HEADER DNA BINDING PROTEIN/DNA 06-JUN-21 7N5U TITLE ZBTB7A ZINC FINGER DOMAIN BOUND TO DNA DUPLEX CONTAINING GGACCC (OLIGO TITLE 2 21) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 7A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZINC FINGER DOMAIN (UNP RESIDUES 369-500); COMPND 5 SYNONYM: FACTOR BINDING IST PROTEIN 1,FBI-1,FACTOR THAT BINDS TO COMPND 6 INDUCER OF SHORT TRANSCRIPTS PROTEIN 1,HIV-1 1ST-BINDING PROTEIN 1, COMPND 7 LEUKEMIA/LYMPHOMA-RELATED FACTOR,POZ AND KRUEPPEL ERYTHROID MYELOID COMPND 8 ONTOGENIC FACTOR,POK ERYTHROID MYELOID ONTOGENIC FACTOR,POKEMON, COMPND 9 POKEMON 1,TTF-I-INTERACTING PEPTIDE 21,TIP21,ZINC FINGER PROTEIN COMPND 10 857A; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 2; COMPND 13 MOLECULE: DNA STRAND I; COMPND 14 CHAIN: X; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 3; COMPND 17 MOLECULE: DNA STRAIN II; COMPND 18 CHAIN: Y; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZBTB7A, FBI1, LRF, ZBTB7, ZNF857A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_TAXID: 9606 KEYWDS ZINC-FINGER DOMAIN, GENE EXPRESSION, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.R.HORTON,R.REN,X.CHENG REVDAT 4 15-FEB-23 7N5U 1 JRNL REVDAT 3 25-JAN-23 7N5U 1 JRNL REVDAT 2 07-SEP-22 7N5U 1 JRNL REVDAT 1 08-JUN-22 7N5U 0 JRNL AUTH R.REN,J.R.HORTON,Q.CHEN,J.YANG,B.LIU,Y.HUANG,R.M.BLUMENTHAL, JRNL AUTH 2 X.ZHANG,X.CHENG JRNL TITL STRUCTURAL BASIS FOR TRANSCRIPTION FACTOR ZBTB7A RECOGNITION JRNL TITL 2 OF DNA AND EFFECTS OF ZBTB7A SOMATIC MUTATIONS THAT OCCUR IN JRNL TITL 3 HUMAN ACUTE MYELOID LEUKEMIA. JRNL REF J.BIOL.CHEM. V. 299 02885 2023 JRNL REFN ESSN 1083-351X JRNL PMID 36626981 JRNL DOI 10.1016/J.JBC.2023.102885 REMARK 2 REMARK 2 RESOLUTION. 2.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.490 REMARK 3 COMPLETENESS FOR RANGE (%) : 73.6 REMARK 3 NUMBER OF REFLECTIONS : 4449 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.253 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 445 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1100 - 4.1300 0.99 1856 207 0.2080 0.2444 REMARK 3 2 4.1200 - 3.2800 0.87 1560 173 0.2756 0.3387 REMARK 3 3 3.2700 - 2.8600 0.34 588 65 0.3541 0.4629 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.384 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.31 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 1374 REMARK 3 ANGLE : 0.537 1988 REMARK 3 CHIRALITY : 0.034 215 REMARK 3 PLANARITY : 0.004 146 REMARK 3 DIHEDRAL : 26.844 548 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 379 THROUGH 383 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.0485 56.7181 -11.8386 REMARK 3 T TENSOR REMARK 3 T11: 0.5348 T22: 0.9559 REMARK 3 T33: 0.2563 T12: -0.1855 REMARK 3 T13: 0.0623 T23: -0.0608 REMARK 3 L TENSOR REMARK 3 L11: 2.0004 L22: 9.5882 REMARK 3 L33: 1.9990 L12: 2.0005 REMARK 3 L13: 1.9990 L23: 2.0012 REMARK 3 S TENSOR REMARK 3 S11: 0.3738 S12: 0.0136 S13: 0.4155 REMARK 3 S21: 0.1438 S22: -0.3306 S23: 0.1276 REMARK 3 S31: -0.5108 S32: -0.6613 S33: -0.0614 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 384 THROUGH 389 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.1640 48.6462 -15.6555 REMARK 3 T TENSOR REMARK 3 T11: 0.5355 T22: 0.4313 REMARK 3 T33: 0.1401 T12: -0.3014 REMARK 3 T13: 0.0886 T23: -0.1532 REMARK 3 L TENSOR REMARK 3 L11: 8.1874 L22: 2.7520 REMARK 3 L33: 2.0897 L12: -0.1833 REMARK 3 L13: -3.5949 L23: 1.2658 REMARK 3 S TENSOR REMARK 3 S11: -0.1546 S12: 0.7894 S13: -0.1873 REMARK 3 S21: -0.7952 S22: 0.0441 S23: 0.0372 REMARK 3 S31: -0.1569 S32: -0.4826 S33: 0.0794 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 390 THROUGH 405 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6294 50.1828 -6.6517 REMARK 3 T TENSOR REMARK 3 T11: 0.2818 T22: 0.1416 REMARK 3 T33: 0.2492 T12: -0.0904 REMARK 3 T13: -0.0390 T23: -0.1470 REMARK 3 L TENSOR REMARK 3 L11: 0.8464 L22: 3.6831 REMARK 3 L33: 2.6342 L12: 1.1748 REMARK 3 L13: 0.0636 L23: 1.6694 REMARK 3 S TENSOR REMARK 3 S11: -0.2720 S12: 0.1066 S13: 0.0459 REMARK 3 S21: -0.0641 S22: -0.0222 S23: 0.1172 REMARK 3 S31: -0.0531 S32: -0.1343 S33: -0.0091 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 406 THROUGH 415 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0175 44.7684 8.1150 REMARK 3 T TENSOR REMARK 3 T11: 0.2773 T22: 0.2061 REMARK 3 T33: 0.4763 T12: -0.0088 REMARK 3 T13: -0.0936 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 7.1315 L22: 3.5531 REMARK 3 L33: 9.3468 L12: 2.7729 REMARK 3 L13: -3.5433 L23: -5.6496 REMARK 3 S TENSOR REMARK 3 S11: -0.0929 S12: -0.3484 S13: 0.0287 REMARK 3 S21: 0.6781 S22: -0.7461 S23: -0.8427 REMARK 3 S31: -0.6473 S32: 0.8533 S33: 0.7508 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 416 THROUGH 436 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.9613 43.4073 11.1652 REMARK 3 T TENSOR REMARK 3 T11: 0.3017 T22: 0.1685 REMARK 3 T33: 0.1865 T12: -0.0981 REMARK 3 T13: -0.1042 T23: 0.1334 REMARK 3 L TENSOR REMARK 3 L11: 5.4858 L22: 3.9839 REMARK 3 L33: 3.5236 L12: -1.2410 REMARK 3 L13: -0.2376 L23: 2.3587 REMARK 3 S TENSOR REMARK 3 S11: -0.1482 S12: -0.8332 S13: -0.4874 REMARK 3 S21: 0.6434 S22: -0.1307 S23: 0.4099 REMARK 3 S31: 0.5152 S32: -0.1610 S33: 0.0925 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 437 THROUGH 449 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.4565 40.1026 16.7448 REMARK 3 T TENSOR REMARK 3 T11: 1.0131 T22: 1.3938 REMARK 3 T33: 0.6636 T12: -0.5828 REMARK 3 T13: 0.3392 T23: -0.2571 REMARK 3 L TENSOR REMARK 3 L11: 0.2880 L22: 3.0048 REMARK 3 L33: 1.4492 L12: -0.9303 REMARK 3 L13: 0.6462 L23: -2.0866 REMARK 3 S TENSOR REMARK 3 S11: -0.2260 S12: -0.0864 S13: -0.3319 REMARK 3 S21: 0.6696 S22: 0.3249 S23: 0.7966 REMARK 3 S31: -0.0455 S32: -0.7654 S33: -0.0580 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 450 THROUGH 460 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.0122 35.0900 11.7970 REMARK 3 T TENSOR REMARK 3 T11: 0.5611 T22: 1.4211 REMARK 3 T33: 1.0914 T12: -0.3237 REMARK 3 T13: 0.3391 T23: -0.0884 REMARK 3 L TENSOR REMARK 3 L11: 0.5218 L22: 0.3596 REMARK 3 L33: 2.1592 L12: -0.0706 REMARK 3 L13: 0.8501 L23: 0.4055 REMARK 3 S TENSOR REMARK 3 S11: -0.2741 S12: -0.3822 S13: -0.7291 REMARK 3 S21: 0.5351 S22: 0.7341 S23: 1.7351 REMARK 3 S31: 0.2221 S32: -0.8598 S33: -0.4557 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'X' AND (RESID 1 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.4681 17.0971 -3.7584 REMARK 3 T TENSOR REMARK 3 T11: 1.5269 T22: 0.3793 REMARK 3 T33: 1.5135 T12: -0.1604 REMARK 3 T13: -0.0244 T23: -0.1892 REMARK 3 L TENSOR REMARK 3 L11: 0.4233 L22: 3.7083 REMARK 3 L33: 0.2806 L12: -0.9636 REMARK 3 L13: 0.2855 L23: -0.6372 REMARK 3 S TENSOR REMARK 3 S11: 0.1600 S12: 0.0275 S13: -0.0377 REMARK 3 S21: -0.1937 S22: -0.1978 S23: -0.0403 REMARK 3 S31: 0.0589 S32: -0.0529 S33: 0.0235 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'X' AND (RESID 6 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8826 42.1693 0.6585 REMARK 3 T TENSOR REMARK 3 T11: 0.5608 T22: 0.3456 REMARK 3 T33: 0.7257 T12: -0.4722 REMARK 3 T13: 0.0267 T23: -0.1456 REMARK 3 L TENSOR REMARK 3 L11: 1.4868 L22: 1.3635 REMARK 3 L33: 1.1363 L12: 0.4403 REMARK 3 L13: 0.0974 L23: 0.4998 REMARK 3 S TENSOR REMARK 3 S11: 0.0033 S12: -0.2465 S13: -0.3565 REMARK 3 S21: 0.0396 S22: -0.1832 S23: 0.2687 REMARK 3 S31: 0.3490 S32: -0.3251 S33: -0.0237 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'Y' AND (RESID 1 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.9810 55.0400 4.9318 REMARK 3 T TENSOR REMARK 3 T11: 0.4674 T22: 0.1044 REMARK 3 T33: 0.4236 T12: 0.0351 REMARK 3 T13: -0.0970 T23: -0.1090 REMARK 3 L TENSOR REMARK 3 L11: 3.6384 L22: 4.0028 REMARK 3 L33: 3.7322 L12: -0.3096 REMARK 3 L13: -1.2042 L23: 2.1347 REMARK 3 S TENSOR REMARK 3 S11: 0.0433 S12: 0.0327 S13: 0.4257 REMARK 3 S21: -0.3266 S22: -0.1909 S23: 0.2659 REMARK 3 S31: 0.1278 S32: -0.2731 S33: 0.1573 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'Y' AND (RESID 6 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.3049 29.2553 0.3418 REMARK 3 T TENSOR REMARK 3 T11: 1.1853 T22: 0.4341 REMARK 3 T33: 0.9301 T12: -0.4032 REMARK 3 T13: 0.2047 T23: -0.1826 REMARK 3 L TENSOR REMARK 3 L11: 1.8193 L22: 4.9372 REMARK 3 L33: 0.1790 L12: 1.0317 REMARK 3 L13: 0.0704 L23: -0.8317 REMARK 3 S TENSOR REMARK 3 S11: 0.0727 S12: -0.1550 S13: -0.7258 REMARK 3 S21: 0.2561 S22: -0.2227 S23: -0.7352 REMARK 3 S31: 0.5696 S32: -0.1889 S33: 0.1135 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7N5U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1000257295. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4830 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.850 REMARK 200 RESOLUTION RANGE LOW (A) : 40.110 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 79.5 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 22.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 1.06000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4% TACSIMATE, PH 5.0, 12% PEG3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 31.69000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.80300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.69000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.80300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, X, Y REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 704 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 365 REMARK 465 PRO A 366 REMARK 465 LEU A 367 REMARK 465 GLY A 368 REMARK 465 SER A 369 REMARK 465 GLN A 370 REMARK 465 LYS A 371 REMARK 465 VAL A 372 REMARK 465 GLU A 373 REMARK 465 LYS A 374 REMARK 465 LYS A 375 REMARK 465 ILE A 376 REMARK 465 ARG A 377 REMARK 465 ALA A 378 REMARK 465 THR A 461 REMARK 465 GLY A 462 REMARK 465 LEU A 463 REMARK 465 ARG A 464 REMARK 465 PRO A 465 REMARK 465 TYR A 466 REMARK 465 GLN A 467 REMARK 465 CYS A 468 REMARK 465 ASP A 469 REMARK 465 SER A 470 REMARK 465 CYS A 471 REMARK 465 CYS A 472 REMARK 465 LYS A 473 REMARK 465 THR A 474 REMARK 465 PHE A 475 REMARK 465 VAL A 476 REMARK 465 ARG A 477 REMARK 465 SER A 478 REMARK 465 ASP A 479 REMARK 465 HIS A 480 REMARK 465 LEU A 481 REMARK 465 HIS A 482 REMARK 465 ARG A 483 REMARK 465 HIS A 484 REMARK 465 LEU A 485 REMARK 465 LYS A 486 REMARK 465 LYS A 487 REMARK 465 ASP A 488 REMARK 465 GLY A 489 REMARK 465 CYS A 490 REMARK 465 ASN A 491 REMARK 465 GLY A 492 REMARK 465 VAL A 493 REMARK 465 PRO A 494 REMARK 465 SER A 495 REMARK 465 ARG A 496 REMARK 465 ARG A 497 REMARK 465 GLY A 498 REMARK 465 ARG A 499 REMARK 465 LYS A 500 REMARK 465 LEU A 501 REMARK 465 GLU A 502 REMARK 465 ARG A 503 REMARK 465 PRO A 504 REMARK 465 HIS A 505 REMARK 465 ARG A 506 REMARK 465 ASP A 507 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 379 CG CD CE NZ REMARK 470 LYS A 383 CG CD CE NZ REMARK 470 ASN A 413 CG OD1 ND2 REMARK 470 THR A 433 OG1 CG2 REMARK 470 LYS A 436 CG CD CE NZ REMARK 470 LEU A 439 CG CD1 CD2 REMARK 470 GLN A 441 CG CD OE1 NE2 REMARK 470 GLN A 442 CG CD OE1 NE2 REMARK 470 MET A 457 CG SD CE REMARK 470 ARG A 458 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 459 CG1 CG2 REMARK 470 DT Y 16 O3' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 388 12.52 57.76 REMARK 500 ILE A 414 -61.02 -94.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 602 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 384 SG REMARK 620 2 CYS A 387 SG 95.7 REMARK 620 3 HIS A 400 NE2 88.1 100.6 REMARK 620 4 HIS A 404 NE2 144.3 102.9 117.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 412 SG REMARK 620 2 CYS A 415 SG 100.1 REMARK 620 3 HIS A 428 NE2 94.6 83.7 REMARK 620 4 HIS A 432 NE2 118.3 126.2 125.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 603 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 440 SG REMARK 620 2 CYS A 443 SG 98.8 REMARK 620 3 HIS A 456 NE2 126.6 88.3 REMARK 620 4 HIS A 460 NE2 132.3 106.5 94.5 REMARK 620 N 1 2 3 DBREF 7N5U A 369 500 UNP O95365 ZBT7A_HUMAN 369 500 DBREF 7N5U X 1 16 PDB 7N5U 7N5U 1 16 DBREF 7N5U Y 1 16 PDB 7N5U 7N5U 1 16 SEQADV 7N5U GLY A 365 UNP O95365 EXPRESSION TAG SEQADV 7N5U PRO A 366 UNP O95365 EXPRESSION TAG SEQADV 7N5U LEU A 367 UNP O95365 EXPRESSION TAG SEQADV 7N5U GLY A 368 UNP O95365 EXPRESSION TAG SEQADV 7N5U LEU A 501 UNP O95365 EXPRESSION TAG SEQADV 7N5U GLU A 502 UNP O95365 EXPRESSION TAG SEQADV 7N5U ARG A 503 UNP O95365 EXPRESSION TAG SEQADV 7N5U PRO A 504 UNP O95365 EXPRESSION TAG SEQADV 7N5U HIS A 505 UNP O95365 EXPRESSION TAG SEQADV 7N5U ARG A 506 UNP O95365 EXPRESSION TAG SEQADV 7N5U ASP A 507 UNP O95365 EXPRESSION TAG SEQRES 1 A 143 GLY PRO LEU GLY SER GLN LYS VAL GLU LYS LYS ILE ARG SEQRES 2 A 143 ALA LYS ALA PHE GLN LYS CYS PRO ILE CYS GLU LYS VAL SEQRES 3 A 143 ILE GLN GLY ALA GLY LYS LEU PRO ARG HIS ILE ARG THR SEQRES 4 A 143 HIS THR GLY GLU LYS PRO TYR GLU CYS ASN ILE CYS LYS SEQRES 5 A 143 VAL ARG PHE THR ARG GLN ASP LYS LEU LYS VAL HIS MET SEQRES 6 A 143 ARG LYS HIS THR GLY GLU LYS PRO TYR LEU CYS GLN GLN SEQRES 7 A 143 CYS GLY ALA ALA PHE ALA HIS ASN TYR ASP LEU LYS ASN SEQRES 8 A 143 HIS MET ARG VAL HIS THR GLY LEU ARG PRO TYR GLN CYS SEQRES 9 A 143 ASP SER CYS CYS LYS THR PHE VAL ARG SER ASP HIS LEU SEQRES 10 A 143 HIS ARG HIS LEU LYS LYS ASP GLY CYS ASN GLY VAL PRO SEQRES 11 A 143 SER ARG ARG GLY ARG LYS LEU GLU ARG PRO HIS ARG ASP SEQRES 1 X 16 DC DA DA DA DC DA DT DC DA DA DG DG DG SEQRES 2 X 16 DT DC DC SEQRES 1 Y 16 DG DG DG DA DC DC DC DT DT DG DA DT DG SEQRES 2 Y 16 DT DT DT HET ZN A 601 1 HET ZN A 602 1 HET ZN A 603 1 HETNAM ZN ZINC ION FORMUL 4 ZN 3(ZN 2+) FORMUL 7 HOH *7(H2 O) HELIX 1 AA1 LYS A 396 GLY A 406 1 11 HELIX 2 AA2 ARG A 421 THR A 433 1 13 HELIX 3 AA3 HIS A 449 HIS A 460 1 12 SHEET 1 AA1 2 PHE A 381 LYS A 383 0 SHEET 2 AA1 2 VAL A 390 GLN A 392 -1 O ILE A 391 N GLN A 382 SHEET 1 AA2 2 TYR A 410 GLU A 411 0 SHEET 2 AA2 2 ARG A 418 PHE A 419 -1 O PHE A 419 N TYR A 410 SHEET 1 AA3 2 TYR A 438 LEU A 439 0 SHEET 2 AA3 2 ALA A 446 PHE A 447 -1 O PHE A 447 N TYR A 438 LINK SG CYS A 384 ZN ZN A 602 1555 1555 2.32 LINK SG CYS A 387 ZN ZN A 602 1555 1555 2.30 LINK NE2 HIS A 400 ZN ZN A 602 1555 1555 2.08 LINK NE2 HIS A 404 ZN ZN A 602 1555 1555 1.99 LINK SG CYS A 412 ZN ZN A 601 1555 1555 2.30 LINK SG CYS A 415 ZN ZN A 601 1555 1555 2.29 LINK NE2 HIS A 428 ZN ZN A 601 1555 1555 2.03 LINK NE2 HIS A 432 ZN ZN A 601 1555 1555 2.03 LINK SG CYS A 440 ZN ZN A 603 1555 1555 2.39 LINK SG CYS A 443 ZN ZN A 603 1555 1555 2.35 LINK NE2 HIS A 456 ZN ZN A 603 1555 1555 2.04 LINK NE2 HIS A 460 ZN ZN A 603 1555 1555 2.05 CRYST1 63.380 103.606 37.073 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015778 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009652 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026974 0.00000