HEADER ALLERGEN 25-FEB-21 7LVF TITLE JUG R 2 LEADER SEQUENCE RESIDUES 1-57 COMPND MOL_ID: 1; COMPND 2 MOLECULE: VICILIN JUG R 2.0101; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LEADER SEQUENCE, RESIDUES 1-57; COMPND 5 SYNONYM: 7S GLOBULIN,7S SEED STORAGE PROTEIN,ALLERGEN JUG R 2,VICILIN COMPND 6 JUG R 2,VICILIN-LIKE JUG R 2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: JUGLANS REGIA; SOURCE 3 ORGANISM_COMMON: ENGLISH WALNUT; SOURCE 4 ORGANISM_TAXID: 51240; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS SEED STORAGE, ALLERGEN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.A.MUELLER,A.C.Y.FOO,E.F.DEROSE REVDAT 4 14-JUN-23 7LVF 1 REMARK REVDAT 3 09-MAR-22 7LVF 1 JRNL REVDAT 2 23-FEB-22 7LVF 1 JRNL REVDAT 1 02-FEB-22 7LVF 0 JRNL AUTH A.C.Y.FOO,J.B.NESBIT,S.A.Y.GIPSON,H.CHENG,P.BUSHEL, JRNL AUTH 2 E.F.DEROSE,C.H.SCHEIN,S.S.TEUBER,B.K.HURLBURT,S.J.MALEKI, JRNL AUTH 3 G.A.MUELLER JRNL TITL STRUCTURE, IMMUNOGENICITY, AND IGE CROSS-REACTIVITY AMONG JRNL TITL 2 WALNUT AND PEANUT VICILIN-BURIED PEPTIDES. JRNL REF J.AGRIC.FOOD CHEM. V. 70 2389 2022 JRNL REFN ESSN 1520-5118 JRNL PMID 35139305 JRNL DOI 10.1021/ACS.JAFC.1C07225 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7LVF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1000251778. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.15 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 50 UM SODIUM REMARK 210 TRIMETHYLSILYLPROPANESULFONATE, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C REMARK 210 NOESY; 3D HNCO; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D C(CO)NH; 3D H(CCO) REMARK 210 NH; 2D 1H-15N HSQC; 2D 1H-13C REMARK 210 HSQC ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW, X-PLOR NIH, TALOS, REMARK 210 CYANA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 54 127.07 62.98 REMARK 500 2 ARG A 13 140.46 62.38 REMARK 500 2 GLN A 31 58.80 -172.38 REMARK 500 3 ARG A 13 150.28 -45.23 REMARK 500 4 GLU A 55 81.85 -157.30 REMARK 500 5 ARG A 13 -43.82 -139.62 REMARK 500 5 GLN A 54 98.97 54.38 REMARK 500 5 GLU A 56 65.57 -155.94 REMARK 500 6 GLU A 10 98.75 55.54 REMARK 500 6 GLN A 31 28.03 -176.23 REMARK 500 6 GLU A 56 13.85 58.73 REMARK 500 7 GLU A 56 -18.12 76.39 REMARK 500 8 ARG A 13 123.15 63.43 REMARK 500 9 GLU A 10 -69.79 -133.98 REMARK 500 9 GLN A 31 28.44 -152.24 REMARK 500 9 GLN A 54 -83.50 61.62 REMARK 500 9 GLU A 55 59.50 -145.65 REMARK 500 11 GLU A 10 100.04 51.24 REMARK 500 11 ARG A 13 102.74 58.52 REMARK 500 11 GLN A 31 -48.56 -167.71 REMARK 500 11 GLU A 55 26.01 41.32 REMARK 500 12 GLN A 31 -25.92 -141.60 REMARK 500 12 GLU A 55 95.76 -176.28 REMARK 500 13 ASP A 8 47.81 -95.87 REMARK 500 13 GLN A 31 97.17 26.72 REMARK 500 14 GLN A 31 -59.88 -167.37 REMARK 500 15 GLN A 29 64.77 -100.51 REMARK 500 16 ARG A 4 14.47 -161.67 REMARK 500 16 PRO A 12 49.95 -75.29 REMARK 500 17 ARG A 2 -77.05 -167.79 REMARK 500 17 ARG A 13 -69.98 66.58 REMARK 500 17 GLN A 54 86.06 24.62 REMARK 500 18 GLU A 10 -111.76 46.80 REMARK 500 18 ASN A 11 75.91 44.07 REMARK 500 18 GLN A 31 65.20 -155.76 REMARK 500 18 GLN A 54 178.65 53.59 REMARK 500 18 GLU A 56 46.25 -140.16 REMARK 500 19 ARG A 2 145.30 61.62 REMARK 500 19 ARG A 4 128.04 72.55 REMARK 500 19 ARG A 13 154.50 -49.08 REMARK 500 19 GLU A 55 82.87 -162.54 REMARK 500 20 ASP A 8 53.33 -90.21 REMARK 500 20 ARG A 13 153.23 60.64 REMARK 500 20 GLN A 54 160.77 59.58 REMARK 500 20 GLU A 55 84.61 70.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30870 RELATED DB: BMRB REMARK 900 JUG R 2 LEADER SEQUENCE RESIDUES 1-57 DBREF 7LVF A 2 57 UNP Q9SEW4 VCL2_JUGRE 1 56 SEQADV 7LVF MET A 1 UNP Q9SEW4 EXPRESSION TAG SEQRES 1 A 57 MET ARG GLY ARG ASP ASP ASP ASP GLU GLU ASN PRO ARG SEQRES 2 A 57 ASP PRO ARG GLU GLN TYR ARG GLN CYS GLN GLU TYR CYS SEQRES 3 A 57 ARG ARG GLN GLY GLN GLY GLN ARG GLN GLN GLN GLN CYS SEQRES 4 A 57 GLN ILE ARG CYS GLU GLU ARG LEU GLU GLU ASP GLN ARG SEQRES 5 A 57 SER GLN GLU GLU ARG HELIX 1 AA1 ASP A 14 GLN A 29 1 16 HELIX 2 AA2 GLY A 32 GLN A 54 1 23 SSBOND 1 CYS A 22 CYS A 43 1555 1555 2.01 SSBOND 2 CYS A 26 CYS A 39 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1