HEADER VIRAL PROTEIN/INHIBITOR 27-APR-21 7ML8 TITLE THE CRYSTAL STRUCTURE OF I38T MUTANT PA ENDONUCLEASE TITLE 2 (2009/H1N1/CALIFORNIA) IN COMPLEX WITH SJ001023038 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMERASE ACIDIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RNA-DIRECTED RNA POLYMERASE SUBUNIT P2,RNA-DIRECTED RNA COMPND 5 POLYMERASE SUBUNIT P2; COMPND 6 EC: 3.1.-.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (STRAIN SWL SOURCE 3 A/CALIFORNIA/04/2009 H1N1); SOURCE 4 ORGANISM_TAXID: 641501; SOURCE 5 STRAIN: SWL A/CALIFORNIA/04/2009 H1N1; SOURCE 6 GENE: PA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS NUCLEASE, INFLUENZA, INHIBITOR RESISTANCE, VIRAL PROTEIN, VIRAL KEYWDS 2 PROTEIN-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.G.CUYPERS,P.J.SLAVISH,M.K.YUN,R.DUBOIS,Z.RANKOVIC,S.W.WHITE REVDAT 3 18-OCT-23 7ML8 1 REMARK REVDAT 2 11-OCT-23 7ML8 1 JRNL REVDAT 1 27-OCT-21 7ML8 0 JRNL AUTH M.G.CUYPERS,P.J.SLAVISH,M.K.YUN,R.DUBOIS,Z.RANKOVIC, JRNL AUTH 2 S.W.WHITE JRNL TITL THE CRYSTAL STRUCTURE OF I38T MUTANT PA ENDONUCLEASE JRNL TITL 2 (2009/H1N1/CALIFORNIA) IN COMPLEX WITH ST JUDE COMPOUND JRNL TITL 3 AC067-19 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.J.SLAVISH,M.G.CUYPERS,M.A.RIMMER,A.ABDOLVAHABI,T.JEEVAN, REMARK 1 AUTH 2 G.KUMAR,J.A.JARUSIEWICZ,S.VAITHIYALINGAM,J.C.JONES, REMARK 1 AUTH 3 J.J.BOWLING,J.E.PRICE,R.M.DUBOIS,J.MIN,R.J.WEBBY,Z.RANKOVIC, REMARK 1 AUTH 4 S.W.WHITE REMARK 1 TITL CHEMICAL SCAFFOLD RECYCLING: STRUCTURE-GUIDED CONVERSION OF REMARK 1 TITL 2 AN HIV INTEGRASE INHIBITOR INTO A POTENT INFLUENZA VIRUS REMARK 1 TITL 3 RNA-DEPENDENT RNA POLYMERASE INHIBITOR DESIGNED TO MINIMIZE REMARK 1 TITL 4 RESISTANCE POTENTIAL. REMARK 1 REF EUR.J.MED.CHEM. V. 247 15035 2023 REMARK 1 REFN ISSN 0223-5234 REMARK 1 PMID 36603507 REMARK 1 DOI 10.1016/J.EJMECH.2022.115035 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 7734 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 384 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 74.4600 - 3.9000 0.97 2515 125 0.1871 0.2235 REMARK 3 2 3.8900 - 3.0900 1.00 2456 108 0.2751 0.3173 REMARK 3 3 3.0900 - 2.7000 1.00 2379 151 0.3677 0.4485 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.598 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.832 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 65.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 89.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1540 REMARK 3 ANGLE : 0.405 2080 REMARK 3 CHIRALITY : 0.037 218 REMARK 3 PLANARITY : 0.003 261 REMARK 3 DIHEDRAL : 9.051 221 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -3 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.4111 19.4642 3.8597 REMARK 3 T TENSOR REMARK 3 T11: 0.9131 T22: 0.6770 REMARK 3 T33: 0.7751 T12: -0.0640 REMARK 3 T13: 0.4232 T23: -0.0698 REMARK 3 L TENSOR REMARK 3 L11: 2.3547 L22: 7.2848 REMARK 3 L33: 6.7592 L12: -2.7823 REMARK 3 L13: 0.6016 L23: 2.0729 REMARK 3 S TENSOR REMARK 3 S11: -0.2597 S12: 0.4945 S13: -0.5409 REMARK 3 S21: 0.0312 S22: -0.1944 S23: 0.2989 REMARK 3 S31: 0.4912 S32: 0.1270 S33: 0.3596 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.3905 21.6449 20.1870 REMARK 3 T TENSOR REMARK 3 T11: 1.0004 T22: 0.8116 REMARK 3 T33: 0.7663 T12: -0.0079 REMARK 3 T13: 0.3282 T23: 0.3407 REMARK 3 L TENSOR REMARK 3 L11: 2.2689 L22: 2.1470 REMARK 3 L33: 4.6307 L12: -0.8147 REMARK 3 L13: 1.9710 L23: -0.6788 REMARK 3 S TENSOR REMARK 3 S11: -0.4430 S12: -0.5314 S13: -0.4270 REMARK 3 S21: 0.8809 S22: -0.2469 S23: -0.0665 REMARK 3 S31: 0.4524 S32: 0.6636 S33: 0.5948 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.3124 10.4574 27.1005 REMARK 3 T TENSOR REMARK 3 T11: 2.1825 T22: 1.0554 REMARK 3 T33: 1.1216 T12: -0.4173 REMARK 3 T13: 0.5315 T23: 0.3777 REMARK 3 L TENSOR REMARK 3 L11: 0.9296 L22: 3.0090 REMARK 3 L33: 2.3238 L12: -1.5379 REMARK 3 L13: 1.3307 L23: -1.7679 REMARK 3 S TENSOR REMARK 3 S11: 0.0485 S12: -0.3356 S13: -0.3588 REMARK 3 S21: -0.4126 S22: 0.6198 S23: 0.6840 REMARK 3 S31: 0.3301 S32: -0.7406 S33: -0.0964 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 139 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9081 22.3388 22.4233 REMARK 3 T TENSOR REMARK 3 T11: 0.9933 T22: 0.8252 REMARK 3 T33: 0.8304 T12: -0.1356 REMARK 3 T13: 0.5154 T23: 0.0816 REMARK 3 L TENSOR REMARK 3 L11: 2.9019 L22: 2.3094 REMARK 3 L33: 5.4440 L12: -0.0252 REMARK 3 L13: -0.1770 L23: -0.8122 REMARK 3 S TENSOR REMARK 3 S11: -0.3453 S12: -0.6536 S13: -0.7347 REMARK 3 S21: 0.6496 S22: -0.1569 S23: 0.4560 REMARK 3 S31: 0.5803 S32: -0.4180 S33: 0.0871 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 202 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.3211 9.9227 17.9914 REMARK 3 T TENSOR REMARK 3 T11: 1.7156 T22: 0.6932 REMARK 3 T33: 2.0401 T12: -0.0874 REMARK 3 T13: 0.6330 T23: 0.2377 REMARK 3 L TENSOR REMARK 3 L11: 2.1455 L22: 7.0213 REMARK 3 L33: 3.7311 L12: -1.4963 REMARK 3 L13: -2.2872 L23: 4.3752 REMARK 3 S TENSOR REMARK 3 S11: 0.3603 S12: -0.1389 S13: -1.4573 REMARK 3 S21: 0.8080 S22: -0.3393 S23: -0.7746 REMARK 3 S31: 1.6487 S32: -0.0131 S33: 0.2610 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ML8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-APR-21. REMARK 100 THE DEPOSITION ID IS D_1000256481. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7739 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 74.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5VPT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.8, 1 M AMMONIUM REMARK 280 SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 44.82200 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 44.82200 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 66.86450 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 44.82200 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 44.82200 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 66.86450 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 44.82200 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 44.82200 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 66.86450 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 44.82200 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 44.82200 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 66.86450 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 44.82200 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 44.82200 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 66.86450 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 44.82200 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 44.82200 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 66.86450 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 44.82200 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 44.82200 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 66.86450 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 44.82200 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 44.82200 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 66.86450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 60860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -373.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 89.64400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 89.64400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 89.64400 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 89.64400 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 89.64400 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 89.64400 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 89.64400 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 89.64400 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 GLU A 195 REMARK 465 ARG A 196 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A -3 NE CZ NH1 NH2 REMARK 470 GLU A 15 CD OE1 OE2 REMARK 470 LYS A 34 CE NZ REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 ARG A 84 NE CZ NH1 NH2 REMARK 470 GLU A 101 CG CD OE1 OE2 REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 ARG A 125 CZ NH1 NH2 REMARK 470 LEU A 132 CG CD1 CD2 REMARK 470 LYS A 134 CG CD CE NZ REMARK 470 ILE A 138 CG1 CG2 CD1 REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 GLU A 141 CG CD OE1 OE2 REMARK 470 LYS A 142 CG CD CE NZ REMARK 470 GLU A 165 CG CD OE1 OE2 REMARK 470 ARG A 170 NE CZ NH1 NH2 REMARK 470 GLN A 193 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 73 -95.95 54.58 REMARK 500 ARG A 75 -51.05 -127.06 REMARK 500 ILE A 138 -88.51 -67.07 REMARK 500 SER A 140 -94.25 -81.16 REMARK 500 GLU A 141 -103.79 -152.53 REMARK 500 THR A 162 -62.80 62.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GLU A 201 REMARK 610 QQ4 A 203 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 204 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 41 NE2 REMARK 620 2 ASP A 108 OD2 86.8 REMARK 620 3 GLU A 119 OE2 170.1 93.8 REMARK 620 4 ILE A 120 O 79.2 98.4 91.0 REMARK 620 5 ZHJ A 202 O01 87.8 166.8 89.5 68.7 REMARK 620 6 ZHJ A 202 O04 105.5 120.7 82.7 140.6 72.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 205 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 108 OD1 REMARK 620 2 ZHJ A 202 O19 117.9 REMARK 620 3 HOH A 301 O 100.6 84.9 REMARK 620 N 1 2 DBREF 7ML8 A 1 50 UNP C3W5S0 C3W5S0_I09A0 1 50 DBREF 7ML8 A 73 196 UNP C3W5S0 C3W5S0_I09A0 73 196 SEQADV 7ML8 MET A -19 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 GLY A -18 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 SER A -17 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 SER A -16 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 HIS A -15 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 HIS A -14 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 HIS A -13 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 HIS A -12 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 HIS A -11 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 HIS A -10 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 SER A -9 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 SER A -8 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 GLY A -7 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 LEU A -6 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 VAL A -5 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 PRO A -4 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 ARG A -3 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 GLY A -2 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 SER A -1 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 HIS A 0 UNP C3W5S0 EXPRESSION TAG SEQADV 7ML8 THR A 38 UNP C3W5S0 ILE 38 ENGINEERED MUTATION SEQADV 7ML8 GLY A 51 UNP C3W5S0 LINKER SEQADV 7ML8 GLY A 52 UNP C3W5S0 LINKER SEQADV 7ML8 SER A 53 UNP C3W5S0 LINKER SEQRES 1 A 197 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 197 LEU VAL PRO ARG GLY SER HIS MET GLU ASP PHE VAL ARG SEQRES 3 A 197 GLN CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS SEQRES 4 A 197 ALA MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR SEQRES 5 A 197 ASN LYS PHE ALA ALA THR CYS THR HIS LEU GLU VAL CYS SEQRES 6 A 197 PHE MET TYR SER ASP GLY GLY SER LYS HIS ARG PHE GLU SEQRES 7 A 197 ILE ILE GLU GLY ARG ASP ARG ILE MET ALA TRP THR VAL SEQRES 8 A 197 VAL ASN SER ILE CYS ASN THR THR GLY VAL GLU LYS PRO SEQRES 9 A 197 LYS PHE LEU PRO ASP LEU TYR ASP TYR LYS GLU ASN ARG SEQRES 10 A 197 PHE ILE GLU ILE GLY VAL THR ARG ARG GLU VAL HIS ILE SEQRES 11 A 197 TYR TYR LEU GLU LYS ALA ASN LYS ILE LYS SER GLU LYS SEQRES 12 A 197 THR HIS ILE HIS ILE PHE SER PHE THR GLY GLU GLU MET SEQRES 13 A 197 ALA THR LYS ALA ASP TYR THR LEU ASP GLU GLU SER ARG SEQRES 14 A 197 ALA ARG ILE LYS THR ARG LEU PHE THR ILE ARG GLN GLU SEQRES 15 A 197 MET ALA SER ARG SER LEU TRP ASP SER PHE ARG GLN SER SEQRES 16 A 197 GLU ARG HET GLU A 201 9 HET ZHJ A 202 28 HET QQ4 A 203 41 HET MN A 204 1 HET MN A 205 1 HET SO4 A 206 5 HET SO4 A 207 5 HETNAM GLU GLUTAMIC ACID HETNAM ZHJ 5-HYDROXY-N-[2-(4-HYDROXY-3-METHOXYPHENYL)ETHYL]-6-OXO- HETNAM 2 ZHJ 2-PHENYL-1,6-DIHYDROPYRIMIDINE-4-CARBOXAMIDE HETNAM QQ4 HEXA VINYLPYRROLIDONE K15 HETNAM MN MANGANESE (II) ION HETNAM SO4 SULFATE ION HETSYN QQ4 1,1',1'',1''',1'''',1'''''-[(3R,5R,7R,9S,11R)-DODECANE- HETSYN 2 QQ4 1,3,5,7,9,11-HEXAYL]HEXA(PYRROLIDIN-2-ONE) FORMUL 2 GLU C5 H9 N O4 FORMUL 3 ZHJ C20 H19 N3 O5 FORMUL 4 QQ4 C36 H56 N6 O6 FORMUL 5 MN 2(MN 2+) FORMUL 7 SO4 2(O4 S 2-) FORMUL 9 HOH *21(H2 O) HELIX 1 AA1 SER A -1 PHE A 9 1 11 HELIX 2 AA2 ASN A 10 TYR A 24 1 15 HELIX 3 AA3 GLU A 31 GLY A 51 1 21 HELIX 4 AA4 ASP A 83 GLY A 99 1 17 HELIX 5 AA5 GLU A 126 LYS A 139 1 14 HELIX 6 AA6 LYS A 158 ASP A 160 5 3 HELIX 7 AA7 ASP A 164 ARG A 185 1 22 HELIX 8 AA8 LEU A 187 SER A 194 1 8 SHEET 1 AA1 5 PHE A 76 ILE A 78 0 SHEET 2 AA1 5 LEU A 109 ASP A 111 -1 O TYR A 110 N GLU A 77 SHEET 3 AA1 5 ARG A 116 THR A 123 -1 O ARG A 116 N ASP A 111 SHEET 4 AA1 5 HIS A 144 SER A 149 1 O HIS A 144 N PHE A 117 SHEET 5 AA1 5 GLU A 154 ALA A 156 -1 O MET A 155 N ILE A 147 LINK NE2 HIS A 41 MN MN A 204 1555 1555 2.39 LINK OD2 ASP A 108 MN MN A 204 1555 1555 2.02 LINK OD1 ASP A 108 MN MN A 205 1555 1555 1.80 LINK OE2 GLU A 119 MN MN A 204 1555 1555 1.90 LINK O ILE A 120 MN MN A 204 1555 1555 2.01 LINK O01 ZHJ A 202 MN MN A 204 1555 1555 2.80 LINK O04 ZHJ A 202 MN MN A 204 1555 1555 1.73 LINK O19 ZHJ A 202 MN MN A 205 1555 1555 1.74 LINK MN MN A 205 O HOH A 301 1555 1555 2.26 CRYST1 89.644 89.644 133.729 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011155 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011155 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007478 0.00000