HEADER VIRAL PROTEIN 24-MAY-21 7MZH TITLE SARS-COV-2 RECEPTOR BINDING DOMAIN BOUND TO FAB WCSL 119 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: E, A; COMPND 4 FRAGMENT: RECEPTOR BINDING DOMAIN (RBD); COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: WCSL 119 HEAVY CHAIN; COMPND 8 CHAIN: H, B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: WCSL 119 LIGHT CHAIN; COMPND 12 CHAIN: L, C; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV, SARS-COV-2; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: S, 2; SOURCE 7 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 8 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 22 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SARS-COV-2, SPIKE, RBD, HUMAN ANTIBODY, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.PYMM,L.L.TAN,M.H.DIETRICH,L.J.CHAN,W.H.THAM REVDAT 4 18-OCT-23 7MZH 1 REMARK REVDAT 3 27-OCT-21 7MZH 1 JRNL REVDAT 2 20-OCT-21 7MZH 1 JRNL REVDAT 1 06-OCT-21 7MZH 0 JRNL AUTH A.K.WHEATLEY,P.PYMM,R.ESTERBAUER,M.H.DIETRICH,W.S.LEE, JRNL AUTH 2 D.DREW,H.G.KELLY,L.J.CHAN,F.L.MORDANT,K.A.BLACK,A.ADAIR, JRNL AUTH 3 H.X.TAN,J.A.JUNO,K.M.WRAGG,T.AMARASENA,E.LOPEZ,K.J.SELVA, JRNL AUTH 4 E.R.HAYCROFT,J.P.COONEY,H.VENUGOPAL,L.L.TAN,M.T.O NEILL, JRNL AUTH 5 C.C.ALLISON,D.CROMER,M.P.DAVENPORT,R.A.BOWEN,A.W.CHUNG, JRNL AUTH 6 M.PELLEGRINI,M.T.LIDDAMENT,A.GLUKHOVA,K.SUBBARAO,S.J.KENT, JRNL AUTH 7 W.H.THAM JRNL TITL LANDSCAPE OF HUMAN ANTIBODY RECOGNITION OF THE SARS-COV-2 JRNL TITL 2 RECEPTOR BINDING DOMAIN. JRNL REF CELL REP V. 37 09822 2021 JRNL REFN ESSN 2211-1247 JRNL PMID 34610292 JRNL DOI 10.1016/J.CELREP.2021.109822 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15_3459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 81788 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 3922 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.7010 - 6.3713 0.99 2884 153 0.1634 0.1648 REMARK 3 2 6.3713 - 5.0592 1.00 2844 129 0.1749 0.1925 REMARK 3 3 5.0592 - 4.4203 1.00 2812 135 0.1579 0.1940 REMARK 3 4 4.4203 - 4.0164 1.00 2767 173 0.1696 0.2447 REMARK 3 5 4.0164 - 3.7286 1.00 2775 144 0.2015 0.2452 REMARK 3 6 3.7286 - 3.5089 1.00 2826 136 0.2243 0.2901 REMARK 3 7 3.5089 - 3.3332 1.00 2753 147 0.2368 0.3244 REMARK 3 8 3.3332 - 3.1882 1.00 2794 147 0.2365 0.2373 REMARK 3 9 3.1882 - 3.0655 1.00 2793 138 0.2400 0.2805 REMARK 3 10 3.0655 - 2.9597 1.00 2778 131 0.2401 0.2780 REMARK 3 11 2.9597 - 2.8672 1.00 2805 137 0.2493 0.3306 REMARK 3 12 2.8672 - 2.7852 0.99 2772 123 0.2555 0.3104 REMARK 3 13 2.7852 - 2.7119 1.00 2761 135 0.2498 0.3464 REMARK 3 14 2.7119 - 2.6457 1.00 2755 163 0.2470 0.2704 REMARK 3 15 2.6457 - 2.5856 0.99 2776 131 0.2489 0.3554 REMARK 3 16 2.5856 - 2.5306 1.00 2773 120 0.2632 0.3442 REMARK 3 17 2.5306 - 2.4800 1.00 2753 141 0.2560 0.3162 REMARK 3 18 2.4800 - 2.4332 1.00 2806 144 0.2608 0.3109 REMARK 3 19 2.4332 - 2.3897 1.00 2803 110 0.2684 0.2746 REMARK 3 20 2.3897 - 2.3492 1.00 2718 168 0.2785 0.3270 REMARK 3 21 2.3492 - 2.3113 1.00 2797 101 0.2948 0.3151 REMARK 3 22 2.3113 - 2.2758 1.00 2747 134 0.2853 0.3354 REMARK 3 23 2.2758 - 2.2423 1.00 2779 159 0.3045 0.3491 REMARK 3 24 2.2423 - 2.2107 1.00 2721 148 0.3159 0.3676 REMARK 3 25 2.2107 - 2.1808 1.00 2773 126 0.3215 0.3870 REMARK 3 26 2.1808 - 2.1525 1.00 2784 151 0.3336 0.3828 REMARK 3 27 2.1525 - 2.1256 1.00 2743 148 0.3434 0.3770 REMARK 3 28 2.1256 - 2.1000 1.00 2774 150 0.3484 0.4541 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 3 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 333 THROUGH 345 OR REMARK 3 (RESID 346 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 347 REMARK 3 THROUGH 356 OR (RESID 357 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 358 THROUGH 407 OR (RESID 408 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB OR NAME CG OR NAME CD )) OR REMARK 3 RESID 409 THROUGH 457 OR (RESID 458 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 459 THROUGH 480 OR REMARK 3 (RESID 481 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 482 REMARK 3 THROUGH 535)) REMARK 3 SELECTION : (CHAIN E AND (RESID 333 THROUGH 334 OR REMARK 3 (RESID 335 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 336 REMARK 3 THROUGH 361 OR (RESID 362 THROUGH 363 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 364 THROUGH 416 OR REMARK 3 (RESID 417 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 418 REMARK 3 THROUGH 518 OR (RESID 519 THROUGH 520 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 521 THROUGH 535)) REMARK 3 ATOM PAIRS NUMBER : 1232 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN B AND (RESID 1 THROUGH 122 OR REMARK 3 (RESID 123 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 124 REMARK 3 THROUGH 125 OR (RESID 126 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 127 OR RESID 130 THROUGH 135 OR REMARK 3 RESID 137 THROUGH 172 OR RESID 174 REMARK 3 THROUGH 176 OR RESID 178 THROUGH 191 OR REMARK 3 RESID 193 THROUGH 201 OR (RESID 202 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 203 THROUGH 210 OR REMARK 3 (RESID 211 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )))) REMARK 3 SELECTION : (CHAIN H AND ((RESID 1 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 2 THROUGH 60 OR (RESID 61 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 62 THROUGH 135 OR REMARK 3 RESID 137 THROUGH 172 OR RESID 174 REMARK 3 THROUGH 176 OR RESID 178 THROUGH 191 OR REMARK 3 RESID 193 THROUGH 196 OR (RESID 197 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 198 THROUGH 199 OR REMARK 3 (RESID 200 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 201 REMARK 3 THROUGH 211)) REMARK 3 ATOM PAIRS NUMBER : 1238 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN C AND (RESID 2 THROUGH 126 OR REMARK 3 RESID 128 THROUGH 192 OR (RESID 193 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 194 THROUGH 213 OR REMARK 3 (RESID 214 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 215)) REMARK 3 SELECTION : (CHAIN L AND (RESID 2 THROUGH 42 OR REMARK 3 (RESID 43 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB OR NAME CG )) OR REMARK 3 RESID 44 THROUGH 126 OR RESID 128 THROUGH REMARK 3 169 OR (RESID 170 AND (NAME N OR NAME CA REMARK 3 OR NAME C OR NAME O OR NAME CB OR NAME CG REMARK 3 )) OR RESID 171 THROUGH 215)) REMARK 3 ATOM PAIRS NUMBER : 1272 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7MZH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1000257069. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JAN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95373 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81929 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 46.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.82000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6W41 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG3350, 0.2 M POTASSIUM REMARK 280 THIOCYANATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.41650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, H, L, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN E 331 REMARK 465 ILE E 332 REMARK 465 HIS E 530 REMARK 465 HIS E 531 REMARK 465 HIS E 532 REMARK 465 HIS E 533 REMARK 465 HIS E 534 REMARK 465 HIS E 535 REMARK 465 SER H 133 REMARK 465 GLY H 134 REMARK 465 ASP H 218 REMARK 465 LYS H 219 REMARK 465 THR H 220 REMARK 465 HIS H 221 REMARK 465 GLN L 1 REMARK 465 SER L 216 REMARK 465 ASN A 331 REMARK 465 HIS A 530 REMARK 465 HIS A 531 REMARK 465 HIS A 532 REMARK 465 HIS A 533 REMARK 465 HIS A 534 REMARK 465 HIS A 535 REMARK 465 CYS B 217 REMARK 465 ASP B 218 REMARK 465 LYS B 219 REMARK 465 THR B 220 REMARK 465 HIS B 221 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG E 346 CG CD NE CZ NH1 NH2 REMARK 470 ARG E 357 CG CD NE CZ NH1 NH2 REMARK 470 ARG E 408 NE CZ NH1 NH2 REMARK 470 LYS E 444 CG CD CE NZ REMARK 470 LYS E 458 CG CD CE NZ REMARK 470 GLU E 471 CG CD OE1 OE2 REMARK 470 ASN E 481 CG OD1 ND2 REMARK 470 GLU H 1 CD OE1 OE2 REMARK 470 SER H 128 OG REMARK 470 LYS H 130 CG CD CE NZ REMARK 470 SER H 131 OG REMARK 470 LYS H 207 CG CD CE NZ REMARK 470 LYS H 215 CG CD CE NZ REMARK 470 SER H 216 OG REMARK 470 ASN L 116 CG OD1 ND2 REMARK 470 LYS L 160 CG CD CE NZ REMARK 470 ARG L 193 CG CD NE CZ NH1 NH2 REMARK 470 GLU L 214 CG CD OE1 OE2 REMARK 470 ILE A 332 CG1 CG2 CD1 REMARK 470 LEU A 335 CG CD1 CD2 REMARK 470 VAL A 362 CG1 CG2 REMARK 470 LYS A 417 CG CD CE NZ REMARK 470 LYS A 444 CG CD CE NZ REMARK 470 GLU A 471 CG CD OE1 OE2 REMARK 470 HIS A 519 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 1 CG CD OE1 OE2 REMARK 470 GLN B 62 CG CD OE1 NE2 REMARK 470 LYS B 130 CG CD CE NZ REMARK 470 LYS B 202 CG CD CE NZ REMARK 470 ASN B 205 CG OD1 ND2 REMARK 470 LYS B 215 CG CD CE NZ REMARK 470 GLN C 1 CG CD OE1 NE2 REMARK 470 LYS C 43 CD CE NZ REMARK 470 ASN C 116 CG OD1 ND2 REMARK 470 LYS C 160 CG CD CE NZ REMARK 470 LYS C 170 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER C 169 O HOH C 301 1.95 REMARK 500 NZ LYS H 144 OE2 GLU L 128 1.98 REMARK 500 O HOH B 356 O HOH C 340 1.99 REMARK 500 O LYS C 160 O HOH C 302 2.02 REMARK 500 OD1 ASN H 205 O HOH H 301 2.05 REMARK 500 O HOH B 345 O HOH B 353 2.11 REMARK 500 OE1 GLN E 493 O HOH E 601 2.11 REMARK 500 O HOH A 626 O HOH A 629 2.18 REMARK 500 O HOH C 301 O HOH C 319 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH E 621 O HOH H 330 2545 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER B 114 CB SER B 114 OG 0.098 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU E 455 CA - CB - CG ANGL. DEV. = 16.6 DEGREES REMARK 500 CYS A 525 CA - CB - SG ANGL. DEV. = 7.1 DEGREES REMARK 500 LYS C 190 CB - CG - CD ANGL. DEV. = 17.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA E 352 51.38 -104.06 REMARK 500 PHE E 377 77.18 -158.71 REMARK 500 ASP E 428 33.35 -95.90 REMARK 500 ALA H 16 -169.68 -75.10 REMARK 500 GLN H 43 -168.35 -121.48 REMARK 500 SER H 99 -135.77 50.28 REMARK 500 SER H 131 -76.44 -91.14 REMARK 500 ASP H 145 65.76 60.53 REMARK 500 THR H 192 -52.16 -137.41 REMARK 500 ASN L 28 -86.15 -111.37 REMARK 500 ASP L 52 -56.17 75.33 REMARK 500 LEU L 110 106.46 -59.42 REMARK 500 ASP L 155 -111.80 54.13 REMARK 500 ALA A 352 51.37 -105.19 REMARK 500 PHE A 377 81.54 -155.69 REMARK 500 ASP A 428 35.56 -98.32 REMARK 500 GLN B 43 -165.30 -121.78 REMARK 500 SER B 99 -134.45 53.18 REMARK 500 ASP B 145 65.36 61.76 REMARK 500 THR B 192 -51.72 -129.93 REMARK 500 ASN C 28 -88.71 -114.52 REMARK 500 ASP C 52 -56.72 74.28 REMARK 500 LEU C 110 105.32 -59.31 REMARK 500 ASP C 155 -116.25 59.14 REMARK 500 ASN C 174 -0.24 76.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER B 114 ALA B 115 -137.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7MZF RELATED DB: PDB REMARK 900 RELATED ID: 7MZG RELATED DB: PDB DBREF 7MZH E 331 527 UNP P0DTC2 SPIKE_SARS2 331 527 DBREF 7MZH H 1 221 PDB 7MZH 7MZH 1 221 DBREF 7MZH L 1 216 PDB 7MZH 7MZH 1 216 DBREF 7MZH A 331 527 UNP P0DTC2 SPIKE_SARS2 331 527 DBREF 7MZH B 1 221 PDB 7MZH 7MZH 1 221 DBREF 7MZH C 1 216 PDB 7MZH 7MZH 1 216 SEQADV 7MZH GLY E 528 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH SER E 529 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH HIS E 530 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH HIS E 531 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH HIS E 532 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH HIS E 533 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH HIS E 534 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH HIS E 535 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH GLY A 528 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH SER A 529 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH HIS A 530 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH HIS A 531 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH HIS A 532 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH HIS A 533 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH HIS A 534 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZH HIS A 535 UNP P0DTC2 EXPRESSION TAG SEQRES 1 E 205 ASN ILE THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN SEQRES 2 E 205 ALA THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS SEQRES 3 E 205 ARG ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR SEQRES 4 E 205 ASN SER ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SEQRES 5 E 205 SER PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL SEQRES 6 E 205 TYR ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG SEQRES 7 E 205 GLN ILE ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR SEQRES 8 E 205 ASN TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE SEQRES 9 E 205 ALA TRP ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY SEQRES 10 E 205 ASN TYR ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN SEQRES 11 E 205 LEU LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR SEQRES 12 E 205 GLN ALA GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE SEQRES 13 E 205 ASN CYS TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO SEQRES 14 E 205 THR ASN GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL SEQRES 15 E 205 LEU SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS SEQRES 16 E 205 GLY PRO GLY SER HIS HIS HIS HIS HIS HIS SEQRES 1 H 221 GLU VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 221 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 H 221 TYR THR PHE THR GLY TYR TYR MET HIS TRP VAL ARG GLN SEQRES 4 H 221 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY ARG ILE ASN SEQRES 5 H 221 PRO ASN SER GLY GLY THR ASN TYR ALA GLN LYS PHE GLN SEQRES 6 H 221 GLY ARG VAL THR MET THR ARG ASP THR SER ILE SER THR SEQRES 7 H 221 ALA TYR MET GLU LEU SER ARG LEU ARG SER ASP ASP THR SEQRES 8 H 221 ALA VAL TYR TYR CYS ALA ARG SER TYR TYR ASP TYR TRP SEQRES 9 H 221 GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SER THR SEQRES 10 H 221 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 11 H 221 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 12 H 221 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 13 H 221 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 14 H 221 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 15 H 221 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 16 H 221 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 17 H 221 ASP LYS LYS VAL GLU PRO LYS SER CYS ASP LYS THR HIS SEQRES 1 L 216 GLN SER VAL LEU THR GLN PRO PRO SER VAL SER GLU ALA SEQRES 2 L 216 PRO ARG GLN ARG VAL THR ILE SER CYS SER GLY SER SER SEQRES 3 L 216 SER ASN ILE GLY HIS ASN ALA VAL HIS TRP TYR GLN GLN SEQRES 4 L 216 LEU PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR TYR ASP SEQRES 5 L 216 ASP LEU LEU PRO ALA GLY VAL SER ASP ARG PHE SER GLY SEQRES 6 L 216 SER LYS SER GLY THR SER ALA SER LEU ALA ILE SER GLY SEQRES 7 L 216 LEU GLN SER GLU ASP GLU ALA ASP TYR TYR CYS ALA ALA SEQRES 8 L 216 TRP ASP ASP ILE LEU ASN GLY PRO VAL PHE GLY GLY GLY SEQRES 9 L 216 THR LYS LEU THR VAL LEU GLY GLN PRO LYS ALA ASN PRO SEQRES 10 L 216 THR VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN SEQRES 11 L 216 ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE SEQRES 12 L 216 TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP GLY SEQRES 13 L 216 SER PRO VAL LYS ALA GLY VAL GLU THR THR LYS PRO SER SEQRES 14 L 216 LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SEQRES 15 L 216 SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SEQRES 16 L 216 SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS SEQRES 17 L 216 THR VAL ALA PRO THR GLU CYS SER SEQRES 1 A 205 ASN ILE THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN SEQRES 2 A 205 ALA THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS SEQRES 3 A 205 ARG ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR SEQRES 4 A 205 ASN SER ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SEQRES 5 A 205 SER PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL SEQRES 6 A 205 TYR ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG SEQRES 7 A 205 GLN ILE ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR SEQRES 8 A 205 ASN TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE SEQRES 9 A 205 ALA TRP ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY SEQRES 10 A 205 ASN TYR ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN SEQRES 11 A 205 LEU LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR SEQRES 12 A 205 GLN ALA GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE SEQRES 13 A 205 ASN CYS TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO SEQRES 14 A 205 THR ASN GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL SEQRES 15 A 205 LEU SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS SEQRES 16 A 205 GLY PRO GLY SER HIS HIS HIS HIS HIS HIS SEQRES 1 B 221 GLU VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 B 221 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 B 221 TYR THR PHE THR GLY TYR TYR MET HIS TRP VAL ARG GLN SEQRES 4 B 221 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY ARG ILE ASN SEQRES 5 B 221 PRO ASN SER GLY GLY THR ASN TYR ALA GLN LYS PHE GLN SEQRES 6 B 221 GLY ARG VAL THR MET THR ARG ASP THR SER ILE SER THR SEQRES 7 B 221 ALA TYR MET GLU LEU SER ARG LEU ARG SER ASP ASP THR SEQRES 8 B 221 ALA VAL TYR TYR CYS ALA ARG SER TYR TYR ASP TYR TRP SEQRES 9 B 221 GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SER THR SEQRES 10 B 221 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 11 B 221 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 12 B 221 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 13 B 221 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 14 B 221 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 15 B 221 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 16 B 221 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 17 B 221 ASP LYS LYS VAL GLU PRO LYS SER CYS ASP LYS THR HIS SEQRES 1 C 216 GLN SER VAL LEU THR GLN PRO PRO SER VAL SER GLU ALA SEQRES 2 C 216 PRO ARG GLN ARG VAL THR ILE SER CYS SER GLY SER SER SEQRES 3 C 216 SER ASN ILE GLY HIS ASN ALA VAL HIS TRP TYR GLN GLN SEQRES 4 C 216 LEU PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR TYR ASP SEQRES 5 C 216 ASP LEU LEU PRO ALA GLY VAL SER ASP ARG PHE SER GLY SEQRES 6 C 216 SER LYS SER GLY THR SER ALA SER LEU ALA ILE SER GLY SEQRES 7 C 216 LEU GLN SER GLU ASP GLU ALA ASP TYR TYR CYS ALA ALA SEQRES 8 C 216 TRP ASP ASP ILE LEU ASN GLY PRO VAL PHE GLY GLY GLY SEQRES 9 C 216 THR LYS LEU THR VAL LEU GLY GLN PRO LYS ALA ASN PRO SEQRES 10 C 216 THR VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN SEQRES 11 C 216 ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE SEQRES 12 C 216 TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP GLY SEQRES 13 C 216 SER PRO VAL LYS ALA GLY VAL GLU THR THR LYS PRO SER SEQRES 14 C 216 LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SEQRES 15 C 216 SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SEQRES 16 C 216 SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS SEQRES 17 C 216 THR VAL ALA PRO THR GLU CYS SER HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET FUC F 5 10 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 7 NAG 4(C8 H15 N O6) FORMUL 7 BMA 2(C6 H12 O6) FORMUL 8 MAN C6 H12 O6 FORMUL 8 FUC C6 H12 O5 FORMUL 9 HOH *226(H2 O) HELIX 1 AA1 PRO E 337 ASN E 343 1 7 HELIX 2 AA2 SER E 349 TRP E 353 5 5 HELIX 3 AA3 ASP E 364 ASN E 370 1 7 HELIX 4 AA4 SER E 383 ASP E 389 5 7 HELIX 5 AA5 ASP E 405 ILE E 410 5 6 HELIX 6 AA6 GLY E 416 ASN E 422 1 7 HELIX 7 AA7 SER E 438 SER E 443 1 6 HELIX 8 AA8 GLY E 502 TYR E 505 5 4 HELIX 9 AA9 THR H 28 TYR H 32 5 5 HELIX 10 AB1 GLN H 62 GLN H 65 5 4 HELIX 11 AB2 THR H 74 ILE H 76 5 3 HELIX 12 AB3 ARG H 87 THR H 91 5 5 HELIX 13 AB4 SER H 157 ALA H 159 5 3 HELIX 14 AB5 SER H 188 LEU H 190 5 3 HELIX 15 AB6 GLN L 80 GLU L 84 5 5 HELIX 16 AB7 SER L 125 ALA L 131 1 7 HELIX 17 AB8 THR L 185 HIS L 192 1 8 HELIX 18 AB9 PRO A 337 ASN A 343 1 7 HELIX 19 AC1 SER A 349 TRP A 353 5 5 HELIX 20 AC2 ASP A 364 ASN A 370 1 7 HELIX 21 AC3 SER A 383 ASP A 389 5 7 HELIX 22 AC4 ASP A 405 ILE A 410 5 6 HELIX 23 AC5 GLY A 416 ASN A 422 1 7 HELIX 24 AC6 SER A 438 SER A 443 1 6 HELIX 25 AC7 GLY A 502 TYR A 505 5 4 HELIX 26 AC8 THR B 28 TYR B 32 5 5 HELIX 27 AC9 GLN B 62 GLN B 65 5 4 HELIX 28 AD1 THR B 74 ILE B 76 5 3 HELIX 29 AD2 ARG B 87 THR B 91 5 5 HELIX 30 AD3 SER B 157 ALA B 159 5 3 HELIX 31 AD4 SER B 188 LEU B 190 5 3 HELIX 32 AD5 GLN C 80 GLU C 84 5 5 HELIX 33 AD6 SER C 125 ALA C 131 1 7 HELIX 34 AD7 THR C 185 SER C 191 1 7 SHEET 1 AA1 5 ASN E 354 ILE E 358 0 SHEET 2 AA1 5 ASN E 394 ARG E 403 -1 O VAL E 395 N ILE E 358 SHEET 3 AA1 5 PRO E 507 GLU E 516 -1 O VAL E 512 N ASP E 398 SHEET 4 AA1 5 GLY E 431 ASN E 437 -1 N ILE E 434 O VAL E 511 SHEET 5 AA1 5 THR E 376 TYR E 380 -1 N LYS E 378 O VAL E 433 SHEET 1 AA2 3 CYS E 361 VAL E 362 0 SHEET 2 AA2 3 VAL E 524 CYS E 525 1 O CYS E 525 N CYS E 361 SHEET 3 AA2 3 CYS E 391 PHE E 392 -1 N PHE E 392 O VAL E 524 SHEET 1 AA3 2 LEU E 452 ARG E 454 0 SHEET 2 AA3 2 LEU E 492 SER E 494 -1 O GLN E 493 N TYR E 453 SHEET 1 AA4 2 TYR E 473 GLN E 474 0 SHEET 2 AA4 2 CYS E 488 TYR E 489 -1 O TYR E 489 N TYR E 473 SHEET 1 AA5 4 GLN H 3 GLN H 6 0 SHEET 2 AA5 4 VAL H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AA5 4 THR H 78 LEU H 83 -1 O MET H 81 N VAL H 20 SHEET 4 AA5 4 VAL H 68 ASP H 73 -1 N THR H 71 O TYR H 80 SHEET 1 AA6 6 GLU H 10 LYS H 12 0 SHEET 2 AA6 6 THR H 108 VAL H 112 1 O LEU H 109 N GLU H 10 SHEET 3 AA6 6 ALA H 92 ARG H 98 -1 N TYR H 94 O THR H 108 SHEET 4 AA6 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA6 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA6 6 THR H 58 TYR H 60 -1 O ASN H 59 N ARG H 50 SHEET 1 AA7 4 SER H 121 LEU H 125 0 SHEET 2 AA7 4 THR H 136 TYR H 146 -1 O LEU H 142 N PHE H 123 SHEET 3 AA7 4 TYR H 177 PRO H 186 -1 O VAL H 183 N LEU H 139 SHEET 4 AA7 4 VAL H 164 THR H 166 -1 N HIS H 165 O VAL H 182 SHEET 1 AA8 4 SER H 121 LEU H 125 0 SHEET 2 AA8 4 THR H 136 TYR H 146 -1 O LEU H 142 N PHE H 123 SHEET 3 AA8 4 TYR H 177 PRO H 186 -1 O VAL H 183 N LEU H 139 SHEET 4 AA8 4 VAL H 170 LEU H 171 -1 N VAL H 170 O SER H 178 SHEET 1 AA9 3 VAL H 151 TRP H 155 0 SHEET 2 AA9 3 ILE H 196 HIS H 201 -1 O ASN H 198 N SER H 154 SHEET 3 AA9 3 THR H 206 LYS H 211 -1 O VAL H 208 N VAL H 199 SHEET 1 AB1 5 SER L 9 GLU L 12 0 SHEET 2 AB1 5 THR L 105 VAL L 109 1 O LYS L 106 N VAL L 10 SHEET 3 AB1 5 ASP L 86 ASP L 93 -1 N TYR L 87 O THR L 105 SHEET 4 AB1 5 VAL L 34 GLN L 39 -1 N GLN L 39 O ASP L 86 SHEET 5 AB1 5 LYS L 46 ILE L 49 -1 O LEU L 48 N TRP L 36 SHEET 1 AB2 4 SER L 9 GLU L 12 0 SHEET 2 AB2 4 THR L 105 VAL L 109 1 O LYS L 106 N VAL L 10 SHEET 3 AB2 4 ASP L 86 ASP L 93 -1 N TYR L 87 O THR L 105 SHEET 4 AB2 4 GLY L 98 PHE L 101 -1 O VAL L 100 N ALA L 91 SHEET 1 AB3 3 VAL L 18 SER L 23 0 SHEET 2 AB3 3 SER L 71 ILE L 76 -1 O ILE L 76 N VAL L 18 SHEET 3 AB3 3 PHE L 63 SER L 68 -1 N SER L 64 O ALA L 75 SHEET 1 AB4 4 THR L 118 PHE L 122 0 SHEET 2 AB4 4 ALA L 134 PHE L 143 -1 O VAL L 137 N PHE L 122 SHEET 3 AB4 4 TYR L 176 LEU L 184 -1 O LEU L 184 N ALA L 134 SHEET 4 AB4 4 VAL L 163 THR L 165 -1 N GLU L 164 O TYR L 181 SHEET 1 AB5 4 THR L 118 PHE L 122 0 SHEET 2 AB5 4 ALA L 134 PHE L 143 -1 O VAL L 137 N PHE L 122 SHEET 3 AB5 4 TYR L 176 LEU L 184 -1 O LEU L 184 N ALA L 134 SHEET 4 AB5 4 SER L 169 LYS L 170 -1 N SER L 169 O ALA L 177 SHEET 1 AB6 4 SER L 157 VAL L 159 0 SHEET 2 AB6 4 THR L 149 ALA L 154 -1 N TRP L 152 O VAL L 159 SHEET 3 AB6 4 TYR L 195 HIS L 201 -1 O GLN L 198 N ALA L 151 SHEET 4 AB6 4 SER L 204 VAL L 210 -1 O SER L 204 N HIS L 201 SHEET 1 AB7 5 ASN A 354 ILE A 358 0 SHEET 2 AB7 5 ASN A 394 ARG A 403 -1 O VAL A 395 N ILE A 358 SHEET 3 AB7 5 PRO A 507 GLU A 516 -1 O VAL A 512 N ASP A 398 SHEET 4 AB7 5 GLY A 431 ASN A 437 -1 N ILE A 434 O VAL A 511 SHEET 5 AB7 5 THR A 376 TYR A 380 -1 N TYR A 380 O GLY A 431 SHEET 1 AB8 3 CYS A 361 VAL A 362 0 SHEET 2 AB8 3 VAL A 524 CYS A 525 1 O CYS A 525 N CYS A 361 SHEET 3 AB8 3 CYS A 391 PHE A 392 -1 N PHE A 392 O VAL A 524 SHEET 1 AB9 2 LEU A 452 ARG A 454 0 SHEET 2 AB9 2 LEU A 492 SER A 494 -1 O GLN A 493 N TYR A 453 SHEET 1 AC1 2 TYR A 473 GLN A 474 0 SHEET 2 AC1 2 CYS A 488 TYR A 489 -1 O TYR A 489 N TYR A 473 SHEET 1 AC2 4 GLN B 3 GLN B 6 0 SHEET 2 AC2 4 VAL B 18 SER B 25 -1 O LYS B 23 N VAL B 5 SHEET 3 AC2 4 THR B 78 LEU B 83 -1 O MET B 81 N VAL B 20 SHEET 4 AC2 4 VAL B 68 ASP B 73 -1 N ASP B 73 O THR B 78 SHEET 1 AC3 6 GLU B 10 LYS B 12 0 SHEET 2 AC3 6 THR B 108 VAL B 112 1 O THR B 111 N LYS B 12 SHEET 3 AC3 6 ALA B 92 ARG B 98 -1 N ALA B 92 O VAL B 110 SHEET 4 AC3 6 MET B 34 GLN B 39 -1 N VAL B 37 O TYR B 95 SHEET 5 AC3 6 GLU B 46 ILE B 51 -1 O MET B 48 N TRP B 36 SHEET 6 AC3 6 THR B 58 TYR B 60 -1 O ASN B 59 N ARG B 50 SHEET 1 AC4 4 GLU B 10 LYS B 12 0 SHEET 2 AC4 4 THR B 108 VAL B 112 1 O THR B 111 N LYS B 12 SHEET 3 AC4 4 ALA B 92 ARG B 98 -1 N ALA B 92 O VAL B 110 SHEET 4 AC4 4 TYR B 103 TRP B 104 -1 O TYR B 103 N ARG B 98 SHEET 1 AC5 4 SER B 121 LEU B 125 0 SHEET 2 AC5 4 THR B 136 TYR B 146 -1 O LYS B 144 N SER B 121 SHEET 3 AC5 4 TYR B 177 PRO B 186 -1 O TYR B 177 N TYR B 146 SHEET 4 AC5 4 VAL B 164 THR B 166 -1 N HIS B 165 O VAL B 182 SHEET 1 AC6 4 SER B 121 LEU B 125 0 SHEET 2 AC6 4 THR B 136 TYR B 146 -1 O LYS B 144 N SER B 121 SHEET 3 AC6 4 TYR B 177 PRO B 186 -1 O TYR B 177 N TYR B 146 SHEET 4 AC6 4 VAL B 170 LEU B 171 -1 N VAL B 170 O SER B 178 SHEET 1 AC7 3 THR B 152 TRP B 155 0 SHEET 2 AC7 3 TYR B 195 HIS B 201 -1 O ASN B 198 N SER B 154 SHEET 3 AC7 3 THR B 206 VAL B 212 -1 O VAL B 208 N VAL B 199 SHEET 1 AC8 5 SER C 9 GLU C 12 0 SHEET 2 AC8 5 THR C 105 VAL C 109 1 O LYS C 106 N VAL C 10 SHEET 3 AC8 5 ALA C 85 ASP C 93 -1 N ALA C 85 O LEU C 107 SHEET 4 AC8 5 VAL C 34 GLN C 39 -1 N GLN C 39 O ASP C 86 SHEET 5 AC8 5 PRO C 45 ILE C 49 -1 O LEU C 48 N TRP C 36 SHEET 1 AC9 4 SER C 9 GLU C 12 0 SHEET 2 AC9 4 THR C 105 VAL C 109 1 O LYS C 106 N VAL C 10 SHEET 3 AC9 4 ALA C 85 ASP C 93 -1 N ALA C 85 O LEU C 107 SHEET 4 AC9 4 GLY C 98 PHE C 101 -1 O VAL C 100 N ALA C 91 SHEET 1 AD1 3 VAL C 18 SER C 23 0 SHEET 2 AD1 3 SER C 71 ILE C 76 -1 O ILE C 76 N VAL C 18 SHEET 3 AD1 3 PHE C 63 SER C 68 -1 N SER C 64 O ALA C 75 SHEET 1 AD2 4 THR C 118 PHE C 122 0 SHEET 2 AD2 4 ALA C 134 PHE C 143 -1 O VAL C 137 N PHE C 122 SHEET 3 AD2 4 TYR C 176 LEU C 184 -1 O LEU C 184 N ALA C 134 SHEET 4 AD2 4 VAL C 163 THR C 165 -1 N GLU C 164 O TYR C 181 SHEET 1 AD3 4 THR C 118 PHE C 122 0 SHEET 2 AD3 4 ALA C 134 PHE C 143 -1 O VAL C 137 N PHE C 122 SHEET 3 AD3 4 TYR C 176 LEU C 184 -1 O LEU C 184 N ALA C 134 SHEET 4 AD3 4 SER C 169 LYS C 170 -1 N SER C 169 O ALA C 177 SHEET 1 AD4 4 SER C 157 PRO C 158 0 SHEET 2 AD4 4 THR C 149 ALA C 154 -1 N ALA C 154 O SER C 157 SHEET 3 AD4 4 TYR C 195 HIS C 201 -1 O GLN C 198 N ALA C 151 SHEET 4 AD4 4 SER C 204 VAL C 210 -1 O VAL C 206 N VAL C 199 SSBOND 1 CYS E 336 CYS E 361 1555 1555 2.05 SSBOND 2 CYS E 379 CYS E 432 1555 1555 2.07 SSBOND 3 CYS E 391 CYS E 525 1555 1555 2.05 SSBOND 4 CYS E 480 CYS E 488 1555 1555 2.08 SSBOND 5 CYS H 22 CYS H 96 1555 1555 2.00 SSBOND 6 CYS H 141 CYS H 197 1555 1555 2.05 SSBOND 7 CYS H 217 CYS L 215 1555 1555 2.01 SSBOND 8 CYS L 22 CYS L 89 1555 1555 2.01 SSBOND 9 CYS L 138 CYS L 197 1555 1555 2.01 SSBOND 10 CYS A 336 CYS A 361 1555 1555 2.02 SSBOND 11 CYS A 379 CYS A 432 1555 1555 2.08 SSBOND 12 CYS A 391 CYS A 525 1555 1555 2.08 SSBOND 13 CYS A 480 CYS A 488 1555 1555 2.09 SSBOND 14 CYS B 22 CYS B 96 1555 1555 2.05 SSBOND 15 CYS B 141 CYS B 197 1555 1555 2.02 SSBOND 16 CYS C 22 CYS C 89 1555 1555 2.05 SSBOND 17 CYS C 138 CYS C 197 1555 1555 2.01 LINK ND2 ASN E 343 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 343 C1 NAG F 1 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.37 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.38 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.38 LINK O6 NAG F 1 C1 FUC F 5 1555 1555 1.38 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.37 LINK O3 BMA F 3 C1 MAN F 4 1555 1555 1.38 CISPEP 1 PHE H 147 PRO H 148 0 -12.65 CISPEP 2 GLU H 149 PRO H 150 0 1.48 CISPEP 3 TYR L 144 PRO L 145 0 -3.35 CISPEP 4 PHE B 147 PRO B 148 0 -11.27 CISPEP 5 GLU B 149 PRO B 150 0 2.22 CISPEP 6 TYR C 144 PRO C 145 0 -1.94 CRYST1 93.704 72.833 103.988 90.00 90.71 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010672 0.000000 0.000132 0.00000 SCALE2 0.000000 0.013730 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009617 0.00000