HEADER VIRAL PROTEIN 15-MAR-21 7M1V TITLE STRUCTURE OF ZIKA VIRUS NS2B-NS3 PROTEASE MUTANT BINDING THE COMPOUND TITLE 2 NSC86314 IN THE SUPER-OPEN CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CORE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ENVELOPE PROTEIN E,FLAVIVIRIN PROTEASE NS2B REGULATORY COMPND 5 SUBUNIT,FLAVIVIRIN PROTEASE NS3 CATALYTIC SUBUNIT,GENOME POLYPROTEIN, COMPND 6 MATRIX PROTEIN,NON-STRUCTURAL PROTEIN 1,NON-STRUCTURAL PROTEIN 2A, COMPND 7 NON-STRUCTURAL PROTEIN 2B,NON-STRUCTURAL PROTEIN 3,NON-STRUCTURAL COMPND 8 PROTEIN 4A,NON-STRUCTURAL PROTEIN 4B,PEPTIDE 2K,PEPTIDE PR,PROTEIN COMPND 9 PRM,RNA-DIRECTED RNA POLYMERASE NS5,SERINE PROTEASE NS3,SERINE COMPND 10 PROTEASE SUBUNIT NS2B,SMALL ENVELOPE PROTEIN M,ENVELOPE PROTEIN E, COMPND 11 FLAVIVIRIN PROTEASE NS2B REGULATORY SUBUNIT,FLAVIVIRIN PROTEASE NS3 COMPND 12 CATALYTIC SUBUNIT,GENOME POLYPROTEIN,MATRIX PROTEIN,NON-STRUCTURAL COMPND 13 PROTEIN 1,NON-STRUCTURAL PROTEIN 2A,NON-STRUCTURAL PROTEIN 2B,NON- COMPND 14 STRUCTURAL PROTEIN 3,NON-STRUCTURAL PROTEIN 4A,NON-STRUCTURAL PROTEIN COMPND 15 4B,PEPTIDE 2K,PEPTIDE PR,PROTEIN PRM,RNA-DIRECTED RNA POLYMERASE NS5, COMPND 16 SERINE PROTEASE NS3,SERINE PROTEASE SUBUNIT NS2B,SMALL ENVELOPE COMPND 17 PROTEIN M; COMPND 18 EC: 3.4.21.91,3.6.1.15,3.6.4.13; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZIKA VIRUS; SOURCE 3 ORGANISM_COMMON: ZIKV; SOURCE 4 ORGANISM_TAXID: 64320; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 1354003 KEYWDS FLAVIVIRUS, SERINE PROTEASE, ZIKA VIRUS, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.E.ALESHIN,S.A.SHIRYAEV,R.C.LIDDINGTON REVDAT 2 18-OCT-23 7M1V 1 REMARK REVDAT 1 21-APR-21 7M1V 0 JRNL AUTH A.E.ALESHIN,S.A.SHIRYAEV,R.C.LIDDINGTON JRNL TITL TO BE PROVIDED JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 36353 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : THROUGHOUT RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1872 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2490 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 59 REMARK 3 SOLVENT ATOMS : 300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7M1V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1000255506. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JAN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.19499 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 12M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38226 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 33.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.02300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.07600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6UM3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 UL OF 0.3 MM PROTEIN AND 0.4 MM OF REMARK 280 THE COMPOUND NSC83614 IN 100 MM NACL, 20 MM TRIS-CL BUFFER (PH REMARK 280 8.0), WAS MIXED WITH 0.2 UL OF THE WELL SOLUTION., VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 43 REMARK 465 PRO A 44 REMARK 465 GLY A 965 REMARK 465 ASN A 966 REMARK 465 SER A 967 REMARK 465 PRO A 968 REMARK 465 ARG A 969 REMARK 465 LEU A 970 REMARK 465 ASP A 971 REMARK 465 VAL A 972 REMARK 465 ALA A 973 REMARK 465 LEU A 974 REMARK 465 ASP A 975 REMARK 465 GLU A 976 REMARK 465 SER A 977 REMARK 465 GLY A 978 REMARK 465 ASP A 979 REMARK 465 PHE A 980 REMARK 465 SER A 981 REMARK 465 LEU A 982 REMARK 465 VAL A 983 REMARK 465 GLU A 984 REMARK 465 ASP A 985 REMARK 465 ASP A 986 REMARK 465 GLY A 987 REMARK 465 PRO A 988 REMARK 465 PRO A 989 REMARK 465 MET A 990 REMARK 465 ALA A 991 REMARK 465 GLY A 992 REMARK 465 GLY A 993 REMARK 465 GLY A 994 REMARK 465 GLY A 995 REMARK 465 SER A 996 REMARK 465 GLY A 997 REMARK 465 GLY A 998 REMARK 465 GLY A 999 REMARK 465 GLY A 1000 REMARK 465 SER A 1001 REMARK 465 GLY A 1002 REMARK 465 ALA A 1003 REMARK 465 LEU A 1004 REMARK 465 TRP A 1005 REMARK 465 ASP A 1006 REMARK 465 VAL A 1007 REMARK 465 PRO A 1008 REMARK 465 ALA A 1009 REMARK 465 PRO A 1010 REMARK 465 LYS A 1011 REMARK 465 GLU A 1012 REMARK 465 VAL A 1013 REMARK 465 LYS A 1014 REMARK 465 LYS A 1015 REMARK 465 GLY A 1016 REMARK 465 GLU A 1017 REMARK 465 GLY B 43 REMARK 465 PRO B 44 REMARK 465 LEU B 45 REMARK 465 GLY B 46 REMARK 465 GLY B 965 REMARK 465 ASN B 966 REMARK 465 SER B 967 REMARK 465 PRO B 968 REMARK 465 ARG B 969 REMARK 465 LEU B 970 REMARK 465 ASP B 971 REMARK 465 VAL B 972 REMARK 465 ALA B 973 REMARK 465 LEU B 974 REMARK 465 ASP B 975 REMARK 465 GLU B 976 REMARK 465 SER B 977 REMARK 465 GLY B 978 REMARK 465 ASP B 979 REMARK 465 PHE B 980 REMARK 465 SER B 981 REMARK 465 LEU B 982 REMARK 465 VAL B 983 REMARK 465 GLU B 984 REMARK 465 ASP B 985 REMARK 465 ASP B 986 REMARK 465 GLY B 987 REMARK 465 PRO B 988 REMARK 465 PRO B 989 REMARK 465 MET B 990 REMARK 465 ALA B 991 REMARK 465 GLY B 992 REMARK 465 GLY B 993 REMARK 465 GLY B 994 REMARK 465 GLY B 995 REMARK 465 SER B 996 REMARK 465 GLY B 997 REMARK 465 GLY B 998 REMARK 465 GLY B 999 REMARK 465 GLY B 1000 REMARK 465 SER B 1001 REMARK 465 GLY B 1002 REMARK 465 ALA B 1003 REMARK 465 LEU B 1004 REMARK 465 TRP B 1005 REMARK 465 ASP B 1006 REMARK 465 VAL B 1007 REMARK 465 PRO B 1008 REMARK 465 ALA B 1009 REMARK 465 PRO B 1010 REMARK 465 LYS B 1011 REMARK 465 GLU B 1012 REMARK 465 VAL B 1013 REMARK 465 LYS B 1014 REMARK 465 LYS B 1015 REMARK 465 GLY B 1016 REMARK 465 GLU B 1017 REMARK 465 GLY B 1159 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A1080 -10.37 85.94 REMARK 500 HIS A1092 -25.73 -145.16 REMARK 500 HIS A1092 -46.82 -132.56 REMARK 500 ALA A1127 56.33 -98.78 REMARK 500 SER B1080 -7.27 85.27 REMARK 500 HIS B1092 -26.93 -142.84 REMARK 500 ASP B1129 79.23 -102.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THE OBSERVED LIGAND BINDING WAS NOT INVESTIGATED TO BE INHIBITORY REMARK 600 FOR THE WILD TYPE PROTEASE. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6UM3 RELATED DB: PDB REMARK 900 6UM3 IS ALSO A MUTANT OF ZIKVPRO WITH A DISULFIDE BOND STABILIZING REMARK 900 THE SUPEROPEN CONFORMATION DBREF1 7M1V A 48 990 UNP A0A219YLK5_ZIKV DBREF2 7M1V A A0A219YLK5 1416 1462 DBREF1 7M1V A 1002 1159 UNP A0A219YLK5_ZIKV DBREF2 7M1V A A0A219YLK5 1500 1657 DBREF1 7M1V B 48 990 UNP A0A219YLK5_ZIKV DBREF2 7M1V B A0A219YLK5 1416 1462 DBREF1 7M1V B 1002 1159 UNP A0A219YLK5_ZIKV DBREF2 7M1V B A0A219YLK5 1500 1657 SEQADV 7M1V GLY A 43 UNP A0A219YLK EXPRESSION TAG SEQADV 7M1V PRO A 44 UNP A0A219YLK EXPRESSION TAG SEQADV 7M1V LEU A 45 UNP A0A219YLK EXPRESSION TAG SEQADV 7M1V GLY A 46 UNP A0A219YLK EXPRESSION TAG SEQADV 7M1V SER A 47 UNP A0A219YLK EXPRESSION TAG SEQADV 7M1V VAL A 67 UNP A0A219YLK ILE 1435 CONFLICT SEQADV 7M1V ALA A 991 UNP A0A219YLK LINKER SEQADV 7M1V GLY A 992 UNP A0A219YLK LINKER SEQADV 7M1V GLY A 993 UNP A0A219YLK LINKER SEQADV 7M1V GLY A 994 UNP A0A219YLK LINKER SEQADV 7M1V GLY A 995 UNP A0A219YLK LINKER SEQADV 7M1V SER A 996 UNP A0A219YLK LINKER SEQADV 7M1V GLY A 997 UNP A0A219YLK LINKER SEQADV 7M1V GLY A 998 UNP A0A219YLK LINKER SEQADV 7M1V GLY A 999 UNP A0A219YLK LINKER SEQADV 7M1V GLY A 1000 UNP A0A219YLK LINKER SEQADV 7M1V SER A 1001 UNP A0A219YLK LINKER SEQADV 7M1V THR A 1030 UNP A0A219YLK LEU 1528 CONFLICT SEQADV 7M1V SER A 1031 UNP A0A219YLK LEU 1529 CONFLICT SEQADV 7M1V SER A 1080 UNP A0A219YLK CYS 1578 CONFLICT SEQADV 7M1V CYS A 1088 UNP A0A219YLK ALA 1586 CONFLICT SEQADV 7M1V SER A 1143 UNP A0A219YLK CYS 1641 CONFLICT SEQADV 7M1V CYS A 1157 UNP A0A219YLK LYS 1655 CONFLICT SEQADV 7M1V GLY B 43 UNP A0A219YLK EXPRESSION TAG SEQADV 7M1V PRO B 44 UNP A0A219YLK EXPRESSION TAG SEQADV 7M1V LEU B 45 UNP A0A219YLK EXPRESSION TAG SEQADV 7M1V GLY B 46 UNP A0A219YLK EXPRESSION TAG SEQADV 7M1V SER B 47 UNP A0A219YLK EXPRESSION TAG SEQADV 7M1V VAL B 67 UNP A0A219YLK ILE 1435 CONFLICT SEQADV 7M1V ALA B 991 UNP A0A219YLK LINKER SEQADV 7M1V GLY B 992 UNP A0A219YLK LINKER SEQADV 7M1V GLY B 993 UNP A0A219YLK LINKER SEQADV 7M1V GLY B 994 UNP A0A219YLK LINKER SEQADV 7M1V GLY B 995 UNP A0A219YLK LINKER SEQADV 7M1V SER B 996 UNP A0A219YLK LINKER SEQADV 7M1V GLY B 997 UNP A0A219YLK LINKER SEQADV 7M1V GLY B 998 UNP A0A219YLK LINKER SEQADV 7M1V GLY B 999 UNP A0A219YLK LINKER SEQADV 7M1V GLY B 1000 UNP A0A219YLK LINKER SEQADV 7M1V SER B 1001 UNP A0A219YLK LINKER SEQADV 7M1V THR B 1030 UNP A0A219YLK LEU 1528 CONFLICT SEQADV 7M1V SER B 1031 UNP A0A219YLK LEU 1529 CONFLICT SEQADV 7M1V SER B 1080 UNP A0A219YLK CYS 1578 CONFLICT SEQADV 7M1V CYS B 1088 UNP A0A219YLK ALA 1586 CONFLICT SEQADV 7M1V SER B 1143 UNP A0A219YLK CYS 1641 CONFLICT SEQADV 7M1V CYS B 1157 UNP A0A219YLK LYS 1655 CONFLICT SEQRES 1 A 221 GLY PRO LEU GLY SER SER VAL ASP MET TYR ILE GLU ARG SEQRES 2 A 221 ALA GLY ASP ILE THR TRP GLU LYS ASP ALA GLU VAL THR SEQRES 3 A 221 GLY ASN SER PRO ARG LEU ASP VAL ALA LEU ASP GLU SER SEQRES 4 A 221 GLY ASP PHE SER LEU VAL GLU ASP ASP GLY PRO PRO MET SEQRES 5 A 221 ALA GLY GLY GLY GLY SER GLY GLY GLY GLY SER GLY ALA SEQRES 6 A 221 LEU TRP ASP VAL PRO ALA PRO LYS GLU VAL LYS LYS GLY SEQRES 7 A 221 GLU THR THR ASP GLY VAL TYR ARG VAL MET THR ARG ARG SEQRES 8 A 221 THR SER GLY SER THR GLN VAL GLY VAL GLY VAL MET GLN SEQRES 9 A 221 GLU GLY VAL PHE HIS THR MET TRP HIS VAL THR LYS GLY SEQRES 10 A 221 SER ALA LEU ARG SER GLY GLU GLY ARG LEU ASP PRO TYR SEQRES 11 A 221 TRP GLY ASP VAL LYS GLN ASP LEU VAL SER TYR SER GLY SEQRES 12 A 221 PRO TRP LYS LEU ASP ALA CYS TRP ASP GLY HIS SER GLU SEQRES 13 A 221 VAL GLN LEU LEU ALA VAL PRO PRO GLY GLU ARG ALA ARG SEQRES 14 A 221 ASN ILE GLN THR LEU PRO GLY ILE PHE LYS THR LYS ASP SEQRES 15 A 221 GLY ASP ILE GLY ALA VAL ALA LEU ASP TYR PRO ALA GLY SEQRES 16 A 221 THR SER GLY SER PRO ILE LEU ASP LYS SER GLY ARG VAL SEQRES 17 A 221 ILE GLY LEU TYR GLY ASN GLY VAL VAL ILE CYS ASN GLY SEQRES 1 B 221 GLY PRO LEU GLY SER SER VAL ASP MET TYR ILE GLU ARG SEQRES 2 B 221 ALA GLY ASP ILE THR TRP GLU LYS ASP ALA GLU VAL THR SEQRES 3 B 221 GLY ASN SER PRO ARG LEU ASP VAL ALA LEU ASP GLU SER SEQRES 4 B 221 GLY ASP PHE SER LEU VAL GLU ASP ASP GLY PRO PRO MET SEQRES 5 B 221 ALA GLY GLY GLY GLY SER GLY GLY GLY GLY SER GLY ALA SEQRES 6 B 221 LEU TRP ASP VAL PRO ALA PRO LYS GLU VAL LYS LYS GLY SEQRES 7 B 221 GLU THR THR ASP GLY VAL TYR ARG VAL MET THR ARG ARG SEQRES 8 B 221 THR SER GLY SER THR GLN VAL GLY VAL GLY VAL MET GLN SEQRES 9 B 221 GLU GLY VAL PHE HIS THR MET TRP HIS VAL THR LYS GLY SEQRES 10 B 221 SER ALA LEU ARG SER GLY GLU GLY ARG LEU ASP PRO TYR SEQRES 11 B 221 TRP GLY ASP VAL LYS GLN ASP LEU VAL SER TYR SER GLY SEQRES 12 B 221 PRO TRP LYS LEU ASP ALA CYS TRP ASP GLY HIS SER GLU SEQRES 13 B 221 VAL GLN LEU LEU ALA VAL PRO PRO GLY GLU ARG ALA ARG SEQRES 14 B 221 ASN ILE GLN THR LEU PRO GLY ILE PHE LYS THR LYS ASP SEQRES 15 B 221 GLY ASP ILE GLY ALA VAL ALA LEU ASP TYR PRO ALA GLY SEQRES 16 B 221 THR SER GLY SER PRO ILE LEU ASP LYS SER GLY ARG VAL SEQRES 17 B 221 ILE GLY LEU TYR GLY ASN GLY VAL VAL ILE CYS ASN GLY HET YO1 A1201 42 HET EDO A1202 4 HET CL A1203 1 HET EDO B1201 4 HET DMS B1202 4 HET EDO B1203 4 HETNAM YO1 4-(2-{2,4-DIAMINO-5-[2-(4-{[(2E)-1,3-THIAZOLIDIN-2- HETNAM 2 YO1 YLIDENE]SULFAMOYL}PHENYL) HETNAM 3 YO1 HYDRAZINYL]PHENYL}HYDRAZINYL)-N-[(2S)-1,3-THIAZOLIDIN- HETNAM 4 YO1 2-YL]BENZENE-1-SULFONAMIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETNAM DMS DIMETHYL SULFOXIDE HETSYN YO1 NSC86314; NSC-86314 HETSYN EDO ETHYLENE GLYCOL FORMUL 3 YO1 C24 H20 N10 O4 S4 FORMUL 4 EDO 3(C2 H6 O2) FORMUL 5 CL CL 1- FORMUL 7 DMS C2 H6 O S FORMUL 9 HOH *300(H2 O) HELIX 1 AA1 MET A 1049 LYS A 1054 1 6 HELIX 2 AA2 PRO A 1131 SER A 1135 5 5 HELIX 3 AA3 MET B 1049 LYS B 1054 1 6 SHEET 1 AA1 6 ASP A 50 GLY A 57 0 SHEET 2 AA1 6 GLY A1021 ARG A1029 -1 O VAL A1022 N ALA A 56 SHEET 3 AA1 6 GLY A1032 GLN A1042 -1 O GLY A1037 N VAL A1025 SHEET 4 AA1 6 VAL A1045 THR A1048 -1 O HIS A1047 N VAL A1040 SHEET 5 AA1 6 LEU A1076 TYR A1079 -1 O VAL A1077 N THR A1048 SHEET 6 AA1 6 PRO A1067 ASP A1071 -1 N TYR A1068 O SER A1078 SHEET 1 AA2 6 GLU A 66 VAL A 67 0 SHEET 2 AA2 6 ARG A1107 THR A1111 1 O GLN A1110 N GLU A 66 SHEET 3 AA2 6 VAL A1095 ALA A1099 -1 N VAL A1095 O THR A1111 SHEET 4 AA2 6 PRO A1138 LEU A1140 -1 O LEU A1140 N GLN A1096 SHEET 5 AA2 6 VAL A1146 LEU A1149 -1 O GLY A1148 N ILE A1139 SHEET 6 AA2 6 GLY A1153 VAL A1154 -1 O GLY A1153 N LEU A1149 SHEET 1 AA3 2 LEU A1058 SER A1060 0 SHEET 2 AA3 2 GLY A1063 LEU A1065 -1 O LEU A1065 N LEU A1058 SHEET 1 AA4 2 GLY A1114 THR A1118 0 SHEET 2 AA4 2 GLY A1121 ALA A1125 -1 O ILE A1123 N PHE A1116 SHEET 1 AA5 6 ASP B 50 GLY B 57 0 SHEET 2 AA5 6 GLY B1021 ARG B1029 -1 O MET B1026 N TYR B 52 SHEET 3 AA5 6 GLY B1032 GLN B1042 -1 O GLY B1037 N VAL B1025 SHEET 4 AA5 6 VAL B1045 THR B1048 -1 O HIS B1047 N VAL B1040 SHEET 5 AA5 6 LEU B1076 TYR B1079 -1 O VAL B1077 N THR B1048 SHEET 6 AA5 6 PRO B1067 ASP B1071 -1 N TYR B1068 O SER B1078 SHEET 1 AA6 5 GLU B 66 VAL B 67 0 SHEET 2 AA6 5 ARG B1107 THR B1111 1 O GLN B1110 N GLU B 66 SHEET 3 AA6 5 VAL B1095 ALA B1099 -1 N LEU B1097 O ILE B1109 SHEET 4 AA6 5 PRO B1138 LEU B1140 -1 O LEU B1140 N GLN B1096 SHEET 5 AA6 5 VAL B1146 LEU B1149 -1 O GLY B1148 N ILE B1139 SHEET 1 AA7 3 GLY B1114 LYS B1117 0 SHEET 2 AA7 3 ASP B1122 ALA B1125 -1 O ILE B1123 N PHE B1116 SHEET 3 AA7 3 VAL B1154 VAL B1155 -1 O VAL B1154 N GLY B1124 SSBOND 1 CYS A 1088 CYS A 1157 1555 1555 2.05 SSBOND 2 CYS B 1088 CYS B 1157 1555 1555 2.54 CRYST1 40.810 42.637 46.296 98.88 92.11 90.41 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024504 0.000175 0.000941 0.00000 SCALE2 0.000000 0.023454 0.003674 0.00000 SCALE3 0.000000 0.000000 0.021878 0.00000