HEADER OXIDOREDUCTASE 20-APR-21 7MJC TITLE CRYSTAL STRUCTURE ANALYSIS OF ALDH1B1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALDEHYDE DEHYDROGENASE X, MITOCHONDRIAL; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ALDEHYDE DEHYDROGENASE 5,ALDEHYDE DEHYDROGENASE FAMILY 1 COMPND 5 MEMBER B1; COMPND 6 EC: 1.2.1.3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ALDH1B1, ALDH5, ALDHX; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MITOCHONDRIAL METABOLISM, PANCREAS CANCER, COLORECTAL CANCER, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR D.FERNANDEZ,J.K.CHEN REVDAT 2 18-OCT-23 7MJC 1 REMARK REVDAT 1 08-JUN-22 7MJC 0 JRNL AUTH D.FERNANDEZ JRNL TITL INHIBITORS TARGETED TO ALDEHYDE DEHYDROGENASE JRNL REF NAT.CHEM.BIOL. 2022 JRNL REFN ESSN 1552-4469 REMARK 2 REMARK 2 RESOLUTION. 2.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 28975 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1550 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.68 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2179 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.3380 REMARK 3 BIN FREE R VALUE SET COUNT : 93 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7704 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 90 REMARK 3 SOLVENT ATOMS : 58 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.77000 REMARK 3 B22 (A**2) : 1.77000 REMARK 3 B33 (A**2) : -5.73000 REMARK 3 B12 (A**2) : 0.88000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.364 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.335 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.203 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7974 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 7540 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10814 ; 1.351 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 17350 ; 0.922 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 984 ; 6.542 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 372 ;34.917 ;24.301 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1322 ;17.154 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 50 ;17.789 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1174 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9088 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1852 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7MJC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-APR-21. REMARK 100 THE DEPOSITION ID IS D_1000256368. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN-COOLED DOUBLE REMARK 200 CRYSTAL, NON FIXED EXIT SLIT REMARK 200 OPTICS : RH COATED COLLIMATING MIRRORS, K REMARK 200 -B FOCUSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30654 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.670 REMARK 200 RESOLUTION RANGE LOW (A) : 93.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.12400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.85300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.1 REMARK 200 STARTING MODEL: 3N80 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, GLYCEROL, TRIS-BICINE, REMARK 280 ALCOHOLS, PH 8.5, VAPOR DIFFUSION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 124.46133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.23067 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.23067 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 124.46133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 711 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 ALA B 5 REMARK 465 ALA B 6 REMARK 465 ALA B 7 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 20 34.18 -150.04 REMARK 500 ASP A 55 -158.06 -141.40 REMARK 500 ASP A 98 40.94 -96.08 REMARK 500 LEU A 120 -67.12 -96.93 REMARK 500 THR A 227 -73.98 -95.73 REMARK 500 SER A 260 -102.94 -111.71 REMARK 500 LEU A 269 -167.99 -114.73 REMARK 500 LYS A 469 -137.31 51.56 REMARK 500 LEU A 477 167.16 66.64 REMARK 500 ASN B 20 28.98 -148.23 REMARK 500 MET B 79 148.10 -36.58 REMARK 500 GLU B 116 -71.28 -62.16 REMARK 500 LEU B 120 -60.15 -92.69 REMARK 500 THR B 227 -76.00 -99.97 REMARK 500 SER B 260 -91.13 -97.71 REMARK 500 LEU B 269 -158.34 -114.09 REMARK 500 ASP B 280 1.68 -66.87 REMARK 500 GLN B 300 55.35 -101.15 REMARK 500 ASP B 338 -14.47 104.37 REMARK 500 LYS B 411 -64.65 -101.63 REMARK 500 ASN B 422 77.55 -68.65 REMARK 500 THR B 455 -179.82 -171.16 REMARK 500 LYS B 469 -137.05 52.28 REMARK 500 LEU B 477 166.01 71.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 729 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH B 728 DISTANCE = 7.91 ANGSTROMS REMARK 525 HOH B 729 DISTANCE = 9.01 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 602 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 39 OG1 REMARK 620 2 VAL A 40 O 97.7 REMARK 620 3 ASP A 109 O 135.8 95.7 REMARK 620 4 ASP A 109 OD1 59.3 110.4 76.6 REMARK 620 5 GLN A 196 O 72.6 153.9 108.2 85.9 REMARK 620 6 HOH A 704 O 115.8 75.0 108.3 172.6 87.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 602 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 39 OG1 REMARK 620 2 VAL B 40 O 82.5 REMARK 620 3 ASP B 109 O 117.5 82.5 REMARK 620 4 ASP B 109 OD1 54.6 79.7 63.1 REMARK 620 N 1 2 3 DBREF 7MJC A 3 500 UNP P30837 AL1B1_HUMAN 20 517 DBREF 7MJC B 3 500 UNP P30837 AL1B1_HUMAN 20 517 SEQADV 7MJC ARG A 90 UNP P30837 LEU 107 VARIANT SEQADV 7MJC MET A 236 UNP P30837 VAL 253 VARIANT SEQADV 7MJC ARG B 90 UNP P30837 LEU 107 VARIANT SEQADV 7MJC MET B 236 UNP P30837 VAL 253 VARIANT SEQRES 1 A 498 SER SER ALA ALA ALA LEU PRO SER PRO ILE LEU ASN PRO SEQRES 2 A 498 ASP ILE PRO TYR ASN GLN LEU PHE ILE ASN ASN GLU TRP SEQRES 3 A 498 GLN ASP ALA VAL SER LYS LYS THR PHE PRO THR VAL ASN SEQRES 4 A 498 PRO THR THR GLY GLU VAL ILE GLY HIS VAL ALA GLU GLY SEQRES 5 A 498 ASP ARG ALA ASP VAL ASP ARG ALA VAL LYS ALA ALA ARG SEQRES 6 A 498 GLU ALA PHE ARG LEU GLY SER PRO TRP ARG ARG MET ASP SEQRES 7 A 498 ALA SER GLU ARG GLY ARG LEU LEU ASN ARG LEU ALA ASP SEQRES 8 A 498 LEU VAL GLU ARG ASP ARG VAL TYR LEU ALA SER LEU GLU SEQRES 9 A 498 THR LEU ASP ASN GLY LYS PRO PHE GLN GLU SER TYR ALA SEQRES 10 A 498 LEU ASP LEU ASP GLU VAL ILE LYS VAL TYR ARG TYR PHE SEQRES 11 A 498 ALA GLY TRP ALA ASP LYS TRP HIS GLY LYS THR ILE PRO SEQRES 12 A 498 MET ASP GLY GLN HIS PHE CYS PHE THR ARG HIS GLU PRO SEQRES 13 A 498 VAL GLY VAL CYS GLY GLN ILE ILE PRO TRP ASN PHE PRO SEQRES 14 A 498 LEU VAL MET GLN GLY TRP LYS LEU ALA PRO ALA LEU ALA SEQRES 15 A 498 THR GLY ASN THR VAL VAL MET LYS VAL ALA GLU GLN THR SEQRES 16 A 498 PRO LEU SER ALA LEU TYR LEU ALA SER LEU ILE LYS GLU SEQRES 17 A 498 ALA GLY PHE PRO PRO GLY VAL VAL ASN ILE ILE THR GLY SEQRES 18 A 498 TYR GLY PRO THR ALA GLY ALA ALA ILE ALA GLN HIS MET SEQRES 19 A 498 ASP VAL ASP LYS VAL ALA PHE THR GLY SER THR GLU VAL SEQRES 20 A 498 GLY HIS LEU ILE GLN LYS ALA ALA GLY ASP SER ASN LEU SEQRES 21 A 498 LYS ARG VAL THR LEU GLU LEU GLY GLY LYS SER PRO SER SEQRES 22 A 498 ILE VAL LEU ALA ASP ALA ASP MET GLU HIS ALA VAL GLU SEQRES 23 A 498 GLN CYS HIS GLU ALA LEU PHE PHE ASN MET GLY GLN CYS SEQRES 24 A 498 CYS CYS ALA GLY SER ARG THR PHE VAL GLU GLU SER ILE SEQRES 25 A 498 TYR ASN GLU PHE LEU GLU ARG THR VAL GLU LYS ALA LYS SEQRES 26 A 498 GLN ARG LYS VAL GLY ASN PRO PHE GLU LEU ASP THR GLN SEQRES 27 A 498 GLN GLY PRO GLN VAL ASP LYS GLU GLN PHE GLU ARG VAL SEQRES 28 A 498 LEU GLY TYR ILE GLN LEU GLY GLN LYS GLU GLY ALA LYS SEQRES 29 A 498 LEU LEU CYS GLY GLY GLU ARG PHE GLY GLU ARG GLY PHE SEQRES 30 A 498 PHE ILE LYS PRO THR VAL PHE GLY GLY VAL GLN ASP ASP SEQRES 31 A 498 MET ARG ILE ALA LYS GLU GLU ILE PHE GLY PRO VAL GLN SEQRES 32 A 498 PRO LEU PHE LYS PHE LYS LYS ILE GLU GLU VAL VAL GLU SEQRES 33 A 498 ARG ALA ASN ASN THR ARG TYR GLY LEU ALA ALA ALA VAL SEQRES 34 A 498 PHE THR ARG ASP LEU ASP LYS ALA MET TYR PHE THR GLN SEQRES 35 A 498 ALA LEU GLN ALA GLY THR VAL TRP VAL ASN THR TYR ASN SEQRES 36 A 498 ILE VAL THR CYS HIS THR PRO PHE GLY GLY PHE LYS GLU SEQRES 37 A 498 SER GLY ASN GLY ARG GLU LEU GLY GLU ASP GLY LEU LYS SEQRES 38 A 498 ALA TYR THR GLU VAL LYS THR VAL THR ILE LYS VAL PRO SEQRES 39 A 498 GLN LYS ASN SER SEQRES 1 B 498 SER SER ALA ALA ALA LEU PRO SER PRO ILE LEU ASN PRO SEQRES 2 B 498 ASP ILE PRO TYR ASN GLN LEU PHE ILE ASN ASN GLU TRP SEQRES 3 B 498 GLN ASP ALA VAL SER LYS LYS THR PHE PRO THR VAL ASN SEQRES 4 B 498 PRO THR THR GLY GLU VAL ILE GLY HIS VAL ALA GLU GLY SEQRES 5 B 498 ASP ARG ALA ASP VAL ASP ARG ALA VAL LYS ALA ALA ARG SEQRES 6 B 498 GLU ALA PHE ARG LEU GLY SER PRO TRP ARG ARG MET ASP SEQRES 7 B 498 ALA SER GLU ARG GLY ARG LEU LEU ASN ARG LEU ALA ASP SEQRES 8 B 498 LEU VAL GLU ARG ASP ARG VAL TYR LEU ALA SER LEU GLU SEQRES 9 B 498 THR LEU ASP ASN GLY LYS PRO PHE GLN GLU SER TYR ALA SEQRES 10 B 498 LEU ASP LEU ASP GLU VAL ILE LYS VAL TYR ARG TYR PHE SEQRES 11 B 498 ALA GLY TRP ALA ASP LYS TRP HIS GLY LYS THR ILE PRO SEQRES 12 B 498 MET ASP GLY GLN HIS PHE CYS PHE THR ARG HIS GLU PRO SEQRES 13 B 498 VAL GLY VAL CYS GLY GLN ILE ILE PRO TRP ASN PHE PRO SEQRES 14 B 498 LEU VAL MET GLN GLY TRP LYS LEU ALA PRO ALA LEU ALA SEQRES 15 B 498 THR GLY ASN THR VAL VAL MET LYS VAL ALA GLU GLN THR SEQRES 16 B 498 PRO LEU SER ALA LEU TYR LEU ALA SER LEU ILE LYS GLU SEQRES 17 B 498 ALA GLY PHE PRO PRO GLY VAL VAL ASN ILE ILE THR GLY SEQRES 18 B 498 TYR GLY PRO THR ALA GLY ALA ALA ILE ALA GLN HIS MET SEQRES 19 B 498 ASP VAL ASP LYS VAL ALA PHE THR GLY SER THR GLU VAL SEQRES 20 B 498 GLY HIS LEU ILE GLN LYS ALA ALA GLY ASP SER ASN LEU SEQRES 21 B 498 LYS ARG VAL THR LEU GLU LEU GLY GLY LYS SER PRO SER SEQRES 22 B 498 ILE VAL LEU ALA ASP ALA ASP MET GLU HIS ALA VAL GLU SEQRES 23 B 498 GLN CYS HIS GLU ALA LEU PHE PHE ASN MET GLY GLN CYS SEQRES 24 B 498 CYS CYS ALA GLY SER ARG THR PHE VAL GLU GLU SER ILE SEQRES 25 B 498 TYR ASN GLU PHE LEU GLU ARG THR VAL GLU LYS ALA LYS SEQRES 26 B 498 GLN ARG LYS VAL GLY ASN PRO PHE GLU LEU ASP THR GLN SEQRES 27 B 498 GLN GLY PRO GLN VAL ASP LYS GLU GLN PHE GLU ARG VAL SEQRES 28 B 498 LEU GLY TYR ILE GLN LEU GLY GLN LYS GLU GLY ALA LYS SEQRES 29 B 498 LEU LEU CYS GLY GLY GLU ARG PHE GLY GLU ARG GLY PHE SEQRES 30 B 498 PHE ILE LYS PRO THR VAL PHE GLY GLY VAL GLN ASP ASP SEQRES 31 B 498 MET ARG ILE ALA LYS GLU GLU ILE PHE GLY PRO VAL GLN SEQRES 32 B 498 PRO LEU PHE LYS PHE LYS LYS ILE GLU GLU VAL VAL GLU SEQRES 33 B 498 ARG ALA ASN ASN THR ARG TYR GLY LEU ALA ALA ALA VAL SEQRES 34 B 498 PHE THR ARG ASP LEU ASP LYS ALA MET TYR PHE THR GLN SEQRES 35 B 498 ALA LEU GLN ALA GLY THR VAL TRP VAL ASN THR TYR ASN SEQRES 36 B 498 ILE VAL THR CYS HIS THR PRO PHE GLY GLY PHE LYS GLU SEQRES 37 B 498 SER GLY ASN GLY ARG GLU LEU GLY GLU ASP GLY LEU LYS SEQRES 38 B 498 ALA TYR THR GLU VAL LYS THR VAL THR ILE LYS VAL PRO SEQRES 39 B 498 GLN LYS ASN SER HET NAD A 601 44 HET NA A 602 1 HET NAD B 601 44 HET NA B 602 1 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM NA SODIUM ION FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 NA 2(NA 1+) FORMUL 7 HOH *58(H2 O) HELIX 1 AA1 ASP A 55 ARG A 71 1 17 HELIX 2 AA2 SER A 74 MET A 79 1 6 HELIX 3 AA3 ASP A 80 ASP A 98 1 19 HELIX 4 AA4 ASP A 98 GLY A 111 1 14 HELIX 5 AA5 PRO A 113 LEU A 120 1 8 HELIX 6 AA6 LEU A 120 ALA A 136 1 17 HELIX 7 AA7 PHE A 170 THR A 185 1 16 HELIX 8 AA8 PRO A 198 GLY A 212 1 15 HELIX 9 AA9 THR A 227 HIS A 235 1 9 HELIX 10 AB1 SER A 246 ASP A 259 1 14 HELIX 11 AB2 ASP A 282 PHE A 296 1 15 HELIX 12 AB3 ASN A 297 GLN A 300 5 4 HELIX 13 AB4 ILE A 314 ARG A 329 1 16 HELIX 14 AB5 ASP A 346 GLU A 363 1 18 HELIX 15 AB6 MET A 393 GLU A 398 1 6 HELIX 16 AB7 LYS A 412 ASN A 422 1 11 HELIX 17 AB8 ASP A 435 LEU A 446 1 12 HELIX 18 AB9 PHE A 468 GLU A 470 5 3 HELIX 19 AC1 GLU A 479 ALA A 484 5 6 HELIX 20 AC2 ASP B 55 PHE B 70 1 16 HELIX 21 AC3 SER B 74 MET B 79 1 6 HELIX 22 AC4 ASP B 80 ASP B 98 1 19 HELIX 23 AC5 ASP B 98 GLY B 111 1 14 HELIX 24 AC6 PRO B 113 LEU B 120 1 8 HELIX 25 AC7 LEU B 120 ALA B 136 1 17 HELIX 26 AC8 PHE B 170 THR B 185 1 16 HELIX 27 AC9 PRO B 198 GLY B 212 1 15 HELIX 28 AD1 THR B 227 HIS B 235 1 9 HELIX 29 AD2 SER B 246 SER B 260 1 15 HELIX 30 AD3 ASP B 282 PHE B 296 1 15 HELIX 31 AD4 ASN B 297 GLN B 300 5 4 HELIX 32 AD5 ILE B 314 ARG B 329 1 16 HELIX 33 AD6 ASP B 346 GLY B 364 1 19 HELIX 34 AD7 MET B 393 GLU B 398 1 6 HELIX 35 AD8 LYS B 412 ASN B 422 1 11 HELIX 36 AD9 ASP B 435 LEU B 446 1 12 HELIX 37 AE1 PHE B 468 GLU B 470 5 3 HELIX 38 AE2 GLU B 479 ALA B 484 5 6 SHEET 1 AA1 2 LEU A 22 ILE A 24 0 SHEET 2 AA1 2 GLU A 27 GLN A 29 -1 O GLN A 29 N LEU A 22 SHEET 1 AA2 2 THR A 36 VAL A 40 0 SHEET 2 AA2 2 VAL A 47 ALA A 52 -1 O VAL A 51 N PHE A 37 SHEET 1 AA310 THR A 143 ILE A 144 0 SHEET 2 AA310 HIS A 150 PRO A 158 -1 O CYS A 152 N ILE A 144 SHEET 3 AA310 THR A 486 LYS A 494 -1 O VAL A 491 N PHE A 153 SHEET 4 AA310 THR B 450 VAL B 453 1 O VAL B 451 N THR A 490 SHEET 5 AA310 ALA B 428 PHE B 432 1 N ALA B 429 O TRP B 452 SHEET 6 AA310 PRO B 274 VAL B 277 1 N ILE B 276 O PHE B 432 SHEET 7 AA310 ARG B 307 GLU B 311 1 O PHE B 309 N SER B 275 SHEET 8 AA310 VAL B 404 PHE B 410 1 O PHE B 408 N THR B 308 SHEET 9 AA310 THR B 384 GLY B 387 1 N PHE B 386 O GLN B 405 SHEET 10 AA310 LYS B 366 CYS B 369 -1 N LEU B 368 O VAL B 385 SHEET 1 AA4 6 VAL A 218 THR A 222 0 SHEET 2 AA4 6 THR A 188 VAL A 193 1 N MET A 191 O ASN A 219 SHEET 3 AA4 6 VAL A 161 ILE A 165 1 N GLN A 164 O LYS A 192 SHEET 4 AA4 6 LYS A 240 THR A 244 1 O LYS A 240 N GLY A 163 SHEET 5 AA4 6 ARG A 264 GLU A 268 1 O ARG A 264 N VAL A 241 SHEET 6 AA4 6 GLY A 472 ASN A 473 -1 O ASN A 473 N LEU A 267 SHEET 1 AA510 LYS A 366 CYS A 369 0 SHEET 2 AA510 THR A 384 GLY A 387 -1 O GLY A 387 N LYS A 366 SHEET 3 AA510 VAL A 404 PHE A 410 1 O LEU A 407 N PHE A 386 SHEET 4 AA510 GLY A 305 GLU A 311 1 N THR A 308 O PHE A 408 SHEET 5 AA510 SER A 273 VAL A 277 1 N SER A 275 O PHE A 309 SHEET 6 AA510 ALA A 428 PHE A 432 1 O PHE A 432 N ILE A 276 SHEET 7 AA510 THR A 450 VAL A 453 1 O TRP A 452 N ALA A 429 SHEET 8 AA510 THR B 486 LYS B 494 1 O THR B 490 N VAL A 451 SHEET 9 AA510 HIS B 150 PRO B 158 -1 N PHE B 153 O VAL B 491 SHEET 10 AA510 THR B 143 ILE B 144 -1 N ILE B 144 O CYS B 152 SHEET 1 AA6 2 LEU B 22 ILE B 24 0 SHEET 2 AA6 2 GLU B 27 GLN B 29 -1 O GLU B 27 N ILE B 24 SHEET 1 AA7 2 THR B 36 VAL B 40 0 SHEET 2 AA7 2 VAL B 47 ALA B 52 -1 O ILE B 48 N THR B 39 SHEET 1 AA8 6 VAL B 218 ILE B 221 0 SHEET 2 AA8 6 THR B 188 LYS B 192 1 N MET B 191 O ASN B 219 SHEET 3 AA8 6 VAL B 161 ILE B 165 1 N CYS B 162 O THR B 188 SHEET 4 AA8 6 LYS B 240 THR B 244 1 O LYS B 240 N GLY B 163 SHEET 5 AA8 6 ARG B 264 GLU B 268 1 O ARG B 264 N VAL B 241 SHEET 6 AA8 6 GLY B 472 ASN B 473 -1 O ASN B 473 N LEU B 267 LINK OG1 THR A 39 NA NA A 602 1555 1555 2.92 LINK O VAL A 40 NA NA A 602 1555 1555 2.61 LINK O ASP A 109 NA NA A 602 1555 1555 2.57 LINK OD1 ASP A 109 NA NA A 602 1555 1555 2.42 LINK O GLN A 196 NA NA A 602 1555 1555 2.42 LINK NA NA A 602 O HOH A 704 1555 1555 2.23 LINK OG1 THR B 39 NA NA B 602 1555 1555 2.91 LINK O VAL B 40 NA NA B 602 1555 1555 2.81 LINK O ASP B 109 NA NA B 602 1555 1555 2.80 LINK OD1 ASP B 109 NA NA B 602 1555 1555 2.72 CRYST1 101.350 101.350 186.692 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009867 0.005697 0.000000 0.00000 SCALE2 0.000000 0.011393 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005356 0.00000