data_7M61 # _entry.id 7M61 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7M61 pdb_00007m61 10.2210/pdb7m61/pdb WWPDB D_1000254085 ? ? EMDB EMD-23686 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 6VW2 unspecified EMDB . EMD-23686 'associated EM volume' EMDB . EMD-23688 'other EM volume' EMDB . EMD-23689 'other EM volume' EMDB . EMD-23687 'other EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7M61 _pdbx_database_status.recvd_initial_deposition_date 2021-03-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cao, Q.' 1 0000-0003-4207-2697 'Boyer, D.R.' 2 0000-0002-4487-0230 'Sawaya, M.R.' 3 0000-0003-0874-9043 'Eisenberg, D.S.' 4 0000-0003-2432-5419 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1545-9985 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 28 _citation.language ? _citation.page_first 724 _citation.page_last 730 _citation.title 'Cryo-EM structures of hIAPP fibrils seeded by patient-extracted fibrils reveal new polymorphs and conserved fibril cores' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41594-021-00646-x _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cao, Q.' 1 0000-0003-4207-2697 primary 'Boyer, D.R.' 2 ? primary 'Sawaya, M.R.' 3 0000-0003-0874-9043 primary 'Abskharon, R.' 4 ? primary 'Saelices, L.' 5 ? primary 'Nguyen, B.A.' 6 ? primary 'Lu, J.' 7 ? primary 'Murray, K.A.' 8 ? primary 'Kandeel, F.' 9 ? primary 'Eisenberg, D.S.' 10 0000-0003-2432-5419 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7M61 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7M61 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Islet amyloid polypeptide' _entity.formula_weight 3907.312 _entity.pdbx_number_of_molecules 10 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'C-terminal amidated peptide (UNP residues 34-70)' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Amylin,Diabetes-associated peptide,DAP,Insulinoma amyloid peptide' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'KCNTATCATQRLANFLVHSSNNFGAILSSTNVGSNTY(NH2)' _entity_poly.pdbx_seq_one_letter_code_can KCNTATCATQRLANFLVHSSNNFGAILSSTNVGSNTYX _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H,I,J _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 CYS n 1 3 ASN n 1 4 THR n 1 5 ALA n 1 6 THR n 1 7 CYS n 1 8 ALA n 1 9 THR n 1 10 GLN n 1 11 ARG n 1 12 LEU n 1 13 ALA n 1 14 ASN n 1 15 PHE n 1 16 LEU n 1 17 VAL n 1 18 HIS n 1 19 SER n 1 20 SER n 1 21 ASN n 1 22 ASN n 1 23 PHE n 1 24 GLY n 1 25 ALA n 1 26 ILE n 1 27 LEU n 1 28 SER n 1 29 SER n 1 30 THR n 1 31 ASN n 1 32 VAL n 1 33 GLY n 1 34 SER n 1 35 ASN n 1 36 THR n 1 37 TYR n 1 38 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 38 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code IAPP_HUMAN _struct_ref.pdbx_db_accession P10997 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code KCNTATCATQRLANFLVHSSNNFGAILSSTNVGSNTY _struct_ref.pdbx_align_begin 34 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7M61 A 1 ? 37 ? P10997 34 ? 70 ? 1 37 2 1 7M61 B 1 ? 37 ? P10997 34 ? 70 ? 1 37 3 1 7M61 C 1 ? 37 ? P10997 34 ? 70 ? 1 37 4 1 7M61 D 1 ? 37 ? P10997 34 ? 70 ? 1 37 5 1 7M61 E 1 ? 37 ? P10997 34 ? 70 ? 1 37 6 1 7M61 F 1 ? 37 ? P10997 34 ? 70 ? 1 37 7 1 7M61 G 1 ? 37 ? P10997 34 ? 70 ? 1 37 8 1 7M61 H 1 ? 37 ? P10997 34 ? 70 ? 1 37 9 1 7M61 I 1 ? 37 ? P10997 34 ? 70 ? 1 37 10 1 7M61 J 1 ? 37 ? P10997 34 ? 70 ? 1 37 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7M61 NH2 A 38 ? UNP P10997 ? ? amidation 38 1 2 7M61 NH2 B 38 ? UNP P10997 ? ? amidation 38 2 3 7M61 NH2 C 38 ? UNP P10997 ? ? amidation 38 3 4 7M61 NH2 D 38 ? UNP P10997 ? ? amidation 38 4 5 7M61 NH2 E 38 ? UNP P10997 ? ? amidation 38 5 6 7M61 NH2 F 38 ? UNP P10997 ? ? amidation 38 6 7 7M61 NH2 G 38 ? UNP P10997 ? ? amidation 38 7 8 7M61 NH2 H 38 ? UNP P10997 ? ? amidation 38 8 9 7M61 NH2 I 38 ? UNP P10997 ? ? amidation 38 9 10 7M61 NH2 J 38 ? UNP P10997 ? ? amidation 38 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7M61 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 7M61 _struct.title 'Cryo-EM structure of human islet amyloid polypeptide (hIAPP, or amylin) fibrils seeded by patient extracted fibrils, polymorph 1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7M61 _struct_keywords.text 'hIAPP, type II diabetes, amyloid, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A TYR 37 C ? ? ? 1_555 A NH2 38 N ? ? A TYR 37 A NH2 38 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale2 covale both ? B TYR 37 C ? ? ? 1_555 B NH2 38 N ? ? B TYR 37 B NH2 38 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? C TYR 37 C ? ? ? 1_555 C NH2 38 N ? ? C TYR 37 C NH2 38 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale both ? D TYR 37 C ? ? ? 1_555 D NH2 38 N ? ? D TYR 37 D NH2 38 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? E TYR 37 C ? ? ? 1_555 E NH2 38 N ? ? E TYR 37 E NH2 38 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale6 covale both ? F TYR 37 C ? ? ? 1_555 F NH2 38 N ? ? F TYR 37 F NH2 38 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale7 covale both ? G TYR 37 C ? ? ? 1_555 G NH2 38 N ? ? G TYR 37 G NH2 38 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale8 covale both ? H TYR 37 C ? ? ? 1_555 H NH2 38 N ? ? H TYR 37 H NH2 38 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale9 covale both ? I TYR 37 C ? ? ? 1_555 I NH2 38 N ? ? I TYR 37 I NH2 38 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale10 covale both ? J TYR 37 C ? ? ? 1_555 J NH2 38 N ? ? J TYR 37 J NH2 38 1_555 ? ? ? ? ? ? ? 1.328 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? AA3 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA3 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN C 14 ? PHE C 15 ? ASN C 14 PHE C 15 AA1 2 ASN E 14 ? PHE E 15 ? ASN E 14 PHE E 15 AA1 3 ASN G 14 ? PHE G 15 ? ASN G 14 PHE G 15 AA1 4 ASN A 14 ? PHE A 15 ? ASN A 14 PHE A 15 AA1 5 ASN I 14 ? PHE I 15 ? ASN I 14 PHE I 15 AA2 1 ASN C 35 ? THR C 36 ? ASN C 35 THR C 36 AA2 2 ASN E 35 ? THR E 36 ? ASN E 35 THR E 36 AA2 3 ASN G 35 ? THR G 36 ? ASN G 35 THR G 36 AA2 4 ASN A 35 ? THR A 36 ? ASN A 35 THR A 36 AA2 5 ASN I 35 ? THR I 36 ? ASN I 35 THR I 36 AA3 1 PHE D 23 ? ALA D 25 ? PHE D 23 ALA D 25 AA3 2 PHE F 23 ? ALA F 25 ? PHE F 23 ALA F 25 AA3 3 PHE H 23 ? ALA H 25 ? PHE H 23 ALA H 25 AA3 4 PHE B 23 ? ALA B 25 ? PHE B 23 ALA B 25 AA3 5 PHE J 23 ? ALA J 25 ? PHE J 23 ALA J 25 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE C 15 ? N PHE C 15 O ASN E 14 ? O ASN E 14 AA1 2 3 N PHE E 15 ? N PHE E 15 O ASN G 14 ? O ASN G 14 AA1 3 4 O PHE G 15 ? O PHE G 15 N ASN A 14 ? N ASN A 14 AA1 4 5 N PHE A 15 ? N PHE A 15 O ASN I 14 ? O ASN I 14 AA2 1 2 N THR C 36 ? N THR C 36 O ASN E 35 ? O ASN E 35 AA2 2 3 N THR E 36 ? N THR E 36 O ASN G 35 ? O ASN G 35 AA2 3 4 O THR G 36 ? O THR G 36 N ASN A 35 ? N ASN A 35 AA2 4 5 N THR A 36 ? N THR A 36 O ASN I 35 ? O ASN I 35 AA3 1 2 N GLY D 24 ? N GLY D 24 O PHE F 23 ? O PHE F 23 AA3 2 3 N GLY F 24 ? N GLY F 24 O PHE H 23 ? O PHE H 23 AA3 3 4 O GLY H 24 ? O GLY H 24 N PHE B 23 ? N PHE B 23 AA3 4 5 N GLY B 24 ? N GLY B 24 O PHE J 23 ? O PHE J 23 # _atom_sites.entry_id 7M61 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 ? ? ? A . n A 1 2 CYS 2 2 ? ? ? A . n A 1 3 ASN 3 3 ? ? ? A . n A 1 4 THR 4 4 ? ? ? A . n A 1 5 ALA 5 5 ? ? ? A . n A 1 6 THR 6 6 ? ? ? A . n A 1 7 CYS 7 7 ? ? ? A . n A 1 8 ALA 8 8 ? ? ? A . n A 1 9 THR 9 9 ? ? ? A . n A 1 10 GLN 10 10 ? ? ? A . n A 1 11 ARG 11 11 ? ? ? A . n A 1 12 LEU 12 12 ? ? ? A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 HIS 18 18 18 HIS HIS A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 ASN 31 31 31 ASN ASN A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 NH2 38 38 37 NH2 TYR A . n B 1 1 LYS 1 1 ? ? ? B . n B 1 2 CYS 2 2 ? ? ? B . n B 1 3 ASN 3 3 ? ? ? B . n B 1 4 THR 4 4 ? ? ? B . n B 1 5 ALA 5 5 ? ? ? B . n B 1 6 THR 6 6 ? ? ? B . n B 1 7 CYS 7 7 ? ? ? B . n B 1 8 ALA 8 8 ? ? ? B . n B 1 9 THR 9 9 ? ? ? B . n B 1 10 GLN 10 10 ? ? ? B . n B 1 11 ARG 11 11 ? ? ? B . n B 1 12 LEU 12 12 ? ? ? B . n B 1 13 ALA 13 13 ? ? ? B . n B 1 14 ASN 14 14 ? ? ? B . n B 1 15 PHE 15 15 ? ? ? B . n B 1 16 LEU 16 16 ? ? ? B . n B 1 17 VAL 17 17 17 VAL VAL B . n B 1 18 HIS 18 18 18 HIS HIS B . n B 1 19 SER 19 19 19 SER SER B . n B 1 20 SER 20 20 20 SER SER B . n B 1 21 ASN 21 21 21 ASN ASN B . n B 1 22 ASN 22 22 22 ASN ASN B . n B 1 23 PHE 23 23 23 PHE PHE B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 ALA 25 25 25 ALA ALA B . n B 1 26 ILE 26 26 26 ILE ILE B . n B 1 27 LEU 27 27 27 LEU LEU B . n B 1 28 SER 28 28 28 SER SER B . n B 1 29 SER 29 29 29 SER SER B . n B 1 30 THR 30 30 30 THR THR B . n B 1 31 ASN 31 31 31 ASN ASN B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 GLY 33 33 33 GLY GLY B . n B 1 34 SER 34 34 34 SER SER B . n B 1 35 ASN 35 35 35 ASN ASN B . n B 1 36 THR 36 36 36 THR THR B . n B 1 37 TYR 37 37 37 TYR TYR B . n B 1 38 NH2 38 38 37 NH2 TYR B . n C 1 1 LYS 1 1 ? ? ? C . n C 1 2 CYS 2 2 ? ? ? C . n C 1 3 ASN 3 3 ? ? ? C . n C 1 4 THR 4 4 ? ? ? C . n C 1 5 ALA 5 5 ? ? ? C . n C 1 6 THR 6 6 ? ? ? C . n C 1 7 CYS 7 7 ? ? ? C . n C 1 8 ALA 8 8 ? ? ? C . n C 1 9 THR 9 9 ? ? ? C . n C 1 10 GLN 10 10 ? ? ? C . n C 1 11 ARG 11 11 ? ? ? C . n C 1 12 LEU 12 12 ? ? ? C . n C 1 13 ALA 13 13 13 ALA ALA C . n C 1 14 ASN 14 14 14 ASN ASN C . n C 1 15 PHE 15 15 15 PHE PHE C . n C 1 16 LEU 16 16 16 LEU LEU C . n C 1 17 VAL 17 17 17 VAL VAL C . n C 1 18 HIS 18 18 18 HIS HIS C . n C 1 19 SER 19 19 19 SER SER C . n C 1 20 SER 20 20 20 SER SER C . n C 1 21 ASN 21 21 21 ASN ASN C . n C 1 22 ASN 22 22 22 ASN ASN C . n C 1 23 PHE 23 23 23 PHE PHE C . n C 1 24 GLY 24 24 24 GLY GLY C . n C 1 25 ALA 25 25 25 ALA ALA C . n C 1 26 ILE 26 26 26 ILE ILE C . n C 1 27 LEU 27 27 27 LEU LEU C . n C 1 28 SER 28 28 28 SER SER C . n C 1 29 SER 29 29 29 SER SER C . n C 1 30 THR 30 30 30 THR THR C . n C 1 31 ASN 31 31 31 ASN ASN C . n C 1 32 VAL 32 32 32 VAL VAL C . n C 1 33 GLY 33 33 33 GLY GLY C . n C 1 34 SER 34 34 34 SER SER C . n C 1 35 ASN 35 35 35 ASN ASN C . n C 1 36 THR 36 36 36 THR THR C . n C 1 37 TYR 37 37 37 TYR TYR C . n C 1 38 NH2 38 38 37 NH2 TYR C . n D 1 1 LYS 1 1 ? ? ? D . n D 1 2 CYS 2 2 ? ? ? D . n D 1 3 ASN 3 3 ? ? ? D . n D 1 4 THR 4 4 ? ? ? D . n D 1 5 ALA 5 5 ? ? ? D . n D 1 6 THR 6 6 ? ? ? D . n D 1 7 CYS 7 7 ? ? ? D . n D 1 8 ALA 8 8 ? ? ? D . n D 1 9 THR 9 9 ? ? ? D . n D 1 10 GLN 10 10 ? ? ? D . n D 1 11 ARG 11 11 ? ? ? D . n D 1 12 LEU 12 12 ? ? ? D . n D 1 13 ALA 13 13 ? ? ? D . n D 1 14 ASN 14 14 ? ? ? D . n D 1 15 PHE 15 15 ? ? ? D . n D 1 16 LEU 16 16 ? ? ? D . n D 1 17 VAL 17 17 17 VAL VAL D . n D 1 18 HIS 18 18 18 HIS HIS D . n D 1 19 SER 19 19 19 SER SER D . n D 1 20 SER 20 20 20 SER SER D . n D 1 21 ASN 21 21 21 ASN ASN D . n D 1 22 ASN 22 22 22 ASN ASN D . n D 1 23 PHE 23 23 23 PHE PHE D . n D 1 24 GLY 24 24 24 GLY GLY D . n D 1 25 ALA 25 25 25 ALA ALA D . n D 1 26 ILE 26 26 26 ILE ILE D . n D 1 27 LEU 27 27 27 LEU LEU D . n D 1 28 SER 28 28 28 SER SER D . n D 1 29 SER 29 29 29 SER SER D . n D 1 30 THR 30 30 30 THR THR D . n D 1 31 ASN 31 31 31 ASN ASN D . n D 1 32 VAL 32 32 32 VAL VAL D . n D 1 33 GLY 33 33 33 GLY GLY D . n D 1 34 SER 34 34 34 SER SER D . n D 1 35 ASN 35 35 35 ASN ASN D . n D 1 36 THR 36 36 36 THR THR D . n D 1 37 TYR 37 37 37 TYR TYR D . n D 1 38 NH2 38 38 37 NH2 TYR D . n E 1 1 LYS 1 1 ? ? ? E . n E 1 2 CYS 2 2 ? ? ? E . n E 1 3 ASN 3 3 ? ? ? E . n E 1 4 THR 4 4 ? ? ? E . n E 1 5 ALA 5 5 ? ? ? E . n E 1 6 THR 6 6 ? ? ? E . n E 1 7 CYS 7 7 ? ? ? E . n E 1 8 ALA 8 8 ? ? ? E . n E 1 9 THR 9 9 ? ? ? E . n E 1 10 GLN 10 10 ? ? ? E . n E 1 11 ARG 11 11 ? ? ? E . n E 1 12 LEU 12 12 ? ? ? E . n E 1 13 ALA 13 13 13 ALA ALA E . n E 1 14 ASN 14 14 14 ASN ASN E . n E 1 15 PHE 15 15 15 PHE PHE E . n E 1 16 LEU 16 16 16 LEU LEU E . n E 1 17 VAL 17 17 17 VAL VAL E . n E 1 18 HIS 18 18 18 HIS HIS E . n E 1 19 SER 19 19 19 SER SER E . n E 1 20 SER 20 20 20 SER SER E . n E 1 21 ASN 21 21 21 ASN ASN E . n E 1 22 ASN 22 22 22 ASN ASN E . n E 1 23 PHE 23 23 23 PHE PHE E . n E 1 24 GLY 24 24 24 GLY GLY E . n E 1 25 ALA 25 25 25 ALA ALA E . n E 1 26 ILE 26 26 26 ILE ILE E . n E 1 27 LEU 27 27 27 LEU LEU E . n E 1 28 SER 28 28 28 SER SER E . n E 1 29 SER 29 29 29 SER SER E . n E 1 30 THR 30 30 30 THR THR E . n E 1 31 ASN 31 31 31 ASN ASN E . n E 1 32 VAL 32 32 32 VAL VAL E . n E 1 33 GLY 33 33 33 GLY GLY E . n E 1 34 SER 34 34 34 SER SER E . n E 1 35 ASN 35 35 35 ASN ASN E . n E 1 36 THR 36 36 36 THR THR E . n E 1 37 TYR 37 37 37 TYR TYR E . n E 1 38 NH2 38 38 37 NH2 TYR E . n F 1 1 LYS 1 1 ? ? ? F . n F 1 2 CYS 2 2 ? ? ? F . n F 1 3 ASN 3 3 ? ? ? F . n F 1 4 THR 4 4 ? ? ? F . n F 1 5 ALA 5 5 ? ? ? F . n F 1 6 THR 6 6 ? ? ? F . n F 1 7 CYS 7 7 ? ? ? F . n F 1 8 ALA 8 8 ? ? ? F . n F 1 9 THR 9 9 ? ? ? F . n F 1 10 GLN 10 10 ? ? ? F . n F 1 11 ARG 11 11 ? ? ? F . n F 1 12 LEU 12 12 ? ? ? F . n F 1 13 ALA 13 13 ? ? ? F . n F 1 14 ASN 14 14 ? ? ? F . n F 1 15 PHE 15 15 ? ? ? F . n F 1 16 LEU 16 16 ? ? ? F . n F 1 17 VAL 17 17 17 VAL VAL F . n F 1 18 HIS 18 18 18 HIS HIS F . n F 1 19 SER 19 19 19 SER SER F . n F 1 20 SER 20 20 20 SER SER F . n F 1 21 ASN 21 21 21 ASN ASN F . n F 1 22 ASN 22 22 22 ASN ASN F . n F 1 23 PHE 23 23 23 PHE PHE F . n F 1 24 GLY 24 24 24 GLY GLY F . n F 1 25 ALA 25 25 25 ALA ALA F . n F 1 26 ILE 26 26 26 ILE ILE F . n F 1 27 LEU 27 27 27 LEU LEU F . n F 1 28 SER 28 28 28 SER SER F . n F 1 29 SER 29 29 29 SER SER F . n F 1 30 THR 30 30 30 THR THR F . n F 1 31 ASN 31 31 31 ASN ASN F . n F 1 32 VAL 32 32 32 VAL VAL F . n F 1 33 GLY 33 33 33 GLY GLY F . n F 1 34 SER 34 34 34 SER SER F . n F 1 35 ASN 35 35 35 ASN ASN F . n F 1 36 THR 36 36 36 THR THR F . n F 1 37 TYR 37 37 37 TYR TYR F . n F 1 38 NH2 38 38 37 NH2 TYR F . n G 1 1 LYS 1 1 ? ? ? G . n G 1 2 CYS 2 2 ? ? ? G . n G 1 3 ASN 3 3 ? ? ? G . n G 1 4 THR 4 4 ? ? ? G . n G 1 5 ALA 5 5 ? ? ? G . n G 1 6 THR 6 6 ? ? ? G . n G 1 7 CYS 7 7 ? ? ? G . n G 1 8 ALA 8 8 ? ? ? G . n G 1 9 THR 9 9 ? ? ? G . n G 1 10 GLN 10 10 ? ? ? G . n G 1 11 ARG 11 11 ? ? ? G . n G 1 12 LEU 12 12 ? ? ? G . n G 1 13 ALA 13 13 13 ALA ALA G . n G 1 14 ASN 14 14 14 ASN ASN G . n G 1 15 PHE 15 15 15 PHE PHE G . n G 1 16 LEU 16 16 16 LEU LEU G . n G 1 17 VAL 17 17 17 VAL VAL G . n G 1 18 HIS 18 18 18 HIS HIS G . n G 1 19 SER 19 19 19 SER SER G . n G 1 20 SER 20 20 20 SER SER G . n G 1 21 ASN 21 21 21 ASN ASN G . n G 1 22 ASN 22 22 22 ASN ASN G . n G 1 23 PHE 23 23 23 PHE PHE G . n G 1 24 GLY 24 24 24 GLY GLY G . n G 1 25 ALA 25 25 25 ALA ALA G . n G 1 26 ILE 26 26 26 ILE ILE G . n G 1 27 LEU 27 27 27 LEU LEU G . n G 1 28 SER 28 28 28 SER SER G . n G 1 29 SER 29 29 29 SER SER G . n G 1 30 THR 30 30 30 THR THR G . n G 1 31 ASN 31 31 31 ASN ASN G . n G 1 32 VAL 32 32 32 VAL VAL G . n G 1 33 GLY 33 33 33 GLY GLY G . n G 1 34 SER 34 34 34 SER SER G . n G 1 35 ASN 35 35 35 ASN ASN G . n G 1 36 THR 36 36 36 THR THR G . n G 1 37 TYR 37 37 37 TYR TYR G . n G 1 38 NH2 38 38 37 NH2 TYR G . n H 1 1 LYS 1 1 ? ? ? H . n H 1 2 CYS 2 2 ? ? ? H . n H 1 3 ASN 3 3 ? ? ? H . n H 1 4 THR 4 4 ? ? ? H . n H 1 5 ALA 5 5 ? ? ? H . n H 1 6 THR 6 6 ? ? ? H . n H 1 7 CYS 7 7 ? ? ? H . n H 1 8 ALA 8 8 ? ? ? H . n H 1 9 THR 9 9 ? ? ? H . n H 1 10 GLN 10 10 ? ? ? H . n H 1 11 ARG 11 11 ? ? ? H . n H 1 12 LEU 12 12 ? ? ? H . n H 1 13 ALA 13 13 ? ? ? H . n H 1 14 ASN 14 14 ? ? ? H . n H 1 15 PHE 15 15 ? ? ? H . n H 1 16 LEU 16 16 ? ? ? H . n H 1 17 VAL 17 17 17 VAL VAL H . n H 1 18 HIS 18 18 18 HIS HIS H . n H 1 19 SER 19 19 19 SER SER H . n H 1 20 SER 20 20 20 SER SER H . n H 1 21 ASN 21 21 21 ASN ASN H . n H 1 22 ASN 22 22 22 ASN ASN H . n H 1 23 PHE 23 23 23 PHE PHE H . n H 1 24 GLY 24 24 24 GLY GLY H . n H 1 25 ALA 25 25 25 ALA ALA H . n H 1 26 ILE 26 26 26 ILE ILE H . n H 1 27 LEU 27 27 27 LEU LEU H . n H 1 28 SER 28 28 28 SER SER H . n H 1 29 SER 29 29 29 SER SER H . n H 1 30 THR 30 30 30 THR THR H . n H 1 31 ASN 31 31 31 ASN ASN H . n H 1 32 VAL 32 32 32 VAL VAL H . n H 1 33 GLY 33 33 33 GLY GLY H . n H 1 34 SER 34 34 34 SER SER H . n H 1 35 ASN 35 35 35 ASN ASN H . n H 1 36 THR 36 36 36 THR THR H . n H 1 37 TYR 37 37 37 TYR TYR H . n H 1 38 NH2 38 38 37 NH2 TYR H . n I 1 1 LYS 1 1 ? ? ? I . n I 1 2 CYS 2 2 ? ? ? I . n I 1 3 ASN 3 3 ? ? ? I . n I 1 4 THR 4 4 ? ? ? I . n I 1 5 ALA 5 5 ? ? ? I . n I 1 6 THR 6 6 ? ? ? I . n I 1 7 CYS 7 7 ? ? ? I . n I 1 8 ALA 8 8 ? ? ? I . n I 1 9 THR 9 9 ? ? ? I . n I 1 10 GLN 10 10 ? ? ? I . n I 1 11 ARG 11 11 ? ? ? I . n I 1 12 LEU 12 12 ? ? ? I . n I 1 13 ALA 13 13 13 ALA ALA I . n I 1 14 ASN 14 14 14 ASN ASN I . n I 1 15 PHE 15 15 15 PHE PHE I . n I 1 16 LEU 16 16 16 LEU LEU I . n I 1 17 VAL 17 17 17 VAL VAL I . n I 1 18 HIS 18 18 18 HIS HIS I . n I 1 19 SER 19 19 19 SER SER I . n I 1 20 SER 20 20 20 SER SER I . n I 1 21 ASN 21 21 21 ASN ASN I . n I 1 22 ASN 22 22 22 ASN ASN I . n I 1 23 PHE 23 23 23 PHE PHE I . n I 1 24 GLY 24 24 24 GLY GLY I . n I 1 25 ALA 25 25 25 ALA ALA I . n I 1 26 ILE 26 26 26 ILE ILE I . n I 1 27 LEU 27 27 27 LEU LEU I . n I 1 28 SER 28 28 28 SER SER I . n I 1 29 SER 29 29 29 SER SER I . n I 1 30 THR 30 30 30 THR THR I . n I 1 31 ASN 31 31 31 ASN ASN I . n I 1 32 VAL 32 32 32 VAL VAL I . n I 1 33 GLY 33 33 33 GLY GLY I . n I 1 34 SER 34 34 34 SER SER I . n I 1 35 ASN 35 35 35 ASN ASN I . n I 1 36 THR 36 36 36 THR THR I . n I 1 37 TYR 37 37 37 TYR TYR I . n I 1 38 NH2 38 38 37 NH2 TYR I . n J 1 1 LYS 1 1 ? ? ? J . n J 1 2 CYS 2 2 ? ? ? J . n J 1 3 ASN 3 3 ? ? ? J . n J 1 4 THR 4 4 ? ? ? J . n J 1 5 ALA 5 5 ? ? ? J . n J 1 6 THR 6 6 ? ? ? J . n J 1 7 CYS 7 7 ? ? ? J . n J 1 8 ALA 8 8 ? ? ? J . n J 1 9 THR 9 9 ? ? ? J . n J 1 10 GLN 10 10 ? ? ? J . n J 1 11 ARG 11 11 ? ? ? J . n J 1 12 LEU 12 12 ? ? ? J . n J 1 13 ALA 13 13 ? ? ? J . n J 1 14 ASN 14 14 ? ? ? J . n J 1 15 PHE 15 15 ? ? ? J . n J 1 16 LEU 16 16 ? ? ? J . n J 1 17 VAL 17 17 17 VAL VAL J . n J 1 18 HIS 18 18 18 HIS HIS J . n J 1 19 SER 19 19 19 SER SER J . n J 1 20 SER 20 20 20 SER SER J . n J 1 21 ASN 21 21 21 ASN ASN J . n J 1 22 ASN 22 22 22 ASN ASN J . n J 1 23 PHE 23 23 23 PHE PHE J . n J 1 24 GLY 24 24 24 GLY GLY J . n J 1 25 ALA 25 25 25 ALA ALA J . n J 1 26 ILE 26 26 26 ILE ILE J . n J 1 27 LEU 27 27 27 LEU LEU J . n J 1 28 SER 28 28 28 SER SER J . n J 1 29 SER 29 29 29 SER SER J . n J 1 30 THR 30 30 30 THR THR J . n J 1 31 ASN 31 31 31 ASN ASN J . n J 1 32 VAL 32 32 32 VAL VAL J . n J 1 33 GLY 33 33 33 GLY GLY J . n J 1 34 SER 34 34 34 SER SER J . n J 1 35 ASN 35 35 35 ASN ASN J . n J 1 36 THR 36 36 36 THR THR J . n J 1 37 TYR 37 37 37 TYR TYR J . n J 1 38 NH2 38 38 37 NH2 TYR J . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_helical_symmetry.entry_id 7M61 _pdbx_helical_symmetry.number_of_operations 10 _pdbx_helical_symmetry.rotation_per_n_subunits -2.94 _pdbx_helical_symmetry.rise_per_n_subunits 4.81 _pdbx_helical_symmetry.n_subunits_divisor 1 _pdbx_helical_symmetry.dyad_axis no _pdbx_helical_symmetry.circular_symmetry 1 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2021-09-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _em_3d_fitting.entry_id 7M61 _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value 83 _em_3d_fitting.ref_protocol 'AB INITIO MODEL' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7M61 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 26608 _em_3d_reconstruction.resolution 3.8 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.4 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details 'Synthetic hIAPP seeded by hIAPP fibrils extracted from a patient with Type II Diabetes' _em_entity_assembly.name 'hIAPP fibril' _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 7M61 _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.method ? _em_sample_support.film_material ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 298 _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 7M61 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7M61 _em_experiment.id 1 _em_experiment.aggregation_state FILAMENT _em_experiment.reconstruction_method HELICAL _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 1 ? A LYS 1 2 1 Y 1 A CYS 2 ? A CYS 2 3 1 Y 1 A ASN 3 ? A ASN 3 4 1 Y 1 A THR 4 ? A THR 4 5 1 Y 1 A ALA 5 ? A ALA 5 6 1 Y 1 A THR 6 ? A THR 6 7 1 Y 1 A CYS 7 ? A CYS 7 8 1 Y 1 A ALA 8 ? A ALA 8 9 1 Y 1 A THR 9 ? A THR 9 10 1 Y 1 A GLN 10 ? A GLN 10 11 1 Y 1 A ARG 11 ? A ARG 11 12 1 Y 1 A LEU 12 ? A LEU 12 13 1 Y 1 B LYS 1 ? B LYS 1 14 1 Y 1 B CYS 2 ? B CYS 2 15 1 Y 1 B ASN 3 ? B ASN 3 16 1 Y 1 B THR 4 ? B THR 4 17 1 Y 1 B ALA 5 ? B ALA 5 18 1 Y 1 B THR 6 ? B THR 6 19 1 Y 1 B CYS 7 ? B CYS 7 20 1 Y 1 B ALA 8 ? B ALA 8 21 1 Y 1 B THR 9 ? B THR 9 22 1 Y 1 B GLN 10 ? B GLN 10 23 1 Y 1 B ARG 11 ? B ARG 11 24 1 Y 1 B LEU 12 ? B LEU 12 25 1 Y 1 B ALA 13 ? B ALA 13 26 1 Y 1 B ASN 14 ? B ASN 14 27 1 Y 1 B PHE 15 ? B PHE 15 28 1 Y 1 B LEU 16 ? B LEU 16 29 1 Y 1 C LYS 1 ? C LYS 1 30 1 Y 1 C CYS 2 ? C CYS 2 31 1 Y 1 C ASN 3 ? C ASN 3 32 1 Y 1 C THR 4 ? C THR 4 33 1 Y 1 C ALA 5 ? C ALA 5 34 1 Y 1 C THR 6 ? C THR 6 35 1 Y 1 C CYS 7 ? C CYS 7 36 1 Y 1 C ALA 8 ? C ALA 8 37 1 Y 1 C THR 9 ? C THR 9 38 1 Y 1 C GLN 10 ? C GLN 10 39 1 Y 1 C ARG 11 ? C ARG 11 40 1 Y 1 C LEU 12 ? C LEU 12 41 1 Y 1 D LYS 1 ? D LYS 1 42 1 Y 1 D CYS 2 ? D CYS 2 43 1 Y 1 D ASN 3 ? D ASN 3 44 1 Y 1 D THR 4 ? D THR 4 45 1 Y 1 D ALA 5 ? D ALA 5 46 1 Y 1 D THR 6 ? D THR 6 47 1 Y 1 D CYS 7 ? D CYS 7 48 1 Y 1 D ALA 8 ? D ALA 8 49 1 Y 1 D THR 9 ? D THR 9 50 1 Y 1 D GLN 10 ? D GLN 10 51 1 Y 1 D ARG 11 ? D ARG 11 52 1 Y 1 D LEU 12 ? D LEU 12 53 1 Y 1 D ALA 13 ? D ALA 13 54 1 Y 1 D ASN 14 ? D ASN 14 55 1 Y 1 D PHE 15 ? D PHE 15 56 1 Y 1 D LEU 16 ? D LEU 16 57 1 Y 1 E LYS 1 ? E LYS 1 58 1 Y 1 E CYS 2 ? E CYS 2 59 1 Y 1 E ASN 3 ? E ASN 3 60 1 Y 1 E THR 4 ? E THR 4 61 1 Y 1 E ALA 5 ? E ALA 5 62 1 Y 1 E THR 6 ? E THR 6 63 1 Y 1 E CYS 7 ? E CYS 7 64 1 Y 1 E ALA 8 ? E ALA 8 65 1 Y 1 E THR 9 ? E THR 9 66 1 Y 1 E GLN 10 ? E GLN 10 67 1 Y 1 E ARG 11 ? E ARG 11 68 1 Y 1 E LEU 12 ? E LEU 12 69 1 Y 1 F LYS 1 ? F LYS 1 70 1 Y 1 F CYS 2 ? F CYS 2 71 1 Y 1 F ASN 3 ? F ASN 3 72 1 Y 1 F THR 4 ? F THR 4 73 1 Y 1 F ALA 5 ? F ALA 5 74 1 Y 1 F THR 6 ? F THR 6 75 1 Y 1 F CYS 7 ? F CYS 7 76 1 Y 1 F ALA 8 ? F ALA 8 77 1 Y 1 F THR 9 ? F THR 9 78 1 Y 1 F GLN 10 ? F GLN 10 79 1 Y 1 F ARG 11 ? F ARG 11 80 1 Y 1 F LEU 12 ? F LEU 12 81 1 Y 1 F ALA 13 ? F ALA 13 82 1 Y 1 F ASN 14 ? F ASN 14 83 1 Y 1 F PHE 15 ? F PHE 15 84 1 Y 1 F LEU 16 ? F LEU 16 85 1 Y 1 G LYS 1 ? G LYS 1 86 1 Y 1 G CYS 2 ? G CYS 2 87 1 Y 1 G ASN 3 ? G ASN 3 88 1 Y 1 G THR 4 ? G THR 4 89 1 Y 1 G ALA 5 ? G ALA 5 90 1 Y 1 G THR 6 ? G THR 6 91 1 Y 1 G CYS 7 ? G CYS 7 92 1 Y 1 G ALA 8 ? G ALA 8 93 1 Y 1 G THR 9 ? G THR 9 94 1 Y 1 G GLN 10 ? G GLN 10 95 1 Y 1 G ARG 11 ? G ARG 11 96 1 Y 1 G LEU 12 ? G LEU 12 97 1 Y 1 H LYS 1 ? H LYS 1 98 1 Y 1 H CYS 2 ? H CYS 2 99 1 Y 1 H ASN 3 ? H ASN 3 100 1 Y 1 H THR 4 ? H THR 4 101 1 Y 1 H ALA 5 ? H ALA 5 102 1 Y 1 H THR 6 ? H THR 6 103 1 Y 1 H CYS 7 ? H CYS 7 104 1 Y 1 H ALA 8 ? H ALA 8 105 1 Y 1 H THR 9 ? H THR 9 106 1 Y 1 H GLN 10 ? H GLN 10 107 1 Y 1 H ARG 11 ? H ARG 11 108 1 Y 1 H LEU 12 ? H LEU 12 109 1 Y 1 H ALA 13 ? H ALA 13 110 1 Y 1 H ASN 14 ? H ASN 14 111 1 Y 1 H PHE 15 ? H PHE 15 112 1 Y 1 H LEU 16 ? H LEU 16 113 1 Y 1 I LYS 1 ? I LYS 1 114 1 Y 1 I CYS 2 ? I CYS 2 115 1 Y 1 I ASN 3 ? I ASN 3 116 1 Y 1 I THR 4 ? I THR 4 117 1 Y 1 I ALA 5 ? I ALA 5 118 1 Y 1 I THR 6 ? I THR 6 119 1 Y 1 I CYS 7 ? I CYS 7 120 1 Y 1 I ALA 8 ? I ALA 8 121 1 Y 1 I THR 9 ? I THR 9 122 1 Y 1 I GLN 10 ? I GLN 10 123 1 Y 1 I ARG 11 ? I ARG 11 124 1 Y 1 I LEU 12 ? I LEU 12 125 1 Y 1 J LYS 1 ? J LYS 1 126 1 Y 1 J CYS 2 ? J CYS 2 127 1 Y 1 J ASN 3 ? J ASN 3 128 1 Y 1 J THR 4 ? J THR 4 129 1 Y 1 J ALA 5 ? J ALA 5 130 1 Y 1 J THR 6 ? J THR 6 131 1 Y 1 J CYS 7 ? J CYS 7 132 1 Y 1 J ALA 8 ? J ALA 8 133 1 Y 1 J THR 9 ? J THR 9 134 1 Y 1 J GLN 10 ? J GLN 10 135 1 Y 1 J ARG 11 ? J ARG 11 136 1 Y 1 J LEU 12 ? J LEU 12 137 1 Y 1 J ALA 13 ? J ALA 13 138 1 Y 1 J ASN 14 ? J ASN 14 139 1 Y 1 J PHE 15 ? J PHE 15 140 1 Y 1 J LEU 16 ? J LEU 16 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units KILODALTONS/NANOMETER _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.id 1 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.angular_rotation_per_subunit -2.94 _em_helical_entity.axial_rise_per_subunit 4.81 _em_helical_entity.axial_symmetry C1 _em_helical_entity.details ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 45 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode SUPER-RESOLUTION _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 3 _em_image_recording.num_real_images ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' e2helixboxer.py EMAN2 ? 1 ? ? 2 'IMAGE ACQUISITION' ? SerialEM ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? CTFFIND 4.1.8 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? 1 ? 8 OTHER ? ? ? ? ? ? 9 'INITIAL EULER ASSIGNMENT' ? RELION 2 1 ? ? 10 'FINAL EULER ASSIGNMENT' ? RELION 2 1 ? ? 11 CLASSIFICATION ? ? ? 1 ? ? 12 RECONSTRUCTION ? RELION 2 1 ? ? 13 'MODEL REFINEMENT' ? PHENIX real_space_refine ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute on Aging (NIH/NIA)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number AG0543022 _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support microscopy _pdbx_struct_assembly_auth_evidence.details ? #