HEADER SUGAR BINDING PROTEIN/DNA 12-APR-21 7MG9 TITLE CONCANAVALIN A BOUND TO DNA GLYCOCONJUGATES, MAN-TTTT AND MAN-AAAA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONCANAVALIN-A; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CON A,CON A; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'-D(P*AP*AP*AP*A)-3'); COMPND 7 CHAIN: C; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DNA (5'-D(P*TP*TP*TP*T)-3'); COMPND 11 CHAIN: D; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANAVALIA ENSIFORMIS; SOURCE 3 ORGANISM_COMMON: JACK BEAN, DOLICHOS ENSIFORMIS; SOURCE 4 ORGANISM_TAXID: 3823; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630; SOURCE 9 MOL_ID: 3; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 12 ORGANISM_TAXID: 32630 KEYWDS LECTIN, DNA COMPLEX, SUGAR BINDING PROTEIN, SUGAR BINDING PROTEIN-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR B.E.PARTRIDGE,P.H.WINEGAR,C.A.MIRKIN REVDAT 3 18-OCT-23 7MG9 1 REMARK REVDAT 2 14-JUL-21 7MG9 1 JRNL REVDAT 1 16-JUN-21 7MG9 0 JRNL AUTH B.E.PARTRIDGE,P.H.WINEGAR,Z.HAN,C.A.MIRKIN JRNL TITL REDEFINING PROTEIN INTERFACES WITHIN PROTEIN SINGLE CRYSTALS JRNL TITL 2 WITH DNA. JRNL REF J.AM.CHEM.SOC. V. 143 8925 2021 JRNL REFN ESSN 1520-5126 JRNL PMID 34096291 JRNL DOI 10.1021/JACS.1C04191 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 3 NUMBER OF REFLECTIONS : 17243 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.253 REMARK 3 R VALUE (WORKING SET) : 0.250 REMARK 3 FREE R VALUE : 0.314 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 899 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1291 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.3610 REMARK 3 BIN FREE R VALUE SET COUNT : 69 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3396 REMARK 3 NUCLEIC ACID ATOMS : 164 REMARK 3 HETEROGEN ATOMS : 68 REMARK 3 SOLVENT ATOMS : 150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.33000 REMARK 3 B22 (A**2) : 1.28000 REMARK 3 B33 (A**2) : -1.61000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.892 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.390 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.376 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.314 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.860 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.794 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3752 ; 0.008 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3153 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5126 ; 1.503 ; 1.608 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7316 ; 1.263 ; 1.611 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 461 ; 8.097 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 156 ;35.009 ;23.205 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 477 ;15.947 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;12.445 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 511 ; 0.153 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4154 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 765 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1852 ; 2.330 ; 3.307 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1851 ; 2.323 ; 3.305 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2306 ; 3.826 ; 4.955 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2307 ; 3.828 ; 4.957 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1900 ; 2.833 ; 3.970 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1901 ; 2.833 ; 3.969 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2816 ; 4.489 ; 5.884 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 15226 ; 7.579 ;66.740 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 15184 ; 7.559 ;66.728 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 237 B 1 237 6771 0.07 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 7MG9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-APR-21. REMARK 100 THE DEPOSITION ID IS D_1000256177. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17243 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 70.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 200 DATA REDUNDANCY : 3.250 REMARK 200 R MERGE (I) : 0.18000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.9147 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.58000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5CNA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SITTING DROP COMPRISING 1 UL OF REMARK 280 CONCANAVALIN A (32 UM), MAN-TTTT (64 UM), AND MAN-AAAA (64 UM) + REMARK 280 1 UL CRYSTALLIZATION CONDITION (HELIX SCREEN, CONDITION B5: 0.1 REMARK 280 M LITHIUM CHLORIDE, 0.01 M MANGANESE(II) CHLORIDE TETRAHYDRATE, REMARK 280 0.05 M MES (PH 6.5), 17% W/V PEG 4000). RESERVOIR CONTAINED 70 REMARK 280 UL OF CRYSTALLIZATION CONDITION, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 32.98950 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.21000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 32.98950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 62.21000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 405 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 117 REMARK 465 ASN A 118 REMARK 465 SER A 119 REMARK 465 THR A 120 REMARK 465 HIS A 121 REMARK 465 GLU A 122 REMARK 465 ASN B 118 REMARK 465 SER B 119 REMARK 465 THR B 120 REMARK 465 HIS B 121 REMARK 465 GLU B 122 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 25 CD1 REMARK 470 LYS A 36 CE NZ REMARK 470 LYS A 39 CD CE NZ REMARK 470 ASN A 41 CG OD1 ND2 REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 VAL A 84 CG1 CG2 REMARK 470 LEU A 99 CG CD1 CD2 REMARK 470 LYS A 101 CE NZ REMARK 470 LYS A 114 CE NZ REMARK 470 LYS A 116 CG CD CE NZ REMARK 470 LYS A 135 CG CD CE NZ REMARK 470 ASP A 151 CB CG OD1 OD2 REMARK 470 ASN A 162 CG OD1 ND2 REMARK 470 SER A 164 OG REMARK 470 VAL A 170 CG1 CG2 REMARK 470 ILE A 181 CG1 CG2 CD1 REMARK 470 SER A 184 OG REMARK 470 SER A 185 CB OG REMARK 470 LYS A 200 CG CD CE NZ REMARK 470 ASP A 203 CB CG OD1 OD2 REMARK 470 SER A 204 CB OG REMARK 470 HIS A 205 CB CG ND1 CD2 CE1 NE2 REMARK 470 ILE A 214 CG1 CG2 CD1 REMARK 470 ASP B 16 CB CG OD1 OD2 REMARK 470 ILE B 25 CG1 CG2 CD1 REMARK 470 ILE B 27 CG1 CG2 CD1 REMARK 470 LYS B 30 CE NZ REMARK 470 LYS B 46 CB CG CD CE NZ REMARK 470 LYS B 59 CE NZ REMARK 470 ASN B 69 CB CG OD1 ND2 REMARK 470 LYS B 101 CD CE NZ REMARK 470 SER B 108 OG REMARK 470 LYS B 114 CG CD CE NZ REMARK 470 LYS B 116 CD CE NZ REMARK 470 SER B 117 CB OG REMARK 470 LYS B 135 CB CG CD CE NZ REMARK 470 LYS B 138 NZ REMARK 470 THR B 150 CB OG1 CG2 REMARK 470 ASP B 151 CB CG OD1 OD2 REMARK 470 ARG B 158 CG CD NE CZ NH1 NH2 REMARK 470 SER B 184 OG REMARK 470 ILE B 199 CG1 CG2 CD1 REMARK 470 LYS B 200 CD CE NZ REMARK 470 ASP B 203 CB CG OD1 OD2 REMARK 470 SER B 204 CB OG REMARK 470 ILE B 214 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 104 64.18 -112.28 REMARK 500 SER A 225 34.33 -80.86 REMARK 500 PRO B 68 129.25 -34.48 REMARK 500 ASN B 104 62.88 -111.64 REMARK 500 SER B 185 49.06 -89.10 REMARK 500 ASP B 203 152.34 87.69 REMARK 500 SER B 204 36.49 -90.35 REMARK 500 SER B 225 35.03 -84.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 8 OE2 REMARK 620 2 ASP A 10 OD2 110.6 REMARK 620 3 ASP A 19 OD1 145.5 98.9 REMARK 620 4 HIS A 24 NE2 95.9 94.3 99.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 10 OD1 REMARK 620 2 ASP A 10 OD2 57.5 REMARK 620 3 TYR A 12 O 82.7 114.2 REMARK 620 4 ASN A 14 OD1 150.2 152.2 81.2 REMARK 620 5 ASP A 19 OD2 113.7 64.7 94.0 92.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 8 OE2 REMARK 620 2 ASP B 10 OD2 112.0 REMARK 620 3 ASP B 19 OD1 143.2 97.4 REMARK 620 4 HIS B 24 NE2 97.7 96.0 100.8 REMARK 620 5 HOH B 407 O 80.8 95.2 74.7 168.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 10 OD1 REMARK 620 2 ASP B 10 OD2 57.3 REMARK 620 3 TYR B 12 O 83.3 113.9 REMARK 620 4 ASN B 14 OD1 151.8 150.9 80.7 REMARK 620 5 ASP B 19 OD2 111.5 62.6 93.6 92.6 REMARK 620 6 HOH B 419 O 106.3 70.9 170.2 91.3 81.0 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7MG1 RELATED DB: PDB REMARK 900 RELATED ID: 7MG2 RELATED DB: PDB REMARK 900 RELATED ID: 7MG3 RELATED DB: PDB REMARK 900 RELATED ID: 7MG4 RELATED DB: PDB REMARK 900 RELATED ID: 7MG5 RELATED DB: PDB REMARK 900 RELATED ID: 7MG6 RELATED DB: PDB REMARK 900 RELATED ID: 7MG7 RELATED DB: PDB REMARK 900 RELATED ID: 7MG8 RELATED DB: PDB DBREF 7MG9 A 1 118 UNP P02866 CONA_CANEN 164 281 DBREF 7MG9 A 119 237 UNP P02866 CONA_CANEN 30 148 DBREF 7MG9 B 1 118 UNP P02866 CONA_CANEN 164 281 DBREF 7MG9 B 119 237 UNP P02866 CONA_CANEN 30 148 DBREF 7MG9 C 1 4 PDB 7MG9 7MG9 1 4 DBREF 7MG9 D 1 4 PDB 7MG9 7MG9 1 4 SEQRES 1 A 237 ALA ASP THR ILE VAL ALA VAL GLU LEU ASP THR TYR PRO SEQRES 2 A 237 ASN THR ASP ILE GLY ASP PRO SER TYR PRO HIS ILE GLY SEQRES 3 A 237 ILE ASP ILE LYS SER VAL ARG SER LYS LYS THR ALA LYS SEQRES 4 A 237 TRP ASN MET GLN ASN GLY LYS VAL GLY THR ALA HIS ILE SEQRES 5 A 237 ILE TYR ASN SER VAL ASP LYS ARG LEU SER ALA VAL VAL SEQRES 6 A 237 SER TYR PRO ASN ALA ASP SER ALA THR VAL SER TYR ASP SEQRES 7 A 237 VAL ASP LEU ASP ASN VAL LEU PRO GLU TRP VAL ARG VAL SEQRES 8 A 237 GLY LEU SER ALA SER THR GLY LEU TYR LYS GLU THR ASN SEQRES 9 A 237 THR ILE LEU SER TRP SER PHE THR SER LYS LEU LYS SER SEQRES 10 A 237 ASN SER THR HIS GLU THR ASN ALA LEU HIS PHE MET PHE SEQRES 11 A 237 ASN GLN PHE SER LYS ASP GLN LYS ASP LEU ILE LEU GLN SEQRES 12 A 237 GLY ASP ALA THR THR GLY THR ASP GLY ASN LEU GLU LEU SEQRES 13 A 237 THR ARG VAL SER SER ASN GLY SER PRO GLN GLY SER SER SEQRES 14 A 237 VAL GLY ARG ALA LEU PHE TYR ALA PRO VAL HIS ILE TRP SEQRES 15 A 237 GLU SER SER ALA VAL VAL ALA SER PHE GLU ALA THR PHE SEQRES 16 A 237 THR PHE LEU ILE LYS SER PRO ASP SER HIS PRO ALA ASP SEQRES 17 A 237 GLY ILE ALA PHE PHE ILE SER ASN ILE ASP SER SER ILE SEQRES 18 A 237 PRO SER GLY SER THR GLY ARG LEU LEU GLY LEU PHE PRO SEQRES 19 A 237 ASP ALA ASN SEQRES 1 B 237 ALA ASP THR ILE VAL ALA VAL GLU LEU ASP THR TYR PRO SEQRES 2 B 237 ASN THR ASP ILE GLY ASP PRO SER TYR PRO HIS ILE GLY SEQRES 3 B 237 ILE ASP ILE LYS SER VAL ARG SER LYS LYS THR ALA LYS SEQRES 4 B 237 TRP ASN MET GLN ASN GLY LYS VAL GLY THR ALA HIS ILE SEQRES 5 B 237 ILE TYR ASN SER VAL ASP LYS ARG LEU SER ALA VAL VAL SEQRES 6 B 237 SER TYR PRO ASN ALA ASP SER ALA THR VAL SER TYR ASP SEQRES 7 B 237 VAL ASP LEU ASP ASN VAL LEU PRO GLU TRP VAL ARG VAL SEQRES 8 B 237 GLY LEU SER ALA SER THR GLY LEU TYR LYS GLU THR ASN SEQRES 9 B 237 THR ILE LEU SER TRP SER PHE THR SER LYS LEU LYS SER SEQRES 10 B 237 ASN SER THR HIS GLU THR ASN ALA LEU HIS PHE MET PHE SEQRES 11 B 237 ASN GLN PHE SER LYS ASP GLN LYS ASP LEU ILE LEU GLN SEQRES 12 B 237 GLY ASP ALA THR THR GLY THR ASP GLY ASN LEU GLU LEU SEQRES 13 B 237 THR ARG VAL SER SER ASN GLY SER PRO GLN GLY SER SER SEQRES 14 B 237 VAL GLY ARG ALA LEU PHE TYR ALA PRO VAL HIS ILE TRP SEQRES 15 B 237 GLU SER SER ALA VAL VAL ALA SER PHE GLU ALA THR PHE SEQRES 16 B 237 THR PHE LEU ILE LYS SER PRO ASP SER HIS PRO ALA ASP SEQRES 17 B 237 GLY ILE ALA PHE PHE ILE SER ASN ILE ASP SER SER ILE SEQRES 18 B 237 PRO SER GLY SER THR GLY ARG LEU LEU GLY LEU PHE PRO SEQRES 19 B 237 ASP ALA ASN SEQRES 1 C 4 DA DA DA DA SEQRES 1 D 4 DT DT DT DT HET MN A 301 1 HET CA A 302 1 HET MAN A 303 11 HET MN B 301 1 HET CA B 302 1 HET MAN B 303 11 HET SQ0 C 101 21 HET SQ0 D 101 21 HETNAM MN MANGANESE (II) ION HETNAM CA CALCIUM ION HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM SQ0 3-{[2-(2-HYDROXYETHOXY)ETHYL]AMINO}-4-[(6- HETNAM 2 SQ0 HYDROXYHEXYL)AMINO]CYCLOBUT-3-ENE-1,2-DIONE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 5 MN 2(MN 2+) FORMUL 6 CA 2(CA 2+) FORMUL 7 MAN 2(C6 H12 O6) FORMUL 11 SQ0 2(C14 H24 N2 O5) FORMUL 13 HOH *150(H2 O) HELIX 1 AA1 ASN A 14 GLY A 18 5 5 HELIX 2 AA2 THR A 226 LEU A 230 5 5 HELIX 3 AA3 ASN B 14 GLY B 18 5 5 HELIX 4 AA4 ASP B 80 LEU B 85 1 6 HELIX 5 AA5 THR B 226 LEU B 230 5 5 SHEET 1 AA1 7 LYS A 36 LYS A 39 0 SHEET 2 AA1 7 HIS A 24 ILE A 29 -1 N ILE A 27 O LYS A 36 SHEET 3 AA1 7 ILE A 4 ASP A 10 -1 N ALA A 6 O ASP A 28 SHEET 4 AA1 7 GLY A 209 SER A 215 -1 O ILE A 210 N LEU A 9 SHEET 5 AA1 7 TRP A 88 SER A 96 -1 N GLY A 92 O PHE A 213 SHEET 6 AA1 7 VAL A 170 PHE A 175 -1 O PHE A 175 N VAL A 91 SHEET 7 AA1 7 LEU A 140 GLY A 144 -1 N ILE A 141 O LEU A 174 SHEET 1 AA2 6 LYS A 36 LYS A 39 0 SHEET 2 AA2 6 HIS A 24 ILE A 29 -1 N ILE A 27 O LYS A 36 SHEET 3 AA2 6 ILE A 4 ASP A 10 -1 N ALA A 6 O ASP A 28 SHEET 4 AA2 6 GLY A 209 SER A 215 -1 O ILE A 210 N LEU A 9 SHEET 5 AA2 6 TRP A 88 SER A 96 -1 N GLY A 92 O PHE A 213 SHEET 6 AA2 6 VAL A 179 HIS A 180 -1 O VAL A 179 N VAL A 89 SHEET 1 AA312 ALA A 73 ASP A 78 0 SHEET 2 AA312 ARG A 60 SER A 66 -1 N LEU A 61 O TYR A 77 SHEET 3 AA312 VAL A 47 ASN A 55 -1 N THR A 49 O SER A 66 SHEET 4 AA312 ALA A 189 LYS A 200 -1 O PHE A 195 N ALA A 50 SHEET 5 AA312 THR A 103 LEU A 115 -1 N SER A 110 O THR A 194 SHEET 6 AA312 ASN A 124 PHE A 130 -1 O PHE A 130 N TRP A 109 SHEET 7 AA312 ASN B 124 PHE B 130 -1 O HIS B 127 N HIS A 127 SHEET 8 AA312 THR B 103 LYS B 116 -1 N TRP B 109 O PHE B 130 SHEET 9 AA312 VAL B 188 LYS B 200 -1 O VAL B 188 N LYS B 116 SHEET 10 AA312 VAL B 47 ASN B 55 -1 N ALA B 50 O PHE B 195 SHEET 11 AA312 ARG B 60 SER B 66 -1 O SER B 66 N THR B 49 SHEET 12 AA312 ALA B 73 ASP B 78 -1 O TYR B 77 N LEU B 61 SHEET 1 AA4 8 THR A 147 THR A 148 0 SHEET 2 AA4 8 LEU A 154 GLU A 155 -1 O GLU A 155 N THR A 147 SHEET 3 AA4 8 THR A 103 LEU A 115 -1 N ILE A 106 O LEU A 154 SHEET 4 AA4 8 ASN A 124 PHE A 130 -1 O PHE A 130 N TRP A 109 SHEET 5 AA4 8 ASN B 124 PHE B 130 -1 O HIS B 127 N HIS A 127 SHEET 6 AA4 8 THR B 103 LYS B 116 -1 N TRP B 109 O PHE B 130 SHEET 7 AA4 8 LEU B 154 GLU B 155 -1 O LEU B 154 N ILE B 106 SHEET 8 AA4 8 THR B 147 THR B 148 -1 N THR B 147 O GLU B 155 SHEET 1 AA5 7 LYS B 36 LYS B 39 0 SHEET 2 AA5 7 HIS B 24 ILE B 29 -1 N ILE B 27 O LYS B 36 SHEET 3 AA5 7 ILE B 4 ASP B 10 -1 N ALA B 6 O ASP B 28 SHEET 4 AA5 7 GLY B 209 SER B 215 -1 O ILE B 210 N LEU B 9 SHEET 5 AA5 7 TRP B 88 SER B 96 -1 N GLY B 92 O PHE B 213 SHEET 6 AA5 7 VAL B 170 PHE B 175 -1 O PHE B 175 N VAL B 91 SHEET 7 AA5 7 LEU B 140 GLY B 144 -1 N ILE B 141 O LEU B 174 SHEET 1 AA6 6 LYS B 36 LYS B 39 0 SHEET 2 AA6 6 HIS B 24 ILE B 29 -1 N ILE B 27 O LYS B 36 SHEET 3 AA6 6 ILE B 4 ASP B 10 -1 N ALA B 6 O ASP B 28 SHEET 4 AA6 6 GLY B 209 SER B 215 -1 O ILE B 210 N LEU B 9 SHEET 5 AA6 6 TRP B 88 SER B 96 -1 N GLY B 92 O PHE B 213 SHEET 6 AA6 6 VAL B 179 HIS B 180 -1 O VAL B 179 N VAL B 89 LINK C1 MAN A 303 O6 SQ0 C 101 1555 1555 1.40 LINK C1 MAN B 303 O6 SQ0 D 101 1555 1555 1.41 LINK P DA C 1 O4 SQ0 C 101 1555 1555 1.61 LINK P DT D 1 O4 SQ0 D 101 1555 1555 1.63 LINK OE2 GLU A 8 MN MN A 301 1555 1555 1.93 LINK OD2 ASP A 10 MN MN A 301 1555 1555 1.98 LINK OD1 ASP A 10 CA CA A 302 1555 1555 2.31 LINK OD2 ASP A 10 CA CA A 302 1555 1555 2.36 LINK O TYR A 12 CA CA A 302 1555 1555 2.32 LINK OD1 ASN A 14 CA CA A 302 1555 1555 2.31 LINK OD1 ASP A 19 MN MN A 301 1555 1555 2.00 LINK OD2 ASP A 19 CA CA A 302 1555 1555 2.31 LINK NE2 HIS A 24 MN MN A 301 1555 1555 2.13 LINK OE2 GLU B 8 MN MN B 301 1555 1555 1.92 LINK OD2 ASP B 10 MN MN B 301 1555 1555 1.99 LINK OD1 ASP B 10 CA CA B 302 1555 1555 2.31 LINK OD2 ASP B 10 CA CA B 302 1555 1555 2.38 LINK O TYR B 12 CA CA B 302 1555 1555 2.32 LINK OD1 ASN B 14 CA CA B 302 1555 1555 2.33 LINK OD1 ASP B 19 MN MN B 301 1555 1555 2.00 LINK OD2 ASP B 19 CA CA B 302 1555 1555 2.34 LINK NE2 HIS B 24 MN MN B 301 1555 1555 2.07 LINK MN MN B 301 O HOH B 407 1555 1555 2.59 LINK CA CA B 302 O HOH B 419 1555 1555 2.36 CISPEP 1 ALA A 207 ASP A 208 0 3.83 CISPEP 2 ALA B 207 ASP B 208 0 4.21 CRYST1 65.979 70.180 124.420 90.00 90.00 90.00 P 21 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015156 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014249 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008037 0.00000