data_7LV2 # _entry.id 7LV2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7LV2 pdb_00007lv2 10.2210/pdb7lv2/pdb WWPDB D_1000255060 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-03-17 2 'Structure model' 1 1 2021-03-24 3 'Structure model' 1 2 2024-03-06 4 'Structure model' 1 3 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' citation 5 3 'Structure model' database_2 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 3 'Structure model' '_citation.journal_id_ISSN' 4 3 'Structure model' '_database_2.pdbx_DOI' 5 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7LV2 _pdbx_database_status.recvd_initial_deposition_date 2021-02-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hou, K.' 1 0000-0003-3869-2076 'Sawaya, M.R.' 2 0000-0003-0874-9043 'Eisenberg, D.S.' 3 0000-0003-2432-5419 'Cascio, D.' 4 0000-0002-3877-6803 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biorxiv _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2692-8205 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Inhibition of amyloid formation of the Nucleoprotein of SARS-CoV-2.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1101/2021.03.05.434000 _citation.pdbx_database_id_PubMed 33688654 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tayeb-Fligelman, E.' 1 ? primary 'Cheng, X.' 2 ? primary 'Tai, C.' 3 ? primary 'Bowler, J.T.' 4 ? primary 'Griner, S.' 5 ? primary 'Sawaya, M.R.' 6 ? primary 'Seidler, P.M.' 7 ? primary 'Jiang, Y.X.' 8 ? primary 'Lu, J.' 9 ? primary 'Rosenberg, G.M.' 10 ? primary 'Salwinski, L.' 11 ? primary 'Abskharon, R.' 12 ? primary 'Zee, C.T.' 13 ? primary 'Hou, K.' 14 ? primary 'Li, Y.' 15 ? primary 'Boyer, D.R.' 16 ? primary 'Murray, K.A.' 17 ? primary 'Falcon, G.' 18 ? primary 'Anderson, D.H.' 19 ? primary 'Cascio, D.' 20 ? primary 'Saelices, L.' 21 ? primary 'Damoiseaux, R.' 22 ? primary 'Guo, F.' 23 ? primary 'Eisenberg, D.S.' 24 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Nucleoprotein GSQASS' 535.507 1 ? ? ? ? 2 water nat water 18.015 3 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'N,Nucleocapsid protein,NC,Protein N' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSQASS _entity_poly.pdbx_seq_one_letter_code_can GSQASS _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLN n 1 4 ALA n 1 5 SER n 1 6 SER n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 6 _pdbx_entity_src_syn.organism_scientific 'Severe acute respiratory syndrome coronavirus 2' _pdbx_entity_src_syn.organism_common_name '2019-nCoV, SARS-CoV-2' _pdbx_entity_src_syn.ncbi_taxonomy_id 2697049 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 179 179 GLY GLY A . n A 1 2 SER 2 180 180 SER SER A . n A 1 3 GLN 3 181 181 GLN GLN A . n A 1 4 ALA 4 182 182 ALA ALA A . n A 1 5 SER 5 183 183 SER SER A . n A 1 6 SER 6 184 184 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 193 HOH HOH A . B 2 HOH 2 202 192 HOH HOH A . B 2 HOH 3 203 191 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 'Jan 31, 2020' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? 'Jan 31, 2020' 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.8.3 3 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 4 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7LV2 _cell.details ? _cell.formula_units_Z ? _cell.length_a 4.770 _cell.length_a_esd ? _cell.length_b 13.600 _cell.length_b_esd ? _cell.length_c 42.440 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LV2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7LV2 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.29 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 4.3 _exptl_crystal.description Needle _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'sodium potassium tartrate, lithium sulfate, TRIS, pH 7.0' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-06-20 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si (111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 15.771 _reflns.entry_id 7LV2 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.300 _reflns.d_resolution_low 12.951 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 809 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 93.200 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.266 _reflns.pdbx_Rmerge_I_obs 0.126 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 3.470 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.874 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.161 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 1.300 1.390 ? 0.690 ? ? ? ? 139 95.900 ? ? ? ? 1.045 ? ? ? ? ? ? ? ? 2.432 ? ? ? ? 1.306 ? ? 1 1 0.567 ? ? 1.390 1.500 ? 1.020 ? ? ? ? 139 97.900 ? ? ? ? 0.734 ? ? ? ? ? ? ? ? 2.295 ? ? ? ? 0.928 ? ? 2 1 0.636 ? ? 1.500 1.640 ? 2.530 ? ? ? ? 127 94.800 ? ? ? ? 0.340 ? ? ? ? ? ? ? ? 2.299 ? ? ? ? 0.431 ? ? 3 1 0.912 ? ? 1.640 1.840 ? 2.270 ? ? ? ? 99 96.100 ? ? ? ? 0.346 ? ? ? ? ? ? ? ? 2.303 ? ? ? ? 0.441 ? ? 4 1 0.911 ? ? 1.840 2.120 ? 5.040 ? ? ? ? 103 89.600 ? ? ? ? 0.120 ? ? ? ? ? ? ? ? 2.282 ? ? ? ? 0.152 ? ? 5 1 0.987 ? ? 2.120 2.600 ? 6.130 ? ? ? ? 91 97.800 ? ? ? ? 0.122 ? ? ? ? ? ? ? ? 2.176 ? ? ? ? 0.153 ? ? 6 1 0.982 ? ? 2.600 3.680 ? 7.780 ? ? ? ? 66 85.700 ? ? ? ? 0.057 ? ? ? ? ? ? ? ? 2.015 ? ? ? ? 0.075 ? ? 7 1 0.995 ? ? 3.680 12.951 ? 9.620 ? ? ? ? 45 76.300 ? ? ? ? 0.051 ? ? ? ? ? ? ? ? 2.000 ? ? ? ? 0.066 ? ? 8 1 0.998 ? ? # _refine.aniso_B[1][1] -1.126 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] 1.716 _refine.aniso_B[2][3] -0.000 _refine.aniso_B[3][3] -0.590 _refine.B_iso_max ? _refine.B_iso_mean 10.668 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.956 _refine.correlation_coeff_Fo_to_Fc_free 0.980 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7LV2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.301 _refine.ls_d_res_low 12.951 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 798 _refine.ls_number_reflns_R_free 79 _refine.ls_number_reflns_R_work 719 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.438 _refine.ls_percent_reflns_R_free 9.900 _refine.ls_R_factor_all 0.248 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2420 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2488 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'ideal beta strand AAAAAA' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.102 _refine.pdbx_overall_ESU_R_Free 0.085 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.301 _refine_hist.d_res_low 12.951 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 40 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 37 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.017 0.014 45 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.035 0.019 39 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.751 1.630 62 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 6.804 1.726 96 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.301 5.000 9 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 41.435 30.000 1 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 11.137 15.000 7 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 0.129 0.200 7 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 0.020 63 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 9 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.058 0.200 1 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.220 0.200 18 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.133 0.200 21 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.176 0.200 32 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.037 0.200 2 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.111 0.200 7 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.236 0.200 14 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.201 0.200 5 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 1.662 1.063 28 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.411 1.020 27 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.388 1.510 33 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.480 1.547 34 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.371 1.239 17 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.676 1.164 16 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 3.762 1.831 26 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 3.361 1.812 26 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 3.378 11.779 39 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 3.631 10.969 38 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.301 1.334 56 . 5 50 98.2143 . 0.460 . 0.728 . 0.441 . . . . . 0.429 . 20 . 0.680 0.527 'X-RAY DIFFRACTION' 1.334 1.371 58 . 6 51 98.2759 . 0.442 . 0.477 . 0.438 . . . . . 0.441 . 20 . 0.599 0.287 'X-RAY DIFFRACTION' 1.371 1.410 55 . 5 44 89.0909 . 0.385 . 0.203 . 0.402 . . . . . 0.398 . 20 . 0.689 0.486 'X-RAY DIFFRACTION' 1.410 1.453 55 . 5 49 98.1818 . 0.446 . 0.474 . 0.443 . . . . . 0.455 . 20 . 0.651 0.438 'X-RAY DIFFRACTION' 1.453 1.500 58 . 6 52 100.0000 . 0.386 . 0.554 . 0.373 . . . . . 0.355 . 20 . 0.737 0.236 'X-RAY DIFFRACTION' 1.500 1.552 59 . 6 53 100.0000 . 0.299 . 0.277 . 0.301 . . . . . 0.287 . 20 . 0.815 0.636 'X-RAY DIFFRACTION' 1.552 1.609 50 . 5 39 88.0000 . 0.296 . 0.237 . 0.302 . . . . . 0.293 . 20 . 0.915 0.789 'X-RAY DIFFRACTION' 1.609 1.674 42 . 4 37 97.6190 . 0.231 . 0.210 . 0.232 . . . . . 0.213 . 20 . 0.918 0.419 'X-RAY DIFFRACTION' 1.674 1.747 41 . 4 35 95.1219 . 0.330 . 0.494 . 0.300 . . . . . 0.266 . 20 . 0.889 0.736 'X-RAY DIFFRACTION' 1.747 1.831 43 . 4 38 97.6744 . 0.391 . 0.324 . 0.401 . . . . . 0.367 . 20 . 0.831 0.916 'X-RAY DIFFRACTION' 1.831 1.927 41 . 2 30 78.0488 . 0.258 . 0.155 . 0.275 . . . . . 0.249 . 20 . 0.925 0.900 'X-RAY DIFFRACTION' 1.927 2.042 42 . 4 37 97.6190 . 0.218 . 0.483 . 0.202 . . . . . 0.188 . 20 . 0.957 0.842 'X-RAY DIFFRACTION' 2.042 2.179 40 . 4 36 100.0000 . 0.209 . 0.082 . 0.218 . . . . . 0.196 . 20 . 0.957 0.962 'X-RAY DIFFRACTION' 2.179 2.348 47 . 5 42 100.0000 . 0.234 . 0.313 . 0.225 . . . . . 0.209 . 20 . 0.919 0.863 'X-RAY DIFFRACTION' 2.348 2.563 31 . 2 27 93.5484 . 0.175 . 0.300 . 0.171 . . . . . 0.160 . 20 . 0.967 0.774 'X-RAY DIFFRACTION' 2.563 2.852 30 . 3 25 93.3333 . 0.207 . 0.417 . 0.192 . . . . . 0.191 . 20 . 0.982 0.965 'X-RAY DIFFRACTION' 2.852 3.267 26 . 3 20 88.4615 . 0.125 . 0.534 . 0.111 . . . . . 0.132 . 20 . 0.990 0.611 'X-RAY DIFFRACTION' 3.267 3.939 30 . 2 23 83.3333 . 0.143 . 0.073 . 0.165 . . . . . 0.163 . 20 . 0.980 0.993 'X-RAY DIFFRACTION' 3.939 5.329 26 . 3 21 92.3077 . 0.153 . 0.085 . 0.171 . . . . . 0.181 . 20 . 0.981 0.997 'X-RAY DIFFRACTION' 5.329 12.951 13 . 1 9 76.9231 . 0.358 . 0.470 . 0.355 . . . . . 0.290 . 20 . 0.961 . # _struct.entry_id 7LV2 _struct.title 'GSQASS segment from the Nucleoprotein of SARS-CoV-2, residues 179-184' _struct.pdbx_model_details 'Amyloid Fibril' _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7LV2 _struct_keywords.text 'amyloid fibril, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NCAP_SARS2 _struct_ref.pdbx_db_accession P0DTC9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code GSQASS _struct_ref.pdbx_align_begin 179 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7LV2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 6 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0DTC9 _struct_ref_seq.db_align_beg 179 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 184 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 179 _struct_ref_seq.pdbx_auth_seq_align_end 184 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B 1 2 A,B 1 3 A,B 1 4 A,B 1 5 A,B 1 6 A,B 1 7 A,B 1 8 A,B 1 9 A,B 1 10 A,B 1 11 A,B 1 12 A,B 1 13 A,B 1 14 A,B 1 15 A,B 1 16 A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details 'The biological unit is a fibril with indefinite length' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_455 x-1,y,z 1.0000000000 0.0000000000 0.0000000000 -4.7700000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 1_655 x+1,y,z 1.0000000000 0.0000000000 0.0000000000 4.7700000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 1_355 x-2,y,z 1.0000000000 0.0000000000 0.0000000000 -9.5400000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5 'crystal symmetry operation' 1_755 x+2,y,z 1.0000000000 0.0000000000 0.0000000000 9.5400000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 6 'crystal symmetry operation' 1_255 x-3,y,z 1.0000000000 0.0000000000 0.0000000000 -14.3100000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 7 'crystal symmetry operation' 1_855 x+3,y,z 1.0000000000 0.0000000000 0.0000000000 14.3100000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 8 'crystal symmetry operation' 1_155 x-4,y,z 1.0000000000 0.0000000000 0.0000000000 -19.0800000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 9 'crystal symmetry operation' 4_556 x+1/2,-y+1/2,-z+1 1.0000000000 0.0000000000 0.0000000000 2.3850000000 0.0000000000 -1.0000000000 0.0000000000 6.8000000000 0.0000000000 0.0000000000 -1.0000000000 42.4400000000 10 'crystal symmetry operation' 4_456 x-1/2,-y+1/2,-z+1 1.0000000000 0.0000000000 0.0000000000 -2.3850000000 0.0000000000 -1.0000000000 0.0000000000 6.8000000000 0.0000000000 0.0000000000 -1.0000000000 42.4400000000 11 'crystal symmetry operation' 4_656 x+3/2,-y+1/2,-z+1 1.0000000000 0.0000000000 0.0000000000 7.1550000000 0.0000000000 -1.0000000000 0.0000000000 6.8000000000 0.0000000000 0.0000000000 -1.0000000000 42.4400000000 12 'crystal symmetry operation' 4_356 x-3/2,-y+1/2,-z+1 1.0000000000 0.0000000000 0.0000000000 -7.1550000000 0.0000000000 -1.0000000000 0.0000000000 6.8000000000 0.0000000000 0.0000000000 -1.0000000000 42.4400000000 13 'crystal symmetry operation' 4_756 x+5/2,-y+1/2,-z+1 1.0000000000 0.0000000000 0.0000000000 11.9250000000 0.0000000000 -1.0000000000 0.0000000000 6.8000000000 0.0000000000 0.0000000000 -1.0000000000 42.4400000000 14 'crystal symmetry operation' 4_256 x-5/2,-y+1/2,-z+1 1.0000000000 0.0000000000 0.0000000000 -11.9250000000 0.0000000000 -1.0000000000 0.0000000000 6.8000000000 0.0000000000 0.0000000000 -1.0000000000 42.4400000000 15 'crystal symmetry operation' 4_156 x-7/2,-y+1/2,-z+1 1.0000000000 0.0000000000 0.0000000000 -16.6950000000 0.0000000000 -1.0000000000 0.0000000000 6.8000000000 0.0000000000 0.0000000000 -1.0000000000 42.4400000000 16 'crystal symmetry operation' 4_856 x+7/2,-y+1/2,-z+1 1.0000000000 0.0000000000 0.0000000000 16.6950000000 0.0000000000 -1.0000000000 0.0000000000 6.8000000000 0.0000000000 0.0000000000 -1.0000000000 42.4400000000 # _phasing.method MR # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 GLN N N N N 14 GLN CA C N S 15 GLN C C N N 16 GLN O O N N 17 GLN CB C N N 18 GLN CG C N N 19 GLN CD C N N 20 GLN OE1 O N N 21 GLN NE2 N N N 22 GLN OXT O N N 23 GLN H H N N 24 GLN H2 H N N 25 GLN HA H N N 26 GLN HB2 H N N 27 GLN HB3 H N N 28 GLN HG2 H N N 29 GLN HG3 H N N 30 GLN HE21 H N N 31 GLN HE22 H N N 32 GLN HXT H N N 33 GLY N N N N 34 GLY CA C N N 35 GLY C C N N 36 GLY O O N N 37 GLY OXT O N N 38 GLY H H N N 39 GLY H2 H N N 40 GLY HA2 H N N 41 GLY HA3 H N N 42 GLY HXT H N N 43 HOH O O N N 44 HOH H1 H N N 45 HOH H2 H N N 46 SER N N N N 47 SER CA C N S 48 SER C C N N 49 SER O O N N 50 SER CB C N N 51 SER OG O N N 52 SER OXT O N N 53 SER H H N N 54 SER H2 H N N 55 SER HA H N N 56 SER HB2 H N N 57 SER HB3 H N N 58 SER HG H N N 59 SER HXT H N N 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 GLN N CA sing N N 13 GLN N H sing N N 14 GLN N H2 sing N N 15 GLN CA C sing N N 16 GLN CA CB sing N N 17 GLN CA HA sing N N 18 GLN C O doub N N 19 GLN C OXT sing N N 20 GLN CB CG sing N N 21 GLN CB HB2 sing N N 22 GLN CB HB3 sing N N 23 GLN CG CD sing N N 24 GLN CG HG2 sing N N 25 GLN CG HG3 sing N N 26 GLN CD OE1 doub N N 27 GLN CD NE2 sing N N 28 GLN NE2 HE21 sing N N 29 GLN NE2 HE22 sing N N 30 GLN OXT HXT sing N N 31 GLY N CA sing N N 32 GLY N H sing N N 33 GLY N H2 sing N N 34 GLY CA C sing N N 35 GLY CA HA2 sing N N 36 GLY CA HA3 sing N N 37 GLY C O doub N N 38 GLY C OXT sing N N 39 GLY OXT HXT sing N N 40 HOH O H1 sing N N 41 HOH O H2 sing N N 42 SER N CA sing N N 43 SER N H sing N N 44 SER N H2 sing N N 45 SER CA C sing N N 46 SER CA CB sing N N 47 SER CA HA sing N N 48 SER C O doub N N 49 SER C OXT sing N N 50 SER CB OG sing N N 51 SER CB HB2 sing N N 52 SER CB HB3 sing N N 53 SER OG HG sing N N 54 SER OXT HXT sing N N 55 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Department of Energy (DOE, United States)' 'United States' DE-FC02-02ER63421 1 'National Science Foundation (NSF, United States)' 'United States' 'MCB 1616265' 2 'National Institutes of Health/National Institute on Aging (NIH/NIA)' 'United States' 'R01 AG048120' 3 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'ideal beta strand AAAAAA' # _atom_sites.entry_id 7LV2 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.209644 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.073529 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023563 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 C 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 H 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 N 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 O 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 # loop_