HEADER METAL BINDING PROTEIN 06-APR-21 7ME6 TITLE STRUCTURE OF THE APO FORM OF YCNI COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN YCNI; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: YCNI, BSU03940; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS CUPREDOXIN, CU-BINDING, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.DAMLE,O.S.FISHER REVDAT 4 03-APR-24 7ME6 1 REMARK REVDAT 3 15-SEP-21 7ME6 1 JRNL REVDAT 2 01-SEP-21 7ME6 1 JRNL REVDAT 1 18-AUG-21 7ME6 0 JRNL AUTH M.S.DAMLE,A.N.SINGH,S.C.PETERS,V.A.SZALAI,O.S.FISHER JRNL TITL THE YCNI PROTEIN FROM BACILLUS SUBTILIS CONTAINS A JRNL TITL 2 COPPER-BINDING DOMAIN. JRNL REF J.BIOL.CHEM. V. 297 01078 2021 JRNL REFN ESSN 1083-351X JRNL PMID 34400169 JRNL DOI 10.1016/J.JBC.2021.101078 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 32328 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.190 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.4820 - 4.9449 1.00 2413 159 0.1951 0.1953 REMARK 3 2 4.9449 - 3.9261 1.00 2236 148 0.1632 0.1812 REMARK 3 3 3.9261 - 3.4302 1.00 2213 146 0.1811 0.2229 REMARK 3 4 3.4302 - 3.1167 1.00 2170 143 0.1927 0.2304 REMARK 3 5 3.1167 - 2.8934 1.00 2175 144 0.2154 0.2573 REMARK 3 6 2.8934 - 2.7229 1.00 2155 141 0.2243 0.2283 REMARK 3 7 2.7229 - 2.5865 1.00 2143 141 0.2142 0.2369 REMARK 3 8 2.5865 - 2.4740 1.00 2153 143 0.2089 0.2202 REMARK 3 9 2.4740 - 2.3787 1.00 2111 139 0.2059 0.2465 REMARK 3 10 2.3787 - 2.2967 1.00 2137 140 0.2121 0.2481 REMARK 3 11 2.2967 - 2.2249 1.00 2128 141 0.2201 0.2854 REMARK 3 12 2.2249 - 2.1613 1.00 2124 140 0.2213 0.2581 REMARK 3 13 2.1613 - 2.1044 1.00 2109 139 0.2322 0.2821 REMARK 3 14 2.1044 - 2.0530 0.98 2061 136 0.2634 0.2934 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2112 REMARK 3 ANGLE : 0.980 2878 REMARK 3 CHIRALITY : 0.062 304 REMARK 3 PLANARITY : 0.007 375 REMARK 3 DIHEDRAL : 11.271 1244 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.8010 -10.8150 9.8391 REMARK 3 T TENSOR REMARK 3 T11: 0.3278 T22: 0.3546 REMARK 3 T33: 0.2254 T12: -0.0481 REMARK 3 T13: -0.0095 T23: 0.0382 REMARK 3 L TENSOR REMARK 3 L11: 9.0398 L22: 9.0168 REMARK 3 L33: 4.5005 L12: -3.0182 REMARK 3 L13: -5.3616 L23: 4.7192 REMARK 3 S TENSOR REMARK 3 S11: -0.2461 S12: 0.5036 S13: -0.4378 REMARK 3 S21: -0.4761 S22: 0.1221 S23: -0.0837 REMARK 3 S31: 0.0987 S32: -0.2616 S33: 0.0863 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.3852 -14.1136 21.4204 REMARK 3 T TENSOR REMARK 3 T11: 0.3022 T22: 0.2429 REMARK 3 T33: 0.2611 T12: -0.0541 REMARK 3 T13: -0.0055 T23: 0.0637 REMARK 3 L TENSOR REMARK 3 L11: 5.7652 L22: 3.7628 REMARK 3 L33: 3.9433 L12: -0.7004 REMARK 3 L13: -1.0710 L23: 0.3853 REMARK 3 S TENSOR REMARK 3 S11: -0.0657 S12: -0.0257 S13: -0.4538 REMARK 3 S21: 0.3199 S22: 0.0586 S23: 0.0723 REMARK 3 S31: 0.5691 S32: -0.1649 S33: 0.0162 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 114 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.2449 -20.3754 3.9552 REMARK 3 T TENSOR REMARK 3 T11: 0.7563 T22: 0.6281 REMARK 3 T33: 0.4295 T12: -0.0581 REMARK 3 T13: -0.0169 T23: -0.1730 REMARK 3 L TENSOR REMARK 3 L11: 5.3136 L22: 2.1430 REMARK 3 L33: 5.1408 L12: 0.7136 REMARK 3 L13: -0.1651 L23: 2.6928 REMARK 3 S TENSOR REMARK 3 S11: -0.2319 S12: 1.7745 S13: -1.2557 REMARK 3 S21: -0.2896 S22: 0.2201 S23: -0.0518 REMARK 3 S31: 1.7162 S32: -0.0066 S33: 0.0120 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 124 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9324 -16.6073 13.9473 REMARK 3 T TENSOR REMARK 3 T11: 0.3786 T22: 0.3261 REMARK 3 T33: 0.4147 T12: -0.1430 REMARK 3 T13: -0.0176 T23: 0.0295 REMARK 3 L TENSOR REMARK 3 L11: 8.4894 L22: 3.3312 REMARK 3 L33: 6.4274 L12: -0.2175 REMARK 3 L13: -4.6614 L23: 0.9059 REMARK 3 S TENSOR REMARK 3 S11: -0.1761 S12: 0.5629 S13: -0.3770 REMARK 3 S21: -0.3634 S22: 0.1626 S23: 0.5180 REMARK 3 S31: 0.1213 S32: -0.4310 S33: 0.1038 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 27 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.5032 -22.4897 42.1840 REMARK 3 T TENSOR REMARK 3 T11: 0.3798 T22: 0.3222 REMARK 3 T33: 0.3413 T12: -0.1019 REMARK 3 T13: -0.0024 T23: 0.0245 REMARK 3 L TENSOR REMARK 3 L11: 8.1099 L22: 9.5054 REMARK 3 L33: 3.6829 L12: -0.0555 REMARK 3 L13: 2.1491 L23: -4.6511 REMARK 3 S TENSOR REMARK 3 S11: 0.3472 S12: -0.2497 S13: -0.2911 REMARK 3 S21: 0.5033 S22: -0.5751 S23: -0.8988 REMARK 3 S31: -0.1047 S32: 0.2375 S33: 0.1815 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 49 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.1493 -10.5803 28.6411 REMARK 3 T TENSOR REMARK 3 T11: 0.3459 T22: 0.2884 REMARK 3 T33: 0.3846 T12: -0.0474 REMARK 3 T13: 0.1203 T23: 0.1016 REMARK 3 L TENSOR REMARK 3 L11: 7.8502 L22: 7.5569 REMARK 3 L33: 7.1362 L12: 1.3566 REMARK 3 L13: 0.3088 L23: -2.5822 REMARK 3 S TENSOR REMARK 3 S11: 0.0528 S12: 1.1339 S13: 0.8391 REMARK 3 S21: -0.1617 S22: -0.1540 S23: 0.0331 REMARK 3 S31: -0.3367 S32: -0.0031 S33: 0.0678 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 62 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.4877 -27.1836 37.8369 REMARK 3 T TENSOR REMARK 3 T11: 0.3643 T22: 0.4350 REMARK 3 T33: 0.6876 T12: -0.0413 REMARK 3 T13: -0.0867 T23: 0.0211 REMARK 3 L TENSOR REMARK 3 L11: 6.0760 L22: 6.7905 REMARK 3 L33: 5.6494 L12: 6.4385 REMARK 3 L13: 5.7401 L23: 6.1025 REMARK 3 S TENSOR REMARK 3 S11: 0.0994 S12: -0.0324 S13: 0.1105 REMARK 3 S21: 0.2140 S22: -0.3806 S23: -1.5819 REMARK 3 S31: -0.0197 S32: 0.8706 S33: 0.2324 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 72 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.8490 -24.7444 26.3384 REMARK 3 T TENSOR REMARK 3 T11: 0.4528 T22: 0.3843 REMARK 3 T33: 0.3220 T12: -0.0390 REMARK 3 T13: 0.1265 T23: -0.0120 REMARK 3 L TENSOR REMARK 3 L11: 3.7998 L22: 6.0740 REMARK 3 L33: 8.7253 L12: 4.1426 REMARK 3 L13: 3.9911 L23: 2.3698 REMARK 3 S TENSOR REMARK 3 S11: -0.6991 S12: 0.5854 S13: -0.2733 REMARK 3 S21: -0.8507 S22: 0.6565 S23: -0.6280 REMARK 3 S31: -0.1513 S32: 0.5257 S33: 0.2236 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 84 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.2005 -18.2847 27.8493 REMARK 3 T TENSOR REMARK 3 T11: 0.4155 T22: 0.4093 REMARK 3 T33: 0.5666 T12: -0.1013 REMARK 3 T13: 0.1105 T23: 0.0646 REMARK 3 L TENSOR REMARK 3 L11: 3.4056 L22: 7.9876 REMARK 3 L33: 7.5411 L12: -4.7045 REMARK 3 L13: 1.0127 L23: -1.6917 REMARK 3 S TENSOR REMARK 3 S11: 0.0667 S12: 1.3796 S13: 1.1908 REMARK 3 S21: -0.3372 S22: -0.4358 S23: -0.9514 REMARK 3 S31: 0.1027 S32: 0.9164 S33: 0.2371 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 105 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.1479 -17.0270 36.5025 REMARK 3 T TENSOR REMARK 3 T11: 0.2894 T22: 0.3313 REMARK 3 T33: 0.3912 T12: -0.0588 REMARK 3 T13: 0.0667 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 5.1143 L22: 6.2248 REMARK 3 L33: 4.3681 L12: 2.1835 REMARK 3 L13: 0.1281 L23: -0.7580 REMARK 3 S TENSOR REMARK 3 S11: 0.3202 S12: 0.1390 S13: 0.2923 REMARK 3 S21: 0.3323 S22: -0.2889 S23: -0.6234 REMARK 3 S31: -0.1173 S32: 0.5543 S33: 0.0129 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 138 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.4822 -12.5425 46.3401 REMARK 3 T TENSOR REMARK 3 T11: 0.6462 T22: 0.4770 REMARK 3 T33: 0.3751 T12: -0.2412 REMARK 3 T13: 0.0224 T23: -0.0413 REMARK 3 L TENSOR REMARK 3 L11: 7.7592 L22: 5.8726 REMARK 3 L33: 8.1766 L12: -1.0135 REMARK 3 L13: -0.7798 L23: -4.3154 REMARK 3 S TENSOR REMARK 3 S11: 0.4629 S12: -0.7623 S13: 0.4398 REMARK 3 S21: 1.9233 S22: -0.1337 S23: -0.3206 REMARK 3 S31: -1.0435 S32: -0.2577 S33: -0.3291 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 28 THROUGH 154) REMARK 3 SELECTION : (CHAIN B AND RESID 28 THROUGH 154) REMARK 3 ATOM PAIRS NUMBER : 1198 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ME6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-APR-21. REMARK 100 THE DEPOSITION ID IS D_1000256029. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : .97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59466 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 39.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.770 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: CU YCNI (TO BE DEPOSITED) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRIC ACID, 2.394 M AMMONIUM REMARK 280 SULFATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 104.23550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 104.23550 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 104.23550 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 104.23550 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 104.23550 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 104.23550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 408 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 433 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 437 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 438 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 440 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 395 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 411 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 412 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA B 155 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 317 O HOH A 406 1.84 REMARK 500 OE1 GLU A 94 O HOH A 301 1.94 REMARK 500 O HOH A 410 O HOH B 394 1.98 REMARK 500 O HOH B 323 O HOH B 385 2.03 REMARK 500 O ASP A 97 O HOH A 302 2.04 REMARK 500 O HOH B 342 O HOH B 392 2.05 REMARK 500 O HOH B 387 O HOH B 401 2.05 REMARK 500 O HOH B 381 O HOH B 397 2.07 REMARK 500 OE1 GLU B 141 O HOH B 301 2.08 REMARK 500 O HOH A 319 O HOH A 395 2.10 REMARK 500 O HOH A 383 O HOH A 399 2.12 REMARK 500 O HOH B 351 O HOH B 385 2.14 REMARK 500 O HOH B 326 O HOH B 402 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS B 117 OD1 ASP B 142 12555 2.10 REMARK 500 O HOH A 392 O HOH A 419 2555 2.11 REMARK 500 O HOH A 328 O HOH A 416 7555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 52 39.05 -78.20 REMARK 500 ASN B 52 28.12 -78.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 439 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH A 440 DISTANCE = 5.93 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLI A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLI B 201 DBREF 7ME6 A 27 155 UNP P94431 YCNI_BACSU 27 155 DBREF 7ME6 B 27 155 UNP P94431 YCNI_BACSU 27 155 SEQRES 1 A 129 HIS VAL SER VAL LYS PRO ALA GLU SER ALA ALA GLY SER SEQRES 2 A 129 TRP GLU THR TYR THR MET LYS VAL PRO SER GLU LYS ASN SEQRES 3 A 129 LEU PRO THR THR LYS VAL VAL LEU LYS MET PRO LYS ASP SEQRES 4 A 129 VAL GLU PHE GLN GLN TYR GLU PRO ILE PRO GLY TRP LYS SEQRES 5 A 129 VAL SER THR GLN LYS HIS ASP ASP LYS SER VAL SER VAL SEQRES 6 A 129 THR TRP GLU ALA THR ASP GLY GLY ILE GLN GLU GLY GLN SEQRES 7 A 129 PHE GLN GLN PHE THR PHE VAL ALA LYS ASN PRO ASP LYS SEQRES 8 A 129 ALA GLU GLU ALA ALA TRP ASP ALA TYR GLN TYR TYR LYS SEQRES 9 A 129 ASP GLY SER ILE VAL GLU TRP THR GLY ASP GLU ASP ALA SEQRES 10 A 129 ASP THR PRO HIS SER ILE THR ASN ILE THR SER ALA SEQRES 1 B 129 HIS VAL SER VAL LYS PRO ALA GLU SER ALA ALA GLY SER SEQRES 2 B 129 TRP GLU THR TYR THR MET LYS VAL PRO SER GLU LYS ASN SEQRES 3 B 129 LEU PRO THR THR LYS VAL VAL LEU LYS MET PRO LYS ASP SEQRES 4 B 129 VAL GLU PHE GLN GLN TYR GLU PRO ILE PRO GLY TRP LYS SEQRES 5 B 129 VAL SER THR GLN LYS HIS ASP ASP LYS SER VAL SER VAL SEQRES 6 B 129 THR TRP GLU ALA THR ASP GLY GLY ILE GLN GLU GLY GLN SEQRES 7 B 129 PHE GLN GLN PHE THR PHE VAL ALA LYS ASN PRO ASP LYS SEQRES 8 B 129 ALA GLU GLU ALA ALA TRP ASP ALA TYR GLN TYR TYR LYS SEQRES 9 B 129 ASP GLY SER ILE VAL GLU TRP THR GLY ASP GLU ASP ALA SEQRES 10 B 129 ASP THR PRO HIS SER ILE THR ASN ILE THR SER ALA HET MLI A 201 7 HET MLI B 201 7 HETNAM MLI MALONATE ION FORMUL 3 MLI 2(C3 H2 O4 2-) FORMUL 5 HOH *252(H2 O) SHEET 1 AA1 4 SER A 29 LYS A 31 0 SHEET 2 AA1 4 TRP A 40 PRO A 48 -1 O LYS A 46 N SER A 29 SHEET 3 AA1 4 PHE A 105 LYS A 113 -1 O PHE A 108 N MET A 45 SHEET 4 AA1 4 GLU A 67 TYR A 71 -1 N GLN A 70 O VAL A 111 SHEET 1 AA2 3 GLU A 34 ALA A 36 0 SHEET 2 AA2 3 SER A 148 THR A 153 1 O ASN A 151 N SER A 35 SHEET 3 AA2 3 GLU A 119 TRP A 123 -1 N TRP A 123 O SER A 148 SHEET 1 AA3 5 TRP A 77 LYS A 83 0 SHEET 2 AA3 5 VAL A 89 ALA A 95 -1 O THR A 92 N SER A 80 SHEET 3 AA3 5 THR A 55 LYS A 61 -1 N LEU A 60 O VAL A 91 SHEET 4 AA3 5 ALA A 125 TYR A 129 -1 O TYR A 128 N LYS A 57 SHEET 5 AA3 5 ILE A 134 TRP A 137 -1 O TRP A 137 N ALA A 125 SHEET 1 AA4 4 SER B 29 LYS B 31 0 SHEET 2 AA4 4 TRP B 40 PRO B 48 -1 O THR B 44 N LYS B 31 SHEET 3 AA4 4 PHE B 105 LYS B 113 -1 O PHE B 108 N MET B 45 SHEET 4 AA4 4 GLU B 67 TYR B 71 -1 N GLN B 69 O VAL B 111 SHEET 1 AA5 3 GLU B 34 ALA B 36 0 SHEET 2 AA5 3 SER B 148 THR B 153 1 O ASN B 151 N SER B 35 SHEET 3 AA5 3 GLU B 119 TRP B 123 -1 N TRP B 123 O SER B 148 SHEET 1 AA6 5 TRP B 77 LYS B 83 0 SHEET 2 AA6 5 VAL B 89 ALA B 95 -1 O THR B 92 N SER B 80 SHEET 3 AA6 5 THR B 55 LYS B 61 -1 N LEU B 60 O VAL B 91 SHEET 4 AA6 5 ALA B 125 TYR B 129 -1 O TYR B 126 N VAL B 59 SHEET 5 AA6 5 ILE B 134 TRP B 137 -1 O VAL B 135 N GLN B 127 CISPEP 1 LYS A 31 PRO A 32 0 8.77 CISPEP 2 LYS B 31 PRO B 32 0 8.51 SITE 1 AC1 5 HIS A 27 GLU A 50 ALA A 155 HOH A 356 SITE 2 AC1 5 HOH A 385 SITE 1 AC2 6 HIS B 27 TRP B 40 GLU B 50 HOH B 311 SITE 2 AC2 6 HOH B 371 HOH B 382 CRYST1 90.425 90.425 208.471 90.00 90.00 120.00 P 63 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011059 0.006385 0.000000 0.00000 SCALE2 0.000000 0.012770 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004797 0.00000