HEADER TRANSFERASE/INHIBITOR 15-FEB-21 7LQU TITLE CRYSTAL STRUCTURE OF HIV-1 RT IN COMPLEX WITH NBD-14075 COMPND MOL_ID: 1; COMPND 2 MOLECULE: REVERSE TRANSCRIPTASE P66; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.49; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: REVERSE TRANSCRIPTASE P51; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1; SOURCE 3 ORGANISM_COMMON: HIV-1; SOURCE 4 ORGANISM_TAXID: 11676; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1; SOURCE 9 ORGANISM_COMMON: HIV-1; SOURCE 10 ORGANISM_TAXID: 11676; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HUMAN IMMUNODEFICIENCY VIRUS 1, NON NUCLEOTIDE-REVERSE TRANSCRIPTASE KEYWDS 2 INHIBITOR, TRANSFERASE, TRANSFERASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.LOSADA,F.X.RUIZ,K.GRUBER,K.DAS,E.ARNOLD REVDAT 3 18-OCT-23 7LQU 1 REMARK REVDAT 2 08-DEC-21 7LQU 1 JRNL REVDAT 1 17-NOV-21 7LQU 0 JRNL AUTH N.LOSADA,F.X.RUIZ,F.CURRELI,K.GRUBER,A.PILCH,K.DAS, JRNL AUTH 2 A.K.DEBNATH,E.ARNOLD JRNL TITL HIV-1 GP120 ANTAGONISTS ALSO INHIBIT HIV-1 REVERSE JRNL TITL 2 TRANSCRIPTASE BY BRIDGING THE NNRTI AND NRTI SITES. JRNL REF J.MED.CHEM. V. 64 16530 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 34735153 JRNL DOI 10.1021/ACS.JMEDCHEM.1C01104 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_3051 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 36427 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.310 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 1795 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.9000 - 6.1100 0.95 2732 152 0.2016 0.2884 REMARK 3 2 6.1100 - 4.8500 0.97 2738 143 0.2319 0.2907 REMARK 3 3 4.8500 - 4.2400 0.94 2648 128 0.2143 0.2545 REMARK 3 4 4.2400 - 3.8500 0.96 2681 138 0.2356 0.3042 REMARK 3 5 3.8500 - 3.5700 0.97 2737 131 0.2547 0.3495 REMARK 3 6 3.5700 - 3.3600 0.93 2609 132 0.2727 0.3275 REMARK 3 7 3.3600 - 3.2000 0.95 2642 149 0.2715 0.3070 REMARK 3 8 3.2000 - 3.0600 0.96 2633 142 0.3067 0.3371 REMARK 3 9 3.0600 - 2.9400 0.96 2686 145 0.3246 0.3607 REMARK 3 10 2.9400 - 2.8400 0.97 2687 129 0.3317 0.3863 REMARK 3 11 2.8400 - 2.7500 0.92 2576 119 0.3255 0.3988 REMARK 3 12 2.7500 - 2.6700 0.95 2611 160 0.3256 0.3548 REMARK 3 13 2.6700 - 2.6000 0.96 2652 127 0.3318 0.3559 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.469 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.006 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 64.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 85.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 8185 REMARK 3 ANGLE : 1.100 11127 REMARK 3 CHIRALITY : 0.060 1204 REMARK 3 PLANARITY : 0.008 1398 REMARK 3 DIHEDRAL : 17.015 3090 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 203.1259 0.5264 28.7115 REMARK 3 T TENSOR REMARK 3 T11: 0.4464 T22: 0.4674 REMARK 3 T33: 0.5500 T12: -0.0543 REMARK 3 T13: 0.0958 T23: 0.0242 REMARK 3 L TENSOR REMARK 3 L11: 1.1212 L22: 1.0704 REMARK 3 L33: 2.2701 L12: -0.6080 REMARK 3 L13: 1.2328 L23: -0.8458 REMARK 3 S TENSOR REMARK 3 S11: 0.0477 S12: -0.2028 S13: -0.1068 REMARK 3 S21: 0.3527 S22: -0.0122 S23: 0.0174 REMARK 3 S31: -0.0304 S32: -0.0671 S33: -0.0311 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7LQU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1000254816. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36440 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 47.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.06000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4G1Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 8,000, 4% PEG 400, 100 MM REMARK 280 IMIDAZOLE PH 6.6,10 MM SPERMINE, 15 MM MGSO4,100 MM (NH4)2SO4, REMARK 280 AND 5 MM TRIS(2-CARBOXYETHYL)PHOSPHINE(TCEP), VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 80.83950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.52500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 80.83950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 36.52500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 555 REMARK 465 GLY B 0 REMARK 465 PRO B 1 REMARK 465 ILE B 2 REMARK 465 SER B 3 REMARK 465 PRO B 4 REMARK 465 THR B 216 REMARK 465 PRO B 217 REMARK 465 ASP B 218 REMARK 465 LYS B 219 REMARK 465 LYS B 220 REMARK 465 HIS B 221 REMARK 465 GLN B 222 REMARK 465 LYS B 223 REMARK 465 GLU B 224 REMARK 465 PRO B 225 REMARK 465 PRO B 226 REMARK 465 PHE B 227 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 420 C - N - CA ANGL. DEV. = 9.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 17 -167.53 -76.04 REMARK 500 ASN A 54 105.87 -45.31 REMARK 500 LYS A 65 100.02 -57.92 REMARK 500 SER A 68 142.50 -174.49 REMARK 500 LEU A 74 110.57 -168.01 REMARK 500 VAL A 111 43.44 -98.46 REMARK 500 TYR A 115 -57.02 -25.77 REMARK 500 MET A 184 -156.91 57.88 REMARK 500 ILE A 195 -8.60 -59.61 REMARK 500 ARG A 211 -13.28 -49.79 REMARK 500 PRO A 217 93.20 -62.15 REMARK 500 MET A 230 44.14 39.86 REMARK 500 ILE A 270 -34.17 -139.46 REMARK 500 VAL A 276 27.56 -143.89 REMARK 500 LEU A 282 3.26 -65.62 REMARK 500 THR A 286 140.35 -175.91 REMARK 500 LEU A 289 11.98 -66.51 REMARK 500 THR A 290 -0.74 -140.60 REMARK 500 LEU A 310 45.58 -77.76 REMARK 500 PHE A 346 -17.38 83.43 REMARK 500 PRO A 412 -179.64 -68.65 REMARK 500 LYS A 451 -3.94 64.33 REMARK 500 LYS A 465 142.15 -170.62 REMARK 500 ASN A 471 64.83 66.39 REMARK 500 HIS A 539 10.56 55.96 REMARK 500 ASN A 545 37.15 -91.15 REMARK 500 GLU A 546 -66.42 -131.13 REMARK 500 GLN A 547 0.40 -63.84 REMARK 500 THR B 69 53.14 -117.35 REMARK 500 ASP B 76 91.18 -66.92 REMARK 500 GLU B 89 -74.27 -67.55 REMARK 500 VAL B 90 -76.04 -76.48 REMARK 500 LEU B 92 39.94 -85.26 REMARK 500 THR B 128 36.00 -94.14 REMARK 500 GLU B 138 -70.71 -63.27 REMARK 500 LYS B 166 -9.93 -59.38 REMARK 500 ASN B 175 69.00 -119.07 REMARK 500 PRO B 176 0.31 -62.34 REMARK 500 MET B 184 -118.45 48.80 REMARK 500 HIS B 235 79.72 -155.84 REMARK 500 LYS B 238 46.20 -99.66 REMARK 500 THR B 240 -153.33 -146.91 REMARK 500 ILE B 270 -61.31 -107.27 REMARK 500 THR B 286 59.26 -149.17 REMARK 500 PHE B 346 -1.89 85.20 REMARK 500 LYS B 347 72.16 -104.17 REMARK 500 ARG B 356 -156.39 -81.63 REMARK 500 MET B 357 -10.94 85.32 REMARK 500 ARG B 358 79.52 -106.17 REMARK 500 ALA B 360 -116.12 -89.35 REMARK 500 REMARK 500 THIS ENTRY HAS 51 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue YBD A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 501 DBREF 7LQU A 1 555 UNP P03366 POL_HV1B1 600 1154 DBREF 7LQU B 1 428 UNP P03366 POL_HV1B1 600 1027 SEQADV 7LQU MET A -1 UNP P03366 INITIATING METHIONINE SEQADV 7LQU VAL A 0 UNP P03366 EXPRESSION TAG SEQADV 7LQU ALA A 172 UNP P03366 LYS 771 ENGINEERED MUTATION SEQADV 7LQU ALA A 173 UNP P03366 LYS 772 ENGINEERED MUTATION SEQADV 7LQU SER A 280 UNP P03366 CYS 879 ENGINEERED MUTATION SEQADV 7LQU GLY B 0 UNP P03366 EXPRESSION TAG SEQADV 7LQU SER B 280 UNP P03366 CYS 879 ENGINEERED MUTATION SEQRES 1 A 557 MET VAL PRO ILE SER PRO ILE GLU THR VAL PRO VAL LYS SEQRES 2 A 557 LEU LYS PRO GLY MET ASP GLY PRO LYS VAL LYS GLN TRP SEQRES 3 A 557 PRO LEU THR GLU GLU LYS ILE LYS ALA LEU VAL GLU ILE SEQRES 4 A 557 CYS THR GLU MET GLU LYS GLU GLY LYS ILE SER LYS ILE SEQRES 5 A 557 GLY PRO GLU ASN PRO TYR ASN THR PRO VAL PHE ALA ILE SEQRES 6 A 557 LYS LYS LYS ASP SER THR LYS TRP ARG LYS LEU VAL ASP SEQRES 7 A 557 PHE ARG GLU LEU ASN LYS ARG THR GLN ASP PHE TRP GLU SEQRES 8 A 557 VAL GLN LEU GLY ILE PRO HIS PRO ALA GLY LEU LYS LYS SEQRES 9 A 557 LYS LYS SER VAL THR VAL LEU ASP VAL GLY ASP ALA TYR SEQRES 10 A 557 PHE SER VAL PRO LEU ASP GLU ASP PHE ARG LYS TYR THR SEQRES 11 A 557 ALA PHE THR ILE PRO SER ILE ASN ASN GLU THR PRO GLY SEQRES 12 A 557 ILE ARG TYR GLN TYR ASN VAL LEU PRO GLN GLY TRP LYS SEQRES 13 A 557 GLY SER PRO ALA ILE PHE GLN SER SER MET THR LYS ILE SEQRES 14 A 557 LEU GLU PRO PHE ALA ALA GLN ASN PRO ASP ILE VAL ILE SEQRES 15 A 557 TYR GLN TYR MET ASP ASP LEU TYR VAL GLY SER ASP LEU SEQRES 16 A 557 GLU ILE GLY GLN HIS ARG THR LYS ILE GLU GLU LEU ARG SEQRES 17 A 557 GLN HIS LEU LEU ARG TRP GLY LEU THR THR PRO ASP LYS SEQRES 18 A 557 LYS HIS GLN LYS GLU PRO PRO PHE LEU TRP MET GLY TYR SEQRES 19 A 557 GLU LEU HIS PRO ASP LYS TRP THR VAL GLN PRO ILE VAL SEQRES 20 A 557 LEU PRO GLU LYS ASP SER TRP THR VAL ASN ASP ILE GLN SEQRES 21 A 557 LYS LEU VAL GLY LYS LEU ASN TRP ALA SER GLN ILE TYR SEQRES 22 A 557 PRO GLY ILE LYS VAL ARG GLN LEU SER LYS LEU LEU ARG SEQRES 23 A 557 GLY THR LYS ALA LEU THR GLU VAL ILE PRO LEU THR GLU SEQRES 24 A 557 GLU ALA GLU LEU GLU LEU ALA GLU ASN ARG GLU ILE LEU SEQRES 25 A 557 LYS GLU PRO VAL HIS GLY VAL TYR TYR ASP PRO SER LYS SEQRES 26 A 557 ASP LEU ILE ALA GLU ILE GLN LYS GLN GLY GLN GLY GLN SEQRES 27 A 557 TRP THR TYR GLN ILE TYR GLN GLU PRO PHE LYS ASN LEU SEQRES 28 A 557 LYS THR GLY LYS TYR ALA ARG MET ARG GLY ALA HIS THR SEQRES 29 A 557 ASN ASP VAL LYS GLN LEU THR GLU ALA VAL GLN LYS ILE SEQRES 30 A 557 THR THR GLU SER ILE VAL ILE TRP GLY LYS THR PRO LYS SEQRES 31 A 557 PHE LYS LEU PRO ILE GLN LYS GLU THR TRP GLU THR TRP SEQRES 32 A 557 TRP THR GLU TYR TRP GLN ALA THR TRP ILE PRO GLU TRP SEQRES 33 A 557 GLU PHE VAL ASN THR PRO PRO LEU VAL LYS LEU TRP TYR SEQRES 34 A 557 GLN LEU GLU LYS GLU PRO ILE VAL GLY ALA GLU THR PHE SEQRES 35 A 557 TYR VAL ASP GLY ALA ALA ASN ARG GLU THR LYS LEU GLY SEQRES 36 A 557 LYS ALA GLY TYR VAL THR ASN LYS GLY ARG GLN LYS VAL SEQRES 37 A 557 VAL PRO LEU THR ASN THR THR ASN GLN LYS THR GLU LEU SEQRES 38 A 557 GLN ALA ILE TYR LEU ALA LEU GLN ASP SER GLY LEU GLU SEQRES 39 A 557 VAL ASN ILE VAL THR ASP SER GLN TYR ALA LEU GLY ILE SEQRES 40 A 557 ILE GLN ALA GLN PRO ASP LYS SER GLU SER GLU LEU VAL SEQRES 41 A 557 ASN GLN ILE ILE GLU GLN LEU ILE LYS LYS GLU LYS VAL SEQRES 42 A 557 TYR LEU ALA TRP VAL PRO ALA HIS LYS GLY ILE GLY GLY SEQRES 43 A 557 ASN GLU GLN VAL ASP LYS LEU VAL SER ALA GLY SEQRES 1 B 429 GLY PRO ILE SER PRO ILE GLU THR VAL PRO VAL LYS LEU SEQRES 2 B 429 LYS PRO GLY MET ASP GLY PRO LYS VAL LYS GLN TRP PRO SEQRES 3 B 429 LEU THR GLU GLU LYS ILE LYS ALA LEU VAL GLU ILE CYS SEQRES 4 B 429 THR GLU MET GLU LYS GLU GLY LYS ILE SER LYS ILE GLY SEQRES 5 B 429 PRO GLU ASN PRO TYR ASN THR PRO VAL PHE ALA ILE LYS SEQRES 6 B 429 LYS LYS ASP SER THR LYS TRP ARG LYS LEU VAL ASP PHE SEQRES 7 B 429 ARG GLU LEU ASN LYS ARG THR GLN ASP PHE TRP GLU VAL SEQRES 8 B 429 GLN LEU GLY ILE PRO HIS PRO ALA GLY LEU LYS LYS LYS SEQRES 9 B 429 LYS SER VAL THR VAL LEU ASP VAL GLY ASP ALA TYR PHE SEQRES 10 B 429 SER VAL PRO LEU ASP GLU ASP PHE ARG LYS TYR THR ALA SEQRES 11 B 429 PHE THR ILE PRO SER ILE ASN ASN GLU THR PRO GLY ILE SEQRES 12 B 429 ARG TYR GLN TYR ASN VAL LEU PRO GLN GLY TRP LYS GLY SEQRES 13 B 429 SER PRO ALA ILE PHE GLN SER SER MET THR LYS ILE LEU SEQRES 14 B 429 GLU PRO PHE LYS LYS GLN ASN PRO ASP ILE VAL ILE TYR SEQRES 15 B 429 GLN TYR MET ASP ASP LEU TYR VAL GLY SER ASP LEU GLU SEQRES 16 B 429 ILE GLY GLN HIS ARG THR LYS ILE GLU GLU LEU ARG GLN SEQRES 17 B 429 HIS LEU LEU ARG TRP GLY LEU THR THR PRO ASP LYS LYS SEQRES 18 B 429 HIS GLN LYS GLU PRO PRO PHE LEU TRP MET GLY TYR GLU SEQRES 19 B 429 LEU HIS PRO ASP LYS TRP THR VAL GLN PRO ILE VAL LEU SEQRES 20 B 429 PRO GLU LYS ASP SER TRP THR VAL ASN ASP ILE GLN LYS SEQRES 21 B 429 LEU VAL GLY LYS LEU ASN TRP ALA SER GLN ILE TYR PRO SEQRES 22 B 429 GLY ILE LYS VAL ARG GLN LEU SER LYS LEU LEU ARG GLY SEQRES 23 B 429 THR LYS ALA LEU THR GLU VAL ILE PRO LEU THR GLU GLU SEQRES 24 B 429 ALA GLU LEU GLU LEU ALA GLU ASN ARG GLU ILE LEU LYS SEQRES 25 B 429 GLU PRO VAL HIS GLY VAL TYR TYR ASP PRO SER LYS ASP SEQRES 26 B 429 LEU ILE ALA GLU ILE GLN LYS GLN GLY GLN GLY GLN TRP SEQRES 27 B 429 THR TYR GLN ILE TYR GLN GLU PRO PHE LYS ASN LEU LYS SEQRES 28 B 429 THR GLY LYS TYR ALA ARG MET ARG GLY ALA HIS THR ASN SEQRES 29 B 429 ASP VAL LYS GLN LEU THR GLU ALA VAL GLN LYS ILE THR SEQRES 30 B 429 THR GLU SER ILE VAL ILE TRP GLY LYS THR PRO LYS PHE SEQRES 31 B 429 LYS LEU PRO ILE GLN LYS GLU THR TRP GLU THR TRP TRP SEQRES 32 B 429 THR GLU TYR TRP GLN ALA THR TRP ILE PRO GLU TRP GLU SEQRES 33 B 429 PHE VAL ASN THR PRO PRO LEU VAL LYS LEU TRP TYR GLN HET YBD A 601 26 HET SO4 A 602 5 HET SO4 A 603 5 HET SO4 B 501 5 HETNAM YBD ~{N}-[(1~{R})-2-AZANYL-1-[5-(HYDROXYMETHYL)-1,3- HETNAM 2 YBD THIAZOL-2-YL]ETHYL]-5-(4-CHLORANYL-3-FLUORANYL- HETNAM 3 YBD PHENYL)-1~{H}-PYRROLE-2-CARBOXAMIDE HETNAM SO4 SULFATE ION FORMUL 3 YBD C17 H16 CL F N4 O2 S FORMUL 4 SO4 3(O4 S 2-) FORMUL 7 HOH *101(H2 O) HELIX 1 AA1 THR A 27 LYS A 43 1 17 HELIX 2 AA2 PHE A 77 LYS A 82 1 6 HELIX 3 AA3 HIS A 96 LEU A 100 5 5 HELIX 4 AA4 ASP A 113 VAL A 118 5 6 HELIX 5 AA5 ASP A 121 LYS A 126 1 6 HELIX 6 AA6 SER A 134 GLU A 138 5 5 HELIX 7 AA7 GLY A 155 GLN A 174 1 20 HELIX 8 AA8 GLU A 194 ARG A 211 1 18 HELIX 9 AA9 THR A 253 GLN A 258 1 6 HELIX 10 AB1 VAL A 261 SER A 268 1 8 HELIX 11 AB2 SER A 280 GLY A 285 1 6 HELIX 12 AB3 GLU A 302 LEU A 310 1 9 HELIX 13 AB4 ASN A 363 GLY A 384 1 22 HELIX 14 AB5 GLN A 394 TYR A 405 1 12 HELIX 15 AB6 THR A 473 ASP A 488 1 16 HELIX 16 AB7 SER A 499 GLN A 507 1 9 HELIX 17 AB8 SER A 515 LYS A 528 1 14 HELIX 18 AB9 ILE A 542 GLU A 546 5 5 HELIX 19 AC1 VAL A 548 SER A 553 1 6 HELIX 20 AC2 THR B 27 GLU B 44 1 18 HELIX 21 AC3 PHE B 77 THR B 84 1 8 HELIX 22 AC4 VAL B 111 PHE B 116 1 6 HELIX 23 AC5 PHE B 124 ALA B 129 5 6 HELIX 24 AC6 SER B 134 GLU B 138 5 5 HELIX 25 AC7 LYS B 154 ASN B 175 1 22 HELIX 26 AC8 GLU B 194 THR B 215 1 22 HELIX 27 AC9 VAL B 254 SER B 268 1 15 HELIX 28 AD1 VAL B 276 ARG B 284 1 9 HELIX 29 AD2 THR B 296 LEU B 310 1 15 HELIX 30 AD3 ASN B 363 GLY B 384 1 22 HELIX 31 AD4 GLN B 394 TRP B 402 1 9 HELIX 32 AD5 THR B 403 TYR B 405 5 3 HELIX 33 AD6 LEU B 422 GLN B 428 1 7 SHEET 1 AA1 3 ILE A 47 SER A 48 0 SHEET 2 AA1 3 ILE A 142 TYR A 146 -1 O GLN A 145 N SER A 48 SHEET 3 AA1 3 PHE A 130 ILE A 132 -1 N ILE A 132 O ILE A 142 SHEET 1 AA2 2 VAL A 60 LYS A 64 0 SHEET 2 AA2 2 TRP A 71 VAL A 75 -1 O ARG A 72 N ILE A 63 SHEET 1 AA3 3 SER A 105 ASP A 110 0 SHEET 2 AA3 3 ASP A 186 SER A 191 -1 O LEU A 187 N LEU A 109 SHEET 3 AA3 3 ILE A 178 TYR A 183 -1 N VAL A 179 O GLY A 190 SHEET 1 AA4 3 PHE A 227 TRP A 229 0 SHEET 2 AA4 3 TYR A 232 LEU A 234 -1 O LEU A 234 N PHE A 227 SHEET 3 AA4 3 TRP A 239 VAL A 241 -1 O THR A 240 N GLU A 233 SHEET 1 AA5 5 LYS A 347 ALA A 355 0 SHEET 2 AA5 5 GLN A 336 GLU A 344 -1 N TYR A 339 O GLY A 352 SHEET 3 AA5 5 ILE A 326 LYS A 331 -1 N GLU A 328 O GLN A 340 SHEET 4 AA5 5 LYS A 388 LEU A 391 1 O LYS A 388 N ALA A 327 SHEET 5 AA5 5 TRP A 414 PHE A 416 1 O GLU A 415 N LEU A 391 SHEET 1 AA6 2 HIS A 361 THR A 362 0 SHEET 2 AA6 2 LYS A 512 SER A 513 -1 O LYS A 512 N THR A 362 SHEET 1 AA7 5 GLN A 464 LEU A 469 0 SHEET 2 AA7 5 GLY A 453 THR A 459 -1 N GLY A 453 O LEU A 469 SHEET 3 AA7 5 GLU A 438 ALA A 446 -1 N TYR A 441 O VAL A 458 SHEET 4 AA7 5 GLU A 492 THR A 497 1 O VAL A 496 N VAL A 442 SHEET 5 AA7 5 LYS A 530 TRP A 535 1 O ALA A 534 N ILE A 495 SHEET 1 AA8 3 ILE B 47 LYS B 49 0 SHEET 2 AA8 3 ILE B 142 TYR B 146 -1 O GLN B 145 N SER B 48 SHEET 3 AA8 3 PHE B 130 ILE B 132 -1 N ILE B 132 O ILE B 142 SHEET 1 AA9 2 VAL B 60 LYS B 64 0 SHEET 2 AA9 2 TRP B 71 VAL B 75 -1 O LEU B 74 N PHE B 61 SHEET 1 AB1 4 VAL B 179 TYR B 183 0 SHEET 2 AB1 4 ASP B 186 SER B 191 -1 O TYR B 188 N TYR B 181 SHEET 3 AB1 4 SER B 105 ASP B 110 -1 N LEU B 109 O LEU B 187 SHEET 4 AB1 4 TYR B 232 LEU B 234 -1 O TYR B 232 N VAL B 108 SHEET 1 AB2 2 TRP B 252 THR B 253 0 SHEET 2 AB2 2 VAL B 292 ILE B 293 -1 O ILE B 293 N TRP B 252 SHEET 1 AB3 5 ASN B 348 TYR B 354 0 SHEET 2 AB3 5 TRP B 337 TYR B 342 -1 N ILE B 341 O LYS B 350 SHEET 3 AB3 5 ILE B 326 LYS B 331 -1 N ILE B 326 O TYR B 342 SHEET 4 AB3 5 LYS B 388 LEU B 391 1 O LYS B 388 N ALA B 327 SHEET 5 AB3 5 GLU B 413 PHE B 416 1 O GLU B 413 N PHE B 389 CISPEP 1 PRO A 225 PRO A 226 0 15.50 CISPEP 2 PRO A 420 PRO A 421 0 1.08 SITE 1 AC1 8 PRO A 95 TYR A 181 TYR A 183 ASP A 186 SITE 2 AC1 8 TYR A 188 PHE A 227 TRP A 229 HOH A 706 SITE 1 AC2 4 TYR A 427 GLN A 428 LYS A 528 GLU A 529 SITE 1 AC3 3 GLY A 333 GLN A 334 LYS A 512 SITE 1 AC4 4 LYS B 275 VAL B 276 ARG B 277 GLU B 302 CRYST1 161.679 73.050 107.290 90.00 99.58 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006185 0.000000 0.001044 0.00000 SCALE2 0.000000 0.013689 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009452 0.00000