CYS B 367 SHEET 4 AB1 4 TYR B 391 THR B 393 -1 N LYS B 392 O LYS B 409 SHEET 1 AB2 4 GLN B 347 LEU B 351 0 SHEET 2 AB2 4 GLN B 362 PHE B 372 -1 O LYS B 370 N GLN B 347 SHEET 3 AB2 4 PHE B 404 ASP B 413 -1 O SER B 408 N CYS B 367 SHEET 4 AB2 4 VAL B 397 LEU B 398 -1 N VAL B 397 O PHE B 405 SHEET 1 AB3 4 GLN B 386 PRO B 387 0 SHEET 2 AB3 4 ALA B 378 SER B 383 -1 N SER B 383 O GLN B 386 SHEET 3 AB3 4 PHE B 423 MET B 428 -1 O SER B 426 N GLU B 380 SHEET 4 AB3 4 THR B 437 LEU B 441 -1 O LEU B 441 N PHE B 423 SSBOND 1 CYS A 261 CYS A 321 1555 1555 2.03 SSBOND 2 CYS A 367 CYS A 425 1555 1555 2.05 SSBOND 3 CYS B 261 CYS B 321 1555 1555 2.04 SSBOND 4 CYS B 367 CYS B 425 1555 1555 2.04 LINK ND2 ASN A 267 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 297 C1 NAG D 1 1555 1555 1.45 LINK ND2 ASN A 329 C1 NAG A 502 1555 1555 1.45 LINK ND2 ASN B 297 C1 NAG E 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 LINK O6 NAG C 1 C1 FUC C 6 1555 1555 1.43 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.45 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.45 LINK O6 BMA C 3 C1 MAN C 5 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.44 LINK O6 BMA D 3 C1 MAN D 4 1555 1555 1.43 LINK O3 BMA D 3 C1 MAN D 7 1555 1555 1.45 LINK O2 MAN D 4 C1 NAG D 5 1555 1555 1.44 LINK O4 NAG D 5 C1 GAL D 6 1555 1555 1.43 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.46 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.45 LINK O6 BMA E 3 C1 MAN E 4 1555 1555 1.45 LINK O3 BMA E 3 C1 MAN E 7 1555 1555 1.44 LINK O2 MAN E 4 C1 NAG E 5 1555 1555 1.44 LINK O4 NAG E 5 C1 GAL E 6 1555 1555 1.45 CISPEP 1 TYR A 373 PRO A 374 0 -12.41 CISPEP 2 TYR B 373 PRO B 374 0 -7.83 CRYST1 49.483 79.253 141.321 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020209 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012618 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007076 0.00000