HEADER HYDROLASE/INHIBITOR 09-APR-21 7MFK TITLE STRUCTURE OF THE CLOSTRIDIUM PERFRINGENS GH89 IN COMPLEX WITH ALPHA- TITLE 2 HNJNAC COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CPGH89; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM PERFRINGENS (STRAIN ATCC 13124 / SOURCE 3 DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / TYPE A); SOURCE 4 ORGANISM_TAXID: 195103; SOURCE 5 STRAIN: ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / SOURCE 6 TYPE A; SOURCE 7 GENE: CPF_0859; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NAGLU, CLOSTRIDIUM PERFRINGENS, MPS IIIB, INHIBITOR, GH89, GLYCOSIDE KEYWDS 2 HYDROLASE, HYDROLASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.B.BORASTON REVDAT 5 18-OCT-23 7MFK 1 REMARK REVDAT 4 18-AUG-21 7MFK 1 JRNL REVDAT 3 11-AUG-21 7MFK 1 REMARK REVDAT 2 04-AUG-21 7MFK 1 JRNL REVDAT 1 28-JUL-21 7MFK 0 JRNL AUTH S.ZHU,Y.JAGADEESH,A.T.TRAN,S.IMAEDA,A.BORASTON,D.S.ALONZI, JRNL AUTH 2 A.POVEDA,Y.ZHANG,J.DESIRE,J.CHAROLLAIS-THOENIG,S.DEMOTZ, JRNL AUTH 3 A.KATO,T.D.BUTTERS,J.JIMENEZ-BARBERO,M.SOLLOGOUB,Y.BLERIOT JRNL TITL IMINOSUGAR C-GLYCOSIDES WORK AS PHARMACOLOGICAL CHAPERONES JRNL TITL 2 OF NAGLU, A GLYCOSIDASE INVOLVED IN MPS IIIB RARE DISEASE*. JRNL REF CHEMISTRY V. 27 11291 2021 JRNL REFN ISSN 0947-6539 JRNL PMID 34106504 JRNL DOI 10.1002/CHEM.202101408 REMARK 2 REMARK 2 RESOLUTION. 2.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 64936 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 3207 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.6600 - 6.0400 1.00 2729 124 0.1650 0.1997 REMARK 3 2 6.0400 - 4.8000 1.00 2682 165 0.1667 0.1773 REMARK 3 3 4.8000 - 4.2000 1.00 2689 154 0.1617 0.1710 REMARK 3 4 4.2000 - 3.8100 1.00 2683 140 0.1623 0.1694 REMARK 3 5 3.8100 - 3.5400 0.99 2701 130 0.1705 0.2101 REMARK 3 6 3.5400 - 3.3300 0.99 2664 134 0.1832 0.2475 REMARK 3 7 3.3300 - 3.1700 1.00 2697 139 0.1952 0.2346 REMARK 3 8 3.1700 - 3.0300 1.00 2637 168 0.2026 0.2419 REMARK 3 9 3.0300 - 2.9100 1.00 2698 125 0.2001 0.2624 REMARK 3 10 2.9100 - 2.8100 1.00 2701 144 0.1951 0.2597 REMARK 3 11 2.8100 - 2.7200 1.00 2699 116 0.1989 0.2615 REMARK 3 12 2.7200 - 2.6500 1.00 2701 148 0.1977 0.2353 REMARK 3 13 2.6500 - 2.5800 1.00 2644 154 0.1935 0.2457 REMARK 3 14 2.5800 - 2.5100 1.00 2714 136 0.1992 0.2575 REMARK 3 15 2.5100 - 2.4600 1.00 2674 132 0.1966 0.2803 REMARK 3 16 2.4600 - 2.4000 1.00 2749 110 0.2054 0.2397 REMARK 3 17 2.4000 - 2.3600 1.00 2695 131 0.2042 0.2679 REMARK 3 18 2.3600 - 2.3100 1.00 2663 158 0.2023 0.2583 REMARK 3 19 2.3100 - 2.2700 1.00 2669 115 0.2147 0.2873 REMARK 3 20 2.2700 - 2.2300 0.99 2699 142 0.2103 0.2503 REMARK 3 21 2.2300 - 2.2000 0.99 2628 176 0.2225 0.2943 REMARK 3 22 2.2000 - 2.1600 0.99 2653 122 0.2344 0.3206 REMARK 3 23 2.1600 - 2.1300 0.98 2660 144 0.2521 0.3138 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.258 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.506 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.35 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7356 REMARK 3 ANGLE : 0.623 9968 REMARK 3 CHIRALITY : 0.043 1023 REMARK 3 PLANARITY : 0.003 1306 REMARK 3 DIHEDRAL : 4.046 5978 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7MFK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-APR-21. REMARK 100 THE DEPOSITION ID IS D_1000256132. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-002 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65218 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.130 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2VCB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE, 3% GLYCEROL, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.09700 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 168.19400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 126.14550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 210.24250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 42.04850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 HIS A 20 REMARK 465 MET A 21 REMARK 465 ALA A 22 REMARK 465 SER A 23 REMARK 465 SER A 24 REMARK 465 THR A 25 REMARK 465 LEU A 911 REMARK 465 GLY A 912 REMARK 465 GLU A 913 REMARK 465 ASN A 914 REMARK 465 GLU A 915 REMARK 465 SER A 916 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 31 CG CD OE1 OE2 REMARK 470 ASP A 125 CG OD1 OD2 REMARK 470 GLU A 163 CG CD OE1 OE2 REMARK 470 LYS A 165 CG CD CE NZ REMARK 470 LYS A 166 CG CD CE NZ REMARK 470 ARG A 209 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 277 CG CD OE1 OE2 REMARK 470 LYS A 642 CG CD CE NZ REMARK 470 GLU A 750 CG CD OE1 OE2 REMARK 470 LYS A 909 CG CD CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 155 CG CD REMARK 480 ASP A 213 OD1 OD2 REMARK 480 VAL A 231 CA CB CG1 CG2 REMARK 480 GLU A 463 CD REMARK 480 ILE A 679 CG2 REMARK 480 GLU A 738 OE1 OE2 REMARK 480 LYS A 764 CE NZ REMARK 480 GLU A 835 CG CD REMARK 480 ASN A 861 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 689 O HOH A 1101 2.17 REMARK 500 O HOH A 1632 O HOH A 1642 2.17 REMARK 500 O HOH A 1346 O HOH A 1775 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 62 -155.81 -150.25 REMARK 500 ASP A 86 -158.69 -152.81 REMARK 500 ASP A 125 59.16 -92.98 REMARK 500 LEU A 298 138.35 106.12 REMARK 500 THR A 306 -52.39 -124.40 REMARK 500 LEU A 407 -159.38 -82.04 REMARK 500 GLN A 518 64.04 31.29 REMARK 500 VAL A 544 -47.57 -130.93 REMARK 500 ASP A 547 38.74 -144.77 REMARK 500 HIS A 564 -55.48 66.40 REMARK 500 ASN A 604 -2.59 -147.70 REMARK 500 ASN A 606 70.66 43.10 REMARK 500 THR A 654 -88.74 -122.18 REMARK 500 SER A 681 155.94 177.17 REMARK 500 THR A 809 -100.19 -126.89 REMARK 500 TRP A 811 -67.74 69.89 REMARK 500 ASP A 818 -76.24 -95.34 REMARK 500 TYR A 837 -66.00 -124.22 REMARK 500 ASP A 879 -83.61 -99.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1002 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 48 O REMARK 620 2 ASP A 51 OD1 84.8 REMARK 620 3 ASP A 53 O 165.8 93.6 REMARK 620 4 THR A 56 O 89.5 142.7 83.2 REMARK 620 5 THR A 56 OG1 85.1 69.3 81.2 73.5 REMARK 620 6 ALA A 148 O 85.1 138.5 105.0 77.2 149.2 REMARK 620 7 GLU A 149 OE2 96.6 70.8 96.1 146.5 139.7 70.6 REMARK 620 N 1 2 3 4 5 6 DBREF1 7MFK A 24 916 UNP A0A0H2YU91_CLOP1 DBREF2 7MFK A A0A0H2YU91 24 916 SEQADV 7MFK GLY A 18 UNP A0A0H2YU9 EXPRESSION TAG SEQADV 7MFK SER A 19 UNP A0A0H2YU9 EXPRESSION TAG SEQADV 7MFK HIS A 20 UNP A0A0H2YU9 EXPRESSION TAG SEQADV 7MFK MET A 21 UNP A0A0H2YU9 EXPRESSION TAG SEQADV 7MFK ALA A 22 UNP A0A0H2YU9 EXPRESSION TAG SEQADV 7MFK SER A 23 UNP A0A0H2YU9 EXPRESSION TAG SEQRES 1 A 899 GLY SER HIS MET ALA SER SER THR GLY VAL GLU ILE THR SEQRES 2 A 899 GLU GLY VAL THR VAL THR ALA LYS GLY ASN THR GLU GLY SEQRES 3 A 899 ASN THR ALA ASP LEU ALA ILE ASP GLY ASP LEU SER THR SEQRES 4 A 899 TYR TRP GLU SER SER ASN ASP TYR LYS TRP ILE GLU VAL SEQRES 5 A 899 ASP LEU GLY GLY ILE TYR GLU LEU SER LYS ILE GLU ILE SEQRES 6 A 899 PHE ASN LYS ASP GLU ALA VAL TYR LYS TYR ASN ILE TYR SEQRES 7 A 899 ALA SER GLU ASP GLY GLU ASN PHE ASN LYS ILE ALA TYR SEQRES 8 A 899 LYS ASN ASN ASP ASN VAL SER ASP SER ASN GLY ASN MET SEQRES 9 A 899 HIS THR ILE ASP ASN VAL ARG ALA GLY LYS ILE ARG ILE SEQRES 10 A 899 ASP VAL VAL GLN ASN SER ASN SER ASP ARG VAL ASN ILE SEQRES 11 A 899 ALA GLU ILE ASN VAL PHE GLY LYS ASN THR GLY GLU SER SEQRES 12 A 899 LEU PRO GLU VAL LYS LYS ILE ALA THR SER ASN PHE SER SEQRES 13 A 899 GLU THR PRO TRP ALA THR GLU TYR GLU LYS PHE ASN SER SEQRES 14 A 899 ASP SER ALA TYR ALA ASN GLU LYS THR LEU ASN GLU ILE SEQRES 15 A 899 LYS ASN LEU VAL GLY ARG VAL ILE GLY ARG GLU PHE LYS SEQRES 16 A 899 ASP LYS PHE ILE PHE GLU ILE ARG ASP GLN LEU ASN GLY SEQRES 17 A 899 ASN ASP VAL PHE GLU VAL SER ASP SER GLY ASP GLY LYS SEQRES 18 A 899 VAL LEU ILE LYS GLY ASN ASN GLY VAL SER LEU ALA SER SEQRES 19 A 899 GLY PHE ASN TYR TYR LEU LYS ASN TYR CYS ASN VAL SER SEQRES 20 A 899 TYR ASN PRO ILE MET GLY SER ASN LEU LYS MET PRO GLU SEQRES 21 A 899 THR MET PRO SER VAL GLY GLU ARG VAL VAL ILE ASP THR SEQRES 22 A 899 PRO TYR GLU HIS ARG TYR ALA LEU ASN PHE CYS THR TYR SEQRES 23 A 899 SER TYR THR MET SER PHE TRP ASP TRP ASP GLN TYR GLU SEQRES 24 A 899 GLU PHE LEU ASP TRP CYS ALA MET ASN GLY VAL ASN LEU SEQRES 25 A 899 VAL LEU ASP ILE ILE GLY GLN GLU GLU VAL LEU ARG ARG SEQRES 26 A 899 THR LEU ASN GLU PHE GLY TYR SER ASP GLU GLU VAL LYS SEQRES 27 A 899 GLU PHE ILE SER GLY PRO ALA TYR PHE ALA TRP PHE TYR SEQRES 28 A 899 MET GLN ASN MET THR GLY PHE GLY GLY PRO LEU PRO ASN SEQRES 29 A 899 ASP TRP PHE GLU GLN ARG ALA GLU LEU GLY ARG LYS MET SEQRES 30 A 899 HIS ASP ARG MET GLN SER PHE GLY ILE ASN PRO VAL LEU SEQRES 31 A 899 GLN GLY TYR SER GLY MET VAL PRO ARG ASP PHE LYS GLU SEQRES 32 A 899 LYS ASN GLN GLU ALA GLN THR ILE SER GLN GLY GLY TRP SEQRES 33 A 899 CYS GLY PHE ASP ARG PRO ASP MET LEU LYS THR TYR VAL SEQRES 34 A 899 ASN GLU GLY GLU ALA ASP TYR PHE GLN LYS VAL ALA ASP SEQRES 35 A 899 VAL PHE TYR GLU LYS GLN LYS GLU VAL PHE GLY ASP VAL SEQRES 36 A 899 THR ASN PHE TYR GLY VAL ASP PRO PHE HIS GLU GLY GLY SEQRES 37 A 899 ASN THR GLY ASP LEU ASP ASN GLY LYS ILE TYR GLU ILE SEQRES 38 A 899 ILE GLN ASN LYS MET ILE GLU HIS ASP ASN ASP ALA VAL SEQRES 39 A 899 TRP VAL ILE GLN ASN TRP GLN GLY ASN PRO SER ASN ASN SEQRES 40 A 899 LYS LEU GLU GLY LEU THR LYS LYS ASP GLN ALA MET VAL SEQRES 41 A 899 LEU ASP LEU PHE SER GLU VAL SER PRO ASP TRP ASN ARG SEQRES 42 A 899 LEU GLU GLU ARG ASP LEU PRO TRP ILE TRP ASN MET LEU SEQRES 43 A 899 HIS ASN PHE GLY GLY ARG MET GLY MET ASP ALA ALA PRO SEQRES 44 A 899 GLU LYS LEU ALA THR GLU ILE PRO LYS ALA LEU ALA ASN SEQRES 45 A 899 SER GLU HIS MET VAL GLY ILE GLY ILE THR PRO GLU ALA SEQRES 46 A 899 ILE ASN THR ASN PRO LEU ALA TYR GLU LEU LEU PHE ASP SEQRES 47 A 899 MET ALA TRP THR ARG ASP GLN ILE ASN PHE ARG THR TRP SEQRES 48 A 899 THR GLU ASP TYR ILE GLU ARG ARG TYR GLY LYS THR ASN SEQRES 49 A 899 LYS GLU ILE LEU GLU ALA TRP ASN ILE ILE LEU ASP THR SEQRES 50 A 899 ALA TYR LYS LYS ARG ASN ASP TYR TYR GLN GLY ALA ALA SEQRES 51 A 899 GLU SER ILE ILE ASN ALA ARG PRO GLY PHE GLY ILE LYS SEQRES 52 A 899 SER ALA SER THR TRP GLY HIS SER LYS ILE VAL TYR ASP SEQRES 53 A 899 LYS SER GLU PHE GLU LYS ALA ILE GLU ILE PHE ALA LYS SEQRES 54 A 899 ASN TYR ASP GLU PHE LYS ASP SER ASP ALA PHE LEU TYR SEQRES 55 A 899 ASP PHE ALA ASP ILE LEU LYS GLN LEU LEU ALA ASN SER SEQRES 56 A 899 ALA GLN GLU TYR TYR GLU VAL MET CYS ASN ALA TYR ASN SEQRES 57 A 899 ASN GLY ASN GLY GLU LYS PHE LYS PHE VAL SER GLY LYS SEQRES 58 A 899 PHE LEU GLU LEU ILE LYS LEU GLN GLU ARG VAL LEU SER SEQRES 59 A 899 THR ARG PRO GLU PHE LEU ILE GLY ASN TRP ILE GLU ASP SEQRES 60 A 899 ALA ARG THR MET LEU LYS ASP SER ASP ASP TRP THR LYS SEQRES 61 A 899 ASP LEU PHE GLU PHE ASN ALA ARG ALA LEU VAL THR THR SEQRES 62 A 899 TRP GLY SER ARG ASN ASN ALA ASP GLY GLY GLY LEU LYS SEQRES 63 A 899 ASP TYR SER ASN ARG GLN TRP SER GLY LEU THR GLU ASP SEQRES 64 A 899 TYR TYR TYR ALA ARG TRP GLU LYS TRP ILE ASN GLY LEU SEQRES 65 A 899 GLN ALA GLU LEU ASP GLY GLY ALA LYS ALA PRO ASN ILE SEQRES 66 A 899 ASP TRP PHE LYS MET GLU TYR ASP TRP VAL ASN LYS LYS SEQRES 67 A 899 SER ASP THR ASP LYS LEU TYR PRO THR GLU ALA SER ASN SEQRES 68 A 899 GLU ASN LEU GLY GLU LEU ALA LYS ILE ALA MET GLU SER SEQRES 69 A 899 TYR SER VAL THR ASN MET ASP LYS ILE LEU GLY GLU ASN SEQRES 70 A 899 GLU SER HET EDO A1001 4 HET CA A1002 1 HET SO4 A1003 5 HET SO4 A1004 5 HET SO4 A1005 5 HET SO4 A1006 5 HET SO4 A1007 5 HET SO4 A1008 5 HET EDO A1009 4 HET Z7S A1010 16 HETNAM EDO 1,2-ETHANEDIOL HETNAM CA CALCIUM ION HETNAM SO4 SULFATE ION HETNAM Z7S N-[(2S,3S,4R,5R,6R)-4,5-DIHYDROXY-2,6- HETNAM 2 Z7S BIS(HYDROXYMETHYL)PIPERIDIN-3-YL]ACETAMIDE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 2(C2 H6 O2) FORMUL 3 CA CA 2+ FORMUL 4 SO4 6(O4 S 2-) FORMUL 11 Z7S C9 H18 N2 O5 FORMUL 12 HOH *759(H2 O) HELIX 1 AA1 THR A 45 ILE A 50 5 6 HELIX 2 AA2 ASN A 171 GLU A 174 5 4 HELIX 3 AA3 THR A 175 ASP A 187 1 13 HELIX 4 AA4 ASP A 187 GLY A 208 1 22 HELIX 5 AA5 ARG A 209 ASP A 213 5 5 HELIX 6 AA6 ASN A 245 CYS A 261 1 17 HELIX 7 AA7 CYS A 301 THR A 306 1 6 HELIX 8 AA8 ASP A 311 ASN A 325 1 15 HELIX 9 AA9 GLY A 335 GLU A 346 1 12 HELIX 10 AB1 SER A 350 ILE A 358 1 9 HELIX 11 AB2 TYR A 363 MET A 369 1 7 HELIX 12 AB3 ASP A 382 GLY A 402 1 21 HELIX 13 AB4 ASP A 417 ASN A 422 1 6 HELIX 14 AB5 ASP A 452 GLY A 470 1 19 HELIX 15 AB6 ASP A 491 ASP A 507 1 17 HELIX 16 AB7 SER A 522 GLU A 527 1 6 HELIX 17 AB8 LYS A 531 ASP A 533 5 3 HELIX 18 AB9 TRP A 548 ARG A 554 1 7 HELIX 19 AC1 ALA A 575 ASN A 589 1 15 HELIX 20 AC2 ASN A 606 MET A 616 1 11 HELIX 21 AC3 ALA A 617 THR A 619 5 3 HELIX 22 AC4 ASN A 624 GLY A 638 1 15 HELIX 23 AC5 ASN A 641 THR A 654 1 14 HELIX 24 AC6 SER A 669 ALA A 673 5 5 HELIX 25 AC7 ASP A 693 ASN A 707 1 15 HELIX 26 AC8 ASN A 707 LYS A 712 1 6 HELIX 27 AC9 SER A 714 ASN A 746 1 33 HELIX 28 AD1 ASN A 748 SER A 771 1 24 HELIX 29 AD2 THR A 772 PHE A 776 5 5 HELIX 30 AD3 LEU A 777 MET A 788 1 12 HELIX 31 AD4 ASP A 793 VAL A 808 1 16 HELIX 32 AD5 SER A 813 ASP A 818 1 6 HELIX 33 AD6 GLY A 832 TYR A 837 1 6 HELIX 34 AD7 TYR A 837 ASP A 854 1 18 HELIX 35 AD8 ASP A 863 ASN A 873 1 11 HELIX 36 AD9 ASN A 890 TYR A 902 1 13 SHEET 1 AA1 4 VAL A 27 GLU A 28 0 SHEET 2 AA1 4 GLU A 149 ASN A 156 -1 O GLY A 154 N VAL A 27 SHEET 3 AA1 4 TRP A 66 PHE A 83 -1 N SER A 78 O PHE A 153 SHEET 4 AA1 4 THR A 34 ALA A 37 -1 N THR A 34 O ASP A 70 SHEET 1 AA2 6 VAL A 27 GLU A 28 0 SHEET 2 AA2 6 GLU A 149 ASN A 156 -1 O GLY A 154 N VAL A 27 SHEET 3 AA2 6 TRP A 66 PHE A 83 -1 N SER A 78 O PHE A 153 SHEET 4 AA2 6 ASN A 120 ASN A 139 -1 O ILE A 124 N SER A 78 SHEET 5 AA2 6 TYR A 90 SER A 97 -1 N SER A 97 O GLY A 130 SHEET 6 AA2 6 ASN A 104 LYS A 109 -1 O ALA A 107 N ILE A 94 SHEET 1 AA3 2 TRP A 58 GLU A 59 0 SHEET 2 AA3 2 ASN A 146 ILE A 147 -1 O ILE A 147 N TRP A 58 SHEET 1 AA4 4 PHE A 215 ILE A 219 0 SHEET 2 AA4 4 VAL A 239 GLY A 243 1 O VAL A 239 N ILE A 216 SHEET 3 AA4 4 VAL A 228 ASP A 233 -1 N SER A 232 O LEU A 240 SHEET 4 AA4 4 VAL A 286 ASP A 289 -1 O ILE A 288 N PHE A 229 SHEET 1 AA5 9 HIS A 294 ALA A 297 0 SHEET 2 AA5 9 LEU A 329 LEU A 331 1 O LEU A 329 N ALA A 297 SHEET 3 AA5 9 ASN A 404 GLN A 408 1 O ASN A 404 N VAL A 330 SHEET 4 AA5 9 PHE A 475 GLY A 477 1 O GLY A 477 N LEU A 407 SHEET 5 AA5 9 VAL A 511 ASN A 516 1 O VAL A 513 N TYR A 476 SHEET 6 AA5 9 ALA A 535 ASP A 539 1 O LEU A 538 N ILE A 514 SHEET 7 AA5 9 TRP A 558 MET A 562 1 O ILE A 559 N ASP A 539 SHEET 8 AA5 9 MET A 593 ILE A 598 1 O VAL A 594 N TRP A 558 SHEET 9 AA5 9 HIS A 294 ALA A 297 1 N TYR A 296 O ILE A 596 SHEET 1 AA6 3 MET A 413 VAL A 414 0 SHEET 2 AA6 3 ASP A 440 LEU A 442 -1 O ASP A 440 N VAL A 414 SHEET 3 AA6 3 THR A 427 ILE A 428 -1 N ILE A 428 O MET A 441 SHEET 1 AA7 2 GLY A 432 TRP A 433 0 SHEET 2 AA7 2 PHE A 436 ASP A 437 -1 O PHE A 436 N TRP A 433 LINK O LEU A 48 CA CA A1002 1555 1555 2.24 LINK OD1 ASP A 51 CA CA A1002 1555 1555 2.50 LINK O ASP A 53 CA CA A1002 1555 1555 2.32 LINK O THR A 56 CA CA A1002 1555 1555 2.32 LINK OG1 THR A 56 CA CA A1002 1555 1555 2.65 LINK O ALA A 148 CA CA A1002 1555 1555 2.49 LINK OE2 GLU A 149 CA CA A1002 1555 1555 2.34 CISPEP 1 GLY A 377 PRO A 378 0 -0.23 CISPEP 2 ASN A 520 PRO A 521 0 -1.04 CRYST1 90.610 90.610 252.291 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011036 0.006372 0.000000 0.00000 SCALE2 0.000000 0.012744 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003964 0.00000