HEADER TRANSPORT PROTEIN 01-MAY-21 7MNS TITLE CRYSTAL STRUCTURE OF THE ZNF4 OF NUCLEOPORIN NUP358/RANBP2 IN COMPLEX TITLE 2 WITH RAN-GDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTP-BINDING NUCLEAR PROTEIN RAN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ANDROGEN RECEPTOR-ASSOCIATED PROTEIN 24,GTPASE RAN,RAS-LIKE COMPND 5 PROTEIN TC4,RAS-RELATED NUCLEAR PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: E3 SUMO-PROTEIN LIGASE RANBP2; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: 358 KDA NUCLEOPORIN,NUCLEAR PORE COMPLEX PROTEIN NUP358, COMPND 12 NUCLEOPORIN NUP358,RAN-BINDING PROTEIN 2,RANBP2,P270; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAN, ARA24, OK/SW-CL.81; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: RANBP2, NUP358; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEAR PORE COMPLEX COMPONENT, NUCLEOCYTOPLASMIC TRANSPORT, KEYWDS 2 TRANSPORT PROTEIN, ZINC FINGER EXPDTA X-RAY DIFFRACTION AUTHOR C.J.BLEY,S.NIE,G.W.MOBBS,S.PETROVIC,A.T.GRES,X.LIU,S.MUKHERJEE, AUTHOR 2 S.HARVEY,F.M.HUBER,D.H.LIN,B.BROWN,A.W.TANG,E.J.RUNDLET,A.R.CORREIA, AUTHOR 3 S.CHEN,S.G.REGMI,T.A.STEVENS,C.A.JETTE,M.DASSO,A.PATKE,A.F.PALAZZO, AUTHOR 4 A.A.KOSSIAKOFF,A.HOELZ REVDAT 2 22-JUN-22 7MNS 1 JRNL REVDAT 1 15-JUN-22 7MNS 0 JRNL AUTH C.J.BLEY,S.NIE,G.W.MOBBS,S.PETROVIC,A.T.GRES,X.LIU, JRNL AUTH 2 S.MUKHERJEE,S.HARVEY,F.M.HUBER,D.H.LIN,B.BROWN,A.W.TANG, JRNL AUTH 3 E.J.RUNDLET,A.R.CORREIA,S.CHEN,S.G.REGMI,T.A.STEVENS, JRNL AUTH 4 C.A.JETTE,M.DASSO,A.PATKE,A.F.PALAZZO,A.A.KOSSIAKOFF,A.HOELZ JRNL TITL ARCHITECTURE OF THE CYTOPLASMIC FACE OF THE NUCLEAR PORE. JRNL REF SCIENCE V. 376 M9129 2022 JRNL REFN ESSN 1095-9203 JRNL PMID 35679405 JRNL DOI 10.1126/SCIENCE.ABM9129 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 29526 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1477 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9100 - 4.6700 1.00 2792 138 0.1954 0.2061 REMARK 3 2 4.6700 - 3.7100 1.00 2614 137 0.1465 0.1579 REMARK 3 3 3.7100 - 3.2400 1.00 2558 156 0.1629 0.2147 REMARK 3 4 3.2400 - 2.9400 1.00 2555 134 0.1731 0.2231 REMARK 3 5 2.9400 - 2.7300 1.00 2511 142 0.1709 0.1990 REMARK 3 6 2.7300 - 2.5700 1.00 2528 114 0.1697 0.2120 REMARK 3 7 2.5700 - 2.4400 1.00 2524 128 0.1736 0.2099 REMARK 3 8 2.4400 - 2.3400 1.00 2516 125 0.1877 0.2232 REMARK 3 9 2.3400 - 2.2500 1.00 2513 110 0.1833 0.2304 REMARK 3 10 2.2500 - 2.1700 1.00 2477 152 0.2052 0.2122 REMARK 3 11 2.1700 - 2.1000 1.00 2461 141 0.2467 0.2681 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.46 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 29 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.3874 43.3279 100.3596 REMARK 3 T TENSOR REMARK 3 T11: 0.2536 T22: 0.3287 REMARK 3 T33: 0.3194 T12: 0.0127 REMARK 3 T13: 0.0379 T23: -0.0375 REMARK 3 L TENSOR REMARK 3 L11: 2.3091 L22: 2.8694 REMARK 3 L33: 0.5914 L12: -0.2874 REMARK 3 L13: 0.3219 L23: -0.2582 REMARK 3 S TENSOR REMARK 3 S11: -0.0409 S12: 0.1225 S13: 0.0683 REMARK 3 S21: 0.0713 S22: -0.0691 S23: -0.0122 REMARK 3 S31: -0.0694 S32: -0.1821 S33: 0.1055 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 30 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9607 43.6163 101.0801 REMARK 3 T TENSOR REMARK 3 T11: 0.2692 T22: 0.3405 REMARK 3 T33: 0.3118 T12: -0.0009 REMARK 3 T13: 0.0275 T23: -0.0380 REMARK 3 L TENSOR REMARK 3 L11: 2.9254 L22: 2.0634 REMARK 3 L33: 0.8464 L12: -0.1818 REMARK 3 L13: 0.1023 L23: -0.7100 REMARK 3 S TENSOR REMARK 3 S11: 0.1018 S12: 0.2171 S13: -0.2275 REMARK 3 S21: -0.0666 S22: -0.0074 S23: 0.1223 REMARK 3 S31: 0.1401 S32: -0.0567 S33: -0.0621 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.6680 50.8811 92.3819 REMARK 3 T TENSOR REMARK 3 T11: 0.4018 T22: 0.3684 REMARK 3 T33: 0.3354 T12: 0.0313 REMARK 3 T13: 0.0662 T23: 0.0295 REMARK 3 L TENSOR REMARK 3 L11: 3.1288 L22: 1.4858 REMARK 3 L33: 3.0016 L12: -1.0990 REMARK 3 L13: -2.2276 L23: 1.9555 REMARK 3 S TENSOR REMARK 3 S11: 0.2689 S12: 0.3226 S13: 0.3079 REMARK 3 S21: -0.3233 S22: -0.1768 S23: -0.2646 REMARK 3 S31: -0.5099 S32: -0.1972 S33: -0.0985 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 124 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.7403 40.8994 89.4943 REMARK 3 T TENSOR REMARK 3 T11: 0.3242 T22: 0.5645 REMARK 3 T33: 0.4816 T12: 0.0481 REMARK 3 T13: 0.1015 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 4.7154 L22: 6.7890 REMARK 3 L33: 4.2681 L12: 3.1133 REMARK 3 L13: 0.5582 L23: -1.7518 REMARK 3 S TENSOR REMARK 3 S11: 0.0628 S12: 0.2276 S13: -0.1291 REMARK 3 S21: -0.3247 S22: -0.3872 S23: -0.8548 REMARK 3 S31: -0.1073 S32: 0.6383 S33: 0.2238 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.4747 43.7168 100.3943 REMARK 3 T TENSOR REMARK 3 T11: 0.2347 T22: 0.3639 REMARK 3 T33: 0.3822 T12: -0.0257 REMARK 3 T13: 0.0274 T23: -0.0328 REMARK 3 L TENSOR REMARK 3 L11: 3.7409 L22: 2.5060 REMARK 3 L33: 4.1044 L12: -0.1770 REMARK 3 L13: -0.1402 L23: -0.2577 REMARK 3 S TENSOR REMARK 3 S11: 0.0098 S12: -0.1284 S13: 0.1806 REMARK 3 S21: 0.0948 S22: -0.0857 S23: -0.4415 REMARK 3 S31: -0.1251 S32: 0.2693 S33: 0.0751 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.3657 51.0513 108.1543 REMARK 3 T TENSOR REMARK 3 T11: 0.2712 T22: 0.3344 REMARK 3 T33: 0.3742 T12: -0.1009 REMARK 3 T13: 0.0157 T23: -0.0221 REMARK 3 L TENSOR REMARK 3 L11: 9.3357 L22: 3.2163 REMARK 3 L33: 7.6009 L12: -3.1331 REMARK 3 L13: 0.2159 L23: 3.4785 REMARK 3 S TENSOR REMARK 3 S11: -0.3368 S12: -0.2809 S13: -0.4520 REMARK 3 S21: -0.0203 S22: 0.0524 S23: -0.3807 REMARK 3 S31: -0.6666 S32: 0.6283 S33: 0.3212 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 169 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.7550 37.5927 104.7193 REMARK 3 T TENSOR REMARK 3 T11: 0.2785 T22: 0.3324 REMARK 3 T33: 0.3701 T12: -0.0399 REMARK 3 T13: 0.0079 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 1.6910 L22: 0.8150 REMARK 3 L33: 1.5618 L12: -1.2174 REMARK 3 L13: -0.9483 L23: 0.4047 REMARK 3 S TENSOR REMARK 3 S11: 0.0201 S12: -0.1484 S13: -0.1172 REMARK 3 S21: 0.1642 S22: 0.0222 S23: -0.2952 REMARK 3 S31: 0.0497 S32: 0.3968 S33: -0.0211 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 202 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.0308 49.3581 97.7891 REMARK 3 T TENSOR REMARK 3 T11: 0.8036 T22: 0.6781 REMARK 3 T33: 1.4796 T12: -0.0335 REMARK 3 T13: -0.2657 T23: -0.1063 REMARK 3 L TENSOR REMARK 3 L11: 7.1420 L22: 4.2391 REMARK 3 L33: 3.0697 L12: -5.3660 REMARK 3 L13: 2.2645 L23: -0.9934 REMARK 3 S TENSOR REMARK 3 S11: -0.6952 S12: -0.1961 S13: 1.1178 REMARK 3 S21: 0.4990 S22: 0.1337 S23: -0.7288 REMARK 3 S31: -1.1495 S32: 0.4417 S33: 0.3108 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1534 THROUGH 1537 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.1334 54.2599 121.3688 REMARK 3 T TENSOR REMARK 3 T11: 1.3058 T22: 0.8581 REMARK 3 T33: 0.9106 T12: 0.0945 REMARK 3 T13: -0.0635 T23: -0.0452 REMARK 3 L TENSOR REMARK 3 L11: 9.2584 L22: 4.8927 REMARK 3 L33: 3.5499 L12: 3.2129 REMARK 3 L13: 1.8278 L23: 4.1056 REMARK 3 S TENSOR REMARK 3 S11: -0.7844 S12: -0.0279 S13: 1.6607 REMARK 3 S21: 0.0793 S22: -0.5926 S23: -0.1936 REMARK 3 S31: -1.2133 S32: 0.3383 S33: 1.1339 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1538 THROUGH 1541 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0252 58.4603 116.4315 REMARK 3 T TENSOR REMARK 3 T11: 0.7507 T22: 0.9224 REMARK 3 T33: 1.8940 T12: 0.0509 REMARK 3 T13: 0.1136 T23: -0.2553 REMARK 3 L TENSOR REMARK 3 L11: 5.4529 L22: 2.7235 REMARK 3 L33: 3.6506 L12: -3.5500 REMARK 3 L13: -4.3868 L23: 2.6411 REMARK 3 S TENSOR REMARK 3 S11: 0.1523 S12: -1.8265 S13: 0.5633 REMARK 3 S21: 0.5737 S22: -0.7036 S23: -0.6193 REMARK 3 S31: -1.0271 S32: 0.4675 S33: 0.2568 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1542 THROUGH 1545 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.2443 61.5798 115.7784 REMARK 3 T TENSOR REMARK 3 T11: 0.6066 T22: 0.6239 REMARK 3 T33: 0.6008 T12: 0.0946 REMARK 3 T13: -0.0061 T23: -0.1821 REMARK 3 L TENSOR REMARK 3 L11: 3.9608 L22: 4.4022 REMARK 3 L33: 8.7197 L12: -2.2221 REMARK 3 L13: 1.8358 L23: 3.6934 REMARK 3 S TENSOR REMARK 3 S11: 0.5561 S12: 0.2408 S13: -0.2719 REMARK 3 S21: -0.0854 S22: 0.4719 S23: -1.5736 REMARK 3 S31: 0.0666 S32: 0.8929 S33: -0.9386 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1546 THROUGH 1566 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.6535 56.6430 106.1212 REMARK 3 T TENSOR REMARK 3 T11: 0.4028 T22: 0.3731 REMARK 3 T33: 0.3652 T12: 0.0472 REMARK 3 T13: 0.0570 T23: -0.0226 REMARK 3 L TENSOR REMARK 3 L11: 2.1609 L22: 3.7182 REMARK 3 L33: 2.8279 L12: -0.8894 REMARK 3 L13: -0.1982 L23: 0.9750 REMARK 3 S TENSOR REMARK 3 S11: -0.0711 S12: -0.1063 S13: 0.2224 REMARK 3 S21: 0.3202 S22: 0.0797 S23: 0.1346 REMARK 3 S31: -0.5319 S32: 0.0556 S33: -0.0295 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1567 THROUGH 1571 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7164 52.8300 103.7315 REMARK 3 T TENSOR REMARK 3 T11: 0.4738 T22: 0.4144 REMARK 3 T33: 0.5051 T12: -0.0479 REMARK 3 T13: 0.0504 T23: -0.0584 REMARK 3 L TENSOR REMARK 3 L11: 4.4627 L22: 5.7033 REMARK 3 L33: 4.3279 L12: 1.1067 REMARK 3 L13: 2.9686 L23: 4.3073 REMARK 3 S TENSOR REMARK 3 S11: 0.3911 S12: -0.9888 S13: 0.5311 REMARK 3 S21: 0.7422 S22: -0.6127 S23: 1.1252 REMARK 3 S31: 0.5147 S32: -0.3720 S33: 0.3805 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7MNS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1000256558. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.28210 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29596 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 29.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 25.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 25.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18 % (W/V) PEG 3,350; 0.1M BIS-TRIS, REMARK 280 PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 129.85333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 64.92667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 97.39000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.46333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 162.31667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 129.85333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 64.92667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 32.46333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 97.39000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 162.31667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 533 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 GLN A 4 REMARK 465 GLY A 5 REMARK 465 GLU A 6 REMARK 465 LEU A 209 REMARK 465 PRO A 210 REMARK 465 ASP A 211 REMARK 465 GLU A 212 REMARK 465 ASP A 213 REMARK 465 ASP A 214 REMARK 465 ASP A 215 REMARK 465 LEU A 216 REMARK 465 GLY B 1529 REMARK 465 PRO B 1530 REMARK 465 LEU B 1531 REMARK 465 GLY B 1532 REMARK 465 SER B 1533 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 113 -130.64 64.76 REMARK 500 LYS A 123 32.18 73.14 REMARK 500 ASP B1538 49.53 -82.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 24 OG1 REMARK 620 2 GDP A 301 O2B 88.1 REMARK 620 3 HOH A 412 O 87.9 175.8 REMARK 620 4 HOH A 413 O 175.7 90.0 94.1 REMARK 620 5 HOH A 435 O 90.8 86.3 92.6 92.9 REMARK 620 6 HOH A 449 O 84.2 89.7 91.1 91.9 173.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B1549 SG REMARK 620 2 CYS B1552 SG 115.5 REMARK 620 3 CYS B1563 SG 107.2 104.5 REMARK 620 4 CYS B1566 SG 100.5 118.4 110.3 REMARK 620 N 1 2 3 DBREF 7MNS A 1 216 UNP P62826 RAN_HUMAN 1 216 DBREF 7MNS B 1535 1571 UNP P49792 RBP2_HUMAN 1535 1571 SEQADV 7MNS MET A -19 UNP P62826 EXPRESSION TAG SEQADV 7MNS GLY A -18 UNP P62826 EXPRESSION TAG SEQADV 7MNS SER A -17 UNP P62826 EXPRESSION TAG SEQADV 7MNS SER A -16 UNP P62826 EXPRESSION TAG SEQADV 7MNS HIS A -15 UNP P62826 EXPRESSION TAG SEQADV 7MNS HIS A -14 UNP P62826 EXPRESSION TAG SEQADV 7MNS HIS A -13 UNP P62826 EXPRESSION TAG SEQADV 7MNS HIS A -12 UNP P62826 EXPRESSION TAG SEQADV 7MNS HIS A -11 UNP P62826 EXPRESSION TAG SEQADV 7MNS HIS A -10 UNP P62826 EXPRESSION TAG SEQADV 7MNS SER A -9 UNP P62826 EXPRESSION TAG SEQADV 7MNS SER A -8 UNP P62826 EXPRESSION TAG SEQADV 7MNS GLY A -7 UNP P62826 EXPRESSION TAG SEQADV 7MNS LEU A -6 UNP P62826 EXPRESSION TAG SEQADV 7MNS VAL A -5 UNP P62826 EXPRESSION TAG SEQADV 7MNS PRO A -4 UNP P62826 EXPRESSION TAG SEQADV 7MNS ARG A -3 UNP P62826 EXPRESSION TAG SEQADV 7MNS GLY A -2 UNP P62826 EXPRESSION TAG SEQADV 7MNS SER A -1 UNP P62826 EXPRESSION TAG SEQADV 7MNS HIS A 0 UNP P62826 EXPRESSION TAG SEQADV 7MNS SER A 35 UNP P62826 PHE 35 ENGINEERED MUTATION SEQADV 7MNS GLY B 1529 UNP P49792 EXPRESSION TAG SEQADV 7MNS PRO B 1530 UNP P49792 EXPRESSION TAG SEQADV 7MNS LEU B 1531 UNP P49792 EXPRESSION TAG SEQADV 7MNS GLY B 1532 UNP P49792 EXPRESSION TAG SEQADV 7MNS SER B 1533 UNP P49792 EXPRESSION TAG SEQADV 7MNS MET B 1534 UNP P49792 EXPRESSION TAG SEQRES 1 A 236 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 236 LEU VAL PRO ARG GLY SER HIS MET ALA ALA GLN GLY GLU SEQRES 3 A 236 PRO GLN VAL GLN PHE LYS LEU VAL LEU VAL GLY ASP GLY SEQRES 4 A 236 GLY THR GLY LYS THR THR PHE VAL LYS ARG HIS LEU THR SEQRES 5 A 236 GLY GLU SER GLU LYS LYS TYR VAL ALA THR LEU GLY VAL SEQRES 6 A 236 GLU VAL HIS PRO LEU VAL PHE HIS THR ASN ARG GLY PRO SEQRES 7 A 236 ILE LYS PHE ASN VAL TRP ASP THR ALA GLY GLN GLU LYS SEQRES 8 A 236 PHE GLY GLY LEU ARG ASP GLY TYR TYR ILE GLN ALA GLN SEQRES 9 A 236 CYS ALA ILE ILE MET PHE ASP VAL THR SER ARG VAL THR SEQRES 10 A 236 TYR LYS ASN VAL PRO ASN TRP HIS ARG ASP LEU VAL ARG SEQRES 11 A 236 VAL CYS GLU ASN ILE PRO ILE VAL LEU CYS GLY ASN LYS SEQRES 12 A 236 VAL ASP ILE LYS ASP ARG LYS VAL LYS ALA LYS SER ILE SEQRES 13 A 236 VAL PHE HIS ARG LYS LYS ASN LEU GLN TYR TYR ASP ILE SEQRES 14 A 236 SER ALA LYS SER ASN TYR ASN PHE GLU LYS PRO PHE LEU SEQRES 15 A 236 TRP LEU ALA ARG LYS LEU ILE GLY ASP PRO ASN LEU GLU SEQRES 16 A 236 PHE VAL ALA MET PRO ALA LEU ALA PRO PRO GLU VAL VAL SEQRES 17 A 236 MET ASP PRO ALA LEU ALA ALA GLN TYR GLU HIS ASP LEU SEQRES 18 A 236 GLU VAL ALA GLN THR THR ALA LEU PRO ASP GLU ASP ASP SEQRES 19 A 236 ASP LEU SEQRES 1 B 43 GLY PRO LEU GLY SER MET GLY PHE GLU ASP MET PHE ALA SEQRES 2 B 43 LYS LYS GLU GLY GLN TRP ASP CYS SER SER CYS LEU VAL SEQRES 3 B 43 ARG ASN GLU ALA ASN ALA THR ARG CYS VAL ALA CYS GLN SEQRES 4 B 43 ASN PRO ASP LYS HET GDP A 301 40 HET MG A 302 1 HET ZN B1601 1 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM ZN ZINC ION FORMUL 3 GDP C10 H15 N5 O11 P2 FORMUL 4 MG MG 2+ FORMUL 5 ZN ZN 2+ FORMUL 6 HOH *159(H2 O) HELIX 1 AA1 GLY A 22 LYS A 28 1 7 HELIX 2 AA2 HIS A 30 GLU A 36 1 7 HELIX 3 AA3 ARG A 76 TYR A 80 5 5 HELIX 4 AA4 SER A 94 ASN A 100 1 7 HELIX 5 AA5 ASN A 100 GLU A 113 1 14 HELIX 6 AA6 LYS A 132 ILE A 136 5 5 HELIX 7 AA7 SER A 150 ASN A 154 5 5 HELIX 8 AA8 GLU A 158 GLY A 170 1 13 HELIX 9 AA9 ASP A 190 THR A 207 1 18 SHEET 1 AA1 7 LYS A 38 VAL A 40 0 SHEET 2 AA1 7 VAL A 45 THR A 54 -1 O VAL A 45 N VAL A 40 SHEET 3 AA1 7 GLY A 57 THR A 66 -1 O PHE A 61 N LEU A 50 SHEET 4 AA1 7 VAL A 9 GLY A 17 1 N LEU A 13 O TRP A 64 SHEET 5 AA1 7 CYS A 85 ASP A 91 1 O MET A 89 N VAL A 16 SHEET 6 AA1 7 ILE A 117 ASN A 122 1 O ASN A 122 N PHE A 90 SHEET 7 AA1 7 LEU A 144 ASP A 148 1 O GLN A 145 N LEU A 119 SHEET 1 AA2 2 TRP B1547 ASP B1548 0 SHEET 2 AA2 2 ARG B1555 ASN B1556 -1 O ASN B1556 N TRP B1547 LINK OG1 THR A 24 MG MG A 302 1555 1555 2.11 LINK O2B GDP A 301 MG MG A 302 1555 1555 2.13 LINK MG MG A 302 O HOH A 412 1555 1555 2.13 LINK MG MG A 302 O HOH A 413 1555 1555 2.10 LINK MG MG A 302 O HOH A 435 1555 1555 2.07 LINK MG MG A 302 O HOH A 449 1555 1555 2.02 LINK SG CYS B1549 ZN ZN B1601 1555 1555 2.39 LINK SG CYS B1552 ZN ZN B1601 1555 1555 2.33 LINK SG CYS B1563 ZN ZN B1601 1555 1555 2.33 LINK SG CYS B1566 ZN ZN B1601 1555 1555 2.30 CRYST1 92.480 92.480 194.780 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010813 0.006243 0.000000 0.00000 SCALE2 0.000000 0.012486 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005134 0.00000