HEADER VIRAL PROTEIN 15-MAR-21 7M1W TITLE NMR STRUCTURE OF THE HUMAN T-CELL LEUKEMIA VIRUS 1 MATRIX PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MATRIX PROTEIN P19; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN T-CELL LEUKEMIA VIRUS TYPE I; SOURCE 3 ORGANISM_TAXID: 11908; SOURCE 4 GENE: GAG-PRO; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MATRIX, MEMBRANE-BINDING PROTEIN, GAG, HTLV-1, HUMAN T-CELL LEUKEMIA KEYWDS 2 VIRUS 1, VIRAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.HERRMANN,J.S.SAAD REVDAT 3 15-MAY-24 7M1W 1 REMARK REVDAT 2 14-JUN-23 7M1W 1 REMARK REVDAT 1 22-SEP-21 7M1W 0 JRNL AUTH D.HERRMANN,L.W.ZHOU,H.M.HANSON,N.A.WILLKOMM,L.M.MANSKY, JRNL AUTH 2 J.S.SAAD JRNL TITL STRUCTURAL INSIGHTS INTO THE MECHANISM OF HUMAN T-CELL JRNL TITL 2 LEUKEMIA VIRUS TYPE 1 GAG TARGETING TO THE PLASMA MEMBRANE JRNL TITL 3 FOR ASSEMBLY. JRNL REF J.MOL.BIOL. V. 433 67161 2021 JRNL REFN ESSN 1089-8638 JRNL PMID 34298060 JRNL DOI 10.1016/J.JMB.2021.167161 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL OF REMARK 3 1005 DISTANCE RESTRAINTS. 286 INTRARESIDUE, 256 SEQUENTIAL, 263 REMARK 3 MEDIUM-RANGE, AND 200 LONG-RANGE NOES REMARK 4 REMARK 4 7M1W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1000255469. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 100 MM SODIUM CHLORIDE, 50 MM REMARK 210 SODIUM PHOSPHATE, 2 MM TCEP, 400 REMARK 210 UM [U-99% 13C; U-99% 15N] HTLV-1 REMARK 210 MATRIX, 95% H2O/5% D2O; 100 MM REMARK 210 SODIUM CHLORIDE, 50 MM SODIUM REMARK 210 PHOSPHATE, 2 MM TCEP, 320 UM [U- REMARK 210 99% 13C; U-99% 15N] HTLV-1 REMARK 210 MATRIX, 100% D2O; 100 MM SODIUM REMARK 210 CHLORIDE, 50 MM SODIUM PHOSPHATE, REMARK 210 2 MM TCEP, 500 UM [U-99% 15N] REMARK 210 HTLV-1 MATRIX, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCA; 3D HNCO; 3D HNCACB; REMARK 210 HN(CO)CACB; 3D HN(CO)CA; 2D 1H- REMARK 210 15N HSQC; 3D HCCH-TOCSY ALI.; 3D REMARK 210 HCCH-TOCSY AROM.; 3D 13C- REMARK 210 SEPARATED NOESY; 3D 15N- REMARK 210 SEPARATED NOESY; 3D 15N- REMARK 210 SEPARATED TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE II REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CCPNMR ANALYSIS 2.4, CARA REMARK 210 1.9.1.2, UNIO 10, TOPSPIN, REMARK 210 NMRPIPE REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 4 116.92 -178.23 REMARK 500 1 PRO A 16 -172.12 -69.75 REMARK 500 1 LEU A 19 123.75 -175.13 REMARK 500 1 PRO A 38 -171.01 -69.74 REMARK 500 1 PRO A 57 72.20 -69.77 REMARK 500 1 ILE A 60 -64.81 -95.19 REMARK 500 1 ILE A 63 90.83 53.04 REMARK 500 1 ASN A 64 79.69 -115.81 REMARK 500 1 LYS A 74 -60.69 176.14 REMARK 500 1 TYR A 76 59.06 -142.71 REMARK 500 1 ARG A 79 -54.56 179.92 REMARK 500 1 ALA A 92 50.62 -90.11 REMARK 500 1 GLN A 93 29.23 -140.67 REMARK 500 1 PRO A 95 83.21 -69.77 REMARK 500 1 SER A 96 -74.17 -146.87 REMARK 500 1 ALA A 99 -178.36 62.95 REMARK 500 1 HIS A 102 -63.27 -137.13 REMARK 500 2 ARG A 3 -62.90 -91.43 REMARK 500 2 ILE A 4 -36.87 -174.10 REMARK 500 2 PHE A 5 -169.93 52.02 REMARK 500 2 ARG A 7 -172.26 57.54 REMARK 500 2 SER A 8 161.40 63.12 REMARK 500 2 PRO A 11 78.59 -69.84 REMARK 500 2 ARG A 14 81.08 -179.52 REMARK 500 2 PRO A 16 -172.93 -69.77 REMARK 500 2 LEU A 19 125.37 -175.03 REMARK 500 2 PRO A 57 70.30 -69.89 REMARK 500 2 ILE A 60 -64.78 -95.68 REMARK 500 2 ILE A 63 91.38 53.54 REMARK 500 2 LYS A 74 -69.58 177.79 REMARK 500 2 ARG A 79 -70.01 70.78 REMARK 500 2 GLN A 93 36.86 -141.94 REMARK 500 2 SER A 96 52.19 -118.39 REMARK 500 2 HIS A 101 142.04 -176.54 REMARK 500 2 HIS A 102 -64.40 -98.25 REMARK 500 3 ARG A 3 27.73 -142.52 REMARK 500 3 SER A 6 122.99 -171.09 REMARK 500 3 ALA A 9 -71.41 -53.52 REMARK 500 3 SER A 10 151.29 64.73 REMARK 500 3 ILE A 12 74.75 -112.67 REMARK 500 3 ARG A 14 57.79 -176.71 REMARK 500 3 PRO A 16 -174.45 -69.77 REMARK 500 3 LEU A 19 122.20 -174.84 REMARK 500 3 PRO A 38 -170.80 -69.78 REMARK 500 3 PRO A 57 71.16 -69.75 REMARK 500 3 ILE A 60 -64.60 -95.21 REMARK 500 3 ILE A 63 90.54 52.55 REMARK 500 3 LYS A 74 -64.72 175.72 REMARK 500 3 ARG A 79 40.21 -109.16 REMARK 500 3 SER A 96 75.63 -174.06 REMARK 500 REMARK 500 THIS ENTRY HAS 335 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30880 RELATED DB: BMRB REMARK 900 NMR STRUCTURE OF THE HUMAN T-CELL LEUKEMIA VIRUS 1 MATRIX PROTEIN DBREF 7M1W A 1 99 UNP Q9QR99 Q9QR99_9DELA 1 99 SEQADV 7M1W ARG A 3 UNP Q9QR99 GLN 3 CONFLICT SEQADV 7M1W HIS A 100 UNP Q9QR99 EXPRESSION TAG SEQADV 7M1W HIS A 101 UNP Q9QR99 EXPRESSION TAG SEQADV 7M1W HIS A 102 UNP Q9QR99 EXPRESSION TAG SEQADV 7M1W HIS A 103 UNP Q9QR99 EXPRESSION TAG SEQADV 7M1W HIS A 104 UNP Q9QR99 EXPRESSION TAG SEQADV 7M1W HIS A 105 UNP Q9QR99 EXPRESSION TAG SEQRES 1 A 105 MET GLY ARG ILE PHE SER ARG SER ALA SER PRO ILE PRO SEQRES 2 A 105 ARG PRO PRO ARG GLY LEU ALA ALA HIS HIS TRP LEU ASN SEQRES 3 A 105 PHE LEU GLN ALA ALA TYR ARG LEU GLU PRO GLY PRO SER SEQRES 4 A 105 SER TYR ASP PHE HIS GLN LEU LYS LYS PHE LEU LYS ILE SEQRES 5 A 105 ALA LEU GLU THR PRO VAL TRP ILE CYS PRO ILE ASN TYR SEQRES 6 A 105 SER LEU LEU ALA SER LEU LEU PRO LYS GLY TYR PRO GLY SEQRES 7 A 105 ARG VAL ASN GLU ILE LEU HIS ILE LEU ILE GLN THR GLN SEQRES 8 A 105 ALA GLN ILE PRO SER ARG PRO ALA HIS HIS HIS HIS HIS SEQRES 9 A 105 HIS HELIX 1 AA1 ALA A 20 GLU A 35 1 16 HELIX 2 AA2 SER A 39 GLN A 45 1 7 HELIX 3 AA3 GLN A 45 THR A 56 1 12 HELIX 4 AA4 ASN A 64 ALA A 69 1 6 HELIX 5 AA5 VAL A 80 GLN A 91 1 12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1