HEADER IMMUNE SYSTEM 08-APR-21 7MFB TITLE CRYSTAL STRUCTURE OF ANTIBODY 10E8V4 FAB - LIGHT CHAIN H31F VARIANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIBODY 10E8V4 FAB HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTIBODY 10E8V4 FAB LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IGHV3-15*05; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: EXPI293F; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PVRC8400; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 GENE: IGLV3-19*01; SOURCE 17 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 18 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 20 EXPRESSION_SYSTEM_CELL_LINE: EXPI293F; SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PVRC8400 KEYWDS MONOCLONAL ANTIBODY 10E8, MPER, CIS-TRANS ISOMERIZATION, SIZE- KEYWDS 2 EXCLUSION CHROMATOGRAPHY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR Y.D.KWON,P.D.KWONG REVDAT 2 18-OCT-23 7MFB 1 REMARK REVDAT 1 14-JUL-21 7MFB 0 JRNL AUTH Y.DO KWON,X.E.WANG,M.F.BENDER,R.YANG,Y.LI,K.MCKEE,R.RAWI, JRNL AUTH 2 S.O'DELL,N.A.SCHNECK,A.SHADDEAU,B.ZHANG,F.J.ARNOLD, JRNL AUTH 3 M.CONNORS,N.A.DORIA-ROSE,P.D.KWONG,Q.P.LEI JRNL TITL STRUCTURES OF HIV-1 NEUTRALIZING ANTIBODY 10E8 DELINEATE THE JRNL TITL 2 MECHANISTIC BASIS OF ITS MULTI-PEAK BEHAVIOR ON JRNL TITL 3 SIZE-EXCLUSION CHROMATOGRAPHY. JRNL REF ANTIBODIES V. 10 2021 JRNL REFN ISSN 2073-4468 JRNL PMID 34200826 JRNL DOI 10.3390/ANTIB10020023 REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 71.9 REMARK 3 NUMBER OF REFLECTIONS : 39342 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1968 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.0400 - 4.2000 0.70 2673 141 0.2275 0.2373 REMARK 3 2 4.2000 - 3.3400 0.69 2569 136 0.2102 0.2204 REMARK 3 3 3.3400 - 2.9200 0.74 2768 146 0.2153 0.2476 REMARK 3 4 2.9200 - 2.6500 0.84 3144 165 0.2193 0.2565 REMARK 3 5 2.6500 - 2.4600 0.90 3325 175 0.2120 0.2417 REMARK 3 6 2.4600 - 2.3100 0.93 3433 181 0.2169 0.2648 REMARK 3 7 2.3100 - 2.2000 0.92 3416 179 0.2234 0.2396 REMARK 3 8 2.2000 - 2.1000 0.81 2992 158 0.2328 0.2096 REMARK 3 9 2.1000 - 2.0200 0.75 2744 145 0.2250 0.2789 REMARK 3 10 2.0200 - 1.9500 0.68 2514 131 0.2168 0.2883 REMARK 3 11 1.9500 - 1.8900 0.62 2311 123 0.2361 0.2589 REMARK 3 12 1.8900 - 1.8400 0.56 2055 108 0.2426 0.2539 REMARK 3 13 1.8400 - 1.7900 0.51 1876 98 0.2735 0.3109 REMARK 3 14 1.7900 - 1.7400 0.42 1554 82 0.3144 0.2947 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 3406 REMARK 3 ANGLE : 1.315 4646 REMARK 3 CHIRALITY : 0.087 514 REMARK 3 PLANARITY : 0.009 600 REMARK 3 DIHEDRAL : 6.526 475 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN H AND RESI 2:125 REMARK 3 ORIGIN FOR THE GROUP (A): -40.6675 1.3697 28.0111 REMARK 3 T TENSOR REMARK 3 T11: 0.1937 T22: 0.2767 REMARK 3 T33: 0.1498 T12: -0.1005 REMARK 3 T13: 0.0108 T23: -0.0559 REMARK 3 L TENSOR REMARK 3 L11: 2.6234 L22: 1.0169 REMARK 3 L33: 0.0909 L12: 1.3883 REMARK 3 L13: -0.5576 L23: -0.8069 REMARK 3 S TENSOR REMARK 3 S11: 0.1405 S12: -0.3870 S13: 0.0570 REMARK 3 S21: 0.1673 S22: -0.2583 S23: -0.0601 REMARK 3 S31: -0.1150 S32: 0.1670 S33: 0.0814 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN H AND RESI 126:250 REMARK 3 ORIGIN FOR THE GROUP (A): -73.1479 -16.1659 22.3454 REMARK 3 T TENSOR REMARK 3 T11: 0.1771 T22: 0.0531 REMARK 3 T33: 0.1217 T12: 0.0239 REMARK 3 T13: 0.0019 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 1.6496 L22: 1.5877 REMARK 3 L33: 3.2718 L12: -0.0513 REMARK 3 L13: 0.6479 L23: -0.2702 REMARK 3 S TENSOR REMARK 3 S11: 0.0758 S12: 0.0699 S13: -0.0582 REMARK 3 S21: -0.2989 S22: 0.0239 S23: 0.0783 REMARK 3 S31: 0.3130 S32: 0.2003 S33: -0.0703 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN L AND RESI 2:108 REMARK 3 ORIGIN FOR THE GROUP (A): -40.0567 -1.5039 7.9095 REMARK 3 T TENSOR REMARK 3 T11: 0.0997 T22: 0.2013 REMARK 3 T33: 0.1020 T12: 0.0061 REMARK 3 T13: 0.0174 T23: -0.0204 REMARK 3 L TENSOR REMARK 3 L11: 2.6143 L22: 3.0221 REMARK 3 L33: 2.1764 L12: 0.9879 REMARK 3 L13: 0.9019 L23: 1.0023 REMARK 3 S TENSOR REMARK 3 S11: 0.0873 S12: 0.2852 S13: 0.0280 REMARK 3 S21: -0.1360 S22: -0.1337 S23: -0.0994 REMARK 3 S31: -0.1209 S32: 0.2079 S33: 0.0500 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN L AND RESI 110:250 REMARK 3 ORIGIN FOR THE GROUP (A): -70.5858 -3.7419 12.4992 REMARK 3 T TENSOR REMARK 3 T11: 0.2099 T22: 0.0154 REMARK 3 T33: 0.1499 T12: -0.0126 REMARK 3 T13: 0.0248 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 2.9013 L22: 1.3546 REMARK 3 L33: 3.2287 L12: 0.1451 REMARK 3 L13: -0.8822 L23: -0.8948 REMARK 3 S TENSOR REMARK 3 S11: 0.2026 S12: 0.0938 S13: 0.1430 REMARK 3 S21: 0.0424 S22: 0.1792 S23: 0.1219 REMARK 3 S31: -0.3749 S32: 0.0818 S33: -0.1434 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7MFB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-APR-21. REMARK 100 THE DEPOSITION ID IS D_1000256110. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAR-20 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL - LIQUID NITROGEN REMARK 200 COOLED REMARK 200 OPTICS : SI 111. ROSENBAUM-ROCK DOUBLE REMARK 200 -CRYSTAL MONOCHROMATOR: LIQUID REMARK 200 NITROGEN COOLED; SAGITALLY REMARK 200 FOCUSING 2ND CRYSTAL, ROSENBAUM- REMARK 200 ROCK VERTICAL FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48111 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.2 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.59600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5IQ9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG3350, 20% ISO-PROPANOL, 0.1M REMARK 280 TRIS-HCL 8.5, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 70.90000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.11550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 70.90000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.11550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH H 340 LIES ON A SPECIAL POSITION. REMARK 375 HOH L 423 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS H 129 CG CD CE NZ REMARK 470 LYS H 201 CG CD CE NZ REMARK 470 LYS H 206 CG CD CE NZ REMARK 470 LYS H 210 CG CD CE NZ REMARK 470 LYS H 214 CG CD CE NZ REMARK 470 ARG L 95B CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR H 89 O HOH H 304 1.31 REMARK 500 H LEU L 107 O HOH L 301 1.38 REMARK 500 HZ3 LYS H 43 O HOH H 309 1.38 REMARK 500 HZ1 LYS L 103 O HOH L 303 1.48 REMARK 500 HH12 ARG L 70 O HOH L 306 1.48 REMARK 500 HG3 GLU H 148 O HOH H 314 1.56 REMARK 500 H SER H 187 O HOH H 319 1.58 REMARK 500 HE ARG H 94 O HOH H 325 1.58 REMARK 500 O GLN H 105 O HOH H 301 1.81 REMARK 500 O HOH H 507 O HOH L 531 1.81 REMARK 500 O HOH L 306 O HOH L 479 1.83 REMARK 500 N LEU L 107 O HOH L 301 1.84 REMARK 500 N LYS L 16 O HOH L 302 1.85 REMARK 500 O HOH H 323 O HOH H 331 1.85 REMARK 500 O HOH H 476 O HOH H 483 1.86 REMARK 500 O HOH H 367 O HOH H 454 1.86 REMARK 500 O HOH H 407 O HOH H 429 1.86 REMARK 500 OG SER H 17 O HOH H 302 1.87 REMARK 500 O HOH H 423 O HOH H 498 1.94 REMARK 500 NZ LYS L 103 O HOH L 303 1.95 REMARK 500 O LYS L 38 O HOH L 304 1.95 REMARK 500 O HOH L 469 O HOH L 483 1.97 REMARK 500 OD1 ASN H 82A O HOH H 303 1.97 REMARK 500 O HOH L 482 O HOH L 503 2.00 REMARK 500 OE1 GLN L 17 O HOH L 305 2.00 REMARK 500 NH1 ARG L 70 O HOH L 306 2.01 REMARK 500 O HOH L 445 O HOH L 482 2.01 REMARK 500 O HOH L 444 O HOH L 455 2.03 REMARK 500 O HOH L 372 O HOH L 524 2.03 REMARK 500 O HOH H 320 O HOH H 445 2.03 REMARK 500 O HOH H 466 O HOH H 503 2.04 REMARK 500 OH TYR H 89 O HOH H 304 2.04 REMARK 500 O HOH H 413 O HOH H 481 2.04 REMARK 500 O HOH L 421 O HOH L 466 2.04 REMARK 500 O ASN H 73 O HOH H 305 2.04 REMARK 500 NZ LYS H 143 O HOH H 306 2.05 REMARK 500 O HOH H 374 O HOH H 483 2.07 REMARK 500 O HOH L 400 O HOH L 407 2.07 REMARK 500 O HOH L 360 O HOH L 433 2.09 REMARK 500 O HOH H 342 O HOH L 307 2.09 REMARK 500 O HOH H 342 O HOH H 391 2.10 REMARK 500 NZ LYS L 130 O HOH L 307 2.12 REMARK 500 OE2 GLU L 204 O HOH L 308 2.12 REMARK 500 N LEU L 46 O HOH L 309 2.13 REMARK 500 O HOH H 328 O HOH H 475 2.13 REMARK 500 O HOH H 377 O HOH H 395 2.14 REMARK 500 O HOH H 443 O HOH L 514 2.17 REMARK 500 O HOH H 384 O HOH H 414 2.17 REMARK 500 O HOH H 487 O HOH H 501 2.18 REMARK 500 O PRO L 155 O HOH L 310 2.18 REMARK 500 REMARK 500 THIS ENTRY HAS 53 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH H 379 O HOH L 339 2456 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN H 82B 52.27 39.00 REMARK 500 LYS L 16 -5.21 72.52 REMARK 500 PHE L 48 145.73 -172.37 REMARK 500 ASN L 52 35.36 -155.00 REMARK 500 ASP L 152 -115.72 62.56 REMARK 500 REMARK 500 REMARK: NULL DBREF 7MFB H 1 214 PDB 7MFB 7MFB 1 214 DBREF 7MFB L 2 209 PDB 7MFB 7MFB 2 209 SEQRES 1 H 232 GLU VAL ARG LEU VAL GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 H 232 PRO GLY GLY SER LEU ARG LEU SER CYS SER ALA SER GLY SEQRES 3 H 232 PHE ASP PHE ASP ASN ALA TRP MET THR TRP VAL ARG GLN SEQRES 4 H 232 PRO PRO GLY LYS GLY LEU GLU TRP VAL GLY ARG ILE THR SEQRES 5 H 232 GLY PRO GLY GLU GLY TRP SER VAL ASP TYR ALA GLU SER SEQRES 6 H 232 VAL LYS GLY ARG PHE THR ILE SER ARG ASP ASN THR LYS SEQRES 7 H 232 ASN THR LEU TYR LEU GLU MET ASN ASN VAL ARG THR GLU SEQRES 8 H 232 ASP THR GLY TYR TYR PHE CYS ALA ARG THR GLY LYS TYR SEQRES 9 H 232 TYR ASP PHE TRP SER GLY TYR PRO PRO GLY GLU GLU TYR SEQRES 10 H 232 PHE GLN ASP TRP GLY GLN GLY THR LEU VAL ILE VAL SER SEQRES 11 H 232 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 12 H 232 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 13 H 232 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 14 H 232 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 15 H 232 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 16 H 232 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 17 H 232 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 18 H 232 ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 1 L 210 SER GLU LEU THR GLN ASP PRO ALA VAL SER VAL ALA LEU SEQRES 2 L 210 LYS GLN THR VAL THR ILE THR CYS ARG GLY ASP SER LEU SEQRES 3 L 210 ARG SER PHE TYR ALA SER TRP TYR GLN LYS LYS PRO GLY SEQRES 4 L 210 GLN ALA PRO VAL LEU LEU PHE TYR GLY LYS ASN ASN ARG SEQRES 5 L 210 PRO SER GLY ILE PRO ASP ARG PHE SER GLY SER ALA SER SEQRES 6 L 210 GLY ASN ARG ALA SER LEU THR ILE THR GLY ALA GLN ALA SEQRES 7 L 210 GLU ASP GLU ALA ASP TYR TYR CYS SER SER ARG ASP LYS SEQRES 8 L 210 SER GLY SER ARG LEU SER VAL PHE GLY GLY GLY THR LYS SEQRES 9 L 210 LEU THR VAL LEU SER GLN PRO LYS ALA ALA PRO SER VAL SEQRES 10 L 210 THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN ALA ASN SEQRES 11 L 210 LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE TYR PRO SEQRES 12 L 210 GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SER PRO SEQRES 13 L 210 VAL LYS ALA GLY VAL GLU THR THR THR PRO SER LYS GLN SEQRES 14 L 210 SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SER LEU SEQRES 15 L 210 THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SER CYS SEQRES 16 L 210 GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS THR VAL SEQRES 17 L 210 ALA PRO FORMUL 3 HOH *440(H2 O) HELIX 1 AA1 GLY H 52A GLY H 54 5 5 HELIX 2 AA2 ASN H 73 LYS H 75 5 3 HELIX 3 AA3 ARG H 83 THR H 87 5 5 HELIX 4 AA4 SER H 127 LYS H 129 5 3 HELIX 5 AA5 SER H 156 ALA H 158 5 3 HELIX 6 AA6 SER H 187 LEU H 189 5 3 HELIX 7 AA7 LYS H 201 ASN H 204 5 4 HELIX 8 AA8 ASP L 26 SER L 30 5 5 HELIX 9 AA9 GLN L 79 GLU L 83 5 5 HELIX 10 AB1 SER L 122 ALA L 128 1 7 HELIX 11 AB2 THR L 182 HIS L 189 1 8 SHEET 1 AA1 4 ARG H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 AA1 4 THR H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 AA1 4 PHE H 67 ASP H 72 -1 N THR H 68 O GLU H 81 SHEET 1 AA2 6 LEU H 11 VAL H 12 0 SHEET 2 AA2 6 THR H 107 VAL H 111 1 O ILE H 110 N VAL H 12 SHEET 3 AA2 6 GLY H 88 LYS H 97 -1 N GLY H 88 O VAL H 109 SHEET 4 AA2 6 TRP H 33 GLN H 39 -1 N VAL H 37 O PHE H 91 SHEET 5 AA2 6 GLU H 46 ILE H 51 -1 O ILE H 51 N MET H 34 SHEET 6 AA2 6 VAL H 57 TYR H 59 -1 O ASP H 58 N ARG H 50 SHEET 1 AA3 4 LEU H 11 VAL H 12 0 SHEET 2 AA3 4 THR H 107 VAL H 111 1 O ILE H 110 N VAL H 12 SHEET 3 AA3 4 GLY H 88 LYS H 97 -1 N GLY H 88 O VAL H 109 SHEET 4 AA3 4 GLU H 100J TRP H 103 -1 O TYR H 100K N GLY H 96 SHEET 1 AA4 4 SER H 120 LEU H 124 0 SHEET 2 AA4 4 THR H 135 TYR H 145 -1 O LYS H 143 N SER H 120 SHEET 3 AA4 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA4 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AA5 4 THR H 131 SER H 132 0 SHEET 2 AA5 4 THR H 135 TYR H 145 -1 O THR H 135 N SER H 132 SHEET 3 AA5 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA5 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AA6 3 THR H 151 TRP H 154 0 SHEET 2 AA6 3 ILE H 195 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AA6 3 THR H 205 LYS H 210 -1 O VAL H 207 N VAL H 198 SHEET 1 AA7 4 THR L 5 GLN L 6 0 SHEET 2 AA7 4 THR L 18 ARG L 24 -1 O ARG L 24 N THR L 5 SHEET 3 AA7 4 ARG L 70 THR L 76 -1 O ALA L 71 N CYS L 23 SHEET 4 AA7 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA8 5 ALA L 9 ALA L 14 0 SHEET 2 AA8 5 THR L 102 LEU L 107 1 O LEU L 107 N VAL L 13 SHEET 3 AA8 5 ALA L 84 ARG L 91 -1 N ALA L 84 O LEU L 104 SHEET 4 AA8 5 SER L 34 LYS L 38 -1 N LYS L 38 O ASP L 85 SHEET 5 AA8 5 VAL L 45 PHE L 48 -1 O LEU L 47 N TRP L 35 SHEET 1 AA9 4 ALA L 9 ALA L 14 0 SHEET 2 AA9 4 THR L 102 LEU L 107 1 O LEU L 107 N VAL L 13 SHEET 3 AA9 4 ALA L 84 ARG L 91 -1 N ALA L 84 O LEU L 104 SHEET 4 AA9 4 SER L 96 PHE L 98 -1 O VAL L 97 N SER L 90 SHEET 1 AB1 4 SER L 115 PHE L 119 0 SHEET 2 AB1 4 ALA L 131 PHE L 140 -1 O VAL L 134 N PHE L 119 SHEET 3 AB1 4 TYR L 173 LEU L 181 -1 O SER L 177 N CYS L 135 SHEET 4 AB1 4 VAL L 160 THR L 162 -1 N GLU L 161 O TYR L 178 SHEET 1 AB2 4 SER L 115 PHE L 119 0 SHEET 2 AB2 4 ALA L 131 PHE L 140 -1 O VAL L 134 N PHE L 119 SHEET 3 AB2 4 TYR L 173 LEU L 181 -1 O SER L 177 N CYS L 135 SHEET 4 AB2 4 SER L 166 LYS L 167 -1 N SER L 166 O ALA L 174 SHEET 1 AB3 4 SER L 154 VAL L 156 0 SHEET 2 AB3 4 THR L 146 ALA L 151 -1 N TRP L 149 O VAL L 156 SHEET 3 AB3 4 TYR L 192 HIS L 198 -1 O THR L 197 N THR L 146 SHEET 4 AB3 4 SER L 201 VAL L 207 -1 O VAL L 203 N VAL L 196 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.05 SSBOND 2 CYS H 140 CYS H 196 1555 1555 2.05 SSBOND 3 CYS L 23 CYS L 88 1555 1555 1.94 SSBOND 4 CYS L 135 CYS L 194 1555 1555 2.04 CISPEP 1 PHE H 146 PRO H 147 0 -11.38 CISPEP 2 GLU H 148 PRO H 149 0 5.14 CISPEP 3 TYR L 141 PRO L 142 0 -3.37 CRYST1 141.800 56.231 69.261 90.00 100.85 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007052 0.000000 0.001351 0.00000 SCALE2 0.000000 0.017784 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014701 0.00000