HEADER HYDROLASE 16-FEB-21 7LR7 TITLE CRYSTAL STRUCTURE OF GH5_18 FROM STREPTOMYCES CATTLEYA IN COMPLEX WITH TITLE 2 GLCNAC COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN SCGH5_18; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES CATTLEYA (STRAIN ATCC 35852 / DSM SOURCE 3 46488 / JCM 4925 / NBRC 14057 / NRRL 8057); SOURCE 4 ORGANISM_TAXID: 1003195; SOURCE 5 STRAIN: ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057; SOURCE 6 GENE: SCATT_P07120; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS GLYCOSIDASE, N-GLYCAN, CAZYME, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.A.HIGGINS,K.S.RYAN REVDAT 3 18-OCT-23 7LR7 1 REMARK REVDAT 2 28-APR-21 7LR7 1 JRNL REVDAT 1 07-APR-21 7LR7 0 JRNL AUTH M.A.HIGGINS,G.TEGL,S.S.MACDONALD,G.ARNAL,H.BRUMER, JRNL AUTH 2 S.G.WITHERS,K.S.RYAN JRNL TITL N-GLYCAN DEGRADATION PATHWAYS IN GUT- AND SOIL-DWELLING JRNL TITL 2 ACTINOBACTERIA SHARE COMMON CORE GENES. JRNL REF ACS CHEM.BIOL. V. 16 701 2021 JRNL REFN ESSN 1554-8937 JRNL PMID 33764747 JRNL DOI 10.1021/ACSCHEMBIO.0C00995 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 32249 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.770 REMARK 3 FREE R VALUE TEST SET COUNT : 1538 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.3300 - 4.3400 0.99 2968 134 0.1537 0.2029 REMARK 3 2 4.3400 - 3.4400 1.00 2865 137 0.1335 0.1675 REMARK 3 3 3.4400 - 3.0100 1.00 2792 147 0.1547 0.2240 REMARK 3 4 3.0100 - 2.7300 1.00 2786 145 0.1666 0.2213 REMARK 3 5 2.7300 - 2.5400 1.00 2763 147 0.1600 0.2107 REMARK 3 6 2.5400 - 2.3900 0.99 2782 132 0.1663 0.1969 REMARK 3 7 2.3900 - 2.2700 1.00 2756 136 0.1787 0.2186 REMARK 3 8 2.2700 - 2.1700 1.00 2737 163 0.1998 0.2341 REMARK 3 9 2.1700 - 2.0800 1.00 2807 120 0.2170 0.3151 REMARK 3 10 2.0800 - 2.0100 0.99 2734 150 0.2581 0.2855 REMARK 3 11 2.0100 - 1.9500 0.99 2721 127 0.2962 0.3868 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.265 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.408 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.98 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3354 REMARK 3 ANGLE : 0.843 4604 REMARK 3 CHIRALITY : 0.055 505 REMARK 3 PLANARITY : 0.005 608 REMARK 3 DIHEDRAL : 6.857 1937 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4466 14.3051 45.9389 REMARK 3 T TENSOR REMARK 3 T11: 0.1307 T22: 0.2328 REMARK 3 T33: 0.1288 T12: 0.0148 REMARK 3 T13: -0.0025 T23: 0.0483 REMARK 3 L TENSOR REMARK 3 L11: 0.4286 L22: 3.7789 REMARK 3 L33: 0.7690 L12: -0.3281 REMARK 3 L13: -0.3416 L23: -0.5124 REMARK 3 S TENSOR REMARK 3 S11: 0.0002 S12: 0.2113 S13: 0.0318 REMARK 3 S21: -0.0579 S22: 0.0692 S23: -0.0464 REMARK 3 S31: -0.0765 S32: -0.0631 S33: -0.0710 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9583 12.1267 46.4606 REMARK 3 T TENSOR REMARK 3 T11: 0.1170 T22: 0.1465 REMARK 3 T33: 0.1483 T12: 0.0259 REMARK 3 T13: -0.0234 T23: 0.0282 REMARK 3 L TENSOR REMARK 3 L11: 3.5141 L22: 2.4882 REMARK 3 L33: 3.4580 L12: 0.6606 REMARK 3 L13: -1.8117 L23: -0.9370 REMARK 3 S TENSOR REMARK 3 S11: 0.0179 S12: 0.1445 S13: 0.0818 REMARK 3 S21: -0.0855 S22: -0.0080 S23: -0.0415 REMARK 3 S31: -0.1093 S32: 0.0696 S33: -0.0193 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 106 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6370 0.8991 59.2169 REMARK 3 T TENSOR REMARK 3 T11: 0.1537 T22: 0.2149 REMARK 3 T33: 0.1795 T12: 0.0245 REMARK 3 T13: -0.0175 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.6794 L22: 1.8629 REMARK 3 L33: 1.7958 L12: 0.2864 REMARK 3 L13: -0.2073 L23: -0.8652 REMARK 3 S TENSOR REMARK 3 S11: 0.0361 S12: 0.0677 S13: 0.1099 REMARK 3 S21: 0.1686 S22: -0.0740 S23: -0.1940 REMARK 3 S31: -0.0046 S32: 0.1231 S33: 0.0615 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7636 14.5113 52.2473 REMARK 3 T TENSOR REMARK 3 T11: 0.1489 T22: 0.1901 REMARK 3 T33: 0.1815 T12: 0.0398 REMARK 3 T13: 0.0170 T23: 0.0413 REMARK 3 L TENSOR REMARK 3 L11: 2.1282 L22: 2.1147 REMARK 3 L33: 7.0553 L12: 1.1214 REMARK 3 L13: -2.2201 L23: -1.7218 REMARK 3 S TENSOR REMARK 3 S11: -0.0410 S12: 0.2592 S13: 0.2046 REMARK 3 S21: -0.2173 S22: 0.1298 S23: -0.1418 REMARK 3 S31: 0.2228 S32: -0.1013 S33: -0.1561 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 158 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5334 9.5918 65.6950 REMARK 3 T TENSOR REMARK 3 T11: 0.1971 T22: 0.1162 REMARK 3 T33: 0.1907 T12: 0.0366 REMARK 3 T13: -0.0122 T23: 0.0200 REMARK 3 L TENSOR REMARK 3 L11: 1.9050 L22: 1.6097 REMARK 3 L33: 5.9772 L12: 1.4740 REMARK 3 L13: -1.4276 L23: -0.9940 REMARK 3 S TENSOR REMARK 3 S11: 0.0001 S12: -0.1986 S13: -0.1653 REMARK 3 S21: 0.2676 S22: -0.1504 S23: -0.2508 REMARK 3 S31: 0.0643 S32: 0.3822 S33: 0.1446 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 225 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.2520 20.2341 63.8570 REMARK 3 T TENSOR REMARK 3 T11: 0.1731 T22: 0.1222 REMARK 3 T33: 0.1908 T12: -0.0098 REMARK 3 T13: -0.0460 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 4.9002 L22: 3.1332 REMARK 3 L33: 2.0876 L12: -1.5977 REMARK 3 L13: -2.7338 L23: 1.6634 REMARK 3 S TENSOR REMARK 3 S11: -0.0122 S12: -0.0083 S13: 0.2540 REMARK 3 S21: 0.2309 S22: 0.0755 S23: -0.1517 REMARK 3 S31: 0.0734 S32: 0.0103 S33: -0.0879 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 226 THROUGH 256 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.4347 32.1320 66.5162 REMARK 3 T TENSOR REMARK 3 T11: 0.2450 T22: 0.1557 REMARK 3 T33: 0.2161 T12: 0.0401 REMARK 3 T13: 0.0243 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 3.0260 L22: 2.2249 REMARK 3 L33: 2.0159 L12: 2.2844 REMARK 3 L13: 1.2482 L23: 0.2372 REMARK 3 S TENSOR REMARK 3 S11: -0.0690 S12: -0.0055 S13: 0.1480 REMARK 3 S21: 0.2109 S22: 0.0485 S23: 0.2522 REMARK 3 S31: -0.2033 S32: -0.1622 S33: 0.0194 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 257 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3294 31.9911 57.5942 REMARK 3 T TENSOR REMARK 3 T11: 0.1997 T22: 0.1409 REMARK 3 T33: 0.1614 T12: 0.0137 REMARK 3 T13: 0.0255 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 4.6118 L22: 2.9430 REMARK 3 L33: 2.4304 L12: -0.2357 REMARK 3 L13: 1.4857 L23: -0.6103 REMARK 3 S TENSOR REMARK 3 S11: 0.0314 S12: -0.0276 S13: 0.2892 REMARK 3 S21: 0.0646 S22: -0.0629 S23: 0.0129 REMARK 3 S31: -0.2474 S32: -0.1006 S33: 0.0422 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 295 THROUGH 317 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3703 22.2954 52.8045 REMARK 3 T TENSOR REMARK 3 T11: 0.1652 T22: 0.1744 REMARK 3 T33: 0.2195 T12: 0.0373 REMARK 3 T13: -0.0196 T23: 0.0578 REMARK 3 L TENSOR REMARK 3 L11: 1.2542 L22: 2.4970 REMARK 3 L33: 0.9531 L12: 1.5385 REMARK 3 L13: -0.7288 L23: -0.3918 REMARK 3 S TENSOR REMARK 3 S11: -0.1221 S12: 0.0946 S13: 0.0714 REMARK 3 S21: -0.1360 S22: 0.0045 S23: -0.1196 REMARK 3 S31: -0.0196 S32: -0.0378 S33: 0.1132 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 318 THROUGH 348 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.2808 29.7234 47.0149 REMARK 3 T TENSOR REMARK 3 T11: 0.2099 T22: 0.2001 REMARK 3 T33: 0.2169 T12: 0.0560 REMARK 3 T13: -0.0032 T23: 0.0673 REMARK 3 L TENSOR REMARK 3 L11: 4.2761 L22: 3.2198 REMARK 3 L33: 1.0223 L12: 2.2828 REMARK 3 L13: -0.3004 L23: 0.1992 REMARK 3 S TENSOR REMARK 3 S11: -0.0904 S12: 0.2637 S13: 0.3709 REMARK 3 S21: -0.2564 S22: 0.0868 S23: 0.1682 REMARK 3 S31: -0.1019 S32: 0.0381 S33: -0.0059 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 349 THROUGH 400 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.1721 35.9524 70.1488 REMARK 3 T TENSOR REMARK 3 T11: 0.1865 T22: 0.1596 REMARK 3 T33: 0.2609 T12: 0.0314 REMARK 3 T13: -0.0354 T23: -0.0160 REMARK 3 L TENSOR REMARK 3 L11: 2.5719 L22: 2.6844 REMARK 3 L33: 5.7924 L12: 1.8530 REMARK 3 L13: -0.5760 L23: -0.1862 REMARK 3 S TENSOR REMARK 3 S11: -0.0113 S12: -0.0181 S13: 0.3640 REMARK 3 S21: 0.1423 S22: 0.0036 S23: 0.0255 REMARK 3 S31: -0.3510 S32: 0.1407 S33: 0.0507 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 401 THROUGH 406 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2200 34.0768 75.7910 REMARK 3 T TENSOR REMARK 3 T11: 0.2454 T22: 0.2946 REMARK 3 T33: 0.3586 T12: -0.0254 REMARK 3 T13: -0.0703 T23: -0.0430 REMARK 3 L TENSOR REMARK 3 L11: 4.4277 L22: 1.1535 REMARK 3 L33: 9.8329 L12: -0.5940 REMARK 3 L13: -6.4400 L23: 0.1731 REMARK 3 S TENSOR REMARK 3 S11: -0.0484 S12: 0.7635 S13: -1.0249 REMARK 3 S21: -0.2872 S22: -0.0615 S23: -0.0329 REMARK 3 S31: -0.0207 S32: -0.2762 S33: 0.2244 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 407 THROUGH 413 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.3655 37.7584 68.2399 REMARK 3 T TENSOR REMARK 3 T11: 0.3224 T22: 0.2715 REMARK 3 T33: 0.3105 T12: -0.0554 REMARK 3 T13: -0.0226 T23: 0.0266 REMARK 3 L TENSOR REMARK 3 L11: 7.5494 L22: 9.8487 REMARK 3 L33: 9.6721 L12: 3.5358 REMARK 3 L13: 2.4315 L23: 2.7228 REMARK 3 S TENSOR REMARK 3 S11: -0.1994 S12: -0.0817 S13: 0.0489 REMARK 3 S21: -0.1735 S22: -0.2170 S23: -0.7015 REMARK 3 S31: 0.0640 S32: 0.6859 S33: 0.2664 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 414 THROUGH 420 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9993 42.9464 72.4542 REMARK 3 T TENSOR REMARK 3 T11: 0.3680 T22: 0.1832 REMARK 3 T33: 0.3926 T12: -0.0420 REMARK 3 T13: -0.0809 T23: 0.0362 REMARK 3 L TENSOR REMARK 3 L11: 4.0960 L22: 7.0297 REMARK 3 L33: 9.3187 L12: -0.9079 REMARK 3 L13: 2.0694 L23: -2.0410 REMARK 3 S TENSOR REMARK 3 S11: -0.2328 S12: 0.1346 S13: 0.7237 REMARK 3 S21: 0.2314 S22: 0.3992 S23: 0.7696 REMARK 3 S31: -0.7825 S32: 0.2332 S33: -0.1598 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 421 THROUGH 425 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5544 42.8278 81.0854 REMARK 3 T TENSOR REMARK 3 T11: 0.4765 T22: 0.6020 REMARK 3 T33: 0.6036 T12: 0.0930 REMARK 3 T13: -0.1824 T23: -0.1451 REMARK 3 L TENSOR REMARK 3 L11: 5.3732 L22: 8.3313 REMARK 3 L33: 2.5110 L12: -3.7037 REMARK 3 L13: 3.6594 L23: -2.6687 REMARK 3 S TENSOR REMARK 3 S11: -0.8425 S12: -1.8328 S13: 1.2114 REMARK 3 S21: 0.2610 S22: -0.1741 S23: 0.9776 REMARK 3 S31: -1.6293 S32: -0.8758 S33: 0.8805 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7LR7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1000254877. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32258 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 79.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7LQX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 3350, 0.2 M SODIUM REMARK 280 THIOCYANATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 23.57550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.88050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 79.78500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 23.57550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.88050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 79.78500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 23.57550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.88050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 79.78500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 23.57550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 57.88050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 79.78500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 917 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 GLN A 4 REMARK 465 HIS A 5 REMARK 465 GLY A 6 REMARK 465 ALA A 7 REMARK 465 PRO A 8 REMARK 465 PRO A 9 REMARK 465 LEU A 426 REMARK 465 GLU A 427 REMARK 465 HIS A 428 REMARK 465 HIS A 429 REMARK 465 HIS A 430 REMARK 465 HIS A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 10 OG REMARK 470 ARG A 12 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 238 CD NE CZ NH1 NH2 REMARK 470 ARG A 258 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 311 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 318 CG CD OE1 OE2 REMARK 470 ARG A 354 CD NE CZ NH1 NH2 REMARK 470 ARG A 388 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 417 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 895 O HOH A 904 2.09 REMARK 500 O HOH A 842 O HOH A 932 2.18 REMARK 500 O HOH A 881 O HOH A 910 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 823 O HOH A 837 2555 2.13 REMARK 500 O HOH A 639 O HOH A 639 2555 2.17 REMARK 500 O HOH A 791 O HOH A 791 2555 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 26 -147.90 57.87 REMARK 500 SER A 102 -9.31 85.02 REMARK 500 THR A 112 -104.58 33.74 REMARK 500 THR A 397 -168.30 -103.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 942 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A 943 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH A 944 DISTANCE = 7.37 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AE3 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 503 DBREF 7LR7 A 1 425 UNP F8JJ04 F8JJ04_STREN 1 425 SEQADV 7LR7 LEU A 426 UNP F8JJ04 EXPRESSION TAG SEQADV 7LR7 GLU A 427 UNP F8JJ04 EXPRESSION TAG SEQADV 7LR7 HIS A 428 UNP F8JJ04 EXPRESSION TAG SEQADV 7LR7 HIS A 429 UNP F8JJ04 EXPRESSION TAG SEQADV 7LR7 HIS A 430 UNP F8JJ04 EXPRESSION TAG SEQADV 7LR7 HIS A 431 UNP F8JJ04 EXPRESSION TAG SEQADV 7LR7 HIS A 432 UNP F8JJ04 EXPRESSION TAG SEQADV 7LR7 HIS A 433 UNP F8JJ04 EXPRESSION TAG SEQRES 1 A 433 MET ALA ALA GLN HIS GLY ALA PRO PRO SER ALA ARG SER SEQRES 2 A 433 PRO ARG PHE GLY VAL ASN TYR THR PRO SER ASN GLY TRP SEQRES 3 A 433 PHE HIS HIS TRP LEU ASP PHE ASP LEU ASP ALA VAL ARG SEQRES 4 A 433 ALA ASP LEU ASP SER VAL ALA ALA LEU GLY PHE ASP HIS SEQRES 5 A 433 VAL ARG VAL PHE PRO LEU TRP PRO VAL PHE GLN PRO ASN SEQRES 6 A 433 ARG THR LEU ILE ARG PRO ARG ALA VAL GLU GLN LEU ALA SEQRES 7 A 433 ALA LEU THR ASP ALA ALA GLY GLU ARG GLY LEU ASP VAL SEQRES 8 A 433 ASN VAL ASP GLY LEU GLN GLY HIS LEU SER SER PHE ASP SEQRES 9 A 433 PHE LEU PRO ALA TRP THR THR THR TRP HIS ARG ARG ASN SEQRES 10 A 433 LEU PHE THR ASP PRO ASP VAL VAL SER GLY GLN ALA GLU SEQRES 11 A 433 TYR LEU ARG THR LEU ALA ALA ALA LEU ALA ASP ARG PRO SEQRES 12 A 433 ASN PHE LEU GLY MET THR VAL GLY ASN GLU ILE ASN GLN SEQRES 13 A 433 PHE SER GLY HIS PRO HIS PRO ASP PRO ASP ARG VAL THR SEQRES 14 A 433 PRO GLU GLN ALA GLY ASP TRP LEU ARG ARG MET LEU ASP SEQRES 15 A 433 ALA CYS GLU ARG GLY ALA PRO GLY ARG LEU HIS LEU HIS SEQRES 16 A 433 ALA GLU TYR ASP ALA ALA TRP TYR LEU ASP ASP HIS PRO SEQRES 17 A 433 PHE THR PRO ALA HIS SER ALA ARG ILE GLY ALA VAL THR SEQRES 18 A 433 ALA VAL HIS SER TRP VAL PHE ASN GLY THR ALA GLN ARG SEQRES 19 A 433 TYR GLY THR ARG SER THR ALA THR ALA GLN HIS ALA ALA SEQRES 20 A 433 TYR LEU VAL GLU LEU ALA LYS ALA TRP ALA ARG GLU PRO SEQRES 21 A 433 ARG ARG PRO VAL TRP LEU GLN GLU VAL GLY ALA PRO ALA SEQRES 22 A 433 PRO HIS VAL PRO ALA GLU TYR ALA ALA GLU PHE ALA THR SEQRES 23 A 433 ALA THR ILE ASP ALA VAL LEU ASP CYS PRO GLU VAL TRP SEQRES 24 A 433 GLY VAL THR TRP TRP CYS SER HIS ASP VAL ASP ARG ARG SEQRES 25 A 433 LEU ALA ASP PHE PRO GLU LEU GLU TYR SER LEU GLY LEU SEQRES 26 A 433 LEU THR GLN ASP ARG ARG VAL LYS PRO ALA GLY ARG ALA SEQRES 27 A 433 VAL ALA GLU ALA VAL ARG ARG TRP ARG THR GLU THR PRO SEQRES 28 A 433 ALA PRO ARG PRO ARG THR THR ALA LEU VAL VAL ASP VAL SEQRES 29 A 433 GLY PRO GLY ASP GLN ALA PRO ALA ARG SER VAL CYS ALA SEQRES 30 A 433 PRO GLY GLY ALA VAL PHE GLU ALA PHE MET ARG LEU THR SEQRES 31 A 433 ALA GLN GLY ALA ARG PRO THR THR VAL LEU ALA GLU HIS SEQRES 32 A 433 ALA THR ASP ALA ASP HIS LEU ALA ALA ARG GLY ILE THR SEQRES 33 A 433 GLU VAL VAL THR PRO HIS ASP VAL HIS LEU GLU HIS HIS SEQRES 34 A 433 HIS HIS HIS HIS HET NAG A 501 30 HET AE3 A 502 9 HET EDO A 503 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM AE3 2-(2-ETHOXYETHOXY)ETHANOL HETNAM EDO 1,2-ETHANEDIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NAG C8 H15 N O6 FORMUL 3 AE3 C6 H14 O3 FORMUL 4 EDO C2 H6 O2 FORMUL 5 HOH *344(H2 O) HELIX 1 AA1 GLY A 25 PHE A 33 5 9 HELIX 2 AA2 ASP A 34 ALA A 47 1 14 HELIX 3 AA3 LEU A 58 GLN A 63 1 6 HELIX 4 AA4 ARG A 70 ARG A 87 1 18 HELIX 5 AA5 PRO A 107 ARG A 115 5 9 HELIX 6 AA6 ASP A 121 ALA A 140 1 20 HELIX 7 AA7 ILE A 154 SER A 158 5 5 HELIX 8 AA8 THR A 169 ALA A 188 1 20 HELIX 9 AA9 ASP A 199 LEU A 204 1 6 HELIX 10 AB1 THR A 210 ILE A 217 1 8 HELIX 11 AB2 TRP A 226 ASN A 229 5 4 HELIX 12 AB3 GLY A 230 GLY A 236 1 7 HELIX 13 AB4 SER A 239 ALA A 255 1 17 HELIX 14 AB5 PRO A 277 GLU A 279 5 3 HELIX 15 AB6 TYR A 280 LEU A 293 1 14 HELIX 16 AB7 PRO A 317 SER A 322 1 6 HELIX 17 AB8 LYS A 333 GLU A 349 1 17 HELIX 18 AB9 ALA A 372 ALA A 377 5 6 HELIX 19 AC1 GLY A 380 GLY A 393 1 14 HELIX 20 AC2 GLU A 402 ALA A 404 5 3 HELIX 21 AC3 ASP A 406 GLY A 414 1 9 HELIX 22 AC4 THR A 420 HIS A 425 1 6 SHEET 1 AA1 9 ARG A 15 ASN A 19 0 SHEET 2 AA1 9 HIS A 52 VAL A 55 1 O ARG A 54 N VAL A 18 SHEET 3 AA1 9 ASP A 90 ASP A 94 1 O ASP A 90 N VAL A 53 SHEET 4 AA1 9 PHE A 145 ASN A 152 1 O LEU A 146 N VAL A 91 SHEET 5 AA1 9 LEU A 194 ALA A 196 1 O LEU A 194 N MET A 148 SHEET 6 AA1 9 THR A 221 SER A 225 1 O ALA A 222 N HIS A 195 SHEET 7 AA1 9 VAL A 264 VAL A 269 1 O TRP A 265 N THR A 221 SHEET 8 AA1 9 VAL A 298 TRP A 303 1 O TRP A 299 N VAL A 264 SHEET 9 AA1 9 ARG A 15 ASN A 19 1 N ASN A 19 O TRP A 303 SHEET 1 AA2 2 HIS A 99 LEU A 100 0 SHEET 2 AA2 2 PHE A 103 ASP A 104 -1 O PHE A 103 N LEU A 100 SHEET 1 AA3 3 THR A 397 LEU A 400 0 SHEET 2 AA3 3 THR A 358 VAL A 362 1 N VAL A 362 O VAL A 399 SHEET 3 AA3 3 GLU A 417 VAL A 419 1 O GLU A 417 N ALA A 359 CISPEP 1 GLN A 97 GLY A 98 0 13.10 CISPEP 2 HIS A 160 PRO A 161 0 3.17 CISPEP 3 ALA A 273 PRO A 274 0 2.39 CISPEP 4 TRP A 304 CYS A 305 0 9.08 SITE 1 AC1 16 HIS A 99 SER A 102 TRP A 113 GLU A 153 SITE 2 AC1 16 GLN A 156 TRP A 226 PHE A 228 AE3 A 502 SITE 3 AC1 16 HOH A 603 HOH A 613 HOH A 622 HOH A 623 SITE 4 AC1 16 HOH A 642 HOH A 725 HOH A 737 HOH A 774 SITE 1 AC2 2 ASP A 315 NAG A 501 SITE 1 AC3 1 THR A 390 CRYST1 47.151 115.761 159.570 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021208 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008638 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006267 0.00000