HEADER VIRUS LIKE PARTICLE 27-JAN-21 7LIM TITLE THERMOTOGA MARITIMA ENCAPSULIN NANOCOMPARTMENT PORE MUTANT S6E COMPND MOL_ID: 1; COMPND 2 MOLECULE: MARITIMACIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: THERMOTOGA BACTERIOCIN, ENCAPSULIN NANOCOMPARTMENT PORE; COMPND 5 EC: 3.4.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA (STRAIN ATCC 43589 / MSB8 / SOURCE 3 DSM 3109 / JCM 10099); SOURCE 4 ORGANISM_TAXID: 243274; SOURCE 5 STRAIN: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099; SOURCE 6 GENE: TM_0785; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ENCAPSULIN, NANOCOMPARTMENT, VIRUS LIKE PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR M.P.ANDREAS,L.ADAMSON,N.TASNEEM,W.CLOSE,T.GIESSEN,Y.H.LAU REVDAT 2 16-FEB-22 7LIM 1 JRNL REVDAT 1 09-FEB-22 7LIM 0 JRNL AUTH L.S.R.ADAMSON,N.TASNEEM,M.P.ANDREAS,W.CLOSE,E.N.JENNER, JRNL AUTH 2 T.N.SZYSZKA,R.YOUNG,L.C.CHEAH,A.NORMAN, JRNL AUTH 3 H.I.MACDERMOTT-OPESKIN,M.L.O'MARA,F.SAINSBURY,T.W.GIESSEN, JRNL AUTH 4 Y.H.LAU JRNL TITL PORE STRUCTURE CONTROLS STABILITY AND MOLECULAR FLUX IN JRNL TITL 2 ENGINEERED PROTEIN CAGES. JRNL REF SCI ADV V. 8 L7346 2022 JRNL REFN ESSN 2375-2548 JRNL PMID 35119930 JRNL DOI 10.1126/SCIADV.ABL7346 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : LEGINON, CRYOSPARC, UCSF CHIMERA, COOT, REMARK 3 CRYOSPARC, CRYOSPARC, CRYOSPARC, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 3DKT REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : 37.490 REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.750 REMARK 3 NUMBER OF PARTICLES : 118595 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7LIM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1000254437. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : THERMOTOGA MARITIMA ENCAPSULIN REMARK 245 NANOCOMPARTMENT PORE MUTANT S6E REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 2.00 REMARK 245 SAMPLE SUPPORT DETAILS : 60 SECONDS AT 5 MA REMARK 245 SAMPLE VITRIFICATION DETAILS : BLOT 4 SECONDS, FORCE 20 REMARK 245 IMMEDIATELY PRIOR TO PLUNGING REMARK 245 INTO ETHANE REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : THERMOTOGA MARATIMA ENCAPSULIN REMARK 245 PORE MUTANT WITH DELETION OF AMINO ACIDS E184-L190 REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS GLACIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : -1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : -1800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6900.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 45000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.809016 0.500000 0.309018 -116.28957 REMARK 350 BIOMT2 2 -0.500001 0.309017 0.809016 71.87113 REMARK 350 BIOMT3 2 0.309017 -0.809017 0.500001 188.16014 REMARK 350 BIOMT1 3 0.499998 0.309017 0.809018 -116.28929 REMARK 350 BIOMT2 3 -0.309018 -0.809017 0.499999 304.45007 REMARK 350 BIOMT3 3 0.809017 -0.500000 -0.309015 188.15996 REMARK 350 BIOMT1 4 0.499998 -0.309018 0.809017 0.00045 REMARK 350 BIOMT2 4 0.309017 -0.809017 -0.500000 376.32063 REMARK 350 BIOMT3 4 0.809018 0.499999 -0.309015 -0.00029 REMARK 350 BIOMT1 5 0.809016 -0.500001 0.309017 71.87118 REMARK 350 BIOMT2 5 0.500000 0.309017 -0.809017 188.16014 REMARK 350 BIOMT3 5 0.309018 0.809016 0.500001 -116.28954 REMARK 350 BIOMT1 6 0.309018 0.809016 0.500001 -116.28978 REMARK 350 BIOMT2 6 0.809016 -0.500001 0.309017 71.87168 REMARK 350 BIOMT3 6 0.500001 0.309017 -0.809016 188.15978 REMARK 350 BIOMT1 7 0.000000 0.000000 1.000000 -0.00020 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00055 REMARK 350 BIOMT3 7 0.000000 1.000000 0.000000 -0.00036 REMARK 350 BIOMT1 8 0.309017 -0.809017 0.500000 188.15991 REMARK 350 BIOMT2 8 0.809017 0.500000 0.309017 -116.28908 REMARK 350 BIOMT3 8 -0.500001 0.309017 0.809017 71.87077 REMARK 350 BIOMT1 9 0.809018 -0.500000 -0.309015 188.15967 REMARK 350 BIOMT2 9 0.499998 0.309017 0.809018 -116.28890 REMARK 350 BIOMT3 9 -0.309018 -0.809017 0.499999 304.44971 REMARK 350 BIOMT1 10 0.809018 0.499999 -0.309015 -0.00059 REMARK 350 BIOMT2 10 0.499998 -0.309018 0.809018 0.00084 REMARK 350 BIOMT3 10 0.309017 -0.809017 -0.500000 376.32027 REMARK 350 BIOMT1 11 -0.809019 -0.499998 0.309016 376.31981 REMARK 350 BIOMT2 11 -0.499998 0.309017 -0.809018 376.31991 REMARK 350 BIOMT3 11 0.309016 -0.809018 -0.499998 376.32037 REMARK 350 BIOMT1 12 -0.309019 -0.809017 -0.499999 492.60937 REMARK 350 BIOMT2 12 -0.809015 0.500002 -0.309018 304.44880 REMARK 350 BIOMT3 12 0.500001 0.309015 -0.809017 188.16021 REMARK 350 BIOMT1 13 0.000000 -0.000002 -1.000000 376.32016 REMARK 350 BIOMT2 13 -1.000000 0.000002 0.000000 376.31965 REMARK 350 BIOMT3 13 0.000002 1.000000 -0.000002 -0.00026 REMARK 350 BIOMT1 14 -0.309016 0.809016 -0.500002 188.15991 REMARK 350 BIOMT2 14 -0.809017 -0.500000 -0.309016 492.60938 REMARK 350 BIOMT3 14 -0.500000 0.309019 0.809016 71.87033 REMARK 350 BIOMT1 15 -0.809017 0.500002 0.309014 188.15969 REMARK 350 BIOMT2 15 -0.499999 -0.309018 -0.809017 492.60954 REMARK 350 BIOMT3 15 -0.309019 -0.809016 0.500001 304.44927 REMARK 350 BIOMT1 16 -0.499999 -0.309018 -0.809017 492.60915 REMARK 350 BIOMT2 16 -0.309018 -0.809016 0.500001 304.44936 REMARK 350 BIOMT3 16 -0.809017 0.500001 0.309015 188.15988 REMARK 350 BIOMT1 17 -0.499998 0.309017 -0.809019 376.31958 REMARK 350 BIOMT2 17 0.309017 -0.809018 -0.499998 376.32047 REMARK 350 BIOMT3 17 -0.809019 -0.499998 0.309016 376.32004 REMARK 350 BIOMT1 18 -0.809015 0.500002 -0.309019 304.44841 REMARK 350 BIOMT2 18 0.500002 0.309015 -0.809017 188.16031 REMARK 350 BIOMT3 18 -0.309019 -0.809017 -0.499999 492.60956 REMARK 350 BIOMT1 19 -1.000000 0.000002 0.000000 376.31915 REMARK 350 BIOMT2 19 0.000002 1.000000 -0.000001 -0.00016 REMARK 350 BIOMT3 19 0.000000 -0.000001 -1.000000 376.32029 REMARK 350 BIOMT1 20 -0.809018 -0.500000 -0.309016 492.60889 REMARK 350 BIOMT2 20 -0.500000 0.309019 0.809016 71.87042 REMARK 350 BIOMT3 20 -0.309016 0.809016 -0.500002 188.16004 REMARK 350 BIOMT1 21 0.809016 -0.500000 0.309020 71.87058 REMARK 350 BIOMT2 21 -0.500002 -0.309016 0.809016 188.16060 REMARK 350 BIOMT3 21 -0.309016 -0.809017 -0.500000 492.60933 REMARK 350 BIOMT1 22 1.000000 -0.000002 0.000002 0.00006 REMARK 350 BIOMT2 22 -0.000002 -1.000000 0.000000 376.32091 REMARK 350 BIOMT3 22 0.000002 0.000000 -1.000000 376.31965 REMARK 350 BIOMT1 23 0.809018 0.499998 0.309017 -116.28930 REMARK 350 BIOMT2 23 0.499999 -0.309018 -0.809017 304.45005 REMARK 350 BIOMT3 23 -0.309015 0.809018 -0.500000 188.15927 REMARK 350 BIOMT1 24 0.500001 0.309017 0.809016 -116.28956 REMARK 350 BIOMT2 24 0.309017 0.809016 -0.500001 71.87111 REMARK 350 BIOMT3 24 -0.809016 0.500001 0.309017 188.15946 REMARK 350 BIOMT1 25 0.499999 -0.309016 0.809018 -0.00036 REMARK 350 BIOMT2 25 -0.309018 0.809018 0.499998 0.00028 REMARK 350 BIOMT3 25 -0.809017 -0.500000 0.309017 376.31994 REMARK 350 BIOMT1 26 0.000002 1.000000 -0.000002 -0.00049 REMARK 350 BIOMT2 26 0.000000 -0.000002 -1.000000 376.32055 REMARK 350 BIOMT3 26 -1.000000 0.000002 0.000000 376.31945 REMARK 350 BIOMT1 27 -0.500000 0.309020 0.809016 71.87004 REMARK 350 BIOMT2 27 -0.309016 0.809016 -0.500002 188.16024 REMARK 350 BIOMT3 27 -0.809018 -0.500000 -0.309016 492.60912 REMARK 350 BIOMT1 28 -0.309019 -0.809015 0.500001 304.44897 REMARK 350 BIOMT2 28 -0.809017 0.500002 0.309015 188.15998 REMARK 350 BIOMT3 28 -0.499999 -0.309018 -0.809017 492.60935 REMARK 350 BIOMT1 29 0.309016 -0.809019 -0.499998 376.32014 REMARK 350 BIOMT2 29 -0.809019 -0.499998 0.309017 376.32013 REMARK 350 BIOMT3 29 -0.499998 0.309017 -0.809018 376.31981 REMARK 350 BIOMT1 30 0.500002 0.309014 -0.809017 188.16002 REMARK 350 BIOMT2 30 -0.309019 -0.809017 -0.499999 492.60976 REMARK 350 BIOMT3 30 -0.809015 0.500002 -0.309019 304.44870 REMARK 350 BIOMT1 31 -0.309018 -0.809017 0.499999 304.44957 REMARK 350 BIOMT2 31 0.809017 -0.500000 -0.309016 188.16022 REMARK 350 BIOMT3 31 0.499999 0.309017 0.809018 -116.28910 REMARK 350 BIOMT1 32 0.309017 -0.809017 -0.500000 376.32007 REMARK 350 BIOMT2 32 0.809018 0.500000 -0.309015 -0.00010 REMARK 350 BIOMT3 32 0.499999 -0.309018 0.809017 0.00058 REMARK 350 BIOMT1 33 0.500001 0.309017 -0.809016 188.15955 REMARK 350 BIOMT2 33 0.309017 0.809016 0.500001 -116.28929 REMARK 350 BIOMT3 33 0.809016 -0.500001 0.309017 71.87132 REMARK 350 BIOMT1 34 0.000000 1.000000 0.000000 -0.00055 REMARK 350 BIOMT2 34 0.000000 0.000000 1.000000 0.00036 REMARK 350 BIOMT3 34 1.000000 0.000000 0.000000 0.00020 REMARK 350 BIOMT1 35 -0.500001 0.309017 0.809017 71.87063 REMARK 350 BIOMT2 35 0.309017 -0.809017 0.500000 188.16050 REMARK 350 BIOMT3 35 0.809017 0.500000 0.309018 -116.28934 REMARK 350 BIOMT1 36 -0.500000 0.309017 -0.809017 376.31951 REMARK 350 BIOMT2 36 -0.309015 0.809018 0.500000 -0.00043 REMARK 350 BIOMT3 36 0.809018 0.499999 -0.309018 0.00035 REMARK 350 BIOMT1 37 -0.809017 0.500000 -0.309018 304.44901 REMARK 350 BIOMT2 37 -0.500000 -0.309016 0.809017 188.15989 REMARK 350 BIOMT3 37 0.309017 0.809018 0.499999 -116.28932 REMARK 350 BIOMT1 38 -1.000000 0.000000 -0.000002 376.31996 REMARK 350 BIOMT2 38 0.000000 -1.000000 0.000001 376.32020 REMARK 350 BIOMT3 38 -0.000002 0.000001 1.000000 0.00010 REMARK 350 BIOMT1 39 -0.809017 -0.499999 -0.309019 492.60916 REMARK 350 BIOMT2 39 0.500002 -0.309018 -0.809016 304.44934 REMARK 350 BIOMT3 39 0.309014 -0.809017 0.500001 188.16057 REMARK 350 BIOMT1 40 -0.500000 -0.309016 -0.809018 492.60888 REMARK 350 BIOMT2 40 0.309020 0.809016 -0.500000 71.87041 REMARK 350 BIOMT3 40 0.809016 -0.500002 -0.309016 188.16073 REMARK 350 BIOMT1 41 0.809016 -0.500002 -0.309016 188.16060 REMARK 350 BIOMT2 41 -0.500000 -0.309016 -0.809017 492.60937 REMARK 350 BIOMT3 41 0.309020 0.809016 -0.500000 71.87031 REMARK 350 BIOMT1 42 0.809018 0.499998 -0.309018 0.00022 REMARK 350 BIOMT2 42 -0.500000 0.309017 -0.809017 376.32007 REMARK 350 BIOMT3 42 -0.309015 0.809018 0.499999 -0.00062 REMARK 350 BIOMT1 43 0.309017 0.809018 0.499999 -116.28951 REMARK 350 BIOMT2 43 -0.809017 0.500000 -0.309018 304.44950 REMARK 350 BIOMT3 43 -0.500000 -0.309015 0.809017 188.15964 REMARK 350 BIOMT1 44 -0.000002 0.000002 1.000000 -0.00013 REMARK 350 BIOMT2 44 -1.000000 0.000000 -0.000002 376.32035 REMARK 350 BIOMT3 44 0.000000 -1.000000 0.000002 376.32000 REMARK 350 BIOMT1 45 0.309014 -0.809017 0.500001 188.16038 REMARK 350 BIOMT2 45 -0.809017 -0.499999 -0.309019 492.60955 REMARK 350 BIOMT3 45 0.500001 -0.309019 -0.809016 304.44925 REMARK 350 BIOMT1 46 -0.309018 0.809017 0.499999 -0.00011 REMARK 350 BIOMT2 46 -0.809017 -0.500000 0.309017 376.32030 REMARK 350 BIOMT3 46 0.499999 -0.309016 0.809018 -0.00006 REMARK 350 BIOMT1 47 -0.500002 -0.309016 0.809016 188.16027 REMARK 350 BIOMT2 47 -0.309016 -0.809017 -0.500000 492.60959 REMARK 350 BIOMT3 47 0.809016 -0.500000 0.309019 71.87088 REMARK 350 BIOMT1 48 -0.000002 -1.000000 0.000000 376.32051 REMARK 350 BIOMT2 48 0.000002 0.000000 -1.000000 376.31984 REMARK 350 BIOMT3 48 1.000000 -0.000002 0.000002 0.00029 REMARK 350 BIOMT1 49 0.499999 -0.309018 -0.809017 304.44955 REMARK 350 BIOMT2 49 -0.309016 0.809018 -0.500000 188.15953 REMARK 350 BIOMT3 49 0.809018 0.499998 0.309017 -116.28911 REMARK 350 BIOMT1 50 0.309017 0.809017 -0.500001 71.87062 REMARK 350 BIOMT2 50 -0.809017 0.500000 0.309017 188.15981 REMARK 350 BIOMT3 50 0.500000 0.309017 0.809017 -116.28933 REMARK 350 BIOMT1 51 -0.500000 -0.309015 0.809018 188.15934 REMARK 350 BIOMT2 51 0.309017 0.809018 0.499999 -116.28912 REMARK 350 BIOMT3 51 -0.809017 0.500000 -0.309018 304.44914 REMARK 350 BIOMT1 52 0.000000 -1.000000 0.000002 376.31971 REMARK 350 BIOMT2 52 -0.000002 0.000002 1.000000 0.00019 REMARK 350 BIOMT3 52 -1.000000 0.000000 -0.000002 376.32009 REMARK 350 BIOMT1 53 0.500002 -0.309019 -0.809015 304.44895 REMARK 350 BIOMT2 53 0.309014 -0.809017 0.500002 188.16067 REMARK 350 BIOMT3 53 -0.809017 -0.499999 -0.309019 492.60935 REMARK 350 BIOMT1 54 0.309020 0.809016 -0.500000 71.87002 REMARK 350 BIOMT2 54 0.809016 -0.500002 -0.309016 188.16093 REMARK 350 BIOMT3 54 -0.500000 -0.309016 -0.809018 492.60912 REMARK 350 BIOMT1 55 -0.309015 0.809018 0.500000 -0.00092 REMARK 350 BIOMT2 55 0.809018 0.499998 -0.309018 0.00061 REMARK 350 BIOMT3 55 -0.500000 0.309017 -0.809017 376.31971 REMARK 350 BIOMT1 56 0.000002 0.000000 -1.000000 376.31935 REMARK 350 BIOMT2 56 1.000000 -0.000002 0.000002 0.00039 REMARK 350 BIOMT3 56 -0.000002 -1.000000 0.000000 376.32065 REMARK 350 BIOMT1 57 -0.309015 0.809018 -0.500000 188.15898 REMARK 350 BIOMT2 57 0.809018 0.499998 0.309017 -116.28891 REMARK 350 BIOMT3 57 0.500000 -0.309018 -0.809017 304.44969 REMARK 350 BIOMT1 58 -0.809016 0.500001 0.309017 188.15922 REMARK 350 BIOMT2 58 0.500001 0.309017 0.809017 -116.28907 REMARK 350 BIOMT3 58 0.309017 0.809017 -0.500001 71.87075 REMARK 350 BIOMT1 59 -0.809017 -0.500000 0.309017 376.31974 REMARK 350 BIOMT2 59 0.500000 -0.309016 0.809018 0.00013 REMARK 350 BIOMT3 59 -0.309018 0.809017 0.499999 0.00002 REMARK 350 BIOMT1 60 -0.309016 -0.809017 -0.500000 492.60910 REMARK 350 BIOMT2 60 0.809016 -0.500000 0.309019 71.87097 REMARK 350 BIOMT3 60 -0.500002 -0.309016 0.809016 188.16040 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 36 20.96 -142.92 REMARK 500 GLU A 124 -8.83 76.56 REMARK 500 GLU A 231 -168.06 -124.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-23383 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-23379 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-23380 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-23381 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-23382 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-23384 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-23385 RELATED DB: EMDB DBREF 7LIM A 1 258 UNP Q9WZP2 MARIT_THEMA 1 265 SEQADV 7LIM A UNP Q9WZP2 GLU 184 DELETION SEQADV 7LIM A UNP Q9WZP2 ALA 185 DELETION SEQADV 7LIM A UNP Q9WZP2 GLY 186 DELETION SEQADV 7LIM A UNP Q9WZP2 HIS 187 DELETION SEQADV 7LIM A UNP Q9WZP2 TYR 188 DELETION SEQADV 7LIM A UNP Q9WZP2 PRO 189 DELETION SEQADV 7LIM A UNP Q9WZP2 LEU 190 DELETION SEQRES 1 A 258 MET GLU PHE LEU LYS ARG SER PHE ALA PRO LEU THR GLU SEQRES 2 A 258 LYS GLN TRP GLN GLU ILE ASP ASN ARG ALA ARG GLU ILE SEQRES 3 A 258 PHE LYS THR GLN LEU TYR GLY ARG LYS PHE VAL ASP VAL SEQRES 4 A 258 GLU GLY PRO TYR GLY TRP GLU TYR ALA ALA HIS PRO LEU SEQRES 5 A 258 GLY GLU VAL GLU VAL LEU SER ASP GLU ASN GLU VAL VAL SEQRES 6 A 258 LYS TRP GLY LEU ARG LYS SER LEU PRO LEU ILE GLU LEU SEQRES 7 A 258 ARG ALA THR PHE THR LEU ASP LEU TRP GLU LEU ASP ASN SEQRES 8 A 258 LEU GLU ARG GLY LYS PRO ASN VAL ASP LEU SER SER LEU SEQRES 9 A 258 GLU GLU THR VAL ARG LYS VAL ALA GLU PHE GLU ASP GLU SEQRES 10 A 258 VAL ILE PHE ARG GLY CYS GLU LYS SER GLY VAL LYS GLY SEQRES 11 A 258 LEU LEU SER PHE GLU GLU ARG LYS ILE GLU CYS GLY SER SEQRES 12 A 258 THR PRO LYS ASP LEU LEU GLU ALA ILE VAL ARG ALA LEU SEQRES 13 A 258 SER ILE PHE SER LYS ASP GLY ILE GLU GLY PRO TYR THR SEQRES 14 A 258 LEU VAL ILE ASN THR ASP ARG TRP ILE ASN PHE LEU LYS SEQRES 15 A 258 GLU GLU LYS ARG VAL GLU GLU CYS LEU ARG GLY GLY LYS SEQRES 16 A 258 ILE ILE THR THR PRO ARG ILE GLU ASP ALA LEU VAL VAL SEQRES 17 A 258 SER GLU ARG GLY GLY ASP PHE LYS LEU ILE LEU GLY GLN SEQRES 18 A 258 ASP LEU SER ILE GLY TYR GLU ASP ARG GLU LYS ASP ALA SEQRES 19 A 258 VAL ARG LEU PHE ILE THR GLU THR PHE THR PHE GLN VAL SEQRES 20 A 258 VAL ASN PRO GLU ALA LEU ILE LEU LEU LYS PHE HET RBF A 301 27 HETNAM RBF RIBOFLAVIN HETSYN RBF RIBOFLAVINE; VITAMIN B2 FORMUL 2 RBF C17 H20 N4 O6 HELIX 1 AA1 LYS A 5 ALA A 9 5 5 HELIX 2 AA2 THR A 12 LEU A 31 1 20 HELIX 3 AA3 TYR A 32 PHE A 36 5 5 HELIX 4 AA4 LEU A 86 ASP A 90 1 5 HELIX 5 AA5 ASP A 90 GLY A 95 1 6 HELIX 6 AA6 SER A 102 GLY A 122 1 21 HELIX 7 AA7 GLY A 130 PHE A 134 5 5 HELIX 8 AA8 THR A 144 LEU A 156 1 13 HELIX 9 AA9 SER A 157 ASP A 162 1 6 HELIX 10 AB1 ARG A 176 LEU A 181 5 6 HELIX 11 AB2 GLU A 184 LEU A 191 1 8 HELIX 12 AB3 ASN A 249 GLU A 251 5 3 SHEET 1 AA1 4 ASP A 38 GLU A 40 0 SHEET 2 AA1 4 PHE A 215 ARG A 230 1 O LEU A 217 N GLU A 40 SHEET 3 AA1 4 ALA A 234 VAL A 247 -1 O GLN A 246 N LYS A 216 SHEET 4 AA1 4 ILE A 76 ASP A 85 -1 N PHE A 82 O LEU A 237 SHEET 1 AA2 2 ALA A 49 VAL A 57 0 SHEET 2 AA2 2 GLY A 68 PRO A 74 -1 O LEU A 69 N GLU A 56 SHEET 1 AA3 5 LYS A 138 ILE A 139 0 SHEET 2 AA3 5 LEU A 253 LEU A 256 1 O LEU A 255 N ILE A 139 SHEET 3 AA3 5 ALA A 205 SER A 209 -1 N ALA A 205 O LEU A 256 SHEET 4 AA3 5 TYR A 168 ASN A 173 -1 N VAL A 171 O LEU A 206 SHEET 5 AA3 5 LYS A 195 THR A 199 1 O ILE A 197 N ILE A 172 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000