HEADER METAL TRANSPORT 21-FEB-21 7LU8 TITLE STRUCTURE OF THE CRYPTIC HMA DOMAIN OF THE HUMAN COPPER TRANSPORTER TITLE 2 ATP7A COMPND MOL_ID: 1; COMPND 2 MOLECULE: COPPER-TRANSPORTING ATPASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: COPPER PUMP 1,MENKES DISEASE-ASSOCIATED PROTEIN; COMPND 5 EC: 7.2.2.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ATP7A, MC1, MNK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ARCTIC EXPRESS DE3; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PTYB12 KEYWDS COPPER TRANSPORT, HEAVY METAL ASSOCIATED DOMAIN, ATP7A, MEMBRANE KEYWDS 2 TRANSPORTER, METAL TRANSPORT EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.LEE,E.E.UHLEMANN,M.TONELLI,O.Y.DMITRIEV REVDAT 4 15-MAY-24 7LU8 1 REMARK REVDAT 3 14-JUN-23 7LU8 1 REMARK REVDAT 2 10-NOV-21 7LU8 1 JRNL REVDAT 1 15-SEP-21 7LU8 0 JRNL AUTH E.E.UHLEMANN,W.LEE,M.TONELLI,O.Y.DMITRIEV JRNL TITL AT SIXES AND SEVENS: CRYPTIC DOMAIN IN THE METAL BINDING JRNL TITL 2 CHAIN OF THE HUMAN COPPER TRANSPORTER ATP7A. JRNL REF BIOPHYS.J. V. 120 4600 2021 JRNL REFN ESSN 1542-0086 JRNL PMID 34461106 JRNL DOI 10.1016/J.BPJ.2021.08.029 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: TORSION ANGLE DYNAMICS REMARK 4 REMARK 4 7LU8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB. REMARK 100 THE DEPOSITION ID IS D_1000253136. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 210 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.35 MM [U-13C; U-15N] HMA2A, 50 REMARK 210 MM HEPES, 150 MM SODIUM CHLORIDE, REMARK 210 5 MM TCEP, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCA; 3D REMARK 210 HNCACB; 3D 1H-15N NOESY; 3D REMARK 210 CBCA(CO)NH REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III; UNIFORM NMR SYSTEM REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR, NMRPIPE, APES, NMRFAM REMARK 210 -SPARKY, I-PINE, CS-ROSETTA, REMARK 210 PONDEROSA-C/S, AUDANA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 2000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 40 99.13 -66.72 REMARK 500 1 GLU A 65 126.77 0.93 REMARK 500 2 THR A 17 -32.37 -162.02 REMARK 500 2 PRO A 19 109.25 -55.41 REMARK 500 2 PRO A 40 98.37 -69.99 REMARK 500 3 HIS A 3 161.79 61.97 REMARK 500 3 PRO A 40 99.10 -57.76 REMARK 500 3 LEU A 68 -93.05 76.45 REMARK 500 4 ALA A 14 60.40 67.68 REMARK 500 4 PRO A 40 99.53 -62.61 REMARK 500 5 THR A 17 76.66 48.80 REMARK 500 5 PRO A 40 101.93 -57.29 REMARK 500 5 PRO A 64 -70.33 -40.61 REMARK 500 5 GLU A 65 -146.11 29.15 REMARK 500 5 LEU A 68 91.14 61.67 REMARK 500 6 MET A 4 -39.80 -170.32 REMARK 500 6 THR A 17 156.55 59.25 REMARK 500 6 PRO A 40 96.18 -64.51 REMARK 500 6 LYS A 42 93.52 -60.12 REMARK 500 7 PRO A 40 98.12 -63.87 REMARK 500 8 PRO A 40 98.36 -49.80 REMARK 500 8 LYS A 42 92.74 -64.97 REMARK 500 8 LEU A 73 105.36 59.76 REMARK 500 9 PRO A 40 98.53 -57.99 REMARK 500 9 LYS A 42 92.27 -65.72 REMARK 500 9 SER A 67 119.70 -161.88 REMARK 500 9 LEU A 68 -80.21 -171.83 REMARK 500 10 HIS A 3 33.70 -89.47 REMARK 500 10 ALA A 14 -37.00 -153.58 REMARK 500 10 PRO A 40 99.47 -67.24 REMARK 500 10 GLU A 65 149.49 73.15 REMARK 500 10 LEU A 66 -62.35 -99.46 REMARK 500 11 LEU A 16 22.15 47.94 REMARK 500 11 ASP A 35 165.98 179.26 REMARK 500 11 GLU A 65 141.53 -36.67 REMARK 500 11 LEU A 66 34.40 177.89 REMARK 500 11 LYS A 75 177.81 55.44 REMARK 500 12 ASP A 35 159.53 179.97 REMARK 500 12 PRO A 40 95.62 -68.74 REMARK 500 12 LYS A 42 94.03 -58.73 REMARK 500 12 LEU A 66 -78.06 65.91 REMARK 500 13 HIS A 3 156.52 60.85 REMARK 500 13 LEU A 16 163.42 81.15 REMARK 500 13 PRO A 40 98.38 -66.58 REMARK 500 13 GLU A 65 161.42 58.90 REMARK 500 13 LEU A 73 113.40 64.69 REMARK 500 14 MET A 4 5.90 -150.55 REMARK 500 14 ALA A 14 145.71 -178.57 REMARK 500 14 THR A 17 87.55 69.54 REMARK 500 14 PRO A 40 99.16 -48.22 REMARK 500 REMARK 500 THIS ENTRY HAS 88 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30866 RELATED DB: BMRB REMARK 900 STRUCTURE OF THE CRYPTIC HMA DOMAIN OF THE HUMAN COPPER TRANSPORTER REMARK 900 ATP7A DBREF 7LU8 A 4 76 UNP Q04656 ATP7A_HUMAN 84 156 SEQADV 7LU8 ALA A 1 UNP Q04656 EXPRESSION TAG SEQADV 7LU8 GLY A 2 UNP Q04656 EXPRESSION TAG SEQADV 7LU8 HIS A 3 UNP Q04656 EXPRESSION TAG SEQADV 7LU8 MET A 4 UNP Q04656 LEU 84 CONFLICT SEQRES 1 A 76 ALA GLY HIS MET THR ASP THR LEU PHE LEU THR VAL THR SEQRES 2 A 76 ALA SER LEU THR LEU PRO TRP ASP HIS ILE GLN SER THR SEQRES 3 A 76 LEU LEU LYS THR LYS GLY VAL THR ASP ILE LYS ILE TYR SEQRES 4 A 76 PRO GLN LYS ARG THR VAL ALA VAL THR ILE ILE PRO SER SEQRES 5 A 76 ILE VAL ASN ALA ASN GLN ILE LYS GLU LEU VAL PRO GLU SEQRES 6 A 76 LEU SER LEU ASP THR GLY THR LEU GLU LYS LYS HELIX 1 AA1 PRO A 19 THR A 30 1 12 HELIX 2 AA2 ASN A 55 VAL A 63 1 9 SHEET 1 AA1 3 ASP A 6 THR A 11 0 SHEET 2 AA1 3 THR A 44 ILE A 49 -1 O VAL A 47 N LEU A 8 SHEET 3 AA1 3 VAL A 33 TYR A 39 -1 N ASP A 35 O THR A 48 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1