HEADER VIRUS LIKE PARTICLE 27-JAN-21 7LII TITLE THERMOTOGA MARITIMA ENCAPSULIN NANOCOMPARTMENT PORE MUTANT S7D COMPND MOL_ID: 1; COMPND 2 MOLECULE: MARITIMACIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: THERMOTOGA BACTERIOCIN, ENCAPSULIN NANOCOMPARTMENT PORE; COMPND 5 EC: 3.4.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA (STRAIN ATCC 43589 / MSB8 / SOURCE 3 DSM 3109 / JCM 10099); SOURCE 4 ORGANISM_TAXID: 243274; SOURCE 5 STRAIN: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099; SOURCE 6 GENE: TM_0785; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ENCAPSULIN, NANOCOMPARTMENT, VIRUS LIKE PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR M.P.ANDREAS,L.ADAMSON,N.TASNEEM,W.CLOSE,T.GIESSEN,Y.H.LAU REVDAT 2 16-FEB-22 7LII 1 JRNL REVDAT 1 09-FEB-22 7LII 0 JRNL AUTH L.S.R.ADAMSON,N.TASNEEM,M.P.ANDREAS,W.CLOSE,E.N.JENNER, JRNL AUTH 2 T.N.SZYSZKA,R.YOUNG,L.C.CHEAH,A.NORMAN, JRNL AUTH 3 H.I.MACDERMOTT-OPESKIN,M.L.O'MARA,F.SAINSBURY,T.W.GIESSEN, JRNL AUTH 4 Y.H.LAU JRNL TITL PORE STRUCTURE CONTROLS STABILITY AND MOLECULAR FLUX IN JRNL TITL 2 ENGINEERED PROTEIN CAGES. JRNL REF SCI ADV V. 8 L7346 2022 JRNL REFN ESSN 2375-2548 JRNL PMID 35119930 JRNL DOI 10.1126/SCIADV.ABL7346 REMARK 2 REMARK 2 RESOLUTION. 3.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : LEGINON, CRYOSPARC, UCSF CHIMERA, COOT, REMARK 3 CRYOSPARC, CRYOSPARC, CRYOSPARC, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 3DKT REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : 41.410 REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.550 REMARK 3 NUMBER OF PARTICLES : 21501 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7LII COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1000254399. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : THERMOTOGA MARATIMA PORE MUTANT REMARK 245 S7D REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 2.00 REMARK 245 SAMPLE SUPPORT DETAILS : 1 MINUTE AT 5 MA REMARK 245 SAMPLE VITRIFICATION DETAILS : BLOT 4 SECONDS, FORCE 20 REMARK 245 IMMEDIATELY PRIOR TO PLUNGING REMARK 245 INTO ETHANE REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : THERMOTOGA MARATIMA ENCAPSULIN REMARK 245 PORE MUTANT WITH K182D, E182D, AND 184-190 DELETION REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS GLACIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : -1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : -1800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6900.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 45000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.809022 0.499992 0.309018 -116.28872 REMARK 350 BIOMT2 2 -0.499996 0.309017 0.809019 71.86974 REMARK 350 BIOMT3 2 0.309011 -0.809022 0.499995 188.16265 REMARK 350 BIOMT1 3 0.500012 0.309008 0.809013 -116.28885 REMARK 350 BIOMT2 3 -0.309019 -0.809017 0.499999 304.44985 REMARK 350 BIOMT3 3 0.809009 -0.500006 -0.309029 188.16438 REMARK 350 BIOMT1 4 0.500012 -0.309019 0.809009 -0.00021 REMARK 350 BIOMT2 4 0.309008 -0.809017 -0.500006 376.32252 REMARK 350 BIOMT3 4 0.809013 0.499999 -0.309029 0.00280 REMARK 350 BIOMT1 5 0.809022 -0.499996 0.309011 71.87025 REMARK 350 BIOMT2 5 0.499992 0.309017 -0.809022 188.16217 REMARK 350 BIOMT3 5 0.309018 0.809019 0.499995 -116.28918 REMARK 350 BIOMT1 6 0.309032 0.809016 0.499992 -116.29056 REMARK 350 BIOMT2 6 0.809016 -0.500007 0.309008 71.87454 REMARK 350 BIOMT3 6 0.499992 0.309008 -0.809025 188.16370 REMARK 350 BIOMT1 7 0.000012 0.000008 1.000000 -0.00384 REMARK 350 BIOMT2 7 1.000000 -0.000004 -0.000012 0.00356 REMARK 350 BIOMT3 7 0.000004 1.000000 -0.000008 0.00028 REMARK 350 BIOMT1 8 0.309017 -0.809013 0.500006 188.15801 REMARK 350 BIOMT2 8 0.809020 0.500001 0.309009 -116.28769 REMARK 350 BIOMT3 8 -0.499996 0.309026 0.809016 71.86801 REMARK 350 BIOMT1 9 0.809012 -0.500009 -0.309015 188.16172 REMARK 350 BIOMT2 9 0.500003 0.309017 0.809015 -116.28866 REMARK 350 BIOMT3 9 -0.309024 -0.809012 0.500005 304.44812 REMARK 350 BIOMT1 10 0.809022 0.499988 -0.309023 0.00216 REMARK 350 BIOMT2 10 0.500001 -0.309022 0.809015 0.00200 REMARK 350 BIOMT3 10 0.309003 -0.809022 -0.500000 376.32281 REMARK 350 BIOMT1 11 -0.809017 -0.500000 0.309016 376.31930 REMARK 350 BIOMT2 11 -0.500000 0.309020 -0.809016 376.31838 REMARK 350 BIOMT3 11 0.309016 -0.809016 -0.500003 376.31961 REMARK 350 BIOMT1 12 -0.309025 -0.809011 -0.500004 492.60927 REMARK 350 BIOMT2 12 -0.809015 0.500008 -0.309010 304.44539 REMARK 350 BIOMT3 12 0.499999 0.309019 -0.809017 188.15897 REMARK 350 BIOMT1 13 -0.000012 0.000006 -1.000000 376.31980 REMARK 350 BIOMT2 13 -1.000000 0.000006 0.000012 376.31592 REMARK 350 BIOMT3 13 0.000006 1.000000 0.000006 -0.00291 REMARK 350 BIOMT1 14 -0.309024 0.809018 -0.499994 188.15900 REMARK 350 BIOMT2 14 -0.809021 -0.500000 -0.309007 492.60735 REMARK 350 BIOMT3 14 -0.499989 0.309015 0.809024 71.86729 REMARK 350 BIOMT1 15 -0.809017 0.499997 0.309022 188.15869 REMARK 350 BIOMT2 15 -0.500004 -0.309019 -0.809014 492.60886 REMARK 350 BIOMT3 15 -0.309011 -0.809018 0.500002 304.44740 REMARK 350 BIOMT1 16 -0.500015 -0.309016 -0.809008 492.60867 REMARK 350 BIOMT2 16 -0.309016 -0.809013 0.500007 304.44694 REMARK 350 BIOMT3 16 -0.809008 0.500007 0.309028 188.15400 REMARK 350 BIOMT1 17 -0.500009 0.309011 -0.809014 376.32072 REMARK 350 BIOMT2 17 0.309011 -0.809021 -0.499997 376.32117 REMARK 350 BIOMT3 17 -0.809014 -0.499997 0.309030 376.31540 REMARK 350 BIOMT1 18 -0.809017 0.499999 -0.309019 304.44846 REMARK 350 BIOMT2 18 0.499999 0.309010 -0.809020 188.16178 REMARK 350 BIOMT3 18 -0.309019 -0.809020 -0.499994 492.60783 REMARK 350 BIOMT1 19 -1.000000 0.000010 0.000000 376.31691 REMARK 350 BIOMT2 19 0.000010 1.000000 -0.000002 -0.00135 REMARK 350 BIOMT3 19 0.000000 -0.000002 -1.000000 376.31910 REMARK 350 BIOMT1 20 -0.809026 -0.499989 -0.309010 492.60632 REMARK 350 BIOMT2 20 -0.499989 0.309024 0.809021 71.86683 REMARK 350 BIOMT3 20 -0.309010 0.809021 -0.499997 188.15628 REMARK 350 BIOMT1 21 0.809012 -0.500011 0.309012 71.87470 REMARK 350 BIOMT2 21 -0.500000 -0.309012 0.809019 188.15887 REMARK 350 BIOMT3 21 -0.309030 -0.809012 -0.500000 492.60953 REMARK 350 BIOMT1 22 1.000000 -0.000010 -0.000015 0.00455 REMARK 350 BIOMT2 22 -0.000010 -1.000000 0.000000 376.32173 REMARK 350 BIOMT3 22 -0.000015 0.000000 -1.000000 376.32140 REMARK 350 BIOMT1 23 0.809022 0.500001 0.309003 -116.28761 REMARK 350 BIOMT2 23 0.499988 -0.309022 -0.809022 304.45310 REMARK 350 BIOMT3 23 -0.309023 0.809015 -0.500000 188.16045 REMARK 350 BIOMT1 24 0.500003 0.309023 0.809013 -116.28996 REMARK 350 BIOMT2 24 0.309014 0.809014 -0.500007 71.87299 REMARK 350 BIOMT3 24 -0.809016 0.500001 0.309017 188.15872 REMARK 350 BIOMT1 25 0.499997 -0.309018 0.809018 0.00074 REMARK 350 BIOMT2 25 -0.309013 0.809020 0.499998 -0.00079 REMARK 350 BIOMT3 25 -0.809020 -0.499994 0.309017 376.31860 REMARK 350 BIOMT1 26 -0.000003 1.000000 -0.000006 0.00099 REMARK 350 BIOMT2 26 -0.000008 -0.000006 -1.000000 376.32201 REMARK 350 BIOMT3 26 -1.000000 -0.000003 0.000008 376.31756 REMARK 350 BIOMT1 27 -0.500000 0.309021 0.809016 71.86990 REMARK 350 BIOMT2 27 -0.309015 0.809016 -0.500003 188.15992 REMARK 350 BIOMT3 27 -0.809018 -0.500000 -0.309016 492.60770 REMARK 350 BIOMT1 28 -0.309025 -0.809015 0.499999 304.45001 REMARK 350 BIOMT2 28 -0.809011 0.500008 0.309019 188.15680 REMARK 350 BIOMT3 28 -0.500004 -0.309010 -0.809017 492.60724 REMARK 350 BIOMT1 29 0.309002 -0.809019 -0.500006 376.32351 REMARK 350 BIOMT2 29 -0.809019 -0.499992 0.309025 376.31696 REMARK 350 BIOMT3 29 -0.500006 0.309025 -0.809010 376.31682 REMARK 350 BIOMT1 30 0.499988 0.309013 -0.809026 188.16367 REMARK 350 BIOMT2 30 -0.309028 -0.809017 -0.499993 492.60946 REMARK 350 BIOMT3 30 -0.809020 0.500002 -0.309005 304.44584 REMARK 350 BIOMT1 31 -0.309010 -0.809015 0.500008 304.44556 REMARK 350 BIOMT2 31 0.809014 -0.500000 -0.309024 188.16202 REMARK 350 BIOMT3 31 0.500009 0.309022 0.809010 -116.29029 REMARK 350 BIOMT1 32 0.309017 -0.809019 -0.499997 376.31896 REMARK 350 BIOMT2 32 0.809016 0.499999 -0.309020 0.00117 REMARK 350 BIOMT3 32 0.500001 -0.309013 0.809018 -0.00092 REMARK 350 BIOMT1 33 0.500003 0.309014 -0.809016 188.15906 REMARK 350 BIOMT2 33 0.309023 0.809014 0.500001 -116.28953 REMARK 350 BIOMT3 33 0.809013 -0.500007 0.309017 71.87281 REMARK 350 BIOMT1 34 0.000012 1.000000 0.000004 -0.00356 REMARK 350 BIOMT2 34 0.000008 -0.000004 1.000000 -0.00028 REMARK 350 BIOMT3 34 1.000000 -0.000012 -0.000008 0.00384 REMARK 350 BIOMT1 35 -0.499985 0.309020 0.809025 71.86545 REMARK 350 BIOMT2 35 0.309020 -0.809019 0.499995 188.16112 REMARK 350 BIOMT3 35 0.809025 0.499995 0.309004 -116.28734 REMARK 350 BIOMT1 36 -0.500000 0.309026 -0.809014 376.31617 REMARK 350 BIOMT2 36 -0.309006 0.809018 0.500005 -0.00304 REMARK 350 BIOMT3 36 0.809021 0.499993 -0.309018 0.00050 REMARK 350 BIOMT1 37 -0.809017 0.500008 -0.309004 304.44401 REMARK 350 BIOMT2 37 -0.499991 -0.309015 0.809023 188.15704 REMARK 350 BIOMT3 37 0.309031 0.809013 0.499998 -116.29088 REMARK 350 BIOMT1 38 -1.000000 0.000000 0.000015 376.31596 REMARK 350 BIOMT2 38 0.000000 -1.000000 0.000002 376.31949 REMARK 350 BIOMT3 38 0.000015 0.000002 1.000000 -0.00319 REMARK 350 BIOMT1 39 -0.809017 -0.500004 -0.309011 492.60743 REMARK 350 BIOMT2 39 0.499997 -0.309019 -0.809018 304.45019 REMARK 350 BIOMT3 39 0.309022 -0.809014 0.500002 188.15792 REMARK 350 BIOMT1 40 -0.500000 -0.309015 -0.809018 492.60756 REMARK 350 BIOMT2 40 0.309021 0.809016 -0.500000 71.87008 REMARK 350 BIOMT3 40 0.809016 -0.500003 -0.309016 188.16021 REMARK 350 BIOMT1 41 0.809012 -0.500000 -0.309030 188.16293 REMARK 350 BIOMT2 41 -0.500011 -0.309012 -0.809012 492.60859 REMARK 350 BIOMT3 41 0.309012 0.809019 -0.500000 71.87053 REMARK 350 BIOMT1 42 0.809012 0.500003 -0.309024 0.00120 REMARK 350 BIOMT2 42 -0.500009 0.309017 -0.809012 376.31973 REMARK 350 BIOMT3 42 -0.309015 0.809015 0.500005 -0.00140 REMARK 350 BIOMT1 43 0.309017 0.809016 0.500001 -116.28944 REMARK 350 BIOMT2 43 -0.809019 0.499999 -0.309013 304.44830 REMARK 350 BIOMT3 43 -0.499997 -0.309020 0.809018 188.15941 REMARK 350 BIOMT1 44 0.000003 -0.000006 1.000000 0.00071 REMARK 350 BIOMT2 44 -1.000000 0.000004 0.000003 376.31817 REMARK 350 BIOMT3 44 -0.000004 -1.000000 -0.000006 376.32112 REMARK 350 BIOMT1 45 0.309017 -0.809023 0.499991 188.16262 REMARK 350 BIOMT2 45 -0.809023 -0.499993 -0.309014 492.60762 REMARK 350 BIOMT3 45 0.499991 -0.309014 -0.809024 304.45065 REMARK 350 BIOMT1 46 -0.309010 0.809014 0.500009 -0.00300 REMARK 350 BIOMT2 46 -0.809015 -0.500000 0.309022 376.31832 REMARK 350 BIOMT3 46 0.500008 -0.309024 0.809010 0.00139 REMARK 350 BIOMT1 47 -0.499991 -0.309021 0.809021 188.15795 REMARK 350 BIOMT2 47 -0.309021 -0.809015 -0.500000 492.60918 REMARK 350 BIOMT3 47 0.809021 -0.500000 0.309006 71.87209 REMARK 350 BIOMT1 48 0.000003 -1.000000 -0.000004 376.31952 REMARK 350 BIOMT2 48 -0.000006 0.000004 -1.000000 376.31977 REMARK 350 BIOMT3 48 1.000000 0.000003 -0.000006 0.00065 REMARK 350 BIOMT1 49 0.499997 -0.309013 -0.809020 304.44881 REMARK 350 BIOMT2 49 -0.309018 0.809020 -0.499994 188.15809 REMARK 350 BIOMT3 49 0.809018 0.499998 0.309017 -116.28904 REMARK 350 BIOMT1 50 0.309017 0.809020 -0.499996 71.86870 REMARK 350 BIOMT2 50 -0.809013 0.500001 0.309026 188.15719 REMARK 350 BIOMT3 50 0.500006 0.309009 0.809016 -116.28859 REMARK 350 BIOMT1 51 -0.500000 -0.309006 0.809021 188.15674 REMARK 350 BIOMT2 51 0.309026 0.809018 0.499993 -116.28925 REMARK 350 BIOMT3 51 -0.809014 0.500005 -0.309018 304.44656 REMARK 350 BIOMT1 52 -0.000012 -1.000000 0.000006 376.32047 REMARK 350 BIOMT2 52 0.000006 0.000006 1.000000 -0.00163 REMARK 350 BIOMT3 52 -1.000000 0.000012 0.000006 376.31525 REMARK 350 BIOMT1 53 0.499988 -0.309028 -0.809020 304.45326 REMARK 350 BIOMT2 53 0.309013 -0.809017 0.500002 188.16073 REMARK 350 BIOMT3 53 -0.809026 -0.499993 -0.309005 492.60600 REMARK 350 BIOMT1 54 0.309017 0.809010 -0.500011 71.87315 REMARK 350 BIOMT2 54 0.809010 -0.500008 -0.309021 188.16385 REMARK 350 BIOMT3 54 -0.500011 -0.309021 -0.809009 492.60894 REMARK 350 BIOMT1 55 -0.309009 0.809024 0.499994 -0.00205 REMARK 350 BIOMT2 55 0.809018 0.499992 -0.309027 0.00341 REMARK 350 BIOMT3 55 -0.500003 0.309012 -0.809017 376.32001 REMARK 350 BIOMT1 56 -0.000003 -0.000008 -1.000000 376.32075 REMARK 350 BIOMT2 56 1.000000 -0.000006 -0.000003 0.00221 REMARK 350 BIOMT3 56 -0.000006 -1.000000 0.000008 376.31882 REMARK 350 BIOMT1 57 -0.309009 0.809018 -0.500003 188.15779 REMARK 350 BIOMT2 57 0.809024 0.499992 0.309012 -116.28742 REMARK 350 BIOMT3 57 0.499994 -0.309027 -0.809017 304.45137 REMARK 350 BIOMT1 58 -0.809008 0.500012 0.309023 188.15408 REMARK 350 BIOMT2 58 0.500012 0.309014 0.809011 -116.28893 REMARK 350 BIOMT3 58 0.309023 0.809011 -0.500006 71.87125 REMARK 350 BIOMT1 59 -0.809017 -0.499991 0.309031 376.31476 REMARK 350 BIOMT2 59 0.500008 -0.309015 0.809013 -0.00025 REMARK 350 BIOMT3 59 -0.309004 0.809023 0.499998 -0.00371 REMARK 350 BIOMT1 60 -0.309024 -0.809021 -0.499989 492.60815 REMARK 350 BIOMT2 60 0.809018 -0.500000 0.309015 71.87163 REMARK 350 BIOMT3 60 -0.499994 -0.309007 0.809024 188.15523 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 91 -7.85 -55.30 REMARK 500 ASN A 98 66.32 -102.24 REMARK 500 ARG A 137 77.08 -102.41 REMARK 500 PRO A 145 -6.91 -55.95 REMARK 500 GLU A 184 -30.31 -130.26 REMARK 500 GLU A 210 31.70 -142.62 REMARK 500 GLU A 231 -72.70 -77.74 REMARK 500 LYS A 232 -47.56 -134.65 REMARK 500 VAL A 248 -62.98 -91.46 REMARK 500 ALA A 252 57.07 -93.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RBF A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-23379 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-23380 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-23381 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-23382 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-23383 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-23384 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-23385 RELATED DB: EMDB DBREF 7LII A 1 258 UNP Q9WZP2 MARIT_THEMA 1 265 SEQADV 7LII ASP A 182 UNP Q9WZP2 LYS 182 ENGINEERED MUTATION SEQADV 7LII ASP A 183 UNP Q9WZP2 GLU 183 ENGINEERED MUTATION SEQADV 7LII A UNP Q9WZP2 GLU 184 DELETION SEQADV 7LII A UNP Q9WZP2 ALA 185 DELETION SEQADV 7LII A UNP Q9WZP2 GLY 186 DELETION SEQADV 7LII A UNP Q9WZP2 HIS 187 DELETION SEQADV 7LII A UNP Q9WZP2 TYR 188 DELETION SEQADV 7LII A UNP Q9WZP2 PRO 189 DELETION SEQADV 7LII A UNP Q9WZP2 LEU 190 DELETION SEQRES 1 A 258 MET GLU PHE LEU LYS ARG SER PHE ALA PRO LEU THR GLU SEQRES 2 A 258 LYS GLN TRP GLN GLU ILE ASP ASN ARG ALA ARG GLU ILE SEQRES 3 A 258 PHE LYS THR GLN LEU TYR GLY ARG LYS PHE VAL ASP VAL SEQRES 4 A 258 GLU GLY PRO TYR GLY TRP GLU TYR ALA ALA HIS PRO LEU SEQRES 5 A 258 GLY GLU VAL GLU VAL LEU SER ASP GLU ASN GLU VAL VAL SEQRES 6 A 258 LYS TRP GLY LEU ARG LYS SER LEU PRO LEU ILE GLU LEU SEQRES 7 A 258 ARG ALA THR PHE THR LEU ASP LEU TRP GLU LEU ASP ASN SEQRES 8 A 258 LEU GLU ARG GLY LYS PRO ASN VAL ASP LEU SER SER LEU SEQRES 9 A 258 GLU GLU THR VAL ARG LYS VAL ALA GLU PHE GLU ASP GLU SEQRES 10 A 258 VAL ILE PHE ARG GLY CYS GLU LYS SER GLY VAL LYS GLY SEQRES 11 A 258 LEU LEU SER PHE GLU GLU ARG LYS ILE GLU CYS GLY SER SEQRES 12 A 258 THR PRO LYS ASP LEU LEU GLU ALA ILE VAL ARG ALA LEU SEQRES 13 A 258 SER ILE PHE SER LYS ASP GLY ILE GLU GLY PRO TYR THR SEQRES 14 A 258 LEU VAL ILE ASN THR ASP ARG TRP ILE ASN PHE LEU ASP SEQRES 15 A 258 ASP GLU LYS ARG VAL GLU GLU CYS LEU ARG GLY GLY LYS SEQRES 16 A 258 ILE ILE THR THR PRO ARG ILE GLU ASP ALA LEU VAL VAL SEQRES 17 A 258 SER GLU ARG GLY GLY ASP PHE LYS LEU ILE LEU GLY GLN SEQRES 18 A 258 ASP LEU SER ILE GLY TYR GLU ASP ARG GLU LYS ASP ALA SEQRES 19 A 258 VAL ARG LEU PHE ILE THR GLU THR PHE THR PHE GLN VAL SEQRES 20 A 258 VAL ASN PRO GLU ALA LEU ILE LEU LEU LYS PHE HET RBF A 301 27 HETNAM RBF RIBOFLAVIN HETSYN RBF RIBOFLAVINE; VITAMIN B2 FORMUL 2 RBF C17 H20 N4 O6 HELIX 1 AA1 THR A 12 LEU A 31 1 20 HELIX 2 AA2 TYR A 32 PHE A 36 5 5 HELIX 3 AA3 LEU A 86 GLY A 95 1 10 HELIX 4 AA4 SER A 103 GLY A 122 1 20 HELIX 5 AA5 LYS A 146 ASP A 162 1 17 HELIX 6 AA6 ASP A 175 ASN A 179 5 5 HELIX 7 AA7 GLU A 184 LEU A 191 1 8 SHEET 1 AA1 4 ASP A 38 GLU A 40 0 SHEET 2 AA1 4 PHE A 215 ARG A 230 1 O LEU A 217 N GLU A 40 SHEET 3 AA1 4 ALA A 234 VAL A 247 -1 O THR A 242 N GLY A 220 SHEET 4 AA1 4 ILE A 76 ASP A 85 -1 N LEU A 84 O VAL A 235 SHEET 1 AA2 2 HIS A 50 VAL A 57 0 SHEET 2 AA2 2 GLY A 68 LEU A 73 -1 O LEU A 73 N HIS A 50 SHEET 1 AA3 5 LYS A 138 GLU A 140 0 SHEET 2 AA3 5 LEU A 253 LYS A 257 1 O LEU A 255 N ILE A 139 SHEET 3 AA3 5 ALA A 205 SER A 209 -1 N VAL A 207 O ILE A 254 SHEET 4 AA3 5 TYR A 168 ASN A 173 -1 N THR A 169 O VAL A 208 SHEET 5 AA3 5 LYS A 195 THR A 199 1 O ILE A 197 N ILE A 172 SITE 1 AC1 2 ASP A 90 ARG A 94 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000