data_7MLW # _entry.id 7MLW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7MLW pdb_00007mlw 10.2210/pdb7mlw/pdb WWPDB D_1000256511 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7MLW _pdbx_database_status.recvd_initial_deposition_date 2021-04-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Trachman, R.J.' 1 0000-0001-7459-2457 ;Ferre-D'Amare, A.R. ; 2 0000-0003-4549-1619 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Rna _citation.journal_id_ASTM RNARFU _citation.journal_id_CSD 2122 _citation.journal_id_ISSN 1469-9001 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 27 _citation.language ? _citation.page_first 1257 _citation.page_last 1264 _citation.title 'An uncommon [K + (Mg 2+ ) 2 ] metal ion triad imparts stability and selectivity to the Guanidine-I riboswitch.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1261/rna.078824.121 _citation.pdbx_database_id_PubMed 34257148 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Trachman 3rd, R.J.' 1 ? primary ;Ferre-D'Amare, A.R. ; 2 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7MLW _cell.details ? _cell.formula_units_Z ? _cell.length_a 51.703 _cell.length_a_esd ? _cell.length_b 51.703 _cell.length_b_esd ? _cell.length_c 266.728 _cell.length_c_esd ? _cell.volume 617491.134 _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7MLW _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ;P 32 2" ; _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Guanidine-I riboswitch' 41465.645 1 ? ? ? ? 2 non-polymer nat GUANIDINE 59.070 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 4 ? ? ? ? 4 non-polymer syn 'STRONTIUM ION' 87.620 2 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 3 ? ? ? ? 6 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ? 7 water nat water 18.015 13 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGAUCGCUAGGGUUCCGGUCGUGCGGCGUUCGCGCCGCACGAUGCUGGUCCGAGAGCAAUCCGGUCUUGCCUUCGCCUCG UUCGCGAGGAAACGGCGAGGCUCCACGGAGGGAUAAAAGCCCGGGAGG ; _entity_poly.pdbx_seq_one_letter_code_can ;GGAUCGCUAGGGUUCCGGUCGUGCGGCGUUCGCGCCGCACGAUGCUGGUCCGAGAGCAAUCCGGUCUUGCCUUCGCCUCG UUCGCGAGGAAACGGCGAGGCUCCACGGAGGGAUAAAAGCCCGGGAGG ; _entity_poly.pdbx_strand_id F _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 U n 1 5 C n 1 6 G n 1 7 C n 1 8 U n 1 9 A n 1 10 G n 1 11 G n 1 12 G n 1 13 U n 1 14 U n 1 15 C n 1 16 C n 1 17 G n 1 18 G n 1 19 U n 1 20 C n 1 21 G n 1 22 U n 1 23 G n 1 24 C n 1 25 G n 1 26 G n 1 27 C n 1 28 G n 1 29 U n 1 30 U n 1 31 C n 1 32 G n 1 33 C n 1 34 G n 1 35 C n 1 36 C n 1 37 G n 1 38 C n 1 39 A n 1 40 C n 1 41 G n 1 42 A n 1 43 U n 1 44 G n 1 45 C n 1 46 U n 1 47 G n 1 48 G n 1 49 U n 1 50 C n 1 51 C n 1 52 G n 1 53 A n 1 54 G n 1 55 A n 1 56 G n 1 57 C n 1 58 A n 1 59 A n 1 60 U n 1 61 C n 1 62 C n 1 63 G n 1 64 G n 1 65 U n 1 66 C n 1 67 U n 1 68 U n 1 69 G n 1 70 C n 1 71 C n 1 72 U n 1 73 U n 1 74 C n 1 75 G n 1 76 C n 1 77 C n 1 78 U n 1 79 C n 1 80 G n 1 81 U n 1 82 U n 1 83 C n 1 84 G n 1 85 C n 1 86 G n 1 87 A n 1 88 G n 1 89 G n 1 90 A n 1 91 A n 1 92 A n 1 93 C n 1 94 G n 1 95 G n 1 96 C n 1 97 G n 1 98 A n 1 99 G n 1 100 G n 1 101 C n 1 102 U n 1 103 C n 1 104 C n 1 105 A n 1 106 C n 1 107 G n 1 108 G n 1 109 A n 1 110 G n 1 111 G n 1 112 G n 1 113 A n 1 114 U n 1 115 A n 1 116 A n 1 117 A n 1 118 A n 1 119 G n 1 120 C n 1 121 C n 1 122 C n 1 123 G n 1 124 G n 1 125 G n 1 126 A n 1 127 G n 1 128 G n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 128 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Burkholderia sp. TJI49' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 987057 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'in vitro transcription vector pT7-TP(deltai)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 905931 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7MLW _struct_ref.pdbx_db_accession 7MLW _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7MLW _struct_ref_seq.pdbx_strand_id F _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 128 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 7MLW _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 128 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 128 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GAI non-polymer . GUANIDINE ? 'C H5 N3' 59.070 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 SR non-polymer . 'STRONTIUM ION' ? 'Sr 2' 87.620 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7MLW _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 288 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50 mM HEPES (pH 7.5), 200 mM ammonium sulfate, 10 mM strontium chloride, 30% PEG 3350, 3% isopropanol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-04-14 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9919 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9919 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate 67.71 _reflns.entry_id 7MLW _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.7 _reflns.d_resolution_low 7.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11350 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 18.2 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 25.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.99 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.85 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 4.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 936 _reflns_shell.percent_possible_all 99.6 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.73 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 18.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.92 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 98.08 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7MLW _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.70 _refine.ls_d_res_low 6.99 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11350 _refine.ls_number_reflns_R_free 1143 _refine.ls_number_reflns_R_work 10207 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.73 _refine.ls_percent_reflns_R_free 10.07 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2232 _refine.ls_R_factor_R_free 0.2703 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2181 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5T83 _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.8037 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3528 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.70 _refine_hist.d_res_low 6.99 _refine_hist.number_atoms_solvent 13 _refine_hist.number_atoms_total 2725 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2680 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0056 ? 3039 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.1549 ? 4732 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0488 ? 629 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0079 ? 127 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 17.3084 ? 1499 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.70 2.82 . . 140 1241 100.00 . . . 0.3731 . 0.3483 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.82 2.95 . . 138 1243 99.93 . . . 0.3527 . 0.3058 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.95 3.12 . . 143 1256 99.43 . . . 0.2645 . 0.2890 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.12 3.34 . . 137 1256 99.15 . . . 0.2854 . 0.2173 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.34 3.63 . . 144 1272 99.51 . . . 0.2732 . 0.2278 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.63 4.06 . . 143 1293 99.79 . . . 0.2401 . 0.2034 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.07 4.82 . . 148 1297 100.00 . . . 0.2457 . 0.2001 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.82 6.99 . . 150 1349 100.00 . . . 0.2704 . 0.1828 . . . . . . . . . . . # _struct.entry_id 7MLW _struct.title 'Burkholderia sp. TJI49 Guanidine-I riboswitch' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7MLW _struct_keywords.text 'Riboswitch, guanidine, potassium, ion, A-minor, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 6 ? M N N 6 ? N N N 6 ? O N N 7 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 12 O6 ? ? ? 1_555 H SR . SR ? ? F G 12 F SR 207 1_555 ? ? ? ? ? ? ? 2.690 ? ? metalc2 metalc ? ? A U 13 O4 ? ? ? 1_555 H SR . SR ? ? F U 13 F SR 207 1_555 ? ? ? ? ? ? ? 2.634 ? ? metalc3 metalc ? ? A A 53 "O3'" ? ? ? 1_555 M K . K ? ? F A 53 F K 212 1_555 ? ? ? ? ? ? ? 3.189 ? ? metalc4 metalc ? ? A A 53 "O2'" ? ? ? 1_555 M K . K ? ? F A 53 F K 212 1_555 ? ? ? ? ? ? ? 2.543 ? ? metalc5 metalc ? ? A G 54 OP1 ? ? ? 1_555 I MG . MG ? ? F G 54 F MG 208 1_555 ? ? ? ? ? ? ? 2.413 ? ? metalc6 metalc ? ? A G 54 OP2 ? ? ? 1_555 J MG . MG ? ? F G 54 F MG 209 1_555 ? ? ? ? ? ? ? 2.049 ? ? metalc7 metalc ? ? A G 54 OP1 ? ? ? 1_555 M K . K ? ? F G 54 F K 212 1_555 ? ? ? ? ? ? ? 3.123 ? ? metalc8 metalc ? ? A U 114 O4 ? ? ? 1_555 N K . K ? ? F U 114 F K 213 1_555 ? ? ? ? ? ? ? 2.875 ? ? metalc9 metalc ? ? A A 117 OP2 ? ? ? 1_555 N K . K ? ? F A 117 F K 213 1_555 ? ? ? ? ? ? ? 2.832 ? ? metalc10 metalc ? ? A C 120 OP1 ? ? ? 1_555 I MG . MG ? ? F C 120 F MG 208 1_555 ? ? ? ? ? ? ? 2.566 ? ? metalc11 metalc ? ? A C 120 OP1 ? ? ? 1_555 M K . K ? ? F C 120 F K 212 1_555 ? ? ? ? ? ? ? 2.939 ? ? metalc12 metalc ? ? A C 121 OP2 ? ? ? 1_555 I MG . MG ? ? F C 121 F MG 208 1_555 ? ? ? ? ? ? ? 1.978 ? ? metalc13 metalc ? ? A C 121 OP1 ? ? ? 1_555 J MG . MG ? ? F C 121 F MG 209 1_555 ? ? ? ? ? ? ? 2.445 ? ? metalc14 metalc ? ? G SR . SR ? ? ? 1_555 O HOH . O ? ? F SR 206 F HOH 307 1_555 ? ? ? ? ? ? ? 2.558 ? ? metalc15 metalc ? ? I MG . MG ? ? ? 1_555 O HOH . O ? ? F MG 208 F HOH 310 1_555 ? ? ? ? ? ? ? 2.161 ? ? metalc16 metalc ? ? M K . K ? ? ? 1_555 O HOH . O ? ? F K 212 F HOH 305 1_555 ? ? ? ? ? ? ? 2.827 ? ? metalc17 metalc ? ? M K . K ? ? ? 1_555 O HOH . O ? ? F K 212 F HOH 310 1_555 ? ? ? ? ? ? ? 2.847 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 62 N3 ? ? F G 1 F C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 62 O2 ? ? F G 1 F C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 62 N4 ? ? F G 1 F C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 61 N3 ? ? F G 2 F C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 61 O2 ? ? F G 2 F C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 61 N4 ? ? F G 2 F C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 60 N3 ? ? F A 3 F U 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 60 O4 ? ? F A 3 F U 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 4 N3 ? ? ? 1_555 A A 59 N1 ? ? F U 4 F A 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 4 O4 ? ? ? 1_555 A A 59 N6 ? ? F U 4 F A 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 5 N4 ? ? ? 1_555 A A 58 N1 ? ? F C 5 F A 58 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog12 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 57 N3 ? ? F G 6 F C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 57 O2 ? ? F G 6 F C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 57 N4 ? ? F G 6 F C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 56 N1 ? ? F C 7 F G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 56 O6 ? ? F C 7 F G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 56 N2 ? ? F C 7 F G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 53 N7 ? ? F U 8 F A 53 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog19 hydrog ? ? A U 8 O2 ? ? ? 1_555 A A 53 N6 ? ? F U 8 F A 53 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog20 hydrog ? ? A A 9 N6 ? ? ? 1_555 A G 52 N3 ? ? F A 9 F G 52 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog21 hydrog ? ? A A 9 N7 ? ? ? 1_555 A G 52 N2 ? ? F A 9 F G 52 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog22 hydrog ? ? A G 10 N1 ? ? ? 1_555 A C 51 N3 ? ? F G 10 F C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 10 N2 ? ? ? 1_555 A C 51 O2 ? ? F G 10 F C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 51 N4 ? ? F G 10 F C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 10 N2 ? ? ? 1_555 A A 118 N3 ? ? F G 10 F A 118 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog26 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 50 N3 ? ? F G 11 F C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 50 O2 ? ? F G 11 F C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 50 N4 ? ? F G 11 F C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 12 N2 ? ? ? 1_555 A U 14 O4 ? ? F G 12 F U 14 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog30 hydrog ? ? A G 12 N1 ? ? ? 1_555 A U 49 O4 ? ? F G 12 F U 49 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog31 hydrog ? ? A G 12 N2 ? ? ? 1_555 A A 115 N1 ? ? F G 12 F A 115 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog32 hydrog ? ? A U 13 O2 ? ? ? 1_555 A C 15 N4 ? ? F U 13 F C 15 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog33 hydrog ? ? A U 14 O4 ? ? ? 1_555 A U 49 N3 ? ? F U 14 F U 49 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog34 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 48 N1 ? ? F C 15 F G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 48 O6 ? ? F C 15 F G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 48 N2 ? ? F C 15 F G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 16 N4 ? ? ? 1_555 A G 44 O6 ? ? F C 16 F G 44 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog38 hydrog ? ? A C 16 N3 ? ? ? 1_555 A G 47 N1 ? ? F C 16 F G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 16 N4 ? ? ? 1_555 A G 47 O6 ? ? F C 16 F G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 16 O2 ? ? ? 1_555 A G 47 N2 ? ? F C 16 F G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 45 N3 ? ? F G 17 F C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 45 O2 ? ? F G 17 F C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 45 N4 ? ? F G 17 F C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 17 N2 ? ? ? 1_555 A U 46 O4 ? ? F G 17 F U 46 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog45 hydrog ? ? A G 18 N1 ? ? ? 1_555 A U 43 O2 ? ? F G 18 F U 43 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog46 hydrog ? ? A G 18 O6 ? ? ? 1_555 A U 43 N3 ? ? F G 18 F U 43 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog47 hydrog ? ? A U 19 N3 ? ? ? 1_555 A A 42 N1 ? ? F U 19 F A 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A U 19 O4 ? ? ? 1_555 A A 42 N6 ? ? F U 19 F A 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 20 N3 ? ? ? 1_555 A G 41 N1 ? ? F C 20 F G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 20 N4 ? ? ? 1_555 A G 41 O6 ? ? F C 20 F G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 20 O2 ? ? ? 1_555 A G 41 N2 ? ? F C 20 F G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 21 N1 ? ? ? 1_555 A C 40 N3 ? ? F G 21 F C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 21 N2 ? ? ? 1_555 A C 40 O2 ? ? F G 21 F C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 21 O6 ? ? ? 1_555 A C 40 N4 ? ? F G 21 F C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A U 22 N3 ? ? ? 1_555 A A 39 N1 ? ? F U 22 F A 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A U 22 O4 ? ? ? 1_555 A A 39 N6 ? ? F U 22 F A 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 38 N3 ? ? F G 23 F C 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 38 O2 ? ? F G 23 F C 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 38 N4 ? ? F G 23 F C 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A C 24 N3 ? ? ? 1_555 A G 37 N1 ? ? F C 24 F G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 24 N4 ? ? ? 1_555 A G 37 O6 ? ? F C 24 F G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 24 O2 ? ? ? 1_555 A G 37 N2 ? ? F C 24 F G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 25 O6 ? ? ? 1_555 A C 36 N4 ? ? F G 25 F C 36 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog64 hydrog ? ? A G 26 N1 ? ? ? 1_555 A C 35 N3 ? ? F G 26 F C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A G 26 N2 ? ? ? 1_555 A C 35 O2 ? ? F G 26 F C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A G 26 O6 ? ? ? 1_555 A C 35 N4 ? ? F G 26 F C 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 27 N3 ? ? ? 1_555 A G 34 N1 ? ? F C 27 F G 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 27 N4 ? ? ? 1_555 A G 34 O6 ? ? F C 27 F G 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A C 27 O2 ? ? ? 1_555 A G 34 N2 ? ? F C 27 F G 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 28 N1 ? ? ? 1_555 A C 33 N3 ? ? F G 28 F C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A G 28 N2 ? ? ? 1_555 A C 33 O2 ? ? F G 28 F C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 28 O6 ? ? ? 1_555 A C 33 N4 ? ? F G 28 F C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 44 N1 ? ? ? 1_555 A G 47 O6 ? ? F G 44 F G 47 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog74 hydrog ? ? A G 44 N2 ? ? ? 1_555 A G 47 N7 ? ? F G 44 F G 47 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog75 hydrog ? ? A G 54 N2 ? ? ? 1_555 A A 105 N3 ? ? F G 54 F A 105 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog76 hydrog ? ? A C 62 N4 ? ? ? 1_555 A U 102 O4 ? ? F C 62 F U 102 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog77 hydrog ? ? A G 63 N1 A ? ? 1_555 A U 102 O2 ? ? F G 63 F U 102 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog78 hydrog ? ? A G 63 O6 A ? ? 1_555 A U 102 N3 ? ? F G 63 F U 102 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog79 hydrog ? ? A G 64 N2 ? ? ? 1_555 A C 101 O2 ? ? F G 64 F C 101 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog80 hydrog ? ? A C 66 O2 ? ? ? 1_555 A G 99 N2 ? ? F C 66 F G 99 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog81 hydrog ? ? A C 66 O2 ? ? ? 1_555 A G 100 N2 ? ? F C 66 F G 100 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog82 hydrog ? ? A U 67 N3 ? ? ? 1_555 A A 98 N1 ? ? F U 67 F A 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A U 67 O4 ? ? ? 1_555 A A 98 N6 ? ? F U 67 F A 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A U 68 N3 ? ? ? 1_555 A G 97 O6 ? ? F U 68 F G 97 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog85 hydrog ? ? A U 68 O2 ? ? ? 1_555 A G 97 N1 ? ? F U 68 F G 97 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog86 hydrog ? ? A G 69 N1 ? ? ? 1_555 A C 96 N3 ? ? F G 69 F C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A G 69 N2 ? ? ? 1_555 A C 96 O2 ? ? F G 69 F C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A G 69 O6 ? ? ? 1_555 A C 96 N4 ? ? F G 69 F C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A C 70 N4 ? ? ? 1_555 A G 95 O6 ? ? F C 70 F G 95 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog90 hydrog ? ? A C 71 N3 ? ? ? 1_555 A G 94 N1 ? ? F C 71 F G 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A C 71 N4 ? ? ? 1_555 A G 94 O6 ? ? F C 71 F G 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A C 71 O2 ? ? ? 1_555 A G 94 N2 ? ? F C 71 F G 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A U 73 N3 ? ? ? 1_555 A A 92 N1 ? ? F U 73 F A 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? A U 73 O4 ? ? ? 1_555 A A 92 N6 ? ? F U 73 F A 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? A G 75 N1 ? ? ? 1_555 A A 90 N1 ? ? F G 75 F A 90 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog96 hydrog ? ? A G 75 O6 ? ? ? 1_555 A A 90 N6 ? ? F G 75 F A 90 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog97 hydrog ? ? A C 76 N3 ? ? ? 1_555 A G 89 N1 ? ? F C 76 F G 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A C 76 N4 ? ? ? 1_555 A G 89 O6 ? ? F C 76 F G 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? A C 76 O2 ? ? ? 1_555 A G 89 N2 ? ? F C 76 F G 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? A C 77 N3 ? ? ? 1_555 A G 88 N1 ? ? F C 77 F G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? A C 77 N4 ? ? ? 1_555 A G 88 O6 ? ? F C 77 F G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? A C 77 O2 ? ? ? 1_555 A G 88 N2 ? ? F C 77 F G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A U 78 N3 ? ? ? 1_555 A A 87 N1 ? ? F U 78 F A 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A U 78 O4 ? ? ? 1_555 A A 87 N6 ? ? F U 78 F A 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A C 79 N3 ? ? ? 1_555 A G 86 N1 ? ? F C 79 F G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A C 79 N4 ? ? ? 1_555 A G 86 O6 ? ? F C 79 F G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? A C 79 O2 ? ? ? 1_555 A G 86 N2 ? ? F C 79 F G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A G 80 O6 ? ? ? 1_555 A C 85 N4 ? ? F G 80 F C 85 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog109 hydrog ? ? A U 81 O2 ? ? ? 1_555 A G 84 N2 ? ? F U 81 F G 84 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog110 hydrog ? ? A U 81 O2 ? ? ? 1_555 A C 85 N4 ? ? F U 81 F C 85 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog111 hydrog ? ? A C 104 N3 ? ? ? 1_555 A G 124 N1 ? ? F C 104 F G 124 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A C 104 N4 ? ? ? 1_555 A G 124 O6 ? ? F C 104 F G 124 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A C 104 O2 ? ? ? 1_555 A G 124 N2 ? ? F C 104 F G 124 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A C 106 N3 ? ? ? 1_555 A G 127 N1 ? ? F C 106 F G 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? A C 106 N4 ? ? ? 1_555 A G 127 O6 ? ? F C 106 F G 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? A C 106 O2 ? ? ? 1_555 A G 127 N2 ? ? F C 106 F G 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? A G 107 N2 ? ? ? 1_555 A A 126 N7 ? ? F G 107 F A 126 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog118 hydrog ? ? A G 107 N3 ? ? ? 1_555 A A 126 N6 ? ? F G 107 F A 126 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog119 hydrog ? ? A G 108 N7 ? ? ? 1_555 A G 125 N1 ? ? F G 108 F G 125 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog120 hydrog ? ? A G 108 O6 ? ? ? 1_555 A G 125 N2 ? ? F G 108 F G 125 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog121 hydrog ? ? A A 109 N6 ? ? ? 1_555 A G 123 O6 ? ? F A 109 F G 123 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog122 hydrog ? ? A G 110 N1 ? ? ? 1_555 A C 122 N3 ? ? F G 110 F C 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? A G 110 N2 ? ? ? 1_555 A C 122 O2 ? ? F G 110 F C 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? A G 110 O6 ? ? ? 1_555 A C 122 N4 ? ? F G 110 F C 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? A G 111 N1 ? ? ? 1_555 A C 121 N3 ? ? F G 111 F C 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? A G 111 N2 ? ? ? 1_555 A C 121 O2 ? ? F G 111 F C 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? A G 111 O6 ? ? ? 1_555 A C 121 N4 ? ? F G 111 F C 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? A G 112 N1 ? ? ? 1_555 A C 120 N3 ? ? F G 112 F C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? A G 112 N2 ? ? ? 1_555 A C 120 O2 ? ? F G 112 F C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? A G 112 O6 ? ? ? 1_555 A C 120 N4 ? ? F G 112 F C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? A A 113 N1 ? ? ? 1_555 A A 118 N6 ? ? F A 113 F A 118 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog132 hydrog ? ? A A 113 N6 ? ? ? 1_555 A A 118 N7 ? ? F A 113 F A 118 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog133 hydrog ? ? A U 114 N3 ? ? ? 1_555 A A 117 N7 ? ? F U 114 F A 117 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog134 hydrog ? ? A U 114 O2 ? ? ? 1_555 A A 117 N6 ? ? F U 114 F A 117 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _atom_sites.entry_id 7MLW _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.019341 _atom_sites.fract_transf_matrix[1][2] 0.011167 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022333 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003749 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? K ? ? 16.37977 2.54835 ? ? 4.54127 84.28225 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? MG ? ? 9.41153 2.53737 ? ? 2.59044 63.03566 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? SR ? ? 32.18652 5.63919 ? ? 2.35430 57.90393 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 ;Residues C F 62 and G F 63 that are next to each other in the sample sequence are not properly linked: distance between O3' and P (B conformer) is 4.03 A. ; 2 ;Residues G F 63 and G F 64 that are next to each other in the sample sequence are not properly linked: distance between O3' (B conformer) and P is 5.67 A. ; 3 ;Residues G F 63 and G F 64 that are next to each other in the sample sequence are not properly linked: distance between O3' (A conformer) and P is 7.63 A. ; # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G F . n A 1 2 G 2 2 2 G G F . n A 1 3 A 3 3 3 A A F . n A 1 4 U 4 4 4 U U F . n A 1 5 C 5 5 5 C C F . n A 1 6 G 6 6 6 G G F . n A 1 7 C 7 7 7 C C F . n A 1 8 U 8 8 8 U U F . n A 1 9 A 9 9 9 A A F . n A 1 10 G 10 10 10 G G F . n A 1 11 G 11 11 11 G G F . n A 1 12 G 12 12 12 G G F . n A 1 13 U 13 13 13 U U F . n A 1 14 U 14 14 14 U U F . n A 1 15 C 15 15 15 C C F . n A 1 16 C 16 16 16 C C F . n A 1 17 G 17 17 17 G G F . n A 1 18 G 18 18 18 G G F . n A 1 19 U 19 19 19 U U F . n A 1 20 C 20 20 20 C C F . n A 1 21 G 21 21 21 G G F . n A 1 22 U 22 22 22 U U F . n A 1 23 G 23 23 23 G G F . n A 1 24 C 24 24 24 C C F . n A 1 25 G 25 25 25 G G F . n A 1 26 G 26 26 26 G G F . n A 1 27 C 27 27 27 C C F . n A 1 28 G 28 28 28 G G F . n A 1 29 U 29 29 29 U U F . n A 1 30 U 30 30 ? ? ? F . n A 1 31 C 31 31 ? ? ? F . n A 1 32 G 32 32 ? ? ? F . n A 1 33 C 33 33 33 C C F . n A 1 34 G 34 34 34 G G F . n A 1 35 C 35 35 35 C C F . n A 1 36 C 36 36 36 C C F . n A 1 37 G 37 37 37 G G F . n A 1 38 C 38 38 38 C C F . n A 1 39 A 39 39 39 A A F . n A 1 40 C 40 40 40 C C F . n A 1 41 G 41 41 41 G G F . n A 1 42 A 42 42 42 A A F . n A 1 43 U 43 43 43 U U F . n A 1 44 G 44 44 44 G G F . n A 1 45 C 45 45 45 C C F . n A 1 46 U 46 46 46 U U F . n A 1 47 G 47 47 47 G G F . n A 1 48 G 48 48 48 G G F . n A 1 49 U 49 49 49 U U F . n A 1 50 C 50 50 50 C C F . n A 1 51 C 51 51 51 C C F . n A 1 52 G 52 52 52 G G F . n A 1 53 A 53 53 53 A A F . n A 1 54 G 54 54 54 G G F . n A 1 55 A 55 55 55 A A F . n A 1 56 G 56 56 56 G G F . n A 1 57 C 57 57 57 C C F . n A 1 58 A 58 58 58 A A F . n A 1 59 A 59 59 59 A A F . n A 1 60 U 60 60 60 U U F . n A 1 61 C 61 61 61 C C F . n A 1 62 C 62 62 62 C C F . n A 1 63 G 63 63 63 G G F . n A 1 64 G 64 64 64 G G F . n A 1 65 U 65 65 65 U U F . n A 1 66 C 66 66 66 C C F . n A 1 67 U 67 67 67 U U F . n A 1 68 U 68 68 68 U U F . n A 1 69 G 69 69 69 G G F . n A 1 70 C 70 70 70 C C F . n A 1 71 C 71 71 71 C C F . n A 1 72 U 72 72 72 U U F . n A 1 73 U 73 73 73 U U F . n A 1 74 C 74 74 74 C C F . n A 1 75 G 75 75 75 G G F . n A 1 76 C 76 76 76 C C F . n A 1 77 C 77 77 77 C C F . n A 1 78 U 78 78 78 U U F . n A 1 79 C 79 79 79 C C F . n A 1 80 G 80 80 80 G G F . n A 1 81 U 81 81 81 U U F . n A 1 82 U 82 82 82 U U F . n A 1 83 C 83 83 83 C C F . n A 1 84 G 84 84 84 G G F . n A 1 85 C 85 85 85 C C F . n A 1 86 G 86 86 86 G G F . n A 1 87 A 87 87 87 A A F . n A 1 88 G 88 88 88 G G F . n A 1 89 G 89 89 89 G G F . n A 1 90 A 90 90 90 A A F . n A 1 91 A 91 91 91 A A F . n A 1 92 A 92 92 92 A A F . n A 1 93 C 93 93 93 C C F . n A 1 94 G 94 94 94 G G F . n A 1 95 G 95 95 95 G G F . n A 1 96 C 96 96 96 C C F . n A 1 97 G 97 97 97 G G F . n A 1 98 A 98 98 98 A A F . n A 1 99 G 99 99 99 G G F . n A 1 100 G 100 100 100 G G F . n A 1 101 C 101 101 101 C C F . n A 1 102 U 102 102 102 U U F . n A 1 103 C 103 103 103 C C F . n A 1 104 C 104 104 104 C C F . n A 1 105 A 105 105 105 A A F . n A 1 106 C 106 106 106 C C F . n A 1 107 G 107 107 107 G G F . n A 1 108 G 108 108 108 G G F . n A 1 109 A 109 109 109 A A F . n A 1 110 G 110 110 110 G G F . n A 1 111 G 111 111 111 G G F . n A 1 112 G 112 112 112 G G F . n A 1 113 A 113 113 113 A A F . n A 1 114 U 114 114 114 U U F . n A 1 115 A 115 115 115 A A F . n A 1 116 A 116 116 116 A A F . n A 1 117 A 117 117 117 A A F . n A 1 118 A 118 118 118 A A F . n A 1 119 G 119 119 119 G G F . n A 1 120 C 120 120 120 C C F . n A 1 121 C 121 121 121 C C F . n A 1 122 C 122 122 122 C C F . n A 1 123 G 123 123 123 G G F . n A 1 124 G 124 124 124 G G F . n A 1 125 G 125 125 125 G G F . n A 1 126 A 126 126 126 A A F . n A 1 127 G 127 127 127 G G F . n A 1 128 G 128 128 128 G G F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GAI 1 201 1 GAI GUN F . C 3 PO4 1 202 1 PO4 PO4 F . D 3 PO4 1 203 2 PO4 PO4 F . E 3 PO4 1 204 3 PO4 PO4 F . F 3 PO4 1 205 4 PO4 PO4 F . G 4 SR 1 206 1 SR SR F . H 4 SR 1 207 2 SR SR F . I 5 MG 1 208 1 MG MG F . J 5 MG 1 209 2 MG MG F . K 5 MG 1 210 3 MG MG F . L 6 K 1 211 1 K K F . M 6 K 1 212 2 K K F . N 6 K 1 213 3 K K F . O 7 HOH 1 301 6 HOH HOH F . O 7 HOH 2 302 4 HOH HOH F . O 7 HOH 3 303 11 HOH HOH F . O 7 HOH 4 304 5 HOH HOH F . O 7 HOH 5 305 9 HOH HOH F . O 7 HOH 6 306 14 HOH HOH F . O 7 HOH 7 307 12 HOH HOH F . O 7 HOH 8 308 10 HOH HOH F . O 7 HOH 9 309 15 HOH HOH F . O 7 HOH 10 310 7 HOH HOH F . O 7 HOH 11 311 13 HOH HOH F . O 7 HOH 12 312 8 HOH HOH F . O 7 HOH 13 313 16 HOH HOH F . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A G 12 ? F G 12 ? 1_555 SR ? H SR . ? F SR 207 ? 1_555 O4 ? A U 13 ? F U 13 ? 1_555 68.9 ? 2 "O3'" ? A A 53 ? F A 53 ? 1_555 K ? M K . ? F K 212 ? 1_555 "O2'" ? A A 53 ? F A 53 ? 1_555 56.0 ? 3 "O3'" ? A A 53 ? F A 53 ? 1_555 K ? M K . ? F K 212 ? 1_555 OP1 ? A G 54 ? F G 54 ? 1_555 46.7 ? 4 "O2'" ? A A 53 ? F A 53 ? 1_555 K ? M K . ? F K 212 ? 1_555 OP1 ? A G 54 ? F G 54 ? 1_555 95.3 ? 5 "O3'" ? A A 53 ? F A 53 ? 1_555 K ? M K . ? F K 212 ? 1_555 OP1 ? A C 120 ? F C 120 ? 1_555 66.0 ? 6 "O2'" ? A A 53 ? F A 53 ? 1_555 K ? M K . ? F K 212 ? 1_555 OP1 ? A C 120 ? F C 120 ? 1_555 114.7 ? 7 OP1 ? A G 54 ? F G 54 ? 1_555 K ? M K . ? F K 212 ? 1_555 OP1 ? A C 120 ? F C 120 ? 1_555 59.4 ? 8 "O3'" ? A A 53 ? F A 53 ? 1_555 K ? M K . ? F K 212 ? 1_555 O ? O HOH . ? F HOH 305 ? 1_555 111.8 ? 9 "O2'" ? A A 53 ? F A 53 ? 1_555 K ? M K . ? F K 212 ? 1_555 O ? O HOH . ? F HOH 305 ? 1_555 66.5 ? 10 OP1 ? A G 54 ? F G 54 ? 1_555 K ? M K . ? F K 212 ? 1_555 O ? O HOH . ? F HOH 305 ? 1_555 158.5 ? 11 OP1 ? A C 120 ? F C 120 ? 1_555 K ? M K . ? F K 212 ? 1_555 O ? O HOH . ? F HOH 305 ? 1_555 116.5 ? 12 "O3'" ? A A 53 ? F A 53 ? 1_555 K ? M K . ? F K 212 ? 1_555 O ? O HOH . ? F HOH 310 ? 1_555 97.7 ? 13 "O2'" ? A A 53 ? F A 53 ? 1_555 K ? M K . ? F K 212 ? 1_555 O ? O HOH . ? F HOH 310 ? 1_555 148.7 ? 14 OP1 ? A G 54 ? F G 54 ? 1_555 K ? M K . ? F K 212 ? 1_555 O ? O HOH . ? F HOH 310 ? 1_555 54.0 ? 15 OP1 ? A C 120 ? F C 120 ? 1_555 K ? M K . ? F K 212 ? 1_555 O ? O HOH . ? F HOH 310 ? 1_555 58.1 ? 16 O ? O HOH . ? F HOH 305 ? 1_555 K ? M K . ? F K 212 ? 1_555 O ? O HOH . ? F HOH 310 ? 1_555 144.8 ? 17 OP1 ? A G 54 ? F G 54 ? 1_555 MG ? I MG . ? F MG 208 ? 1_555 OP1 ? A C 120 ? F C 120 ? 1_555 74.2 ? 18 OP1 ? A G 54 ? F G 54 ? 1_555 MG ? I MG . ? F MG 208 ? 1_555 OP2 ? A C 121 ? F C 121 ? 1_555 90.5 ? 19 OP1 ? A C 120 ? F C 120 ? 1_555 MG ? I MG . ? F MG 208 ? 1_555 OP2 ? A C 121 ? F C 121 ? 1_555 89.8 ? 20 OP1 ? A G 54 ? F G 54 ? 1_555 MG ? I MG . ? F MG 208 ? 1_555 O ? O HOH . ? F HOH 310 ? 1_555 72.8 ? 21 OP1 ? A C 120 ? F C 120 ? 1_555 MG ? I MG . ? F MG 208 ? 1_555 O ? O HOH . ? F HOH 310 ? 1_555 72.4 ? 22 OP2 ? A C 121 ? F C 121 ? 1_555 MG ? I MG . ? F MG 208 ? 1_555 O ? O HOH . ? F HOH 310 ? 1_555 158.2 ? 23 OP2 ? A G 54 ? F G 54 ? 1_555 MG ? J MG . ? F MG 209 ? 1_555 OP1 ? A C 121 ? F C 121 ? 1_555 78.7 ? 24 O4 ? A U 114 ? F U 114 ? 1_555 K ? N K . ? F K 213 ? 1_555 OP2 ? A A 117 ? F A 117 ? 1_555 63.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-01-12 2 'Structure model' 1 1 2023-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z+2/3 3 -x+y,-x,z+1/3 4 x-y,-y,-z+1/3 5 -x,-x+y,-z+2/3 6 y,x,-z # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -13.8534670905 _pdbx_refine_tls.origin_y 3.73034604913 _pdbx_refine_tls.origin_z -18.2165343402 _pdbx_refine_tls.T[1][1] 0.509819820509 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0443216223163 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0981496360206 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.849977218286 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.073044706201 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.417252805292 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 1.26654887555 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 0.29059107518 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 0.190243280122 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 1.02776674007 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.640861134726 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 3.23098813948 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0534112445843 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.242455832669 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] 0.0717136406825 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.13831231811 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.313241710716 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.207410270496 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.116994830733 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -1.338783507 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.0923387249597 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id G _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id O _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id F _pdbx_refine_tls_group.end_auth_seq_id 128 _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19_4080 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 7MLW _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O4 F U 67 ? ? O F HOH 301 ? ? 2.09 2 1 "O2'" F G 10 ? ? N2 F G 119 ? ? 2.17 3 1 O6 F G 112 ? ? O F HOH 302 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" F G 56 ? ? P F G 56 ? ? OP2 F G 56 ? ? 100.12 105.70 -5.58 0.90 N 2 1 "O4'" F U 67 ? ? "C1'" F U 67 ? ? N1 F U 67 ? ? 115.76 108.50 7.26 0.70 N 3 1 "O4'" F C 71 ? ? "C1'" F C 71 ? ? N1 F C 71 ? ? 113.07 108.50 4.57 0.70 N 4 1 C5 F U 114 ? ? C6 F U 114 ? ? N1 F U 114 ? ? 119.58 122.70 -3.12 0.50 N 5 1 "O5'" F A 116 ? ? P F A 116 ? ? OP1 F A 116 ? ? 99.79 105.70 -5.91 0.90 N 6 1 C2 F G 119 ? ? N3 F G 119 ? ? C4 F G 119 ? ? 108.74 111.90 -3.16 0.50 N 7 1 C4 F G 119 ? ? C5 F G 119 ? ? N7 F G 119 ? ? 113.42 110.80 2.62 0.40 N 8 1 C5 F G 119 ? ? N7 F G 119 ? ? C8 F G 119 ? ? 100.66 104.30 -3.64 0.50 N 9 1 N7 F G 119 ? ? C8 F G 119 ? ? N9 F G 119 ? ? 116.47 113.10 3.37 0.50 N 10 1 C6 F G 119 ? ? C5 F G 119 ? ? N7 F G 119 ? ? 124.68 130.40 -5.72 0.60 N 11 1 N1 F G 119 ? ? C6 F G 119 ? ? O6 F G 119 ? ? 124.43 119.90 4.53 0.60 N # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 "O3'" F C 62 ? ? P F G 63 ? B 4.03 2 1 "O3'" F G 63 ? B P F G 64 ? ? 5.67 3 1 "O3'" F G 63 ? A P F G 64 ? ? 7.63 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 F U 30 ? A U 30 2 1 Y 1 F C 31 ? A C 31 3 1 Y 1 F G 32 ? A G 32 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 GAI C C N N 111 GAI N1 N N N 112 GAI N2 N N N 113 GAI N3 N N N 114 GAI HN1 H N N 115 GAI HN21 H N N 116 GAI HN22 H N N 117 GAI HN31 H N N 118 GAI HN32 H N N 119 HOH O O N N 120 HOH H1 H N N 121 HOH H2 H N N 122 K K K N N 123 MG MG MG N N 124 PO4 P P N N 125 PO4 O1 O N N 126 PO4 O2 O N N 127 PO4 O3 O N N 128 PO4 O4 O N N 129 SR SR SR N N 130 U OP3 O N N 131 U P P N N 132 U OP1 O N N 133 U OP2 O N N 134 U "O5'" O N N 135 U "C5'" C N N 136 U "C4'" C N R 137 U "O4'" O N N 138 U "C3'" C N S 139 U "O3'" O N N 140 U "C2'" C N R 141 U "O2'" O N N 142 U "C1'" C N R 143 U N1 N N N 144 U C2 C N N 145 U O2 O N N 146 U N3 N N N 147 U C4 C N N 148 U O4 O N N 149 U C5 C N N 150 U C6 C N N 151 U HOP3 H N N 152 U HOP2 H N N 153 U "H5'" H N N 154 U "H5''" H N N 155 U "H4'" H N N 156 U "H3'" H N N 157 U "HO3'" H N N 158 U "H2'" H N N 159 U "HO2'" H N N 160 U "H1'" H N N 161 U H3 H N N 162 U H5 H N N 163 U H6 H N N 164 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 GAI C N1 doub N N 116 GAI C N2 sing N N 117 GAI C N3 sing N N 118 GAI N1 HN1 sing N N 119 GAI N2 HN21 sing N N 120 GAI N2 HN22 sing N N 121 GAI N3 HN31 sing N N 122 GAI N3 HN32 sing N N 123 HOH O H1 sing N N 124 HOH O H2 sing N N 125 PO4 P O1 doub N N 126 PO4 P O2 sing N N 127 PO4 P O3 sing N N 128 PO4 P O4 sing N N 129 U OP3 P sing N N 130 U OP3 HOP3 sing N N 131 U P OP1 doub N N 132 U P OP2 sing N N 133 U P "O5'" sing N N 134 U OP2 HOP2 sing N N 135 U "O5'" "C5'" sing N N 136 U "C5'" "C4'" sing N N 137 U "C5'" "H5'" sing N N 138 U "C5'" "H5''" sing N N 139 U "C4'" "O4'" sing N N 140 U "C4'" "C3'" sing N N 141 U "C4'" "H4'" sing N N 142 U "O4'" "C1'" sing N N 143 U "C3'" "O3'" sing N N 144 U "C3'" "C2'" sing N N 145 U "C3'" "H3'" sing N N 146 U "O3'" "HO3'" sing N N 147 U "C2'" "O2'" sing N N 148 U "C2'" "C1'" sing N N 149 U "C2'" "H2'" sing N N 150 U "O2'" "HO2'" sing N N 151 U "C1'" N1 sing N N 152 U "C1'" "H1'" sing N N 153 U N1 C2 sing N N 154 U N1 C6 sing N N 155 U C2 O2 doub N N 156 U C2 N3 sing N N 157 U N3 C4 sing N N 158 U N3 H3 sing N N 159 U C4 O4 doub N N 160 U C4 C5 sing N N 161 U C5 C6 doub N N 162 U C5 H5 sing N N 163 U C6 H6 sing N N 164 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7MLW 'double helix' 7MLW 'a-form double helix' 7MLW 'hairpin loop' 7MLW tetraloop 7MLW 'bulge loop' 7MLW 'mismatched base pair' 7MLW 'internal loop' 7MLW 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 33 1_555 A G 28 1_555 -0.534 0.269 -0.113 -12.750 13.383 -2.413 1 F_C33:G28_F F 33 ? F 28 ? 19 1 1 A G 34 1_555 A C 27 1_555 -1.244 -0.028 0.224 5.649 -8.960 0.307 2 F_G34:C27_F F 34 ? F 27 ? 19 1 1 A C 35 1_555 A G 26 1_555 -0.087 -0.631 -0.575 18.442 -2.721 -6.036 3 F_C35:G26_F F 35 ? F 26 ? 19 1 1 A C 36 1_555 A G 25 1_555 -1.383 0.085 -2.101 38.939 -12.101 -36.186 4 F_C36:G25_F F 36 ? F 25 ? ? 1 1 A G 37 1_555 A C 24 1_555 -0.650 0.286 0.180 0.941 -7.009 7.483 5 F_G37:C24_F F 37 ? F 24 ? 19 1 1 A C 38 1_555 A G 23 1_555 0.026 -0.172 0.192 2.286 -3.013 -2.373 6 F_C38:G23_F F 38 ? F 23 ? 19 1 1 A A 39 1_555 A U 22 1_555 -0.341 -0.149 0.314 4.852 -21.597 -0.258 7 F_A39:U22_F F 39 ? F 22 ? 20 1 1 A C 40 1_555 A G 21 1_555 0.690 0.002 0.109 -0.595 -12.888 7.867 8 F_C40:G21_F F 40 ? F 21 ? 19 1 1 A G 41 1_555 A C 20 1_555 -0.188 -0.453 0.141 -1.083 -12.293 1.253 9 F_G41:C20_F F 41 ? F 20 ? 19 1 1 A A 42 1_555 A U 19 1_555 -0.400 -0.425 -0.033 -1.589 -15.111 -1.579 10 F_A42:U19_F F 42 ? F 19 ? 20 1 1 A U 43 1_555 A G 18 1_555 2.661 -0.600 0.253 -0.401 -11.172 0.141 11 F_U43:G18_F F 43 ? F 18 ? 28 1 1 A C 45 1_555 A G 17 1_555 0.688 0.067 -0.511 -4.961 -6.674 5.156 12 F_C45:G17_F F 45 ? F 17 ? 19 1 1 A G 47 1_555 A C 16 1_555 -0.932 -0.111 -0.073 3.569 -5.083 4.361 13 F_G47:C16_F F 47 ? F 16 ? 19 1 1 A G 48 1_555 A C 15 1_555 -0.460 -0.098 -0.301 -3.531 -1.461 2.977 14 F_G48:C15_F F 48 ? F 15 ? 19 1 1 A U 49 1_555 A G 12 1_555 -3.816 0.610 -0.585 17.666 -8.029 -53.128 15 F_U49:G12_F F 49 ? F 12 ? ? 1 1 A C 50 1_555 A G 11 1_555 0.364 -0.026 -0.390 21.793 -14.856 1.627 16 F_C50:G11_F F 50 ? F 11 ? 19 1 1 A C 51 1_555 A G 10 1_555 0.943 -0.186 -0.342 9.634 -7.997 5.380 17 F_C51:G10_F F 51 ? F 10 ? 19 1 1 A G 52 1_555 A A 9 1_555 6.804 -4.670 0.010 -1.038 -4.432 -11.536 18 F_G52:A9_F F 52 ? F 9 ? 11 10 1 A A 53 1_555 A U 8 1_555 -4.212 -2.347 -0.061 4.735 -11.420 -92.982 19 F_A53:U8_F F 53 ? F 8 ? 24 4 1 A G 56 1_555 A C 7 1_555 -0.576 -0.450 0.192 4.535 -8.518 2.872 20 F_G56:C7_F F 56 ? F 7 ? 19 1 1 A C 57 1_555 A G 6 1_555 0.097 -0.337 0.126 1.404 -9.900 -0.161 21 F_C57:G6_F F 57 ? F 6 ? 19 1 1 A A 58 1_555 A C 5 1_555 1.519 0.249 0.151 0.282 -10.985 14.203 22 F_A58:C5_F F 58 ? F 5 ? ? 1 1 A A 59 1_555 A U 4 1_555 0.488 -0.447 0.486 6.642 -9.546 1.598 23 F_A59:U4_F F 59 ? F 4 ? 20 1 1 A U 60 1_555 A A 3 1_555 -0.384 -0.364 0.260 9.861 -10.779 1.996 24 F_U60:A3_F F 60 ? F 3 ? 20 1 1 A C 61 1_555 A G 2 1_555 0.904 -0.531 -0.167 8.058 -14.990 -4.385 25 F_C61:G2_F F 61 ? F 2 ? 19 1 1 A C 62 1_555 A G 1 1_555 1.735 -0.714 0.877 10.239 -18.444 -3.580 26 F_C62:G1_F F 62 ? F 1 ? 19 1 1 A G 63 1_555 A U 102 1_555 -0.930 0.015 1.216 0.257 -15.954 -17.638 27 F_G63:U102_F F 63 ? F 102 ? 28 1 1 A G 64 1_555 A C 101 1_555 0.570 0.764 0.594 57.830 -15.326 31.849 28 F_G64:C101_F F 64 ? F 101 ? ? 1 1 A C 66 1_555 A G 99 1_555 0.605 4.289 0.897 -15.788 11.161 110.187 29 F_C66:G99_F F 66 ? F 99 ? ? 6 1 A U 67 1_555 A A 98 1_555 -1.978 0.222 -0.240 7.950 4.363 -13.532 30 F_U67:A98_F F 67 ? F 98 ? 20 1 1 A U 68 1_555 A G 97 1_555 1.044 -0.711 0.109 5.059 -10.518 -7.206 31 F_U68:G97_F F 68 ? F 97 ? 28 1 1 A G 69 1_555 A C 96 1_555 -0.458 -0.523 -0.140 1.507 -4.682 -6.885 32 F_G69:C96_F F 69 ? F 96 ? 19 1 1 A C 70 1_555 A G 95 1_555 1.285 -0.450 -0.754 10.520 -22.022 -22.729 33 F_C70:G95_F F 70 ? F 95 ? ? 1 1 A C 71 1_555 A G 94 1_555 0.570 -0.613 -0.574 14.484 0.392 -14.357 34 F_C71:G94_F F 71 ? F 94 ? 19 1 1 A U 73 1_555 A A 92 1_555 0.798 0.209 -0.757 18.086 -3.487 -1.826 35 F_U73:A92_F F 73 ? F 92 ? 20 1 1 A G 75 1_555 A A 90 1_555 0.352 1.887 -0.002 14.251 6.289 -23.468 36 F_G75:A90_F F 75 ? F 90 ? 8 1 1 A C 76 1_555 A G 89 1_555 0.351 0.527 -0.122 11.945 -12.568 7.202 37 F_C76:G89_F F 76 ? F 89 ? 19 1 1 A C 77 1_555 A G 88 1_555 0.799 0.018 0.116 5.293 -11.724 9.223 38 F_C77:G88_F F 77 ? F 88 ? 19 1 1 A U 78 1_555 A A 87 1_555 -0.016 -0.071 0.229 2.116 -14.748 13.974 39 F_U78:A87_F F 78 ? F 87 ? 20 1 1 A C 79 1_555 A G 86 1_555 0.729 -0.693 -0.590 4.346 0.534 -9.250 40 F_C79:G86_F F 79 ? F 86 ? 19 1 1 A U 81 1_555 A C 85 1_555 3.479 -0.836 0.784 -16.121 28.264 42.890 41 F_U81:C85_F F 81 ? F 85 ? ? ? 1 A G 54 1_555 A A 105 1_555 -3.230 -7.820 1.243 -48.300 -7.098 -156.564 42 F_G54:A105_F F 54 ? F 105 ? ? 12 1 A G 124 1_555 A C 104 1_555 -0.177 0.075 -0.527 -24.543 -17.700 1.223 43 F_G124:C104_F F 124 ? F 104 ? 19 1 1 A C 106 1_555 A G 127 1_555 0.711 -0.665 -0.284 -1.734 -7.229 -1.187 44 F_C106:G127_F F 106 ? F 127 ? 19 1 1 A G 107 1_555 A A 126 1_555 6.924 -4.307 -0.505 -0.075 0.384 -4.450 45 F_G107:A126_F F 107 ? F 126 ? 11 10 1 A G 108 1_555 A G 125 1_555 -5.786 -0.597 -0.418 -11.318 -15.174 -115.267 46 F_G108:G125_F F 108 ? F 125 ? 7 4 1 A A 109 1_555 A G 123 1_555 1.681 -5.489 -0.477 17.033 -6.371 141.442 47 F_A109:G123_F F 109 ? F 123 ? ? ? 1 A G 110 1_555 A C 122 1_555 -0.164 -0.125 -0.174 1.830 1.795 -5.769 48 F_G110:C122_F F 110 ? F 122 ? 19 1 1 A G 111 1_555 A C 121 1_555 0.022 -0.306 0.477 -2.177 -16.467 3.609 49 F_G111:C121_F F 111 ? F 121 ? 19 1 1 A G 112 1_555 A C 120 1_555 0.288 -0.139 0.331 -9.796 -9.769 -1.262 50 F_G112:C120_F F 112 ? F 120 ? 19 1 1 A A 113 1_555 A A 118 1_555 3.999 1.337 -0.044 -5.530 -12.764 -100.237 51 F_A113:A118_F F 113 ? F 118 ? 5 4 1 A U 114 1_555 A A 117 1_555 3.873 -1.614 -1.050 25.430 -13.456 -103.301 52 F_U114:A117_F F 114 ? F 117 ? 24 4 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 33 1_555 A G 28 1_555 A G 34 1_555 A C 27 1_555 0.010 -2.079 2.639 -2.657 10.904 23.268 -6.694 -0.520 1.516 25.238 6.149 25.800 1 FF_C33G34:C27G28_FF F 33 ? F 28 ? F 34 ? F 27 ? 1 A G 34 1_555 A C 27 1_555 A C 35 1_555 A G 26 1_555 0.423 -2.162 2.930 4.048 11.937 27.860 -5.945 -0.179 1.905 23.339 -7.915 30.527 2 FF_G34C35:G26C27_FF F 34 ? F 27 ? F 35 ? F 26 ? 1 A C 35 1_555 A G 26 1_555 A C 36 1_555 A G 25 1_555 -1.066 -0.231 2.806 14.835 11.582 32.892 -1.532 3.152 1.979 18.674 -23.919 37.767 3 FF_C35C36:G25G26_FF F 35 ? F 26 ? F 36 ? F 25 ? 1 A C 36 1_555 A G 25 1_555 A G 37 1_555 A C 24 1_555 1.614 -2.540 4.339 -22.081 16.478 32.559 -5.255 -4.568 1.585 24.625 32.998 42.410 4 FF_C36G37:C24G25_FF F 36 ? F 25 ? F 37 ? F 24 ? 1 A G 37 1_555 A C 24 1_555 A C 38 1_555 A G 23 1_555 -0.544 -1.605 3.131 -2.402 4.109 34.999 -3.214 0.565 2.959 6.794 3.971 35.312 5 FF_G37C38:G23C24_FF F 37 ? F 24 ? F 38 ? F 23 ? 1 A C 38 1_555 A G 23 1_555 A A 39 1_555 A U 22 1_555 -0.048 -1.327 2.914 -0.494 9.332 31.325 -3.711 0.014 2.429 16.820 0.890 32.656 6 FF_C38A39:U22G23_FF F 38 ? F 23 ? F 39 ? F 22 ? 1 A A 39 1_555 A U 22 1_555 A C 40 1_555 A G 21 1_555 0.447 -1.045 3.369 1.499 5.396 36.662 -2.374 -0.500 3.204 8.517 -2.367 37.073 7 FF_A39C40:G21U22_FF F 39 ? F 22 ? F 40 ? F 21 ? 1 A C 40 1_555 A G 21 1_555 A G 41 1_555 A C 20 1_555 -0.385 -1.745 3.222 0.515 9.309 26.754 -5.503 0.895 2.478 19.385 -1.072 28.304 8 FF_C40G41:C20G21_FF F 40 ? F 21 ? F 41 ? F 20 ? 1 A G 41 1_555 A C 20 1_555 A A 42 1_555 A U 19 1_555 -0.142 -1.401 3.198 1.731 6.770 31.961 -3.581 0.531 2.838 12.114 -3.097 32.697 9 FF_G41A42:U19C20_FF F 41 ? F 20 ? F 42 ? F 19 ? 1 A A 42 1_555 A U 19 1_555 A U 43 1_555 A G 18 1_555 0.094 -1.241 3.258 -1.464 8.486 45.979 -2.246 -0.236 2.992 10.752 1.855 46.736 10 FF_A42U43:G18U19_FF F 42 ? F 19 ? F 43 ? F 18 ? 1 A U 43 1_555 A G 18 1_555 A C 45 1_555 A G 17 1_555 -2.138 -1.642 3.202 5.116 7.120 41.391 -2.934 3.437 2.627 9.939 -7.142 42.270 11 FF_U43C45:G17G18_FF F 43 ? F 18 ? F 45 ? F 17 ? 1 A C 45 1_555 A G 17 1_555 A G 47 1_555 A C 16 1_555 -2.427 -1.403 3.578 7.649 6.546 42.539 -2.515 3.999 2.884 8.874 -10.370 43.660 12 FF_C45G47:C16G17_FF F 45 ? F 17 ? F 47 ? F 16 ? 1 A G 47 1_555 A C 16 1_555 A G 48 1_555 A C 15 1_555 -0.726 -1.816 3.373 -1.275 8.934 36.151 -3.997 0.973 2.882 14.128 2.016 37.223 13 FF_G47G48:C15C16_FF F 47 ? F 16 ? F 48 ? F 15 ? 1 A G 48 1_555 A C 15 1_555 A U 49 1_555 A G 12 1_555 2.484 -2.509 3.047 -15.306 10.346 65.570 -2.566 -2.697 2.119 9.362 13.850 67.842 14 FF_G48U49:G12C15_FF F 48 ? F 15 ? F 49 ? F 12 ? 1 A U 49 1_555 A G 12 1_555 A C 50 1_555 A G 11 1_555 2.713 -1.760 3.221 -5.821 6.066 45.934 -2.680 -3.865 2.638 7.697 7.386 46.656 15 FF_U49C50:G11G12_FF F 49 ? F 12 ? F 50 ? F 11 ? 1 A C 50 1_555 A G 11 1_555 A C 51 1_555 A G 10 1_555 -0.630 -1.828 3.645 -3.569 9.270 33.262 -4.565 0.481 3.089 15.763 6.069 34.674 16 FF_C50C51:G10G11_FF F 50 ? F 11 ? F 51 ? F 10 ? 1 A C 51 1_555 A G 10 1_555 A G 52 1_555 A A 9 1_555 -1.694 -1.206 3.686 0.948 11.475 58.959 -1.828 1.746 3.395 11.539 -0.953 59.973 17 FF_C51G52:A9G10_FF F 51 ? F 10 ? F 52 ? F 9 ? 1 A G 52 1_555 A A 9 1_555 A A 53 1_555 A U 8 1_555 -4.535 -0.242 3.262 -4.092 -4.547 -12.769 4.274 -21.370 1.561 19.077 -17.167 -14.153 18 FF_G52A53:U8A9_FF F 52 ? F 9 ? F 53 ? F 8 ? 1 A A 53 1_555 A U 8 1_555 A G 56 1_555 A C 7 1_555 2.826 -2.047 3.167 -0.883 2.645 76.583 -1.725 -2.304 3.078 2.133 0.712 76.626 19 FF_A53G56:C7U8_FF F 53 ? F 8 ? F 56 ? F 7 ? 1 A G 56 1_555 A C 7 1_555 A C 57 1_555 A G 6 1_555 -0.180 -1.664 3.363 -0.744 -0.742 39.293 -2.383 0.176 3.396 -1.103 1.106 39.307 20 FF_G56C57:G6C7_FF F 56 ? F 7 ? F 57 ? F 6 ? 1 A C 57 1_555 A G 6 1_555 A A 58 1_555 A C 5 1_555 0.010 -1.732 3.302 2.952 5.256 29.486 -4.374 0.563 2.944 10.193 -5.724 30.083 21 FF_C57A58:C5G6_FF F 57 ? F 6 ? F 58 ? F 5 ? 1 A A 58 1_555 A C 5 1_555 A A 59 1_555 A U 4 1_555 -0.259 -1.721 2.938 -0.003 3.245 26.033 -4.551 0.570 2.707 7.168 0.006 26.231 22 FF_A58A59:U4C5_FF F 58 ? F 5 ? F 59 ? F 4 ? 1 A A 59 1_555 A U 4 1_555 A U 60 1_555 A A 3 1_555 -0.117 -1.854 3.018 0.944 3.708 28.770 -4.424 0.418 2.757 7.422 -1.890 29.018 23 FF_A59U60:A3U4_FF F 59 ? F 4 ? F 60 ? F 3 ? 1 A U 60 1_555 A A 3 1_555 A C 61 1_555 A G 2 1_555 -0.477 -1.400 3.299 3.498 3.578 35.366 -2.790 1.275 3.087 5.853 -5.722 35.707 24 FF_U60C61:G2A3_FF F 60 ? F 3 ? F 61 ? F 2 ? 1 A C 61 1_555 A G 2 1_555 A C 62 1_555 A G 1 1_555 0.365 -1.897 3.172 -7.548 2.762 39.924 -3.016 -1.311 2.926 3.996 10.921 40.692 25 FF_C61C62:G1G2_FF F 61 ? F 2 ? F 62 ? F 1 ? 1 A C 62 1_555 A G 1 1_555 A G 63 1_555 A U 102 1_555 1.027 -1.905 2.614 1.732 1.333 42.318 -2.744 -1.280 2.593 1.845 -2.397 42.372 26 FF_C62G63:U102G1_FF F 62 ? F 1 ? F 63 ? F 102 ? 1 A G 63 1_555 A U 102 1_555 A G 64 1_555 A C 101 1_555 0.432 -2.211 3.601 29.776 6.793 40.108 -3.165 1.903 2.879 8.569 -37.561 50.029 27 FF_G63G64:C101U102_FF F 63 ? F 102 ? F 64 ? F 101 ? 1 A G 64 1_555 A C 101 1_555 A C 66 1_555 A G 99 1_555 3.486 5.929 2.712 132.361 -19.622 -31.378 -3.141 2.293 -1.674 12.233 82.520 -135.622 28 FF_G64C66:G99C101_FF F 64 ? F 101 ? F 66 ? F 99 ? 1 A C 66 1_555 A G 99 1_555 A U 67 1_555 A A 98 1_555 1.592 2.929 1.489 -114.015 134.104 -10.395 -1.614 0.670 -1.061 -68.431 -58.179 -176.037 29 FF_C66U67:A98G99_FF F 66 ? F 99 ? F 67 ? F 98 ? 1 A U 67 1_555 A A 98 1_555 A U 68 1_555 A G 97 1_555 1.361 -2.073 3.379 -4.834 -3.671 37.574 -2.697 -2.725 3.365 -5.654 7.445 38.044 30 FF_U67U68:G97A98_FF F 67 ? F 98 ? F 68 ? F 97 ? 1 A U 68 1_555 A G 97 1_555 A G 69 1_555 A C 96 1_555 -0.447 -1.577 3.161 2.441 13.396 30.370 -4.702 1.136 2.244 24.106 -4.392 33.218 31 FF_U68G69:C96G97_FF F 68 ? F 97 ? F 69 ? F 96 ? 1 A G 69 1_555 A C 96 1_555 A C 70 1_555 A G 95 1_555 -0.898 -1.661 3.009 0.692 8.681 38.296 -3.369 1.408 2.571 13.028 -1.039 39.237 32 FF_G69C70:G95C96_FF F 69 ? F 96 ? F 70 ? F 95 ? 1 A C 70 1_555 A G 95 1_555 A C 71 1_555 A G 94 1_555 -0.493 -2.737 3.445 4.367 17.781 23.473 -8.227 1.670 1.048 37.280 -9.156 29.690 33 FF_C70C71:G94G95_FF F 70 ? F 95 ? F 71 ? F 94 ? 1 A C 71 1_555 A G 94 1_555 A U 73 1_555 A A 92 1_555 0.677 -1.745 6.609 2.387 22.289 64.311 -3.242 -0.428 5.822 20.305 -2.175 67.708 34 FF_C71U73:A92G94_FF F 71 ? F 94 ? F 73 ? F 92 ? 1 A U 73 1_555 A A 92 1_555 A G 75 1_555 A A 90 1_555 -3.056 -0.730 6.807 -11.933 23.178 64.249 -2.491 1.754 6.660 20.917 10.769 68.808 35 FF_U73G75:A90A92_FF F 73 ? F 92 ? F 75 ? F 90 ? 1 A G 75 1_555 A A 90 1_555 A C 76 1_555 A G 89 1_555 1.209 -2.778 3.228 -3.690 14.870 29.455 -6.809 -2.600 1.528 27.062 6.716 33.123 36 FF_G75C76:G89A90_FF F 75 ? F 90 ? F 76 ? F 89 ? 1 A C 76 1_555 A G 89 1_555 A C 77 1_555 A G 88 1_555 -0.278 -1.552 3.408 -5.957 3.566 33.544 -3.213 -0.490 3.231 6.098 10.185 34.234 37 FF_C76C77:G88G89_FF F 76 ? F 89 ? F 77 ? F 88 ? 1 A C 77 1_555 A G 88 1_555 A U 78 1_555 A A 87 1_555 -0.557 -1.475 2.992 -1.252 12.406 29.033 -4.631 0.831 2.213 23.431 2.365 31.544 38 FF_C77U78:A87G88_FF F 77 ? F 88 ? F 78 ? F 87 ? 1 A U 78 1_555 A A 87 1_555 A C 79 1_555 A G 86 1_555 -0.706 -0.720 3.295 6.483 -3.155 39.155 -0.692 1.788 3.190 -4.660 -9.574 39.788 39 FF_U78C79:G86A87_FF F 78 ? F 87 ? F 79 ? F 86 ? 1 A C 79 1_555 A G 86 1_555 A U 81 1_555 A C 85 1_555 2.552 -3.157 5.818 14.884 9.798 43.952 -5.386 -0.984 5.574 12.498 -18.986 47.260 40 FF_C79U81:C85G86_FF F 79 ? F 86 ? F 81 ? F 85 ? 1 A G 54 1_555 A A 105 1_555 A G 124 1_555 A C 104 1_555 -2.465 4.415 2.137 -161.504 -36.675 -68.121 -2.092 -1.799 0.025 19.035 -83.823 -168.093 41 FF_G54G124:C104A105_FF F 54 ? F 105 ? F 124 ? F 104 ? 1 A C 106 1_555 A G 127 1_555 A G 107 1_555 A A 126 1_555 -0.957 -1.131 3.489 1.243 -0.076 56.832 -1.183 1.078 3.470 -0.080 -1.306 56.845 42 FF_C106G107:A126G127_FF F 106 ? F 127 ? F 107 ? F 126 ? 1 A G 107 1_555 A A 126 1_555 A G 108 1_555 A G 125 1_555 -5.472 -0.873 3.493 0.331 1.602 -19.258 1.727 -16.119 3.645 -4.778 0.986 -19.327 43 FF_G107G108:G125A126_FF F 107 ? F 126 ? F 108 ? F 125 ? 1 A G 108 1_555 A G 125 1_555 A A 109 1_555 A G 123 1_555 1.566 -0.517 3.391 1.317 0.922 -71.698 0.410 1.383 3.372 -0.787 1.125 -71.714 44 FF_G108A109:G123G125_FF F 108 ? F 125 ? F 109 ? F 123 ? 1 A A 109 1_555 A G 123 1_555 A G 110 1_555 A C 122 1_555 1.540 -0.089 3.197 -0.350 -1.959 132.474 -0.036 -0.844 3.196 -1.070 0.191 132.481 45 FF_A109G110:C122G123_FF F 109 ? F 123 ? F 110 ? F 122 ? 1 A G 110 1_555 A C 122 1_555 A G 111 1_555 A C 121 1_555 0.721 -2.071 3.275 -2.841 6.226 31.927 -4.694 -1.743 2.760 11.160 5.092 32.633 46 FF_G110G111:C121C122_FF F 110 ? F 122 ? F 111 ? F 121 ? 1 A G 111 1_555 A C 121 1_555 A G 112 1_555 A C 120 1_555 -0.266 -2.031 3.284 2.487 4.585 37.346 -3.717 0.723 2.999 7.117 -3.860 37.695 47 FF_G111G112:C120C121_FF F 111 ? F 121 ? F 112 ? F 120 ? 1 A G 112 1_555 A C 120 1_555 A A 113 1_555 A A 118 1_555 -3.376 -2.004 3.198 1.305 0.683 63.726 -1.927 3.251 3.116 0.647 -1.236 63.741 48 FF_G112A113:A118C120_FF F 112 ? F 120 ? F 113 ? F 118 ? 1 A A 113 1_555 A A 118 1_555 A U 114 1_555 A A 117 1_555 0.609 -0.588 2.507 5.637 -7.624 29.690 0.078 -0.266 2.642 -14.422 -10.664 31.135 49 FF_A113U114:A117A118_FF F 113 ? F 118 ? F 114 ? F 117 ? # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 K ? ? K ? ? 'SUBJECT OF INVESTIGATION' ? 2 GAI ? ? GAI ? ? 'SUBJECT OF INVESTIGATION' ? 3 MG ? ? MG ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GUANIDINE GAI 3 'PHOSPHATE ION' PO4 4 'STRONTIUM ION' SR 5 'MAGNESIUM ION' MG 6 'POTASSIUM ION' K 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5T83 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support SAXS _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 32 2 1' _space_group.name_Hall ;P 32 2" ; _space_group.IT_number 154 _space_group.crystal_system trigonal _space_group.id 1 #