HEADER GENE REGULATION/INHIBITOR 11-FEB-21 7LP0 TITLE CRYSTAL STRUCTURE OF BPTF BROMODOMAIN IN COMPLEX WITH INHIBITOR PDY-3- TITLE 2 077 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BPTF BROMODOMAIN (UNIPROT RESIDUES 2917-3037); COMPND 5 SYNONYM: BROMODOMAIN AND PHD FINGER-CONTAINING TRANSCRIPTION FACTOR, COMPND 6 FETAL ALZ-50 CLONE 1 PROTEIN,FETAL ALZHEIMER ANTIGEN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BPTF, FAC1, FALZ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS BPTF, BROMODOMAIN, INHIBITOR, GENE REGULATION, GENE REGULATION- KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.CHAN,E.SCHONBRUNN REVDAT 3 21-FEB-24 7LP0 1 JRNL REVDAT 2 18-OCT-23 7LP0 1 REMARK REVDAT 1 10-AUG-22 7LP0 0 JRNL AUTH H.ZAHID,C.R.BUCHHOLZ,M.SINGH,M.F.CICCONE,A.CHAN, JRNL AUTH 2 S.NITHIANANTHAM,K.SHI,H.AIHARA,M.FISCHER,E.SCHONBRUNN, JRNL AUTH 3 C.O.DOS SANTOS,J.W.LANDRY,W.C.K.POMERANTZ JRNL TITL NEW DESIGN RULES FOR DEVELOPING POTENT CELL-ACTIVE JRNL TITL 2 INHIBITORS OF THE NUCLEOSOME REMODELING FACTOR (NURF) VIA JRNL TITL 3 BPTF BROMODOMAIN INHIBITION. JRNL REF J.MED.CHEM. V. 64 13902 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 34515477 JRNL DOI 10.1021/ACS.JMEDCHEM.1C01294 REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.020 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 25200 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.760 REMARK 3 FREE R VALUE TEST SET COUNT : 1200 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.0500 - 3.4500 0.96 2703 136 0.1612 0.1951 REMARK 3 2 3.4500 - 2.7400 0.97 2719 136 0.1756 0.2147 REMARK 3 3 2.7400 - 2.3900 0.97 2737 136 0.1752 0.2231 REMARK 3 4 2.3900 - 2.1800 0.96 2724 137 0.1728 0.2321 REMARK 3 5 2.1700 - 2.0200 0.94 2646 132 0.1953 0.2425 REMARK 3 6 2.0200 - 1.9000 0.94 2664 133 0.2670 0.3065 REMARK 3 7 1.9000 - 1.8100 0.94 2599 130 0.2773 0.3444 REMARK 3 8 1.8100 - 1.7300 0.92 2593 129 0.3057 0.3268 REMARK 3 9 1.7300 - 1.6600 0.92 2615 131 0.3331 0.4173 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2925 THROUGH 2945 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.2861 20.7346 -8.5116 REMARK 3 T TENSOR REMARK 3 T11: 0.1753 T22: 0.1868 REMARK 3 T33: 0.1858 T12: -0.0309 REMARK 3 T13: 0.0006 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 4.8587 L22: 9.2480 REMARK 3 L33: 2.6511 L12: -3.8367 REMARK 3 L13: -1.2114 L23: 1.7477 REMARK 3 S TENSOR REMARK 3 S11: 0.1821 S12: 0.1024 S13: 0.3700 REMARK 3 S21: -0.6308 S22: -0.0354 S23: -0.2758 REMARK 3 S31: -0.3064 S32: 0.1747 S33: -0.1674 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2946 THROUGH 2963 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0444 1.3769 0.7713 REMARK 3 T TENSOR REMARK 3 T11: 0.1947 T22: 0.1694 REMARK 3 T33: 0.2152 T12: -0.0361 REMARK 3 T13: 0.0014 T23: -0.0148 REMARK 3 L TENSOR REMARK 3 L11: 3.3493 L22: 6.5715 REMARK 3 L33: 6.2607 L12: 2.0843 REMARK 3 L13: -4.1409 L23: -2.0129 REMARK 3 S TENSOR REMARK 3 S11: -0.0886 S12: 0.2171 S13: -0.4289 REMARK 3 S21: 0.1509 S22: 0.0738 S23: 0.3429 REMARK 3 S31: 0.4730 S32: -0.3102 S33: 0.1147 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2964 THROUGH 2973 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.4976 8.4890 6.8761 REMARK 3 T TENSOR REMARK 3 T11: 0.1629 T22: 0.2828 REMARK 3 T33: 0.1880 T12: 0.0208 REMARK 3 T13: 0.0194 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 8.8673 L22: 5.2000 REMARK 3 L33: 6.2218 L12: 6.7451 REMARK 3 L13: -7.1282 L23: -5.6454 REMARK 3 S TENSOR REMARK 3 S11: 0.1325 S12: 0.1030 S13: 0.5437 REMARK 3 S21: 0.1967 S22: 0.2684 S23: 0.4949 REMARK 3 S31: -0.5503 S32: -0.9489 S33: -0.3733 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2974 THROUGH 2982 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0598 14.9355 -6.4948 REMARK 3 T TENSOR REMARK 3 T11: 0.1883 T22: 0.1855 REMARK 3 T33: 0.1649 T12: -0.0097 REMARK 3 T13: -0.0135 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 2.4077 L22: 4.3920 REMARK 3 L33: 4.4830 L12: -3.2383 REMARK 3 L13: 3.2577 L23: -4.4248 REMARK 3 S TENSOR REMARK 3 S11: 0.1353 S12: 0.1579 S13: -0.0885 REMARK 3 S21: -0.0528 S22: -0.1013 S23: 0.3051 REMARK 3 S31: 0.1686 S32: 0.1470 S33: -0.0119 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2983 THROUGH 2988 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.5950 23.4104 -5.4673 REMARK 3 T TENSOR REMARK 3 T11: 0.1954 T22: 0.1665 REMARK 3 T33: 0.2092 T12: 0.0511 REMARK 3 T13: -0.0049 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 6.8613 L22: 6.9077 REMARK 3 L33: 5.1278 L12: 1.9769 REMARK 3 L13: 2.0312 L23: -3.0387 REMARK 3 S TENSOR REMARK 3 S11: 0.2239 S12: 0.3910 S13: -0.1262 REMARK 3 S21: -0.2943 S22: 0.0528 S23: -0.1569 REMARK 3 S31: 0.1341 S32: -0.1099 S33: -0.1640 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2989 THROUGH 3006 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.4413 13.6797 6.0743 REMARK 3 T TENSOR REMARK 3 T11: 0.1105 T22: 0.1632 REMARK 3 T33: 0.1111 T12: -0.0053 REMARK 3 T13: -0.0166 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 3.6980 L22: 6.0847 REMARK 3 L33: 4.4228 L12: 2.8710 REMARK 3 L13: -2.4819 L23: -2.2372 REMARK 3 S TENSOR REMARK 3 S11: -0.0161 S12: -0.1373 S13: 0.1052 REMARK 3 S21: 0.0456 S22: -0.0728 S23: -0.0896 REMARK 3 S31: -0.1004 S32: 0.0790 S33: 0.0726 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3007 THROUGH 3035 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.2401 10.6948 3.5591 REMARK 3 T TENSOR REMARK 3 T11: 0.1257 T22: 0.1939 REMARK 3 T33: 0.1332 T12: 0.0337 REMARK 3 T13: -0.0325 T23: -0.0261 REMARK 3 L TENSOR REMARK 3 L11: 7.2088 L22: 7.8374 REMARK 3 L33: 5.0373 L12: 5.2567 REMARK 3 L13: -4.3260 L23: -4.8699 REMARK 3 S TENSOR REMARK 3 S11: 0.0047 S12: -0.2515 S13: -0.1950 REMARK 3 S21: 0.2058 S22: -0.1100 S23: -0.2409 REMARK 3 S31: -0.0326 S32: 0.2742 S33: 0.1525 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2921 THROUGH 2952 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0994 11.1004 -20.2902 REMARK 3 T TENSOR REMARK 3 T11: 0.1400 T22: 0.1900 REMARK 3 T33: 0.1580 T12: 0.0019 REMARK 3 T13: 0.0144 T23: -0.0365 REMARK 3 L TENSOR REMARK 3 L11: 2.8548 L22: 3.9763 REMARK 3 L33: 4.6598 L12: 0.3052 REMARK 3 L13: 1.1185 L23: -0.3469 REMARK 3 S TENSOR REMARK 3 S11: -0.0479 S12: -0.0002 S13: -0.1820 REMARK 3 S21: 0.2055 S22: 0.1114 S23: -0.3203 REMARK 3 S31: 0.2780 S32: 0.2151 S33: -0.0616 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2953 THROUGH 2973 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.7124 23.0117 -30.7360 REMARK 3 T TENSOR REMARK 3 T11: 0.2033 T22: 0.3153 REMARK 3 T33: 0.2875 T12: 0.0378 REMARK 3 T13: -0.0015 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 6.0559 L22: 4.9883 REMARK 3 L33: 2.8538 L12: -1.1720 REMARK 3 L13: 3.7151 L23: -1.6294 REMARK 3 S TENSOR REMARK 3 S11: -0.4134 S12: -0.1343 S13: 0.6026 REMARK 3 S21: 0.1910 S22: 0.1344 S23: 0.4168 REMARK 3 S31: -0.2686 S32: -0.5490 S33: 0.2979 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2974 THROUGH 3006 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.2857 11.6405 -26.0403 REMARK 3 T TENSOR REMARK 3 T11: 0.1015 T22: 0.1442 REMARK 3 T33: 0.1398 T12: -0.0223 REMARK 3 T13: 0.0006 T23: -0.0129 REMARK 3 L TENSOR REMARK 3 L11: 1.6161 L22: 4.9549 REMARK 3 L33: 8.0273 L12: -0.4700 REMARK 3 L13: 1.1597 L23: -5.2180 REMARK 3 S TENSOR REMARK 3 S11: 0.0632 S12: -0.0814 S13: -0.0706 REMARK 3 S21: -0.0167 S22: -0.1084 S23: -0.0057 REMARK 3 S31: 0.1385 S32: -0.0522 S33: 0.0599 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3007 THROUGH 3035 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7072 17.0492 -29.2040 REMARK 3 T TENSOR REMARK 3 T11: 0.1293 T22: 0.2157 REMARK 3 T33: 0.1801 T12: -0.0581 REMARK 3 T13: 0.0325 T23: -0.0259 REMARK 3 L TENSOR REMARK 3 L11: 7.5275 L22: 4.5275 REMARK 3 L33: 4.6796 L12: -5.1387 REMARK 3 L13: 4.1910 L23: -2.9422 REMARK 3 S TENSOR REMARK 3 S11: 0.0606 S12: 0.0654 S13: -0.0789 REMARK 3 S21: -0.0719 S22: 0.0673 S23: 0.0405 REMARK 3 S31: 0.0535 S32: 0.2136 S33: -0.0742 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7LP0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1000254776. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03321 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE-CRYSTAL REMARK 200 SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25204 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.660 REMARK 200 RESOLUTION RANGE LOW (A) : 38.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.54000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDBID 7K6R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULFATE MONOHYDRATE, 0.1M REMARK 280 BIS-TRIS PH 6.5 AND 25% PEG 3,350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 2915 REMARK 465 MET A 2916 REMARK 465 SER A 2917 REMARK 465 THR A 2918 REMARK 465 GLU A 2919 REMARK 465 ASP A 2920 REMARK 465 ALA A 2921 REMARK 465 MET A 2922 REMARK 465 THR A 2923 REMARK 465 VAL A 2924 REMARK 465 SER A 3036 REMARK 465 HIS A 3037 REMARK 465 SER B 2915 REMARK 465 MET B 2916 REMARK 465 SER B 2917 REMARK 465 THR B 2918 REMARK 465 GLU B 2919 REMARK 465 ASP B 2920 REMARK 465 SER B 3036 REMARK 465 HIS B 3037 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A2987 CG CD OE1 OE2 REMARK 470 MET B2922 CG SD CE REMARK 470 GLU B2930 CG CD OE1 OE2 REMARK 470 LYS B2931 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 3205 O HOH B 3248 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A2961 95.69 -163.15 REMARK 500 ALA B2961 85.30 -165.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P2L A 3101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P2L B 3101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 3102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 3103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 3104 DBREF 7LP0 A 2917 3037 UNP Q12830 BPTF_HUMAN 2917 3037 DBREF 7LP0 B 2917 3037 UNP Q12830 BPTF_HUMAN 2917 3037 SEQADV 7LP0 SER A 2915 UNP Q12830 EXPRESSION TAG SEQADV 7LP0 MET A 2916 UNP Q12830 EXPRESSION TAG SEQADV 7LP0 SER B 2915 UNP Q12830 EXPRESSION TAG SEQADV 7LP0 MET B 2916 UNP Q12830 EXPRESSION TAG SEQRES 1 A 123 SER MET SER THR GLU ASP ALA MET THR VAL LEU THR PRO SEQRES 2 A 123 LEU THR GLU LYS ASP TYR GLU GLY LEU LYS ARG VAL LEU SEQRES 3 A 123 ARG SER LEU GLN ALA HIS LYS MET ALA TRP PRO PHE LEU SEQRES 4 A 123 GLU PRO VAL ASP PRO ASN ASP ALA PRO ASP TYR TYR GLY SEQRES 5 A 123 VAL ILE LYS GLU PRO MET ASP LEU ALA THR MET GLU GLU SEQRES 6 A 123 ARG VAL GLN ARG ARG TYR TYR GLU LYS LEU THR GLU PHE SEQRES 7 A 123 VAL ALA ASP MET THR LYS ILE PHE ASP ASN CYS ARG TYR SEQRES 8 A 123 TYR ASN PRO SER ASP SER PRO PHE TYR GLN CYS ALA GLU SEQRES 9 A 123 VAL LEU GLU SER PHE PHE VAL GLN LYS LEU LYS GLY PHE SEQRES 10 A 123 LYS ALA SER ARG SER HIS SEQRES 1 B 123 SER MET SER THR GLU ASP ALA MET THR VAL LEU THR PRO SEQRES 2 B 123 LEU THR GLU LYS ASP TYR GLU GLY LEU LYS ARG VAL LEU SEQRES 3 B 123 ARG SER LEU GLN ALA HIS LYS MET ALA TRP PRO PHE LEU SEQRES 4 B 123 GLU PRO VAL ASP PRO ASN ASP ALA PRO ASP TYR TYR GLY SEQRES 5 B 123 VAL ILE LYS GLU PRO MET ASP LEU ALA THR MET GLU GLU SEQRES 6 B 123 ARG VAL GLN ARG ARG TYR TYR GLU LYS LEU THR GLU PHE SEQRES 7 B 123 VAL ALA ASP MET THR LYS ILE PHE ASP ASN CYS ARG TYR SEQRES 8 B 123 TYR ASN PRO SER ASP SER PRO PHE TYR GLN CYS ALA GLU SEQRES 9 B 123 VAL LEU GLU SER PHE PHE VAL GLN LYS LEU LYS GLY PHE SEQRES 10 B 123 LYS ALA SER ARG SER HIS HET P2L A3101 17 HET P2L B3101 17 HET DMS B3102 4 HET EDO B3103 4 HET EDO B3104 4 HETNAM P2L 4-CHLOROL-2-METHYL-5-[[(3~{R})-1-METHYLPIPERIDIN-3- HETNAM 2 P2L YL]AMINO]PYRIDAZIN-3-ONE HETNAM DMS DIMETHYL SULFOXIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 P2L 2(C11 H17 CL N4 O) FORMUL 5 DMS C2 H6 O S FORMUL 6 EDO 2(C2 H6 O2) FORMUL 8 HOH *130(H2 O) HELIX 1 AA1 THR A 2929 HIS A 2946 1 18 HELIX 2 AA2 LYS A 2947 LEU A 2953 5 7 HELIX 3 AA3 ASP A 2963 ILE A 2968 1 6 HELIX 4 AA4 ASP A 2973 ARG A 2983 1 11 HELIX 5 AA5 LYS A 2988 ASN A 3007 1 20 HELIX 6 AA6 SER A 3011 ARG A 3035 1 25 HELIX 7 AA7 MET B 2922 THR B 2926 5 5 HELIX 8 AA8 THR B 2929 ALA B 2945 1 17 HELIX 9 AA9 HIS B 2946 LEU B 2953 5 8 HELIX 10 AB1 ASP B 2957 ALA B 2961 5 5 HELIX 11 AB2 ASP B 2963 ILE B 2968 1 6 HELIX 12 AB3 ASP B 2973 ARG B 2983 1 11 HELIX 13 AB4 LYS B 2988 ASN B 3007 1 20 HELIX 14 AB5 SER B 3011 ARG B 3035 1 25 SITE 1 AC1 9 PRO A2951 PHE A2952 PRO A2955 VAL A2956 SITE 2 AC1 9 ASP A2960 TYR A3006 ASN A3007 PHE A3013 SITE 3 AC1 9 HOH A3216 SITE 1 AC2 7 PRO B2951 PHE B2952 PRO B2955 TYR B3006 SITE 2 AC2 7 ASN B3007 PHE B3013 HOH B3224 SITE 1 AC3 3 SER A2942 LYS A3027 LYS B2937 SITE 1 AC4 5 LYS A2937 GLN A2982 ARG A2984 SER B2942 SITE 2 AC4 5 LYS B3027 SITE 1 AC5 3 GLY B2935 ARG B2938 SER B3034 CRYST1 27.210 38.570 57.630 97.14 103.58 94.25 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.036751 0.002731 0.009381 0.00000 SCALE2 0.000000 0.025998 0.003843 0.00000 SCALE3 0.000000 0.000000 0.018046 0.00000