HEADER CELL ADHESION 04-JUN-21 7N4P TITLE CRYSTAL STRUCTURE OF LIZARD CADHERIN-23 EC1-2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CADHERIN 23; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANOLIS CAROLINENSIS; SOURCE 3 ORGANISM_COMMON: GREEN ANOLE, AMERICAN CHAMELEON; SOURCE 4 ORGANISM_TAXID: 28377; SOURCE 5 GENE: CDH23; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A+ KEYWDS HEARING, MECHANOTRANSDUCTION, ADHESION, CALCIUM-BINDING PROTEIN, CELL KEYWDS 2 ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR C.R.NISLER,M.SOTOMAYOR REVDAT 4 25-OCT-23 7N4P 1 REMARK REVDAT 3 26-APR-23 7N4P 1 JRNL REVDAT 2 22-MAR-23 7N4P 1 JRNL REVDAT 1 15-JUN-22 7N4P 0 JRNL AUTH C.R.NISLER,Y.NARUI,E.SCHEIB,D.CHOUDHARY,J.D.BOWMAN, JRNL AUTH 2 H.MANDAYAM BHARATHI,V.J.LYNCH,M.SOTOMAYOR JRNL TITL INTERPRETING THE EVOLUTIONARY ECHOES OF A PROTEIN COMPLEX JRNL TITL 2 ESSENTIAL FOR INNER-EAR MECHANOSENSATION. JRNL REF MOL.BIOL.EVOL. V. 40 2023 JRNL REFN ESSN 1537-1719 JRNL PMID 36911992 JRNL DOI 10.1093/MOLBEV/MSAD057 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 17565 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.073 REMARK 3 FREE R VALUE TEST SET COUNT : 891 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1060 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.3070 REMARK 3 BIN FREE R VALUE SET COUNT : 46 REMARK 3 BIN FREE R VALUE : 0.4050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1613 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 148 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.92100 REMARK 3 B22 (A**2) : 1.92100 REMARK 3 B33 (A**2) : -3.84300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.196 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.187 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.159 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.875 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1675 ; 0.014 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1543 ; 0.003 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2294 ; 1.857 ; 1.643 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3546 ; 1.396 ; 1.576 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 212 ; 7.924 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 94 ;36.348 ;23.723 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 258 ;15.058 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;17.002 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 225 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1959 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 403 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 332 ; 0.227 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 42 ; 0.151 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 826 ; 0.172 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 124 ; 0.207 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 38 ; 0.209 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 833 ; 1.773 ; 2.600 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 832 ; 1.774 ; 2.596 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1041 ; 2.797 ; 3.885 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1042 ; 2.796 ; 3.889 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 842 ; 2.011 ; 2.855 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 840 ; 2.008 ; 2.847 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1250 ; 3.218 ; 4.177 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1250 ; 3.219 ; 4.176 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 101 REMARK 3 RESIDUE RANGE : A 302 A 302 REMARK 3 RESIDUE RANGE : A 303 A 304 REMARK 3 ORIGIN FOR THE GROUP (A): 3.4000 4.4240 -49.6238 REMARK 3 T TENSOR REMARK 3 T11: 0.0628 T22: 0.1402 REMARK 3 T33: 0.1055 T12: 0.0346 REMARK 3 T13: -0.0056 T23: -0.0230 REMARK 3 L TENSOR REMARK 3 L11: 2.1418 L22: 0.5023 REMARK 3 L33: 8.8269 L12: -0.1159 REMARK 3 L13: -0.6903 L23: 1.4831 REMARK 3 S TENSOR REMARK 3 S11: -0.0419 S12: 0.0532 S13: -0.3247 REMARK 3 S21: 0.0435 S22: -0.0409 S23: 0.0613 REMARK 3 S31: 0.6240 S32: 0.0230 S33: 0.0829 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 102 A 206 REMARK 3 RESIDUE RANGE : A 305 A 306 REMARK 3 RESIDUE RANGE : A 301 A 301 REMARK 3 RESIDUE RANGE : A 307 A 307 REMARK 3 ORIGIN FOR THE GROUP (A): 2.3323 15.9494 -2.6669 REMARK 3 T TENSOR REMARK 3 T11: 0.0422 T22: 0.2152 REMARK 3 T33: 0.0561 T12: -0.0483 REMARK 3 T13: 0.0265 T23: -0.0327 REMARK 3 L TENSOR REMARK 3 L11: 0.8894 L22: 1.2625 REMARK 3 L33: 7.5736 L12: 0.0747 REMARK 3 L13: 1.2684 L23: 1.7617 REMARK 3 S TENSOR REMARK 3 S11: -0.0242 S12: 0.1074 S13: 0.0551 REMARK 3 S21: 0.2112 S22: -0.1125 S23: 0.0983 REMARK 3 S31: 0.2892 S32: -0.7042 S33: 0.1367 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 7N4P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1000257316. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17931 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.097 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.6500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2WHV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.5 1.1 M CACL2, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 148.11350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 21.69300 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 21.69300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 74.05675 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 21.69300 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 21.69300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 222.17025 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 21.69300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 21.69300 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 74.05675 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 21.69300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 21.69300 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 222.17025 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 148.11350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 500 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 207 REMARK 465 ASP A 208 REMARK 465 PRO A 209 REMARK 465 LEU A 210 REMARK 465 GLU A 211 REMARK 465 HIS A 212 REMARK 465 HIS A 213 REMARK 465 HIS A 214 REMARK 465 HIS A 215 REMARK 465 HIS A 216 REMARK 465 HIS A 217 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 13 -102.98 -124.06 REMARK 500 ASP A 36 0.36 -63.55 REMARK 500 ASP A 169 101.18 -161.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 85 GLN A 86 -145.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 1 OD1 REMARK 620 2 ARG A 2 O 81.3 REMARK 620 3 ASP A 34 OD1 135.1 98.5 REMARK 620 4 ASP A 34 OD2 166.5 87.5 54.1 REMARK 620 5 ASP A 36 OD1 65.9 79.6 69.9 119.6 REMARK 620 6 ASP A 38 OD2 88.3 169.4 87.6 103.1 94.4 REMARK 620 7 ASP A 84 OD2 79.8 81.2 144.9 91.0 142.7 98.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 309 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 12 OD1 REMARK 620 2 SER A 192 O 24.9 REMARK 620 3 HOH A 425 O 26.7 5.3 REMARK 620 4 HOH A 461 O 24.2 3.9 2.7 REMARK 620 5 HOH A 475 O 28.3 3.4 5.9 6.1 REMARK 620 6 HOH A 527 O 27.5 5.1 1.0 3.3 5.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 19 OE2 REMARK 620 2 GLU A 71 OE1 90.2 REMARK 620 3 GLU A 71 OE2 115.7 49.6 REMARK 620 4 ASP A 99 OD1 88.1 118.2 76.7 REMARK 620 5 VAL A 100 O 77.4 156.6 153.8 81.5 REMARK 620 6 ASP A 102 OD1 85.7 77.8 120.4 162.8 81.5 REMARK 620 7 ASP A 135 OD1 157.3 99.1 85.6 105.3 86.3 76.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 19 OE1 REMARK 620 2 ASP A 69 OD1 93.1 REMARK 620 3 GLU A 71 OE1 91.4 86.9 REMARK 620 4 ASP A 102 OD1 90.3 156.8 70.0 REMARK 620 5 ASP A 102 OD2 83.9 159.1 113.7 44.1 REMARK 620 6 HOH A 463 O 96.3 83.0 167.6 119.4 76.8 REMARK 620 7 HOH A 515 O 174.2 90.8 84.4 84.4 93.9 88.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 101 OD1 REMARK 620 2 ASN A 103 O 110.1 REMARK 620 3 ASP A 133 OD1 138.7 95.3 REMARK 620 4 ASP A 133 OD2 159.5 81.6 52.3 REMARK 620 5 ASP A 135 OD2 74.2 76.3 81.3 125.9 REMARK 620 6 GLY A 139 O 83.8 166.1 73.5 85.0 109.1 REMARK 620 7 ASP A 184 OD2 75.5 97.7 134.1 86.5 144.6 85.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 118 OE2 REMARK 620 2 GLU A 171 OE1 92.6 REMARK 620 3 GLU A 171 OE2 120.6 46.6 REMARK 620 4 ASP A 203 OD1 77.4 111.4 81.5 REMARK 620 5 VAL A 204 O 71.0 154.7 158.7 84.4 REMARK 620 6 HOH A 435 O 141.0 124.9 95.5 95.7 70.1 REMARK 620 7 HOH A 438 O 84.4 89.8 126.0 152.3 70.0 85.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 118 OE1 REMARK 620 2 ASP A 169 OD1 96.3 REMARK 620 3 GLU A 171 OE1 88.7 74.6 REMARK 620 4 HOH A 438 O 80.6 159.6 85.2 REMARK 620 5 HOH A 488 O 166.3 97.1 92.2 85.8 REMARK 620 6 HOH A 531 O 94.5 85.4 160.0 114.8 89.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 307 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 130 OD1 REMARK 620 2 HOH A 412 O 64.2 REMARK 620 3 HOH A 415 O 147.4 145.6 REMARK 620 4 HOH A 429 O 75.7 110.3 78.8 REMARK 620 5 HOH A 465 O 82.8 127.8 81.1 98.1 REMARK 620 6 HOH A 540 O 131.6 82.4 77.4 151.9 92.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 308 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 133 O REMARK 620 2 GLY A 140 O 88.2 REMARK 620 3 HOH A 419 O 65.7 145.4 REMARK 620 4 HOH A 474 O 76.7 110.9 85.8 REMARK 620 5 HOH A 513 O 83.8 83.0 72.4 155.3 REMARK 620 6 HOH A 538 O 144.4 121.5 91.7 74.5 116.5 REMARK 620 N 1 2 3 4 5 DBREF 7N4P A 1 209 UNP R4GAX0 R4GAX0_ANOCA 26 234 SEQADV 7N4P MET A 0 UNP R4GAX0 INITIATING METHIONINE SEQADV 7N4P LEU A 210 UNP R4GAX0 EXPRESSION TAG SEQADV 7N4P GLU A 211 UNP R4GAX0 EXPRESSION TAG SEQADV 7N4P HIS A 212 UNP R4GAX0 EXPRESSION TAG SEQADV 7N4P HIS A 213 UNP R4GAX0 EXPRESSION TAG SEQADV 7N4P HIS A 214 UNP R4GAX0 EXPRESSION TAG SEQADV 7N4P HIS A 215 UNP R4GAX0 EXPRESSION TAG SEQADV 7N4P HIS A 216 UNP R4GAX0 EXPRESSION TAG SEQADV 7N4P HIS A 217 UNP R4GAX0 EXPRESSION TAG SEQRES 1 A 218 MET ASN ARG LEU PRO TYR PHE ILE ASN TYR PHE PHE ASP SEQRES 2 A 218 THR TYR LEU LEU ILE ASN GLU ASP THR PRO VAL GLY SER SEQRES 3 A 218 SER VAL THR GLN LEU LEU ALA ARG ASP LEU ASP ASN ASP SEQRES 4 A 218 PRO LEU VAL PHE GLY VAL VAL GLY GLU GLU ALA SER ARG SEQRES 5 A 218 PHE PHE ALA VAL GLU SER MET THR GLY VAL VAL TRP LEU SEQRES 6 A 218 ARG GLN PRO LEU ASP ARG GLU THR LYS SER GLU PHE THR SEQRES 7 A 218 VAL GLU PHE SER VAL SER ASP SER GLN GLY VAL ILE LYS SEQRES 8 A 218 GLY SER VAL ASN ILE GLN VAL GLY ASP VAL ASN ASP ASN SEQRES 9 A 218 ALA PRO ARG PHE HIS ASN GLN PRO TYR SER VAL ARG ILE SEQRES 10 A 218 PRO GLU ASN THR PRO VAL GLY THR PRO ILE PHE ILE VAL SEQRES 11 A 218 ASN ALA THR ASP PRO ASP GLN GLY ALA GLY GLY SER VAL SEQRES 12 A 218 LEU TYR SER PHE GLN PRO SER SER ASN PHE PHE THR ILE SEQRES 13 A 218 ASP SER GLY ARG GLY ILE VAL SER VAL ILE ARG ALA LEU SEQRES 14 A 218 ASP TYR GLU VAL THR GLN ALA TYR GLN LEU GLN VAL ASN SEQRES 15 A 218 ALA THR ASP GLN ASP LYS THR LYS PRO LEU SER THR LEU SEQRES 16 A 218 ALA ASN LEU ALA ILE THR ILE THR ASP VAL GLN ASP MET SEQRES 17 A 218 ASP PRO LEU GLU HIS HIS HIS HIS HIS HIS HET CA A 301 1 HET CA A 302 1 HET CA A 303 1 HET CA A 304 1 HET CA A 305 1 HET CA A 306 1 HET NA A 307 1 HET NA A 308 1 HET NA A 309 1 HETNAM CA CALCIUM ION HETNAM NA SODIUM ION FORMUL 2 CA 6(CA 2+) FORMUL 8 NA 3(NA 1+) FORMUL 11 HOH *148(H2 O) HELIX 1 AA1 ASN A 8 ASP A 12 5 5 HELIX 2 AA2 GLY A 46 PHE A 52 1 7 HELIX 3 AA3 GLN A 136 GLY A 140 5 5 SHEET 1 AA1 2 TYR A 5 PHE A 6 0 SHEET 2 AA1 2 ALA A 32 ARG A 33 -1 O ARG A 33 N TYR A 5 SHEET 1 AA2 4 LEU A 15 ASN A 18 0 SHEET 2 AA2 4 VAL A 88 GLY A 98 1 O GLN A 96 N LEU A 15 SHEET 3 AA2 4 GLU A 75 SER A 83 -1 N PHE A 76 O ILE A 95 SHEET 4 AA2 4 VAL A 41 VAL A 45 -1 N VAL A 41 O SER A 83 SHEET 1 AA3 3 SER A 26 GLN A 29 0 SHEET 2 AA3 3 VAL A 61 LEU A 64 -1 O VAL A 62 N VAL A 27 SHEET 3 AA3 3 PHE A 53 VAL A 55 -1 N ALA A 54 O TRP A 63 SHEET 1 AA4 2 ARG A 106 PHE A 107 0 SHEET 2 AA4 2 ALA A 131 THR A 132 -1 O THR A 132 N ARG A 106 SHEET 1 AA5 4 TYR A 112 PRO A 117 0 SHEET 2 AA5 4 SER A 192 THR A 202 1 O THR A 200 N VAL A 114 SHEET 3 AA5 4 ALA A 175 ASP A 184 -1 N VAL A 180 O ALA A 195 SHEET 4 AA5 4 VAL A 142 GLN A 147 -1 N SER A 145 O ASN A 181 SHEET 1 AA6 3 PRO A 125 ILE A 128 0 SHEET 2 AA6 3 ILE A 161 VAL A 164 -1 O VAL A 162 N PHE A 127 SHEET 3 AA6 3 PHE A 153 ILE A 155 -1 N THR A 154 O SER A 163 LINK OD1 ASN A 1 CA CA A 304 1555 1555 2.46 LINK O ARG A 2 CA CA A 304 1555 1555 2.37 LINK OD1 ASP A 12 NA NA A 309 1555 6554 3.09 LINK OE2 GLU A 19 CA CA A 302 1555 1555 2.39 LINK OE1 GLU A 19 CA CA A 303 1555 1555 2.28 LINK OD1 ASP A 34 CA CA A 304 1555 1555 2.67 LINK OD2 ASP A 34 CA CA A 304 1555 1555 2.20 LINK OD1 ASP A 36 CA CA A 304 1555 1555 2.38 LINK OD2 ASP A 38 CA CA A 304 1555 1555 2.24 LINK OD1 ASP A 69 CA CA A 303 1555 1555 2.31 LINK OE1 GLU A 71 CA CA A 302 1555 1555 2.74 LINK OE2 GLU A 71 CA CA A 302 1555 1555 2.33 LINK OE1 GLU A 71 CA CA A 303 1555 1555 2.30 LINK OD2 ASP A 84 CA CA A 304 1555 1555 2.53 LINK OD1 ASP A 99 CA CA A 302 1555 1555 2.27 LINK O VAL A 100 CA CA A 302 1555 1555 2.38 LINK OD1 ASN A 101 CA CA A 301 1555 1555 2.34 LINK OD1 ASP A 102 CA CA A 302 1555 1555 2.30 LINK OD1 ASP A 102 CA CA A 303 1555 1555 3.13 LINK OD2 ASP A 102 CA CA A 303 1555 1555 2.29 LINK O ASN A 103 CA CA A 301 1555 1555 2.30 LINK OE2 GLU A 118 CA CA A 305 1555 1555 2.51 LINK OE1 GLU A 118 CA CA A 306 1555 1555 2.36 LINK OD1 ASN A 130 NA NA A 307 1555 1555 2.43 LINK OD1 ASP A 133 CA CA A 301 1555 1555 2.55 LINK OD2 ASP A 133 CA CA A 301 1555 1555 2.51 LINK O ASP A 133 NA NA A 308 1555 1555 2.41 LINK OD2 ASP A 135 CA CA A 301 1555 1555 2.37 LINK OD1 ASP A 135 CA CA A 302 1555 1555 2.37 LINK O GLY A 139 CA CA A 301 1555 1555 2.37 LINK O GLY A 140 NA NA A 308 1555 1555 2.48 LINK OD1 ASP A 169 CA CA A 306 1555 1555 2.64 LINK OE1 GLU A 171 CA CA A 305 1555 1555 2.95 LINK OE2 GLU A 171 CA CA A 305 1555 1555 2.59 LINK OE1 GLU A 171 CA CA A 306 1555 1555 2.36 LINK OD2 ASP A 184 CA CA A 301 1555 1555 2.33 LINK O SER A 192 NA NA A 309 1555 1555 2.82 LINK OD1 ASP A 203 CA CA A 305 1555 1555 2.43 LINK O VAL A 204 CA CA A 305 1555 1555 2.28 LINK CA CA A 303 O HOH A 463 1555 1555 2.17 LINK CA CA A 303 O HOH A 515 1555 1555 2.30 LINK CA CA A 305 O HOH A 435 1555 1555 2.30 LINK CA CA A 305 O HOH A 438 1555 1555 2.34 LINK CA CA A 306 O HOH A 438 1555 1555 3.13 LINK CA CA A 306 O HOH A 488 1555 1555 2.08 LINK CA CA A 306 O HOH A 531 1555 1555 2.25 LINK NA NA A 307 O HOH A 412 1555 1555 2.20 LINK NA NA A 307 O HOH A 415 1555 1555 2.59 LINK NA NA A 307 O HOH A 429 1555 1555 2.09 LINK NA NA A 307 O HOH A 465 1555 1555 2.59 LINK NA NA A 307 O HOH A 540 1555 1555 1.92 LINK NA NA A 308 O HOH A 419 1555 1555 2.27 LINK NA NA A 308 O HOH A 474 1555 1555 2.27 LINK NA NA A 308 O HOH A 513 1555 1555 2.20 LINK NA NA A 308 O HOH A 538 1555 1555 1.97 LINK NA NA A 309 O HOH A 425 1555 6454 2.04 LINK NA NA A 309 O HOH A 461 1555 1555 2.80 LINK NA NA A 309 O HOH A 475 1555 1555 2.64 LINK NA NA A 309 O HOH A 527 1555 6454 2.77 CISPEP 1 GLN A 110 PRO A 111 0 8.53 CISPEP 2 GLN A 147 PRO A 148 0 -5.22 CRYST1 43.386 43.386 296.227 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023049 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023049 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003376 0.00000