HEADER ANTIVIRAL PROTEIN 10-JUN-21 7N7I TITLE X-RAY CRYSTAL STRUCTURE OF VIPERIN-LIKE ENZYME FROM TRICHODERMA VIRENS COMPND MOL_ID: 1; COMPND 2 MOLECULE: VIPERIN-LIKE ENZYME; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: ELP3 DOMAIN-CONTAINING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HYPOCREA VIRENS (STRAIN GV29-8 / FGSC 10586); SOURCE 3 ORGANISM_COMMON: GLIOCLADIUM VIRENS, TRICHODERMA VIRENS; SOURCE 4 ORGANISM_TAXID: 413071; SOURCE 5 STRAIN: GV29-8 / FGSC 10586; SOURCE 6 GENE: TRIVIDRAFT_58105; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS RADICAL SAM PROTEIN, METALLOPROTEIN, ANTIVIRAL, DDH-SYNTHASE, KEYWDS 2 ANTIVIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.L.GROVE,S.C.ALMO,J.B.BONANNO,J.C.LACHOWICZ,A.G.GIZZI REVDAT 3 18-OCT-23 7N7I 1 REMARK REVDAT 2 28-JUL-21 7N7I 1 JRNL REVDAT 1 30-JUN-21 7N7I 0 JRNL AUTH J.C.LACHOWICZ,A.S.GIZZI,S.C.ALMO,T.L.GROVE JRNL TITL STRUCTURAL INSIGHT INTO THE SUBSTRATE SCOPE OF VIPERIN AND JRNL TITL 2 VIPERIN-LIKE ENZYMES FROM THREE DOMAINS OF LIFE. JRNL REF BIOCHEMISTRY V. 60 2116 2021 JRNL REFN ISSN 0006-2960 JRNL PMID 34156827 JRNL DOI 10.1021/ACS.BIOCHEM.0C00958 REMARK 2 REMARK 2 RESOLUTION. 3.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.110 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 15195 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1474 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.1400 - 7.0600 1.00 2651 120 0.1632 0.1631 REMARK 3 2 7.0500 - 5.6200 1.00 2664 144 0.2018 0.1986 REMARK 3 3 5.6200 - 4.9100 1.00 2673 136 0.1949 0.2722 REMARK 3 4 4.9100 - 4.4700 1.00 2698 88 0.1871 0.2186 REMARK 3 5 4.4700 - 4.1500 1.00 2594 148 0.1969 0.2142 REMARK 3 6 4.1400 - 3.9000 1.00 2657 108 0.2232 0.2344 REMARK 3 7 3.9000 - 3.7100 1.00 2671 132 0.2578 0.3118 REMARK 3 8 3.7100 - 3.5500 1.00 2692 140 0.2790 0.3012 REMARK 3 9 3.5500 - 3.4100 1.00 2658 144 0.2949 0.3276 REMARK 3 10 3.4100 - 3.2900 1.00 2546 176 0.3201 0.3574 REMARK 3 11 3.2900 - 3.1900 0.86 2295 138 0.3306 0.3894 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.470 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 2529 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN C REMARK 3 ATOM PAIRS NUMBER : 2529 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7N7I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1000257465. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9893 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15361 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.190 REMARK 200 RESOLUTION RANGE LOW (A) : 28.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 10.30 REMARK 200 R MERGE (I) : 0.20000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.9 REMARK 200 DATA REDUNDANCY IN SHELL : 9.70 REMARK 200 R MERGE FOR SHELL (I) : 1.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5VSL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL, PH 8.5, 0.2 M SODIUM REMARK 280 CHLORIDE, 25% (W/V) PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.23933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 74.47867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 ASP A 3 REMARK 465 ASN A 4 REMARK 465 GLN A 5 REMARK 465 GLU A 6 REMARK 465 ALA A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 PHE A 10 REMARK 465 GLY A 11 REMARK 465 GLY A 12 REMARK 465 ARG A 13 REMARK 465 VAL A 14 REMARK 465 ARG A 15 REMARK 465 THR A 16 REMARK 465 GLY A 17 REMARK 465 GLY A 142 REMARK 465 ASP A 143 REMARK 465 CYS A 299 REMARK 465 SER A 300 REMARK 465 SER A 301 REMARK 465 ASP A 302 REMARK 465 SER A 303 REMARK 465 LYS A 304 REMARK 465 ASP A 305 REMARK 465 LEU A 306 REMARK 465 GLU A 307 REMARK 465 TRP A 308 REMARK 465 MET B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 SER B -14 REMARK 465 SER B -13 REMARK 465 GLY B -12 REMARK 465 VAL B -11 REMARK 465 ASP B -10 REMARK 465 LEU B -9 REMARK 465 GLY B -8 REMARK 465 THR B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 ASP B 3 REMARK 465 ASN B 4 REMARK 465 GLN B 5 REMARK 465 GLU B 6 REMARK 465 ALA B 7 REMARK 465 ALA B 8 REMARK 465 ALA B 9 REMARK 465 PHE B 10 REMARK 465 GLY B 11 REMARK 465 GLY B 12 REMARK 465 ARG B 13 REMARK 465 VAL B 14 REMARK 465 ARG B 15 REMARK 465 THR B 16 REMARK 465 GLY B 17 REMARK 465 GLY B 142 REMARK 465 ASP B 143 REMARK 465 CYS B 299 REMARK 465 SER B 300 REMARK 465 SER B 301 REMARK 465 ASP B 302 REMARK 465 SER B 303 REMARK 465 LYS B 304 REMARK 465 ASP B 305 REMARK 465 LEU B 306 REMARK 465 GLU B 307 REMARK 465 TRP B 308 REMARK 465 MET C -21 REMARK 465 HIS C -20 REMARK 465 HIS C -19 REMARK 465 HIS C -18 REMARK 465 HIS C -17 REMARK 465 HIS C -16 REMARK 465 HIS C -15 REMARK 465 SER C -14 REMARK 465 SER C -13 REMARK 465 GLY C -12 REMARK 465 VAL C -11 REMARK 465 ASP C -10 REMARK 465 LEU C -9 REMARK 465 GLY C -8 REMARK 465 THR C -7 REMARK 465 GLU C -6 REMARK 465 ASN C -5 REMARK 465 LEU C -4 REMARK 465 TYR C -3 REMARK 465 PHE C -2 REMARK 465 GLN C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 LYS C 2 REMARK 465 ASP C 3 REMARK 465 ASN C 4 REMARK 465 GLN C 5 REMARK 465 GLU C 6 REMARK 465 ALA C 7 REMARK 465 ALA C 8 REMARK 465 ALA C 9 REMARK 465 PHE C 10 REMARK 465 GLY C 11 REMARK 465 GLY C 12 REMARK 465 ARG C 13 REMARK 465 VAL C 14 REMARK 465 ARG C 15 REMARK 465 THR C 16 REMARK 465 GLY C 17 REMARK 465 GLY C 142 REMARK 465 ASP C 143 REMARK 465 CYS C 299 REMARK 465 SER C 300 REMARK 465 SER C 301 REMARK 465 ASP C 302 REMARK 465 SER C 303 REMARK 465 LYS C 304 REMARK 465 ASP C 305 REMARK 465 LEU C 306 REMARK 465 GLU C 307 REMARK 465 TRP C 308 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 18 CG CD OE1 NE2 REMARK 470 GLN A 146 CG CD OE1 NE2 REMARK 470 GLN B 18 CG CD OE1 NE2 REMARK 470 GLN B 146 CG CD OE1 NE2 REMARK 470 GLN C 18 CG CD OE1 NE2 REMARK 470 GLN C 146 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS B 190 OE2 GLU B 236 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 71 -146.63 -123.54 REMARK 500 ASN A 201 40.14 -149.40 REMARK 500 PRO A 237 -176.86 -66.59 REMARK 500 ALA B 71 -146.75 -123.14 REMARK 500 GLN B 185 65.82 60.13 REMARK 500 ILE B 196 77.97 -110.76 REMARK 500 ASN B 201 41.19 -148.09 REMARK 500 PRO B 237 -178.54 -65.96 REMARK 500 ALA C 71 -147.56 -121.64 REMARK 500 GLN C 185 64.02 60.41 REMARK 500 ILE C 196 77.66 -113.19 REMARK 500 ASN C 201 40.71 -149.10 REMARK 500 PRO C 237 -177.24 -67.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 402 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SAM A 401 N REMARK 620 2 SF4 A 402 S1 77.3 REMARK 620 3 SF4 A 402 S3 95.1 104.2 REMARK 620 4 SF4 A 402 S4 159.6 104.2 104.1 REMARK 620 5 SAM A 401 OXT 62.7 139.4 87.1 110.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 402 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SAM B 401 N REMARK 620 2 SF4 B 402 S1 87.8 REMARK 620 3 SF4 B 402 S3 92.2 104.2 REMARK 620 4 SF4 B 402 S4 156.4 104.2 104.1 REMARK 620 5 SAM B 401 OXT 61.9 149.3 82.8 102.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 C 402 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SAM C 401 OXT REMARK 620 2 SF4 C 402 S1 125.6 REMARK 620 3 SF4 C 402 S3 88.0 104.1 REMARK 620 4 SF4 C 402 S4 124.2 104.2 104.1 REMARK 620 N 1 2 3 DBREF 7N7I A 1 308 UNP G9MQB8 G9MQB8_HYPVG 1 308 DBREF 7N7I B 1 308 UNP G9MQB8 G9MQB8_HYPVG 1 308 DBREF 7N7I C 1 308 UNP G9MQB8 G9MQB8_HYPVG 1 308 SEQADV 7N7I MET A -21 UNP G9MQB8 INITIATING METHIONINE SEQADV 7N7I HIS A -20 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS A -19 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS A -18 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS A -17 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS A -16 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS A -15 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I SER A -14 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I SER A -13 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I GLY A -12 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I VAL A -11 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I ASP A -10 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I LEU A -9 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I GLY A -8 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I THR A -7 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I GLU A -6 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I ASN A -5 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I LEU A -4 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I TYR A -3 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I PHE A -2 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I GLN A -1 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I SER A 0 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I MET B -21 UNP G9MQB8 INITIATING METHIONINE SEQADV 7N7I HIS B -20 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS B -19 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS B -18 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS B -17 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS B -16 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS B -15 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I SER B -14 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I SER B -13 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I GLY B -12 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I VAL B -11 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I ASP B -10 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I LEU B -9 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I GLY B -8 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I THR B -7 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I GLU B -6 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I ASN B -5 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I LEU B -4 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I TYR B -3 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I PHE B -2 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I GLN B -1 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I SER B 0 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I MET C -21 UNP G9MQB8 INITIATING METHIONINE SEQADV 7N7I HIS C -20 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS C -19 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS C -18 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS C -17 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS C -16 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I HIS C -15 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I SER C -14 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I SER C -13 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I GLY C -12 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I VAL C -11 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I ASP C -10 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I LEU C -9 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I GLY C -8 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I THR C -7 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I GLU C -6 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I ASN C -5 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I LEU C -4 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I TYR C -3 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I PHE C -2 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I GLN C -1 UNP G9MQB8 EXPRESSION TAG SEQADV 7N7I SER C 0 UNP G9MQB8 EXPRESSION TAG SEQRES 1 A 330 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 330 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS ASP ASN SEQRES 3 A 330 GLN GLU ALA ALA ALA PHE GLY GLY ARG VAL ARG THR GLY SEQRES 4 A 330 GLN VAL PRO VAL SER VAL ASN TYR HIS PHE SER ARG LYS SEQRES 5 A 330 CYS ASN LYS GLU CYS LEU PHE CYS PHE HIS THR ALA THR SEQRES 6 A 330 THR SER HIS VAL GLU LYS PRO GLU ASN ALA LYS ARG GLY SEQRES 7 A 330 LEU THR LEU LEU LYS GLN ALA GLY MET LYS LYS ILE ASN SEQRES 8 A 330 PHE ALA GLY GLY GLU PRO PHE LEU TYR PRO LYS PHE LEU SEQRES 9 A 330 GLY GLU MET ILE ASP PHE CYS LYS GLU THR LEU GLN LEU SEQRES 10 A 330 GLU SER VAL SER ILE VAL THR ASN GLY SER LEU VAL LYS SEQRES 11 A 330 GLU GLN PHE LEU GLN LYS HIS GLY ARG ASN ILE ASP ILE SEQRES 12 A 330 LEU ALA VAL SER CYS ASP SER PHE ASN GLU ALA THR ASN SEQRES 13 A 330 ILE LYS ILE GLY ARG GLY SER GLY ASP ASN VAL GLN LYS SEQRES 14 A 330 LEU TYR GLU ILE GLY SER TRP CYS GLN LYS TYR ASP ILE SEQRES 15 A 330 LYS PHE LYS LEU ASN THR VAL VAL ASN LYS PHE ASN HIS SEQRES 16 A 330 LEU GLU ASP MET ASN ASP HIS LEU ASN ALA LEU GLN PRO SEQRES 17 A 330 PHE ARG TRP LYS CYS PHE GLN VAL LEU ILE VAL THR GLY SEQRES 18 A 330 GLU ASN ASP SER ASP LYS THR LEU ARG ASN ALA HIS SER SEQRES 19 A 330 LEU THR ILE SER ASP ASP GLU PHE ASP ARG PHE CYS GLU SEQRES 20 A 330 ARG HIS SER SER GLN THR CYS LEU VAL PRO GLU PRO ASN SEQRES 21 A 330 ARG LEU MET ALA LYS SER TYR LEU ILE LEU ASP GLU TYR SEQRES 22 A 330 MET ARG PHE LEU ASP ARG ASN GLY GLN GLN PRO SER LYS SEQRES 23 A 330 SER ILE LEU GLU VAL GLY VAL GLN GLN ALA LEU GLN ALA SEQRES 24 A 330 VAL PHE TRP ASP GLU GLU ALA PHE VAL GLU ARG GLY GLY SEQRES 25 A 330 ILE TYR ASP TRP ASN LYS SER SER CYS SER SER ASP SER SEQRES 26 A 330 LYS ASP LEU GLU TRP SEQRES 1 B 330 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 330 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS ASP ASN SEQRES 3 B 330 GLN GLU ALA ALA ALA PHE GLY GLY ARG VAL ARG THR GLY SEQRES 4 B 330 GLN VAL PRO VAL SER VAL ASN TYR HIS PHE SER ARG LYS SEQRES 5 B 330 CYS ASN LYS GLU CYS LEU PHE CYS PHE HIS THR ALA THR SEQRES 6 B 330 THR SER HIS VAL GLU LYS PRO GLU ASN ALA LYS ARG GLY SEQRES 7 B 330 LEU THR LEU LEU LYS GLN ALA GLY MET LYS LYS ILE ASN SEQRES 8 B 330 PHE ALA GLY GLY GLU PRO PHE LEU TYR PRO LYS PHE LEU SEQRES 9 B 330 GLY GLU MET ILE ASP PHE CYS LYS GLU THR LEU GLN LEU SEQRES 10 B 330 GLU SER VAL SER ILE VAL THR ASN GLY SER LEU VAL LYS SEQRES 11 B 330 GLU GLN PHE LEU GLN LYS HIS GLY ARG ASN ILE ASP ILE SEQRES 12 B 330 LEU ALA VAL SER CYS ASP SER PHE ASN GLU ALA THR ASN SEQRES 13 B 330 ILE LYS ILE GLY ARG GLY SER GLY ASP ASN VAL GLN LYS SEQRES 14 B 330 LEU TYR GLU ILE GLY SER TRP CYS GLN LYS TYR ASP ILE SEQRES 15 B 330 LYS PHE LYS LEU ASN THR VAL VAL ASN LYS PHE ASN HIS SEQRES 16 B 330 LEU GLU ASP MET ASN ASP HIS LEU ASN ALA LEU GLN PRO SEQRES 17 B 330 PHE ARG TRP LYS CYS PHE GLN VAL LEU ILE VAL THR GLY SEQRES 18 B 330 GLU ASN ASP SER ASP LYS THR LEU ARG ASN ALA HIS SER SEQRES 19 B 330 LEU THR ILE SER ASP ASP GLU PHE ASP ARG PHE CYS GLU SEQRES 20 B 330 ARG HIS SER SER GLN THR CYS LEU VAL PRO GLU PRO ASN SEQRES 21 B 330 ARG LEU MET ALA LYS SER TYR LEU ILE LEU ASP GLU TYR SEQRES 22 B 330 MET ARG PHE LEU ASP ARG ASN GLY GLN GLN PRO SER LYS SEQRES 23 B 330 SER ILE LEU GLU VAL GLY VAL GLN GLN ALA LEU GLN ALA SEQRES 24 B 330 VAL PHE TRP ASP GLU GLU ALA PHE VAL GLU ARG GLY GLY SEQRES 25 B 330 ILE TYR ASP TRP ASN LYS SER SER CYS SER SER ASP SER SEQRES 26 B 330 LYS ASP LEU GLU TRP SEQRES 1 C 330 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 C 330 GLY THR GLU ASN LEU TYR PHE GLN SER MET LYS ASP ASN SEQRES 3 C 330 GLN GLU ALA ALA ALA PHE GLY GLY ARG VAL ARG THR GLY SEQRES 4 C 330 GLN VAL PRO VAL SER VAL ASN TYR HIS PHE SER ARG LYS SEQRES 5 C 330 CYS ASN LYS GLU CYS LEU PHE CYS PHE HIS THR ALA THR SEQRES 6 C 330 THR SER HIS VAL GLU LYS PRO GLU ASN ALA LYS ARG GLY SEQRES 7 C 330 LEU THR LEU LEU LYS GLN ALA GLY MET LYS LYS ILE ASN SEQRES 8 C 330 PHE ALA GLY GLY GLU PRO PHE LEU TYR PRO LYS PHE LEU SEQRES 9 C 330 GLY GLU MET ILE ASP PHE CYS LYS GLU THR LEU GLN LEU SEQRES 10 C 330 GLU SER VAL SER ILE VAL THR ASN GLY SER LEU VAL LYS SEQRES 11 C 330 GLU GLN PHE LEU GLN LYS HIS GLY ARG ASN ILE ASP ILE SEQRES 12 C 330 LEU ALA VAL SER CYS ASP SER PHE ASN GLU ALA THR ASN SEQRES 13 C 330 ILE LYS ILE GLY ARG GLY SER GLY ASP ASN VAL GLN LYS SEQRES 14 C 330 LEU TYR GLU ILE GLY SER TRP CYS GLN LYS TYR ASP ILE SEQRES 15 C 330 LYS PHE LYS LEU ASN THR VAL VAL ASN LYS PHE ASN HIS SEQRES 16 C 330 LEU GLU ASP MET ASN ASP HIS LEU ASN ALA LEU GLN PRO SEQRES 17 C 330 PHE ARG TRP LYS CYS PHE GLN VAL LEU ILE VAL THR GLY SEQRES 18 C 330 GLU ASN ASP SER ASP LYS THR LEU ARG ASN ALA HIS SER SEQRES 19 C 330 LEU THR ILE SER ASP ASP GLU PHE ASP ARG PHE CYS GLU SEQRES 20 C 330 ARG HIS SER SER GLN THR CYS LEU VAL PRO GLU PRO ASN SEQRES 21 C 330 ARG LEU MET ALA LYS SER TYR LEU ILE LEU ASP GLU TYR SEQRES 22 C 330 MET ARG PHE LEU ASP ARG ASN GLY GLN GLN PRO SER LYS SEQRES 23 C 330 SER ILE LEU GLU VAL GLY VAL GLN GLN ALA LEU GLN ALA SEQRES 24 C 330 VAL PHE TRP ASP GLU GLU ALA PHE VAL GLU ARG GLY GLY SEQRES 25 C 330 ILE TYR ASP TRP ASN LYS SER SER CYS SER SER ASP SER SEQRES 26 C 330 LYS ASP LEU GLU TRP HET SAM A 401 27 HET SF4 A 402 8 HET UTP A 403 29 HET SAM B 401 27 HET SF4 B 402 8 HET UTP B 403 29 HET SAM C 401 27 HET SF4 C 402 8 HET UTP C 403 29 HETNAM SAM S-ADENOSYLMETHIONINE HETNAM SF4 IRON/SULFUR CLUSTER HETNAM UTP URIDINE 5'-TRIPHOSPHATE FORMUL 4 SAM 3(C15 H22 N6 O5 S) FORMUL 5 SF4 3(FE4 S4) FORMUL 6 UTP 3(C9 H15 N2 O15 P3) HELIX 1 AA1 LYS A 49 GLY A 64 1 16 HELIX 2 AA2 GLU A 74 LEU A 77 5 4 HELIX 3 AA3 TYR A 78 THR A 92 1 15 HELIX 4 AA4 LYS A 108 GLY A 116 1 9 HELIX 5 AA5 ARG A 117 ILE A 119 5 3 HELIX 6 AA6 ASN A 130 GLY A 138 1 9 HELIX 7 AA7 VAL A 145 TYR A 158 1 14 HELIX 8 AA8 MET A 177 GLN A 185 1 9 HELIX 9 AA9 ALA A 210 THR A 214 5 5 HELIX 10 AB1 SER A 216 HIS A 227 1 12 HELIX 11 AB2 PRO A 237 ALA A 242 1 6 HELIX 12 AB3 GLY A 270 ALA A 277 1 8 HELIX 13 AB4 ASP A 281 ARG A 288 1 8 HELIX 14 AB5 LYS B 49 ALA B 63 1 15 HELIX 15 AB6 GLU B 74 LEU B 77 5 4 HELIX 16 AB7 TYR B 78 THR B 92 1 15 HELIX 17 AB8 LYS B 108 GLY B 116 1 9 HELIX 18 AB9 ASN B 130 GLY B 138 1 9 HELIX 19 AC1 VAL B 145 TYR B 158 1 14 HELIX 20 AC2 MET B 177 GLN B 185 1 9 HELIX 21 AC3 ALA B 210 THR B 214 5 5 HELIX 22 AC4 SER B 216 HIS B 227 1 12 HELIX 23 AC5 PRO B 237 ALA B 242 1 6 HELIX 24 AC6 GLY B 270 ALA B 277 1 8 HELIX 25 AC7 ASP B 281 ARG B 288 1 8 HELIX 26 AC8 LYS C 49 GLY C 64 1 16 HELIX 27 AC9 GLU C 74 LEU C 77 5 4 HELIX 28 AD1 TYR C 78 THR C 92 1 15 HELIX 29 AD2 LYS C 108 GLY C 116 1 9 HELIX 30 AD3 ARG C 117 ILE C 119 5 3 HELIX 31 AD4 ASN C 130 GLY C 138 1 9 HELIX 32 AD5 VAL C 145 TYR C 158 1 14 HELIX 33 AD6 MET C 177 GLN C 185 1 9 HELIX 34 AD7 ALA C 210 THR C 214 5 5 HELIX 35 AD8 SER C 216 HIS C 227 1 12 HELIX 36 AD9 PRO C 237 ALA C 242 1 6 HELIX 37 AE1 SER C 265 GLY C 270 1 6 HELIX 38 AE2 GLY C 270 ALA C 277 1 8 HELIX 39 AE3 ASP C 281 ARG C 288 1 8 SHEET 1 AA1 8 LEU A 233 GLU A 236 0 SHEET 2 AA1 8 ARG A 188 GLN A 193 1 N TRP A 189 O VAL A 234 SHEET 3 AA1 8 LYS A 161 VAL A 168 1 N VAL A 168 O PHE A 192 SHEET 4 AA1 8 ILE A 121 VAL A 124 1 N LEU A 122 O LYS A 161 SHEET 5 AA1 8 SER A 97 THR A 102 1 N ILE A 100 O ALA A 123 SHEET 6 AA1 8 LYS A 67 GLY A 72 1 N ILE A 68 O SER A 99 SHEET 7 AA1 8 SER A 22 SER A 28 1 N TYR A 25 O ASN A 69 SHEET 8 AA1 8 ILE A 247 LEU A 248 1 O LEU A 248 N ASN A 24 SHEET 1 AA2 8 LEU B 233 GLU B 236 0 SHEET 2 AA2 8 ARG B 188 GLN B 193 1 N GLN B 193 O GLU B 236 SHEET 3 AA2 8 LYS B 161 VAL B 168 1 N VAL B 168 O PHE B 192 SHEET 4 AA2 8 ILE B 121 VAL B 124 1 N LEU B 122 O LYS B 161 SHEET 5 AA2 8 SER B 97 THR B 102 1 N THR B 102 O ALA B 123 SHEET 6 AA2 8 LYS B 67 GLY B 72 1 N ILE B 68 O SER B 99 SHEET 7 AA2 8 SER B 22 SER B 28 1 N TYR B 25 O ASN B 69 SHEET 8 AA2 8 ILE B 247 LEU B 248 1 O LEU B 248 N ASN B 24 SHEET 1 AA3 8 LEU C 233 GLU C 236 0 SHEET 2 AA3 8 ARG C 188 GLN C 193 1 N TRP C 189 O VAL C 234 SHEET 3 AA3 8 LYS C 161 VAL C 168 1 N VAL C 168 O PHE C 192 SHEET 4 AA3 8 ILE C 121 VAL C 124 1 N LEU C 122 O LYS C 161 SHEET 5 AA3 8 SER C 97 THR C 102 1 N THR C 102 O ALA C 123 SHEET 6 AA3 8 LYS C 67 ALA C 71 1 N ILE C 68 O SER C 99 SHEET 7 AA3 8 SER C 22 HIS C 26 1 N VAL C 23 O ASN C 69 SHEET 8 AA3 8 ILE C 247 LEU C 248 1 O LEU C 248 N ASN C 24 LINK N SAM A 401 FE2 SF4 A 402 1555 1555 2.65 LINK OXT SAM A 401 FE2 SF4 A 402 1555 1555 2.56 LINK N SAM B 401 FE2 SF4 B 402 1555 1555 2.68 LINK OXT SAM B 401 FE2 SF4 B 402 1555 1555 2.59 LINK OXT SAM C 401 FE2 SF4 C 402 1555 1555 2.62 CRYST1 85.943 85.943 111.718 90.00 90.00 120.00 P 31 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011636 0.006718 0.000000 0.00000 SCALE2 0.000000 0.013436 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008951 0.00000