HEADER TRANSFERASE 05-FEB-21 7LMM TITLE CRYSTAL STRUCTURE OF BOVINE DNMT1 BAH1 DOMAIN IN COMPLEX WITH H4K20ME2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (CYTOSINE-5)-METHYLTRANSFERASE 1,DNA (CYTOSINE-5)- COMPND 3 METHYLTRANSFERASE 1; COMPND 4 CHAIN: A, B, C, D; COMPND 5 SYNONYM: DNMT1,DNMT1; COMPND 6 EC: 2.1.1.37,2.1.1.37; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: HISTONE H4; COMPND 10 CHAIN: F, G, I, H; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 GENE: DNMT1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS DNA METHYLATION, DNA METHYLTRANSFERASE 1, HISTONE MODIFICATION, KEYWDS 2 ALLOSTERIC REGULATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR W.REN,J.SONG REVDAT 3 18-OCT-23 7LMM 1 REMARK REVDAT 2 19-MAY-21 7LMM 1 JRNL REVDAT 1 17-FEB-21 7LMM 0 JRNL AUTH W.REN,H.FAN,S.A.GRIMM,J.J.KIM,L.LI,Y.GUO,C.J.PETELL,X.F.TAN, JRNL AUTH 2 Z.M.ZHANG,J.P.COAN,J.YIN,D.I.KIM,L.GAO,L.CAI,N.KHUDAVERDYAN, JRNL AUTH 3 B.CETIN,D.J.PATEL,Y.WANG,Q.CUI,B.D.STRAHL,O.GOZANI, JRNL AUTH 4 K.M.MILLER,S.E.O'LEARY,P.A.WADE,G.G.WANG,J.SONG JRNL TITL DNMT1 READS HETEROCHROMATIC H4K20ME3 TO REINFORCE LINE-1 DNA JRNL TITL 2 METHYLATION. JRNL REF NAT COMMUN V. 12 2490 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 33941775 JRNL DOI 10.1038/S41467-021-22665-4 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 18807 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1881 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.9060 - 6.5651 0.99 1403 157 0.2019 0.2485 REMARK 3 2 6.5651 - 5.2165 0.99 1340 148 0.1836 0.2266 REMARK 3 3 5.2165 - 4.5587 1.00 1328 147 0.1595 0.2098 REMARK 3 4 4.5587 - 4.1426 1.00 1308 146 0.1733 0.2128 REMARK 3 5 4.1426 - 3.8461 0.99 1292 143 0.1901 0.3007 REMARK 3 6 3.8461 - 3.6196 1.00 1313 147 0.2009 0.2849 REMARK 3 7 3.6196 - 3.4385 1.00 1287 142 0.2282 0.3161 REMARK 3 8 3.4385 - 3.2889 1.00 1305 146 0.2421 0.2809 REMARK 3 9 3.2889 - 3.1624 1.00 1289 143 0.2380 0.2667 REMARK 3 10 3.1624 - 3.0534 0.98 1259 140 0.2750 0.3357 REMARK 3 11 3.0534 - 2.9579 1.00 1266 141 0.2738 0.3455 REMARK 3 12 2.9579 - 2.8734 1.00 1290 143 0.2918 0.4086 REMARK 3 13 2.8734 - 2.7980 0.97 1246 138 0.3070 0.3466 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5298 REMARK 3 ANGLE : 0.962 7214 REMARK 3 CHIRALITY : 0.051 785 REMARK 3 PLANARITY : 0.006 923 REMARK 3 DIHEDRAL : 9.335 3110 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 22 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 724:727 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.111 13.637 -22.117 REMARK 3 T TENSOR REMARK 3 T11: 0.5228 T22: 0.6793 REMARK 3 T33: 0.8003 T12: 0.0860 REMARK 3 T13: -0.0868 T23: -0.0641 REMARK 3 L TENSOR REMARK 3 L11: 2.7979 L22: 3.7934 REMARK 3 L33: 3.7717 L12: -2.2025 REMARK 3 L13: 1.4733 L23: 1.3167 REMARK 3 S TENSOR REMARK 3 S11: 0.6262 S12: -0.2798 S13: -0.7544 REMARK 3 S21: 0.2231 S22: 0.0319 S23: -0.7208 REMARK 3 S31: 0.5475 S32: 0.0723 S33: -0.6387 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 728:740 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.992 12.386 -30.550 REMARK 3 T TENSOR REMARK 3 T11: 0.3226 T22: 0.3605 REMARK 3 T33: 0.3984 T12: -0.0852 REMARK 3 T13: 0.0076 T23: -0.1025 REMARK 3 L TENSOR REMARK 3 L11: 7.3993 L22: 7.7393 REMARK 3 L33: 6.7593 L12: -0.9977 REMARK 3 L13: -1.4228 L23: 0.1588 REMARK 3 S TENSOR REMARK 3 S11: -0.4410 S12: 0.5534 S13: -0.4527 REMARK 3 S21: -0.4732 S22: -0.2711 S23: 0.6176 REMARK 3 S31: 0.7963 S32: -1.0637 S33: 0.4194 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 741:782 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.028 17.460 -20.508 REMARK 3 T TENSOR REMARK 3 T11: 0.2292 T22: 0.3305 REMARK 3 T33: 0.2759 T12: 0.0091 REMARK 3 T13: 0.0617 T23: -0.0720 REMARK 3 L TENSOR REMARK 3 L11: 7.7747 L22: 4.6963 REMARK 3 L33: 8.1251 L12: 1.5966 REMARK 3 L13: 3.6184 L23: 1.9584 REMARK 3 S TENSOR REMARK 3 S11: 0.1191 S12: -0.2045 S13: -0.1188 REMARK 3 S21: 0.1598 S22: 0.0948 S23: -0.0169 REMARK 3 S31: 0.3904 S32: 0.3181 S33: -0.1660 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 783:809 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.176 25.300 -19.089 REMARK 3 T TENSOR REMARK 3 T11: 0.2054 T22: 0.3802 REMARK 3 T33: 0.4167 T12: 0.0621 REMARK 3 T13: 0.0173 T23: -0.0462 REMARK 3 L TENSOR REMARK 3 L11: 7.3436 L22: 8.7418 REMARK 3 L33: 2.5411 L12: 5.5555 REMARK 3 L13: 2.0652 L23: 1.1517 REMARK 3 S TENSOR REMARK 3 S11: 0.1190 S12: 0.1207 S13: -0.7275 REMARK 3 S21: -0.4354 S22: 0.6094 S23: -1.7444 REMARK 3 S31: -0.6949 S32: 0.3221 S33: -0.5587 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 810:834 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.329 24.117 -18.302 REMARK 3 T TENSOR REMARK 3 T11: 0.1963 T22: 0.4282 REMARK 3 T33: 0.3060 T12: -0.0144 REMARK 3 T13: 0.0335 T23: -0.0269 REMARK 3 L TENSOR REMARK 3 L11: 1.9196 L22: 9.1539 REMARK 3 L33: 1.9911 L12: 3.4726 REMARK 3 L13: 1.3496 L23: 0.8216 REMARK 3 S TENSOR REMARK 3 S11: 0.2481 S12: -0.3002 S13: -0.2363 REMARK 3 S21: 0.2191 S22: -0.2422 S23: -0.4553 REMARK 3 S31: 0.1002 S32: -0.0153 S33: 0.0974 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 835:875 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.764 44.102 14.720 REMARK 3 T TENSOR REMARK 3 T11: 0.2996 T22: 0.4975 REMARK 3 T33: 0.3519 T12: 0.0069 REMARK 3 T13: -0.0083 T23: -0.1660 REMARK 3 L TENSOR REMARK 3 L11: 0.7495 L22: 3.1837 REMARK 3 L33: 6.1719 L12: -0.4587 REMARK 3 L13: -0.8301 L23: 0.6498 REMARK 3 S TENSOR REMARK 3 S11: -0.3222 S12: 0.1608 S13: -0.0879 REMARK 3 S21: 0.5262 S22: 0.2061 S23: -0.3643 REMARK 3 S31: -0.2810 S32: -0.2219 S33: 0.1583 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 876:897 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.051 49.645 31.291 REMARK 3 T TENSOR REMARK 3 T11: 0.5662 T22: 0.3497 REMARK 3 T33: 0.3519 T12: -0.0848 REMARK 3 T13: 0.0529 T23: -0.1062 REMARK 3 L TENSOR REMARK 3 L11: 5.4693 L22: 6.6220 REMARK 3 L33: 5.4221 L12: -3.5026 REMARK 3 L13: -1.5289 L23: 2.5067 REMARK 3 S TENSOR REMARK 3 S11: -0.2546 S12: -0.1726 S13: -0.5653 REMARK 3 S21: 1.0592 S22: -0.4039 S23: 0.6332 REMARK 3 S31: 0.0944 S32: -0.2437 S33: 0.5093 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN B AND RESID 725:727 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.253 30.705 -55.607 REMARK 3 T TENSOR REMARK 3 T11: 0.6283 T22: 0.4929 REMARK 3 T33: 0.6381 T12: 0.0820 REMARK 3 T13: -0.1932 T23: 0.2138 REMARK 3 L TENSOR REMARK 3 L11: 5.4810 L22: 6.5833 REMARK 3 L33: 9.1686 L12: 1.4821 REMARK 3 L13: 2.4403 L23: 2.6901 REMARK 3 S TENSOR REMARK 3 S11: -0.9889 S12: -0.2348 S13: 1.1669 REMARK 3 S21: 0.3771 S22: -0.2615 S23: -0.9608 REMARK 3 S31: -1.1807 S32: 0.2283 S33: 1.0849 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN B AND RESID 728:782 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.400 27.855 -60.526 REMARK 3 T TENSOR REMARK 3 T11: 0.5115 T22: 0.5072 REMARK 3 T33: 0.6388 T12: 0.1381 REMARK 3 T13: -0.0290 T23: 0.1930 REMARK 3 L TENSOR REMARK 3 L11: 6.9366 L22: 4.7056 REMARK 3 L33: 4.1449 L12: -1.8771 REMARK 3 L13: 0.5293 L23: 1.1557 REMARK 3 S TENSOR REMARK 3 S11: -0.1068 S12: 0.2266 S13: 0.2771 REMARK 3 S21: -0.3046 S22: -0.0542 S23: 0.6587 REMARK 3 S31: -0.8413 S32: -0.2455 S33: 0.0614 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN B AND RESID 783:839 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.554 17.629 -56.970 REMARK 3 T TENSOR REMARK 3 T11: 0.3245 T22: 0.5135 REMARK 3 T33: 0.4671 T12: 0.1474 REMARK 3 T13: -0.0093 T23: 0.2207 REMARK 3 L TENSOR REMARK 3 L11: 3.1537 L22: 3.3406 REMARK 3 L33: 3.0150 L12: -0.6025 REMARK 3 L13: 1.3490 L23: -2.2992 REMARK 3 S TENSOR REMARK 3 S11: -0.1890 S12: 0.5753 S13: 0.4819 REMARK 3 S21: -0.1222 S22: -0.2268 S23: -0.2749 REMARK 3 S31: -0.2683 S32: 0.3739 S33: 0.3409 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN B AND RESID 840:867 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.178 -9.210 -73.741 REMARK 3 T TENSOR REMARK 3 T11: 0.4061 T22: 0.4382 REMARK 3 T33: 0.4769 T12: -0.1333 REMARK 3 T13: -0.0380 T23: 0.0456 REMARK 3 L TENSOR REMARK 3 L11: 4.8516 L22: 4.5289 REMARK 3 L33: 3.4623 L12: 1.5678 REMARK 3 L13: -3.7201 L23: -2.5137 REMARK 3 S TENSOR REMARK 3 S11: -0.0615 S12: -0.9075 S13: -0.8023 REMARK 3 S21: 0.3926 S22: -0.4974 S23: -0.1542 REMARK 3 S31: 0.1014 S32: 0.3522 S33: 0.4104 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: ( CHAIN B AND RESID 868:897 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.113 -16.361 -84.875 REMARK 3 T TENSOR REMARK 3 T11: 0.4935 T22: 0.4602 REMARK 3 T33: 0.6292 T12: -0.0707 REMARK 3 T13: -0.0619 T23: 0.0930 REMARK 3 L TENSOR REMARK 3 L11: 3.9561 L22: 2.3830 REMARK 3 L33: 7.6327 L12: 2.2729 REMARK 3 L13: 2.0595 L23: -0.3350 REMARK 3 S TENSOR REMARK 3 S11: -0.1065 S12: -0.2792 S13: 0.5294 REMARK 3 S21: -0.8408 S22: 0.4793 S23: 1.1775 REMARK 3 S31: 0.3214 S32: -0.6418 S33: -0.1713 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: ( CHAIN C AND RESID 725:727 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.624 13.459 -19.140 REMARK 3 T TENSOR REMARK 3 T11: 0.1466 T22: 0.4764 REMARK 3 T33: 0.8429 T12: 0.1388 REMARK 3 T13: 0.0470 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 3.0828 L22: 6.9046 REMARK 3 L33: 1.0215 L12: 4.3474 REMARK 3 L13: 0.2056 L23: 0.8893 REMARK 3 S TENSOR REMARK 3 S11: -0.3451 S12: 0.2119 S13: -0.9470 REMARK 3 S21: -0.8976 S22: 0.3352 S23: 0.6570 REMARK 3 S31: -0.3787 S32: -0.0032 S33: 0.0031 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: ( CHAIN C AND RESID 728:782 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.070 15.286 -15.724 REMARK 3 T TENSOR REMARK 3 T11: 0.3707 T22: 0.5754 REMARK 3 T33: 0.9679 T12: -0.0385 REMARK 3 T13: 0.1156 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 7.7522 L22: 4.0210 REMARK 3 L33: 2.2567 L12: 2.0359 REMARK 3 L13: 1.1188 L23: 0.0824 REMARK 3 S TENSOR REMARK 3 S11: -0.1772 S12: -0.0385 S13: -0.8625 REMARK 3 S21: 0.1660 S22: 0.1443 S23: 1.3613 REMARK 3 S31: 0.3431 S32: -0.4974 S33: -0.0051 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: ( CHAIN C AND RESID 783:824 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.731 24.194 -17.385 REMARK 3 T TENSOR REMARK 3 T11: 0.2189 T22: 0.3167 REMARK 3 T33: 0.4075 T12: -0.0220 REMARK 3 T13: 0.0729 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 5.4183 L22: 7.9353 REMARK 3 L33: 2.4963 L12: 1.6922 REMARK 3 L13: 0.0296 L23: -0.6045 REMARK 3 S TENSOR REMARK 3 S11: -0.2538 S12: -0.0215 S13: -0.6015 REMARK 3 S21: -0.3172 S22: 0.0380 S23: 0.3810 REMARK 3 S31: 0.1844 S32: -0.1156 S33: 0.1316 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: ( CHAIN C AND RESID 825:834 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.536 26.202 -8.306 REMARK 3 T TENSOR REMARK 3 T11: 0.5794 T22: 0.7806 REMARK 3 T33: 0.6338 T12: -0.0176 REMARK 3 T13: 0.2208 T23: -0.0550 REMARK 3 L TENSOR REMARK 3 L11: 2.2913 L22: 4.6768 REMARK 3 L33: 4.0296 L12: -0.2406 REMARK 3 L13: 2.6049 L23: 0.1512 REMARK 3 S TENSOR REMARK 3 S11: -0.0858 S12: -1.1438 S13: 0.0471 REMARK 3 S21: 0.6464 S22: -0.2602 S23: 1.5369 REMARK 3 S31: 0.1117 S32: -1.5832 S33: 0.2741 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: ( CHAIN C AND RESID 835:862 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.014 48.356 1.100 REMARK 3 T TENSOR REMARK 3 T11: 0.4582 T22: 0.6860 REMARK 3 T33: 0.6616 T12: 0.0061 REMARK 3 T13: -0.0785 T23: -0.1206 REMARK 3 L TENSOR REMARK 3 L11: 4.0669 L22: 7.1057 REMARK 3 L33: 9.4556 L12: 0.4836 REMARK 3 L13: -1.5336 L23: 4.8903 REMARK 3 S TENSOR REMARK 3 S11: -0.2958 S12: 0.6263 S13: -0.2252 REMARK 3 S21: -0.6907 S22: -1.0902 S23: 0.6437 REMARK 3 S31: -1.8405 S32: -0.9910 S33: 0.7784 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: ( CHAIN C AND RESID 863:874 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.132 42.125 23.228 REMARK 3 T TENSOR REMARK 3 T11: 0.6315 T22: 0.4163 REMARK 3 T33: 0.3790 T12: 0.0774 REMARK 3 T13: -0.0082 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 3.6376 L22: 3.4331 REMARK 3 L33: 4.2090 L12: -3.0992 REMARK 3 L13: 0.7945 L23: -2.2210 REMARK 3 S TENSOR REMARK 3 S11: 0.1003 S12: -0.4761 S13: -0.2822 REMARK 3 S21: 0.8397 S22: 0.0321 S23: 0.6965 REMARK 3 S31: 0.7572 S32: -0.1297 S33: -0.1747 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: ( CHAIN C AND RESID 875:897 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.758 51.941 26.063 REMARK 3 T TENSOR REMARK 3 T11: 0.4283 T22: 0.4446 REMARK 3 T33: 0.8556 T12: -0.0413 REMARK 3 T13: 0.0587 T23: 0.0660 REMARK 3 L TENSOR REMARK 3 L11: 8.9744 L22: 3.3899 REMARK 3 L33: 6.1343 L12: -5.5897 REMARK 3 L13: -2.1067 L23: 1.2075 REMARK 3 S TENSOR REMARK 3 S11: -0.4138 S12: 0.2048 S13: 0.1242 REMARK 3 S21: 0.4065 S22: 0.4943 S23: 1.5171 REMARK 3 S31: 0.1828 S32: -0.6010 S33: -0.2043 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: ( CHAIN D AND RESID 725:727 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.040 31.392 -51.773 REMARK 3 T TENSOR REMARK 3 T11: 0.8463 T22: 0.7868 REMARK 3 T33: 1.2124 T12: -0.2307 REMARK 3 T13: -0.1642 T23: 0.2743 REMARK 3 L TENSOR REMARK 3 L11: 6.2715 L22: 5.2157 REMARK 3 L33: 5.3075 L12: 1.6137 REMARK 3 L13: -5.3697 L23: 0.0635 REMARK 3 S TENSOR REMARK 3 S11: -0.1133 S12: 0.2700 S13: 1.1281 REMARK 3 S21: 0.8067 S22: 0.8188 S23: -1.1563 REMARK 3 S31: -1.2582 S32: -0.8488 S33: -0.2943 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: ( CHAIN D AND RESID 728:839 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.186 24.012 -52.726 REMARK 3 T TENSOR REMARK 3 T11: 0.5050 T22: 0.4010 REMARK 3 T33: 0.6914 T12: -0.0907 REMARK 3 T13: -0.1649 T23: 0.0558 REMARK 3 L TENSOR REMARK 3 L11: 4.8115 L22: 6.3906 REMARK 3 L33: 4.0416 L12: -2.0674 REMARK 3 L13: 0.2645 L23: -0.3044 REMARK 3 S TENSOR REMARK 3 S11: -0.3167 S12: 0.3463 S13: 1.1179 REMARK 3 S21: 0.1026 S22: 0.0765 S23: -0.8517 REMARK 3 S31: -0.6715 S32: -0.2006 S33: 0.1535 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: ( CHAIN D AND RESID 840:897 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.238 -14.292 -86.666 REMARK 3 T TENSOR REMARK 3 T11: 0.6308 T22: 0.2469 REMARK 3 T33: 0.4069 T12: 0.0097 REMARK 3 T13: 0.1384 T23: -0.0403 REMARK 3 L TENSOR REMARK 3 L11: 4.3509 L22: 7.1126 REMARK 3 L33: 3.9471 L12: 2.2147 REMARK 3 L13: -0.7170 L23: 1.0602 REMARK 3 S TENSOR REMARK 3 S11: -0.5932 S12: 0.0533 S13: -0.5734 REMARK 3 S21: -1.2066 S22: 0.2510 S23: -0.2183 REMARK 3 S31: 0.4668 S32: 0.1929 S33: 0.2465 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7LMM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1000252734. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JAN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18810 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.790 REMARK 200 RESOLUTION RANGE LOW (A) : 34.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 12.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4WXX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES (PH 6.5) ,13% PEG1500, 20 MM REMARK 280 DTT AND 200 MM L-PROLINE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.14050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.21200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.14050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.21200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 724 REMARK 465 SER C 724 REMARK 465 SER D 724 REMARK 465 GLY F 14 REMARK 465 ALA F 15 REMARK 465 LYS F 16 REMARK 465 ARG F 17 REMARK 465 TYR F 26 REMARK 465 GLY G 14 REMARK 465 ALA G 15 REMARK 465 TYR G 26 REMARK 465 GLY I 14 REMARK 465 ALA I 15 REMARK 465 LYS I 16 REMARK 465 TYR I 26 REMARK 465 GLY H 14 REMARK 465 ALA H 15 REMARK 465 LYS H 16 REMARK 465 TYR H 26 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 724 OG REMARK 470 LYS A 725 CG CD CE NZ REMARK 470 ARG A 727 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 750 CG OD1 OD2 REMARK 470 SER A 751 OG REMARK 470 LYS A 769 CG CD CE NZ REMARK 470 SER A 806 OG REMARK 470 SER A 841 OG REMARK 470 LYS A 878 CG CD CE NZ REMARK 470 LYS A 886 CE NZ REMARK 470 LYS A 888 NZ REMARK 470 LYS B 725 CD CE NZ REMARK 470 ASN B 726 CG OD1 ND2 REMARK 470 ARG B 727 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 736 CE NZ REMARK 470 LYS B 740 CD CE NZ REMARK 470 SER B 751 OG REMARK 470 LYS B 769 CD CE NZ REMARK 470 SER B 806 OG REMARK 470 LYS B 878 CE NZ REMARK 470 LYS C 725 CG CD CE NZ REMARK 470 ASN C 726 CG OD1 ND2 REMARK 470 LYS C 740 CG CD CE NZ REMARK 470 LYS C 745 CG CD CE NZ REMARK 470 LYS C 746 CG CD CE NZ REMARK 470 SER C 751 OG REMARK 470 SER C 806 OG REMARK 470 SER C 841 OG REMARK 470 LYS C 878 CG CD CE NZ REMARK 470 LYS D 725 CG CD CE NZ REMARK 470 ASN D 726 CG OD1 ND2 REMARK 470 ARG D 727 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 736 CG CD CE NZ REMARK 470 LYS D 740 CG CD CE NZ REMARK 470 LYS D 741 CG CD CE NZ REMARK 470 SER D 751 OG REMARK 470 LYS D 769 CE NZ REMARK 470 SER D 784 OG REMARK 470 SER D 841 OG REMARK 470 LYS D 878 CG CD CE NZ REMARK 470 ASN F 25 CG OD1 ND2 REMARK 470 LYS G 16 CG CD CE NZ REMARK 470 ARG G 17 CG CD NE CZ NH1 NH2 REMARK 470 ASN G 25 CG OD1 ND2 REMARK 470 ARG I 17 CG CD NE CZ NH1 NH2 REMARK 470 ASP I 24 CG OD1 OD2 REMARK 470 ARG H 17 CG CD NE CZ NH1 NH2 REMARK 470 ASN H 25 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE A 763 NH1 ARG F 23 2.03 REMARK 500 O GLY B 739 O HOH B 1001 2.14 REMARK 500 O ILE C 763 NH2 ARG I 23 2.17 REMARK 500 O HOH A 1009 O HOH A 1016 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 817 CB CYS A 817 SG -0.136 REMARK 500 CYS C 817 CB CYS C 817 SG -0.107 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 872 NE - CZ - NH1 ANGL. DEV. = -9.8 DEGREES REMARK 500 ARG B 872 NE - CZ - NH2 ANGL. DEV. = 6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 740 -34.46 -139.21 REMARK 500 ASP A 750 -127.31 58.06 REMARK 500 ALA A 804 -176.68 -62.84 REMARK 500 GLU A 818 130.36 -178.77 REMARK 500 GLN A 863 -30.31 -134.45 REMARK 500 LYS A 878 50.67 -109.01 REMARK 500 ASN B 726 -135.09 48.54 REMARK 500 ASP B 750 -132.27 61.85 REMARK 500 TYR B 887 0.44 -67.35 REMARK 500 LYS B 888 -1.87 -148.09 REMARK 500 ASP C 750 -120.53 62.89 REMARK 500 GLU C 818 132.66 -177.59 REMARK 500 ASP D 750 -127.43 63.38 REMARK 500 ASP D 758 170.37 -59.99 REMARK 500 ASP D 766 90.72 -64.13 REMARK 500 GLU D 818 139.26 178.50 REMARK 500 HIS H 18 71.54 51.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 MLY F 20 -14.02 REMARK 500 MLY G 20 17.18 REMARK 500 MLY I 20 12.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 790 NE2 REMARK 620 2 CYS A 817 SG 102.6 REMARK 620 3 CYS A 890 SG 95.1 57.6 REMARK 620 4 CYS A 893 SG 95.0 56.5 1.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 790 NE2 REMARK 620 2 CYS B 817 SG 108.4 REMARK 620 3 CYS B 890 SG 93.9 67.1 REMARK 620 4 CYS B 893 SG 93.5 66.7 0.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 790 NE2 REMARK 620 2 CYS C 817 SG 121.1 REMARK 620 3 CYS C 890 SG 90.5 74.0 REMARK 620 4 CYS C 893 SG 90.1 73.6 0.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 790 NE2 REMARK 620 2 CYS D 817 SG 132.9 REMARK 620 3 CYS D 890 SG 108.2 69.0 REMARK 620 4 CYS D 893 SG 108.5 68.0 1.1 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7LMK RELATED DB: PDB REMARK 900 7LMK CONTAINS THE SAME PROTEIN COMPLEXED WITH H4K20ME3 DBREF 7LMM A 725 837 UNP Q24K09 DNMT1_BOVIN 725 837 DBREF 7LMM A 859 897 UNP Q24K09 DNMT1_BOVIN 859 897 DBREF 7LMM B 725 837 UNP Q24K09 DNMT1_BOVIN 725 837 DBREF 7LMM B 859 897 UNP Q24K09 DNMT1_BOVIN 859 897 DBREF 7LMM C 725 837 UNP Q24K09 DNMT1_BOVIN 725 837 DBREF 7LMM C 859 897 UNP Q24K09 DNMT1_BOVIN 859 897 DBREF 7LMM D 725 837 UNP Q24K09 DNMT1_BOVIN 725 837 DBREF 7LMM D 859 897 UNP Q24K09 DNMT1_BOVIN 859 897 DBREF 7LMM F 14 26 UNP P62805 H4_HUMAN 15 27 DBREF 7LMM G 14 26 UNP P62805 H4_HUMAN 15 27 DBREF 7LMM I 14 26 UNP P62805 H4_HUMAN 15 27 DBREF 7LMM H 14 26 UNP P62805 H4_HUMAN 15 27 SEQADV 7LMM SER A 724 UNP Q24K09 EXPRESSION TAG SEQADV 7LMM GLY A 838 UNP Q24K09 LINKER SEQADV 7LMM ALA A 839 UNP Q24K09 LINKER SEQADV 7LMM GLY A 840 UNP Q24K09 LINKER SEQADV 7LMM SER A 841 UNP Q24K09 LINKER SEQADV 7LMM ALA A 842 UNP Q24K09 LINKER SEQADV 7LMM SER B 724 UNP Q24K09 EXPRESSION TAG SEQADV 7LMM GLY B 838 UNP Q24K09 LINKER SEQADV 7LMM ALA B 839 UNP Q24K09 LINKER SEQADV 7LMM GLY B 840 UNP Q24K09 LINKER SEQADV 7LMM SER B 841 UNP Q24K09 LINKER SEQADV 7LMM ALA B 842 UNP Q24K09 LINKER SEQADV 7LMM SER C 724 UNP Q24K09 EXPRESSION TAG SEQADV 7LMM GLY C 838 UNP Q24K09 LINKER SEQADV 7LMM ALA C 839 UNP Q24K09 LINKER SEQADV 7LMM GLY C 840 UNP Q24K09 LINKER SEQADV 7LMM SER C 841 UNP Q24K09 LINKER SEQADV 7LMM ALA C 842 UNP Q24K09 LINKER SEQADV 7LMM SER D 724 UNP Q24K09 EXPRESSION TAG SEQADV 7LMM GLY D 838 UNP Q24K09 LINKER SEQADV 7LMM ALA D 839 UNP Q24K09 LINKER SEQADV 7LMM GLY D 840 UNP Q24K09 LINKER SEQADV 7LMM SER D 841 UNP Q24K09 LINKER SEQADV 7LMM ALA D 842 UNP Q24K09 LINKER SEQADV 7LMM TYR F 26 UNP P62805 ILE 27 CONFLICT SEQADV 7LMM TYR G 26 UNP P62805 ILE 27 CONFLICT SEQADV 7LMM TYR I 26 UNP P62805 ILE 27 CONFLICT SEQADV 7LMM TYR H 26 UNP P62805 ILE 27 CONFLICT SEQRES 1 A 158 SER LYS ASN ARG ILE SER TRP VAL GLY ASP ALA VAL LYS SEQRES 2 A 158 THR ASP GLY LYS LYS SER TYR TYR LYS LYS VAL CYS ILE SEQRES 3 A 158 ASP SER GLU THR LEU GLU VAL GLY ASP CYS VAL SER VAL SEQRES 4 A 158 ILE PRO ASP ASP SER SER LYS PRO LEU TYR LEU ALA ARG SEQRES 5 A 158 VAL THR ALA LEU TRP GLU ASP SER SER ASN GLY GLN MET SEQRES 6 A 158 PHE HIS ALA HIS TRP PHE CYS ALA GLY THR ASP THR VAL SEQRES 7 A 158 LEU GLY ALA THR SER ASP PRO LEU GLU LEU PHE LEU VAL SEQRES 8 A 158 ASP GLU CYS GLU ASP MET GLN LEU SER TYR ILE HIS SER SEQRES 9 A 158 LYS VAL GLN VAL ILE TYR LYS ALA PRO SER GLY ALA GLY SEQRES 10 A 158 SER ALA THR TYR PHE TYR GLN LEU TRP TYR ASP GLN ASP SEQRES 11 A 158 TYR ALA ARG PHE GLU SER PRO PRO LYS THR GLN PRO THR SEQRES 12 A 158 GLU ASP ASN LYS TYR LYS PHE CYS ALA SER CYS ALA ARG SEQRES 13 A 158 LEU ALA SEQRES 1 B 158 SER LYS ASN ARG ILE SER TRP VAL GLY ASP ALA VAL LYS SEQRES 2 B 158 THR ASP GLY LYS LYS SER TYR TYR LYS LYS VAL CYS ILE SEQRES 3 B 158 ASP SER GLU THR LEU GLU VAL GLY ASP CYS VAL SER VAL SEQRES 4 B 158 ILE PRO ASP ASP SER SER LYS PRO LEU TYR LEU ALA ARG SEQRES 5 B 158 VAL THR ALA LEU TRP GLU ASP SER SER ASN GLY GLN MET SEQRES 6 B 158 PHE HIS ALA HIS TRP PHE CYS ALA GLY THR ASP THR VAL SEQRES 7 B 158 LEU GLY ALA THR SER ASP PRO LEU GLU LEU PHE LEU VAL SEQRES 8 B 158 ASP GLU CYS GLU ASP MET GLN LEU SER TYR ILE HIS SER SEQRES 9 B 158 LYS VAL GLN VAL ILE TYR LYS ALA PRO SER GLY ALA GLY SEQRES 10 B 158 SER ALA THR TYR PHE TYR GLN LEU TRP TYR ASP GLN ASP SEQRES 11 B 158 TYR ALA ARG PHE GLU SER PRO PRO LYS THR GLN PRO THR SEQRES 12 B 158 GLU ASP ASN LYS TYR LYS PHE CYS ALA SER CYS ALA ARG SEQRES 13 B 158 LEU ALA SEQRES 1 C 158 SER LYS ASN ARG ILE SER TRP VAL GLY ASP ALA VAL LYS SEQRES 2 C 158 THR ASP GLY LYS LYS SER TYR TYR LYS LYS VAL CYS ILE SEQRES 3 C 158 ASP SER GLU THR LEU GLU VAL GLY ASP CYS VAL SER VAL SEQRES 4 C 158 ILE PRO ASP ASP SER SER LYS PRO LEU TYR LEU ALA ARG SEQRES 5 C 158 VAL THR ALA LEU TRP GLU ASP SER SER ASN GLY GLN MET SEQRES 6 C 158 PHE HIS ALA HIS TRP PHE CYS ALA GLY THR ASP THR VAL SEQRES 7 C 158 LEU GLY ALA THR SER ASP PRO LEU GLU LEU PHE LEU VAL SEQRES 8 C 158 ASP GLU CYS GLU ASP MET GLN LEU SER TYR ILE HIS SER SEQRES 9 C 158 LYS VAL GLN VAL ILE TYR LYS ALA PRO SER GLY ALA GLY SEQRES 10 C 158 SER ALA THR TYR PHE TYR GLN LEU TRP TYR ASP GLN ASP SEQRES 11 C 158 TYR ALA ARG PHE GLU SER PRO PRO LYS THR GLN PRO THR SEQRES 12 C 158 GLU ASP ASN LYS TYR LYS PHE CYS ALA SER CYS ALA ARG SEQRES 13 C 158 LEU ALA SEQRES 1 D 158 SER LYS ASN ARG ILE SER TRP VAL GLY ASP ALA VAL LYS SEQRES 2 D 158 THR ASP GLY LYS LYS SER TYR TYR LYS LYS VAL CYS ILE SEQRES 3 D 158 ASP SER GLU THR LEU GLU VAL GLY ASP CYS VAL SER VAL SEQRES 4 D 158 ILE PRO ASP ASP SER SER LYS PRO LEU TYR LEU ALA ARG SEQRES 5 D 158 VAL THR ALA LEU TRP GLU ASP SER SER ASN GLY GLN MET SEQRES 6 D 158 PHE HIS ALA HIS TRP PHE CYS ALA GLY THR ASP THR VAL SEQRES 7 D 158 LEU GLY ALA THR SER ASP PRO LEU GLU LEU PHE LEU VAL SEQRES 8 D 158 ASP GLU CYS GLU ASP MET GLN LEU SER TYR ILE HIS SER SEQRES 9 D 158 LYS VAL GLN VAL ILE TYR LYS ALA PRO SER GLY ALA GLY SEQRES 10 D 158 SER ALA THR TYR PHE TYR GLN LEU TRP TYR ASP GLN ASP SEQRES 11 D 158 TYR ALA ARG PHE GLU SER PRO PRO LYS THR GLN PRO THR SEQRES 12 D 158 GLU ASP ASN LYS TYR LYS PHE CYS ALA SER CYS ALA ARG SEQRES 13 D 158 LEU ALA SEQRES 1 F 13 GLY ALA LYS ARG HIS ARG MLY VAL LEU ARG ASP ASN TYR SEQRES 1 G 13 GLY ALA LYS ARG HIS ARG MLY VAL LEU ARG ASP ASN TYR SEQRES 1 I 13 GLY ALA LYS ARG HIS ARG MLY VAL LEU ARG ASP ASN TYR SEQRES 1 H 13 GLY ALA LYS ARG HIS ARG MLY VAL LEU ARG ASP ASN TYR MODRES 7LMM MLY F 20 LYS MODIFIED RESIDUE MODRES 7LMM MLY G 20 LYS MODIFIED RESIDUE MODRES 7LMM MLY I 20 LYS MODIFIED RESIDUE MODRES 7LMM MLY H 20 LYS MODIFIED RESIDUE HET MLY F 20 11 HET MLY G 20 11 HET MLY I 20 11 HET MLY H 20 11 HET ZN A 901 1 HET ZN B 901 1 HET ZN C 901 1 HET ZN D 901 1 HETNAM MLY N-DIMETHYL-LYSINE HETNAM ZN ZINC ION FORMUL 5 MLY 4(C8 H18 N2 O2) FORMUL 9 ZN 4(ZN 2+) FORMUL 13 HOH *36(H2 O) HELIX 1 AA1 ALA A 796 THR A 800 5 5 HELIX 2 AA2 SER A 823 ILE A 825 5 3 HELIX 3 AA3 ASN A 885 PHE A 889 5 5 HELIX 4 AA4 CYS A 890 LEU A 896 1 7 HELIX 5 AA5 ALA B 796 THR B 800 5 5 HELIX 6 AA6 ASN B 885 PHE B 889 5 5 HELIX 7 AA7 CYS B 890 ALA B 897 1 8 HELIX 8 AA8 ALA C 796 THR C 800 5 5 HELIX 9 AA9 ASN C 885 PHE C 889 5 5 HELIX 10 AB1 CYS C 890 ALA C 897 1 8 HELIX 11 AB2 ALA D 796 THR D 800 5 5 HELIX 12 AB3 ASN D 885 PHE D 889 5 5 HELIX 13 AB4 CYS D 890 ALA D 897 1 8 SHEET 1 AA1 3 ILE A 728 VAL A 731 0 SHEET 2 AA1 3 LYS A 746 ILE A 749 -1 O CYS A 748 N SER A 729 SHEET 3 AA1 3 GLU A 752 GLU A 755 -1 O GLU A 752 N ILE A 749 SHEET 1 AA2 5 LYS A 736 THR A 737 0 SHEET 2 AA2 5 LYS A 741 TYR A 744 -1 O TYR A 743 N LYS A 736 SHEET 3 AA2 5 TYR A 772 ASP A 782 -1 O LEU A 779 N TYR A 744 SHEET 4 AA2 5 GLY A 786 CYS A 795 -1 O GLY A 786 N ASP A 782 SHEET 5 AA2 5 PHE A 812 GLN A 821 -1 O GLU A 818 N ALA A 791 SHEET 1 AA3 5 LYS A 736 THR A 737 0 SHEET 2 AA3 5 LYS A 741 TYR A 744 -1 O TYR A 743 N LYS A 736 SHEET 3 AA3 5 TYR A 772 ASP A 782 -1 O LEU A 779 N TYR A 744 SHEET 4 AA3 5 CYS A 759 VAL A 762 -1 N VAL A 762 O TYR A 772 SHEET 5 AA3 5 SER A 827 VAL A 829 -1 O SER A 827 N SER A 761 SHEET 1 AA4 2 TRP A 865 ASP A 867 0 SHEET 2 AA4 2 ARG A 872 GLU A 874 -1 O GLU A 874 N TRP A 865 SHEET 1 AA5 3 ILE B 728 VAL B 731 0 SHEET 2 AA5 3 LYS B 746 ILE B 749 -1 O CYS B 748 N SER B 729 SHEET 3 AA5 3 GLU B 752 GLU B 755 -1 O LEU B 754 N VAL B 747 SHEET 1 AA6 5 LYS B 736 ASP B 738 0 SHEET 2 AA6 5 LYS B 741 TYR B 744 -1 O LYS B 741 N ASP B 738 SHEET 3 AA6 5 TYR B 772 ASP B 782 -1 O GLU B 781 N SER B 742 SHEET 4 AA6 5 GLY B 786 CYS B 795 -1 O GLY B 786 N ASP B 782 SHEET 5 AA6 5 PHE B 812 GLN B 821 -1 O MET B 820 N PHE B 789 SHEET 1 AA7 5 LYS B 736 ASP B 738 0 SHEET 2 AA7 5 LYS B 741 TYR B 744 -1 O LYS B 741 N ASP B 738 SHEET 3 AA7 5 TYR B 772 ASP B 782 -1 O GLU B 781 N SER B 742 SHEET 4 AA7 5 CYS B 759 VAL B 762 -1 N VAL B 760 O ALA B 774 SHEET 5 AA7 5 ILE B 825 VAL B 829 -1 O HIS B 826 N SER B 761 SHEET 1 AA8 2 TRP B 865 ASP B 867 0 SHEET 2 AA8 2 ARG B 872 GLU B 874 -1 O ARG B 872 N ASP B 867 SHEET 1 AA9 3 ILE C 728 VAL C 731 0 SHEET 2 AA9 3 LYS C 746 ILE C 749 -1 O CYS C 748 N SER C 729 SHEET 3 AA9 3 GLU C 752 GLU C 755 -1 O LEU C 754 N VAL C 747 SHEET 1 AB1 5 LYS C 736 ASP C 738 0 SHEET 2 AB1 5 LYS C 741 TYR C 743 -1 O TYR C 743 N LYS C 736 SHEET 3 AB1 5 TYR C 772 GLU C 781 -1 O GLU C 781 N SER C 742 SHEET 4 AB1 5 GLN C 787 CYS C 795 -1 O MET C 788 N TRP C 780 SHEET 5 AB1 5 PHE C 812 GLN C 821 -1 O MET C 820 N PHE C 789 SHEET 1 AB2 5 LYS C 736 ASP C 738 0 SHEET 2 AB2 5 LYS C 741 TYR C 743 -1 O TYR C 743 N LYS C 736 SHEET 3 AB2 5 TYR C 772 GLU C 781 -1 O GLU C 781 N SER C 742 SHEET 4 AB2 5 CYS C 759 VAL C 762 -1 N VAL C 760 O ALA C 774 SHEET 5 AB2 5 ILE C 825 VAL C 829 -1 O HIS C 826 N SER C 761 SHEET 1 AB3 2 TRP C 865 ASP C 867 0 SHEET 2 AB3 2 ARG C 872 GLU C 874 -1 O ARG C 872 N ASP C 867 SHEET 1 AB4 3 ILE D 728 VAL D 731 0 SHEET 2 AB4 3 LYS D 746 ILE D 749 -1 O CYS D 748 N SER D 729 SHEET 3 AB4 3 GLU D 752 GLU D 755 -1 O LEU D 754 N VAL D 747 SHEET 1 AB5 5 LYS D 736 THR D 737 0 SHEET 2 AB5 5 LYS D 741 TYR D 744 -1 O TYR D 743 N LYS D 736 SHEET 3 AB5 5 TYR D 772 ASP D 782 -1 O LEU D 779 N TYR D 744 SHEET 4 AB5 5 GLY D 786 CYS D 795 -1 O MET D 788 N TRP D 780 SHEET 5 AB5 5 PHE D 812 GLN D 821 -1 O GLU D 816 N TRP D 793 SHEET 1 AB6 5 LYS D 736 THR D 737 0 SHEET 2 AB6 5 LYS D 741 TYR D 744 -1 O TYR D 743 N LYS D 736 SHEET 3 AB6 5 TYR D 772 ASP D 782 -1 O LEU D 779 N TYR D 744 SHEET 4 AB6 5 CYS D 759 VAL D 762 -1 N VAL D 762 O TYR D 772 SHEET 5 AB6 5 ILE D 825 VAL D 829 -1 O HIS D 826 N SER D 761 SHEET 1 AB7 2 TRP D 865 ASP D 867 0 SHEET 2 AB7 2 ARG D 872 GLU D 874 -1 O ARG D 872 N ASP D 867 LINK C ARG F 19 N MLY F 20 1555 1555 1.33 LINK C MLY F 20 N VAL F 21 1555 1555 1.33 LINK C ARG G 19 N MLY G 20 1555 1555 1.33 LINK C MLY G 20 N VAL G 21 1555 1555 1.33 LINK C ARG I 19 N MLY I 20 1555 1555 1.32 LINK C MLY I 20 N VAL I 21 1555 1555 1.33 LINK C ARG H 19 N MLY H 20 1555 1555 1.33 LINK C MLY H 20 N VAL H 21 1555 1555 1.32 LINK NE2 HIS A 790 ZN ZN A 901 1555 1555 2.07 LINK SG CYS A 817 ZN ZN A 901 1555 1555 2.25 LINK SG CYS A 890 ZN ZN A 901 1555 2565 2.27 LINK SG CYS A 893 ZN ZN A 901 1555 2565 2.24 LINK NE2 HIS B 790 ZN ZN B 901 1555 1555 2.06 LINK SG CYS B 817 ZN ZN B 901 1555 1555 2.25 LINK SG CYS B 890 ZN ZN B 901 1555 2554 2.35 LINK SG CYS B 893 ZN ZN B 901 1555 2554 2.25 LINK NE2 HIS C 790 ZN ZN C 901 1555 1555 2.09 LINK SG CYS C 817 ZN ZN C 901 1555 1555 2.32 LINK SG CYS C 890 ZN ZN C 901 1555 2565 2.32 LINK SG CYS C 893 ZN ZN C 901 1555 2565 2.31 LINK NE2 HIS D 790 ZN ZN D 901 1555 1555 2.04 LINK SG CYS D 817 ZN ZN D 901 1555 1555 2.02 LINK SG CYS D 890 ZN ZN D 901 1555 2554 2.46 LINK SG CYS D 893 ZN ZN D 901 1555 2554 2.27 CRYST1 70.696 80.281 130.424 90.00 90.00 90.00 P 2 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014145 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012456 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007667 0.00000