HEADER HYDROLASE 15-FEB-21 7LQX TITLE CRYSTAL STRUCTURE OF A GH5_18 FROM BIFIDOBACTERIUM LONGUM SUBSP. TITLE 2 INFANTIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOSYL HYDROLASE BLGH5_18; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BIFIDOBACTERIUM LONGUM SUBSP. INFANTIS (STRAIN SOURCE 3 ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12); SOURCE 4 ORGANISM_TAXID: 391904; SOURCE 5 STRAIN: ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12; SOURCE 6 GENE: BLON_2377; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS GLYCOSIDASE, N-GLYCAN, CAZYME, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.A.HIGGINS,K.S.RYAN REVDAT 2 28-APR-21 7LQX 1 JRNL REVDAT 1 07-APR-21 7LQX 0 JRNL AUTH M.A.HIGGINS,G.TEGL,S.S.MACDONALD,G.ARNAL,H.BRUMER, JRNL AUTH 2 S.G.WITHERS,K.S.RYAN JRNL TITL N-GLYCAN DEGRADATION PATHWAYS IN GUT- AND SOIL-DWELLING JRNL TITL 2 ACTINOBACTERIA SHARE COMMON CORE GENES. JRNL REF ACS CHEM.BIOL. V. 16 701 2021 JRNL REFN ESSN 1554-8937 JRNL PMID 33764747 JRNL DOI 10.1021/ACSCHEMBIO.0C00995 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 95179 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.137 REMARK 3 R VALUE (WORKING SET) : 0.136 REMARK 3 FREE R VALUE : 0.152 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 4653 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.4000 - 4.0400 1.00 3123 174 0.1472 0.1488 REMARK 3 2 4.0400 - 3.2100 1.00 3066 143 0.1190 0.1520 REMARK 3 3 3.2100 - 2.8000 1.00 3050 182 0.1275 0.1435 REMARK 3 4 2.8000 - 2.5400 1.00 3016 177 0.1243 0.1264 REMARK 3 5 2.5400 - 2.3600 1.00 3055 139 0.1210 0.1308 REMARK 3 6 2.3600 - 2.2200 1.00 3081 98 0.1172 0.1576 REMARK 3 7 2.2200 - 2.1100 1.00 3044 151 0.1202 0.1212 REMARK 3 8 2.1100 - 2.0200 1.00 3006 186 0.1180 0.1318 REMARK 3 9 2.0200 - 1.9400 1.00 3013 161 0.1270 0.1377 REMARK 3 10 1.9400 - 1.8700 1.00 3019 183 0.1278 0.1369 REMARK 3 11 1.8700 - 1.8200 1.00 2986 149 0.1243 0.1527 REMARK 3 12 1.8200 - 1.7600 1.00 3022 142 0.1245 0.1521 REMARK 3 13 1.7600 - 1.7200 1.00 2987 171 0.1250 0.1338 REMARK 3 14 1.7200 - 1.6800 1.00 3027 154 0.1326 0.1680 REMARK 3 15 1.6800 - 1.6400 1.00 3020 162 0.1307 0.1596 REMARK 3 16 1.6400 - 1.6000 1.00 3026 125 0.1342 0.1597 REMARK 3 17 1.6000 - 1.5700 1.00 3004 151 0.1354 0.1485 REMARK 3 18 1.5700 - 1.5400 1.00 3006 170 0.1441 0.1756 REMARK 3 19 1.5400 - 1.5100 1.00 2984 153 0.1471 0.1701 REMARK 3 20 1.5100 - 1.4900 1.00 3039 162 0.1532 0.1556 REMARK 3 21 1.4900 - 1.4600 1.00 2989 153 0.1585 0.1647 REMARK 3 22 1.4600 - 1.4400 1.00 2977 192 0.1563 0.1828 REMARK 3 23 1.4400 - 1.4200 1.00 3006 141 0.1705 0.2003 REMARK 3 24 1.4200 - 1.4000 1.00 2958 180 0.1791 0.2022 REMARK 3 25 1.4000 - 1.3800 1.00 3012 140 0.1804 0.1993 REMARK 3 26 1.3800 - 1.3600 1.00 3035 124 0.1856 0.2198 REMARK 3 27 1.3600 - 1.3500 1.00 3007 138 0.1974 0.2386 REMARK 3 28 1.3500 - 1.3300 0.99 3007 160 0.2033 0.1855 REMARK 3 29 1.3300 - 1.3100 0.99 2928 153 0.2034 0.2180 REMARK 3 30 1.3100 - 1.3000 0.99 3033 139 0.2070 0.2106 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.092 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.741 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.72 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3589 REMARK 3 ANGLE : 0.903 4902 REMARK 3 CHIRALITY : 0.074 501 REMARK 3 PLANARITY : 0.006 654 REMARK 3 DIHEDRAL : 16.870 1294 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 174 THROUGH 420 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.6862 54.3694 29.2752 REMARK 3 T TENSOR REMARK 3 T11: 0.0519 T22: 0.0562 REMARK 3 T33: 0.0595 T12: 0.0073 REMARK 3 T13: -0.0084 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 0.9184 L22: 0.5251 REMARK 3 L33: 0.7046 L12: -0.3081 REMARK 3 L13: -0.3376 L23: 0.1406 REMARK 3 S TENSOR REMARK 3 S11: -0.0237 S12: -0.0735 S13: 0.0199 REMARK 3 S21: 0.0207 S22: 0.0207 S23: -0.0306 REMARK 3 S31: -0.0097 S32: 0.0092 S33: -0.0019 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.1300 38.1292 19.2125 REMARK 3 T TENSOR REMARK 3 T11: 0.0546 T22: 0.0639 REMARK 3 T33: 0.0950 T12: 0.0118 REMARK 3 T13: 0.0014 T23: 0.0228 REMARK 3 L TENSOR REMARK 3 L11: 0.3538 L22: 2.0998 REMARK 3 L33: 2.1916 L12: 0.4136 REMARK 3 L13: 0.2175 L23: -0.3795 REMARK 3 S TENSOR REMARK 3 S11: -0.0971 S12: -0.0246 S13: -0.1079 REMARK 3 S21: 0.0184 S22: 0.0212 S23: 0.0268 REMARK 3 S31: 0.1533 S32: -0.1347 S33: 0.0839 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.9283 44.8736 9.2490 REMARK 3 T TENSOR REMARK 3 T11: 0.0566 T22: 0.0745 REMARK 3 T33: 0.0845 T12: -0.0067 REMARK 3 T13: 0.0039 T23: -0.0132 REMARK 3 L TENSOR REMARK 3 L11: 0.7135 L22: 0.4591 REMARK 3 L33: 1.1693 L12: 0.0337 REMARK 3 L13: -0.3680 L23: -0.1832 REMARK 3 S TENSOR REMARK 3 S11: -0.0489 S12: 0.0538 S13: -0.0932 REMARK 3 S21: -0.0008 S22: 0.0040 S23: 0.0181 REMARK 3 S31: 0.1031 S32: -0.1078 S33: 0.0330 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7LQX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1000254857. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97911 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 95210 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 44.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8 % PEG 2000, 0.2 M LITHIUM SULFATE, REMARK 280 0.1 M BIS-TRIS PH 6.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.41500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.86000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.41500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.86000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 88.83000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1171 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1179 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1256 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 SER A 421 REMARK 465 ASP A 422 REMARK 465 SER A 423 REMARK 465 SER A 424 REMARK 465 PHE A 425 REMARK 465 ALA A 426 REMARK 465 GLU A 427 REMARK 465 LEU A 428 REMARK 465 ASP A 429 REMARK 465 ALA A 430 REMARK 465 ARG A 431 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 LYS A 116 CD CE NZ REMARK 470 GLU A 124 CD OE1 OE2 REMARK 470 GLU A 267 CD OE1 OE2 REMARK 470 GLN A 268 CD OE1 NE2 REMARK 470 GLU A 353 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE21 GLN A 282 O HOH A 603 1.39 REMARK 500 HE22 GLN A 282 O HOH A 605 1.41 REMARK 500 OE1 GLN A 282 HH12 ARG A 382 1.57 REMARK 500 O HOH A 640 O HOH A 912 1.83 REMARK 500 O HOH A 1096 O HOH A 1157 1.85 REMARK 500 O HOH A 974 O HOH A 1132 1.86 REMARK 500 O HOH A 982 O HOH A 1118 1.90 REMARK 500 O HOH A 711 O HOH A 937 1.92 REMARK 500 O HOH A 606 O HOH A 1069 1.95 REMARK 500 O HOH A 640 O HOH A 733 1.96 REMARK 500 O HOH A 791 O HOH A 824 1.99 REMARK 500 O HOH A 1048 O HOH A 1240 2.00 REMARK 500 O HOH A 843 O HOH A 1068 2.00 REMARK 500 O HOH A 1055 O HOH A 1155 2.00 REMARK 500 O HOH A 995 O HOH A 1222 2.02 REMARK 500 O HOH A 1212 O HOH A 1258 2.02 REMARK 500 O HOH A 1088 O HOH A 1099 2.02 REMARK 500 O HOH A 1107 O HOH A 1117 2.04 REMARK 500 O HOH A 732 O HOH A 1078 2.05 REMARK 500 O HOH A 1055 O HOH A 1165 2.06 REMARK 500 NH1 ARG A 61 O HOH A 601 2.06 REMARK 500 O HOH A 623 O HOH A 1178 2.07 REMARK 500 O HOH A 1078 O HOH A 1213 2.07 REMARK 500 O HOH A 1128 O HOH A 1160 2.07 REMARK 500 O HOH A 634 O HOH A 1164 2.08 REMARK 500 OE1 GLU A 395 O HOH A 602 2.08 REMARK 500 O HOH A 607 O HOH A 1015 2.10 REMARK 500 NE2 GLN A 282 O HOH A 603 2.11 REMARK 500 O HOH A 618 O HOH A 652 2.11 REMARK 500 O HOH A 680 O HOH A 1035 2.14 REMARK 500 O HOH A 693 O HOH A 1050 2.14 REMARK 500 OE1 GLN A 282 O HOH A 604 2.14 REMARK 500 O HOH A 1073 O HOH A 1144 2.14 REMARK 500 O HOH A 805 O HOH A 824 2.15 REMARK 500 O HOH A 1037 O HOH A 1121 2.15 REMARK 500 O HOH A 781 O HOH A 1134 2.16 REMARK 500 O HOH A 1042 O HOH A 1067 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 668 O HOH A 1074 1565 1.84 REMARK 500 O HOH A 875 O HOH A 999 2655 1.89 REMARK 500 O HOH A 911 O HOH A 1098 2656 1.95 REMARK 500 O HOH A 1207 O HOH A 1207 2656 1.98 REMARK 500 O HOH A 995 O HOH A 1116 1545 2.01 REMARK 500 O HOH A 1071 O HOH A 1138 2656 2.02 REMARK 500 O HOH A 889 O HOH A 1137 2655 2.02 REMARK 500 O HOH A 932 O HOH A 1168 2655 2.08 REMARK 500 O HOH A 748 O HOH A 1071 2656 2.11 REMARK 500 O HOH A 735 O HOH A 1049 2656 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 16 -145.62 55.05 REMARK 500 ASP A 22 74.17 -157.46 REMARK 500 SER A 92 -10.23 90.49 REMARK 500 THR A 102 -109.88 45.57 REMARK 500 ASN A 204 -30.33 -138.74 REMARK 500 ASP A 303 -0.47 73.30 REMARK 500 ASP A 303 -0.47 74.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1261 DISTANCE = 6.06 ANGSTROMS DBREF 7LQX A 1 431 UNP B7GNS6 B7GNS6_BIFLS 1 431 SEQADV 7LQX MSE A -19 UNP B7GNS6 INITIATING METHIONINE SEQADV 7LQX GLY A -18 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX SER A -17 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX SER A -16 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX HIS A -15 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX HIS A -14 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX HIS A -13 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX HIS A -12 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX HIS A -11 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX HIS A -10 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX SER A -9 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX SER A -8 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX GLY A -7 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX LEU A -6 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX VAL A -5 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX PRO A -4 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX ARG A -3 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX GLY A -2 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX SER A -1 UNP B7GNS6 EXPRESSION TAG SEQADV 7LQX HIS A 0 UNP B7GNS6 EXPRESSION TAG SEQRES 1 A 451 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 451 LEU VAL PRO ARG GLY SER HIS MET MSE ARG MSE ARG PHE SEQRES 3 A 451 GLY VAL ASN TYR THR PRO SER HIS GLY TRP PHE HIS PHE SEQRES 4 A 451 TRP LEU ASP PRO ASP TRP PRO SER VAL LYS GLU ASP MSE SEQRES 5 A 451 ARG ARG ILE ARG ASN LEU GLY MSE ASP HIS VAL ARG VAL SEQRES 6 A 451 PHE PRO VAL TRP PRO TYR LEU GLN PRO ASN ARG THR TRP SEQRES 7 A 451 ILE ASN ARG LYS ALA ILE ALA ASP VAL ARG ARG MSE VAL SEQRES 8 A 451 HIS ILE ALA GLY GLU GLN GLY MSE ASP ALA TYR VAL ASP SEQRES 9 A 451 VAL PHE GLN GLY HIS LEU SER SER PHE ASP PHE LEU PRO SEQRES 10 A 451 SER TRP LEU VAL THR TRP HIS ARG GLY ASN MSE PHE GLU SEQRES 11 A 451 ASP ALA ASP ALA VAL LYS ALA GLU LYS THR LEU VAL ALA SEQRES 12 A 451 GLU LEU TYR GLY GLU LEU ALA GLN GLU PRO ALA PHE ARG SEQRES 13 A 451 GLY LEU THR LEU GLY ASN GLU LEU ASN GLN PHE SER ASP SEQRES 14 A 451 ARG PRO HIS PRO ALA LYS MSE ALA THR SER SER ARG ARG SEQRES 15 A 451 ILE ASP ALA TRP LEU ALA ASP LEU LEU ALA VAL VAL ASP SEQRES 16 A 451 ARG ARG LYS HIS VAL ALA LEU HIS SER GLU ASN ASP GLY SEQRES 17 A 451 VAL TRP TYR LEU ASP HIS HIS PRO PHE THR PRO VAL GLN SEQRES 18 A 451 ALA ALA ASN LEU GLY ASP MSE THR THR ILE HIS SER TRP SEQRES 19 A 451 VAL PHE ASN GLY THR ALA GLN GLY TYR GLY ALA MSE SER SEQRES 20 A 451 GLY GLU CYS THR ALA HIS ALA LEU TYR LEU ALA GLU LEU SEQRES 21 A 451 SER ARG ALA PHE ALA ARG ASN PRO ASP ARG PRO VAL TRP SEQRES 22 A 451 LEU GLN GLU VAL GLY ALA PRO GLN ASN VAL LEU GLU ALA SEQRES 23 A 451 GLU GLN THR PRO GLU PHE CYS ARG ASP THR ILE ALA LYS SEQRES 24 A 451 ALA ALA GLN CYS PRO ASN LEU TRP GLY VAL THR TRP TRP SEQRES 25 A 451 CYS SER HIS ASP VAL ASP SER ARG MSE SER ASP PHE PRO SEQRES 26 A 451 PRO PHE GLU HIS ALA LEU GLY LEU PHE ASP GLU HIS GLY SEQRES 27 A 451 ASN ILE LYS PRO ILE GLY ARG ALA PHE ALA GLU MSE ALA SEQRES 28 A 451 GLN GLU TYR ARG ASP LYS PRO ALA ALA GLY GLY ASN ASP SEQRES 29 A 451 ALA ALA VAL VAL ILE GLU VAL ASP GLU ASN GLY ASN PRO SEQRES 30 A 451 LEU ASN ARG GLY ALA CYS GLY PRO GLY GLY SER ILE PHE SEQRES 31 A 451 GLU ARG TRP MSE ARG LEU HIS ALA GLU GLY ALA ARG PRO SEQRES 32 A 451 THR LEU VAL THR SER ALA THR ALA ARG ASP GLY GLU ALA SEQRES 33 A 451 LEU ARG ARG LEU GLY VAL THR ARG LEU GLU THR ASP ASP SEQRES 34 A 451 GLU PRO HIS GLY ALA LYS TYR TYR THR ALA VAL SER ASP SEQRES 35 A 451 SER SER PHE ALA GLU LEU ASP ALA ARG MODRES 7LQX MSE A 2 MET MODIFIED RESIDUE MODRES 7LQX MSE A 4 MET MODIFIED RESIDUE MODRES 7LQX MSE A 32 MET MODIFIED RESIDUE MODRES 7LQX MSE A 40 MET MODIFIED RESIDUE MODRES 7LQX MSE A 70 MET MODIFIED RESIDUE MODRES 7LQX MSE A 79 MET MODIFIED RESIDUE MODRES 7LQX MSE A 108 MET MODIFIED RESIDUE MODRES 7LQX MSE A 156 MET MODIFIED RESIDUE MODRES 7LQX MSE A 208 MET MODIFIED RESIDUE MODRES 7LQX MSE A 226 MET MODIFIED RESIDUE MODRES 7LQX MSE A 301 MET MODIFIED RESIDUE MODRES 7LQX MSE A 330 MET MODIFIED RESIDUE MODRES 7LQX MSE A 374 MET MODIFIED RESIDUE HET MSE A 2 17 HET MSE A 4 18 HET MSE A 32 17 HET MSE A 40 17 HET MSE A 70 17 HET MSE A 79 17 HET MSE A 108 17 HET MSE A 156 17 HET MSE A 208 17 HET MSE A 226 17 HET MSE A 301 17 HET MSE A 330 17 HET MSE A 374 17 HET EDO A 501 10 HET EDO A 502 10 HET EDO A 503 10 HET EDO A 504 10 HET SO4 A 505 5 HET SO4 A 506 5 HET SO4 A 507 5 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 13(C5 H11 N O2 SE) FORMUL 2 EDO 4(C2 H6 O2) FORMUL 6 SO4 3(O4 S 2-) FORMUL 9 HOH *661(H2 O) HELIX 1 AA1 GLY A 15 ASP A 22 5 8 HELIX 2 AA2 ASP A 24 LEU A 38 1 15 HELIX 3 AA3 VAL A 48 GLN A 53 1 6 HELIX 4 AA4 ASN A 60 GLN A 77 1 18 HELIX 5 AA5 PRO A 97 ARG A 105 5 9 HELIX 6 AA6 ASP A 111 ALA A 130 1 20 HELIX 7 AA7 GLU A 143 SER A 148 5 6 HELIX 8 AA8 SER A 159 ALA A 172 1 14 HELIX 9 AA9 ASP A 187 LEU A 192 1 6 HELIX 10 AB1 THR A 198 LEU A 205 1 8 HELIX 11 AB2 TRP A 214 ASN A 217 5 4 HELIX 12 AB3 GLY A 218 GLY A 224 1 7 HELIX 13 AB4 SER A 227 ALA A 245 1 19 HELIX 14 AB5 GLU A 265 GLU A 267 5 3 HELIX 15 AB6 GLN A 268 ALA A 281 1 14 HELIX 16 AB7 PRO A 305 LEU A 311 5 7 HELIX 17 AB8 LYS A 321 ARG A 335 1 15 HELIX 18 AB9 ARG A 360 GLY A 364 5 5 HELIX 19 AC1 GLY A 367 GLY A 380 1 14 HELIX 20 AC2 ALA A 389 ARG A 392 5 4 HELIX 21 AC3 ASP A 393 GLY A 401 1 9 HELIX 22 AC4 ALA A 414 VAL A 420 1 7 SHEET 1 AA1 8 VAL A 180 LEU A 182 0 SHEET 2 AA1 8 PHE A 135 THR A 139 1 N LEU A 138 O LEU A 182 SHEET 3 AA1 8 ASP A 80 ASP A 84 1 N ALA A 81 O ARG A 136 SHEET 4 AA1 8 HIS A 42 VAL A 45 1 N VAL A 45 O TYR A 82 SHEET 5 AA1 8 ARG A 5 ASN A 9 1 N VAL A 8 O ARG A 44 SHEET 6 AA1 8 LEU A 286 TRP A 291 1 O TRP A 291 N ASN A 9 SHEET 7 AA1 8 VAL A 252 VAL A 257 1 N VAL A 252 O TRP A 287 SHEET 8 AA1 8 THR A 209 SER A 213 1 N THR A 209 O TRP A 253 SHEET 1 AA2 2 HIS A 89 LEU A 90 0 SHEET 2 AA2 2 PHE A 93 ASP A 94 -1 O PHE A 93 N LEU A 90 SHEET 1 AA3 3 PRO A 383 THR A 387 0 SHEET 2 AA3 3 ALA A 345 ILE A 349 1 N ILE A 349 O VAL A 386 SHEET 3 AA3 3 ARG A 404 GLU A 406 1 O GLU A 406 N VAL A 348 LINK C MET A 1 N MSE A 2 1555 1555 1.33 LINK C MSE A 2 N AARG A 3 1555 1555 1.33 LINK C MSE A 2 N BARG A 3 1555 1555 1.33 LINK C AARG A 3 N MSE A 4 1555 1555 1.33 LINK C BARG A 3 N MSE A 4 1555 1555 1.34 LINK C MSE A 4 N AARG A 5 1555 1555 1.32 LINK C MSE A 4 N BARG A 5 1555 1555 1.33 LINK C ASP A 31 N MSE A 32 1555 1555 1.33 LINK C MSE A 32 N ARG A 33 1555 1555 1.33 LINK C GLY A 39 N MSE A 40 1555 1555 1.33 LINK C MSE A 40 N ASP A 41 1555 1555 1.33 LINK C ARG A 69 N MSE A 70 1555 1555 1.33 LINK C MSE A 70 N VAL A 71 1555 1555 1.33 LINK C GLY A 78 N MSE A 79 1555 1555 1.33 LINK C MSE A 79 N ASP A 80 1555 1555 1.33 LINK C ASN A 107 N MSE A 108 1555 1555 1.33 LINK C MSE A 108 N PHE A 109 1555 1555 1.33 LINK C LYS A 155 N MSE A 156 1555 1555 1.33 LINK C MSE A 156 N ALA A 157 1555 1555 1.33 LINK C ASP A 207 N MSE A 208 1555 1555 1.33 LINK C MSE A 208 N THR A 209 1555 1555 1.33 LINK C ALA A 225 N MSE A 226 1555 1555 1.33 LINK C MSE A 226 N SER A 227 1555 1555 1.33 LINK C ARG A 300 N MSE A 301 1555 1555 1.32 LINK C MSE A 301 N ASER A 302 1555 1555 1.33 LINK C MSE A 301 N BSER A 302 1555 1555 1.33 LINK C GLU A 329 N MSE A 330 1555 1555 1.32 LINK C MSE A 330 N ALA A 331 1555 1555 1.33 LINK C TRP A 373 N MSE A 374 1555 1555 1.33 LINK C MSE A 374 N ARG A 375 1555 1555 1.33 CISPEP 1 GLN A 87 GLY A 88 0 11.00 CISPEP 2 ARG A 150 PRO A 151 0 5.65 CISPEP 3 TRP A 292 CYS A 293 0 8.58 CRYST1 88.830 51.720 85.450 90.00 91.24 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011257 0.000000 0.000244 0.00000 SCALE2 0.000000 0.019335 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011705 0.00000