HEADER APOPTOSIS 11-FEB-21 7NHZ TITLE NMR STRUCTURE OF RV1813C FROM MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN RV1813C; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 3 H37RV); SOURCE 4 ORGANISM_TAXID: 83332; SOURCE 5 STRAIN: ATCC 25618 / H37RV; SOURCE 6 GENE: RV1813C, MTCY1A11.30, MTY16F9.01; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS METABOLISM, MITOCHONDRIA, EFFECTOR, APOPTOSIS EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR P.BARTHE,M.COHEN-GONSAUD REVDAT 2 14-JUN-23 7NHZ 1 REMARK REVDAT 1 31-MAR-21 7NHZ 0 JRNL AUTH M.COHEN-GONSAUD,P.BARTHE,G.V.MUKAMOLOVA JRNL TITL A MYCOBACTERIUM TUBERCULOSIS EFFECTOR TARGETS MITOCHONDRION, JRNL TITL 2 CONTROLS ENERGY METABOLISM AND LIMITS CYTOCHROME C EXIT. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RECOORD PROCEDURE REMARK 4 REMARK 4 7NHZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1292113988. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 5.6 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1.0 MM [U-15N] RV1813C, 90% REMARK 210 H2O/10% D2O; 0.9 MM [U-13C; U- REMARK 210 15N] RV1813C, 90% H2O/10% D2O; REMARK 210 0.8 MM RV1813C, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-15N REMARK 210 TOCSY; 3D HNCA; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D HNCO; 3D HNCACO; REMARK 210 2D NOESY; 2D TOCSY; 2D DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, CINDY, GIFA REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 600 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 17 -173.61 58.46 REMARK 500 1 HIS A 47 31.78 72.73 REMARK 500 1 CYS A 67 106.89 -55.85 REMARK 500 1 ARG A 75 -153.78 -125.82 REMARK 500 2 GLU A 14 38.71 -85.05 REMARK 500 2 ARG A 75 -152.33 -98.73 REMARK 500 3 GLU A 14 57.18 -93.80 REMARK 500 3 VAL A 15 -164.22 -111.71 REMARK 500 3 SER A 18 -173.88 -173.38 REMARK 500 3 ARG A 75 -149.80 -135.60 REMARK 500 4 VAL A 15 -172.79 -67.49 REMARK 500 4 MET A 16 92.64 78.52 REMARK 500 4 GLU A 19 80.99 61.44 REMARK 500 4 ARG A 75 -148.83 -121.99 REMARK 500 5 ALA A 5 -87.54 -97.06 REMARK 500 5 HIS A 6 74.16 60.95 REMARK 500 5 GLU A 14 30.36 -93.49 REMARK 500 5 VAL A 15 -165.29 -101.47 REMARK 500 5 CYS A 67 107.90 -47.63 REMARK 500 5 ARG A 75 -150.19 -124.38 REMARK 500 6 THR A 2 127.25 73.20 REMARK 500 6 CYS A 67 106.12 -42.07 REMARK 500 6 ARG A 75 -153.98 -121.46 REMARK 500 7 HIS A 6 86.95 -174.55 REMARK 500 7 MET A 17 -143.86 -95.72 REMARK 500 7 SER A 18 75.56 -67.05 REMARK 500 7 ARG A 75 -155.69 -103.00 REMARK 500 8 ALA A 8 -164.36 -112.60 REMARK 500 8 MET A 16 -162.86 -177.64 REMARK 500 8 SER A 18 -151.91 70.22 REMARK 500 8 GLU A 19 86.94 58.35 REMARK 500 8 VAL A 69 88.84 94.11 REMARK 500 8 ARG A 75 -146.73 -109.15 REMARK 500 9 MET A 16 168.84 76.61 REMARK 500 9 ALA A 21 -170.63 -172.41 REMARK 500 9 HIS A 47 35.01 77.21 REMARK 500 9 ARG A 75 -152.30 -119.95 REMARK 500 10 SER A 11 92.72 -69.40 REMARK 500 10 LEU A 23 164.76 67.17 REMARK 500 10 CYS A 67 95.57 -55.75 REMARK 500 10 VAL A 69 70.20 97.61 REMARK 500 10 ARG A 75 -149.82 -101.56 REMARK 500 11 ILE A 20 95.95 62.10 REMARK 500 11 ARG A 75 -152.53 -116.89 REMARK 500 12 SER A 11 27.72 -76.18 REMARK 500 12 ALA A 21 -173.94 -176.35 REMARK 500 12 ARG A 75 -150.23 -101.81 REMARK 500 13 ALA A 5 -165.11 -127.24 REMARK 500 13 ASN A 9 115.63 66.13 REMARK 500 13 CYS A 67 103.22 -52.64 REMARK 500 REMARK 500 THIS ENTRY HAS 88 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 5 ARG A 72 0.07 SIDE CHAIN REMARK 500 6 ARG A 72 0.08 SIDE CHAIN REMARK 500 6 ARG A 104 0.10 SIDE CHAIN REMARK 500 8 ARG A 72 0.08 SIDE CHAIN REMARK 500 10 ARG A 94 0.08 SIDE CHAIN REMARK 500 16 ARG A 94 0.07 SIDE CHAIN REMARK 500 19 ARG A 94 0.07 SIDE CHAIN REMARK 500 20 ARG A 72 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34602 RELATED DB: BMRB REMARK 900 NMR STRUCTURE OF RV1813C FROM MYCOBACTERIUM TUBERCULOSIS DBREF 7NHZ A 1 116 UNP P9WLS1 Y1813_MYCTU 28 143 SEQADV 7NHZ GLY A -3 UNP P9WLS1 EXPRESSION TAG SEQADV 7NHZ PRO A -2 UNP P9WLS1 EXPRESSION TAG SEQADV 7NHZ HIS A -1 UNP P9WLS1 EXPRESSION TAG SEQADV 7NHZ MET A 0 UNP P9WLS1 EXPRESSION TAG SEQRES 1 A 120 GLY PRO HIS MET PRO THR VAL ASP ALA HIS LEU ALA ASN SEQRES 2 A 120 GLY SER MET SER GLU VAL MET MET SER GLU ILE ALA GLY SEQRES 3 A 120 LEU PRO ILE PRO PRO ILE ILE HIS TYR GLY ALA ILE ALA SEQRES 4 A 120 TYR ALA PRO SER GLY ALA SER GLY LYS ALA TRP HIS GLN SEQRES 5 A 120 ARG THR PRO ALA ARG ALA GLU GLN VAL ALA LEU GLU LYS SEQRES 6 A 120 CYS GLY ASP LYS THR CYS LYS VAL VAL SER ARG PHE THR SEQRES 7 A 120 ARG CYS GLY ALA VAL ALA TYR ASN GLY SER LYS TYR GLN SEQRES 8 A 120 GLY GLY THR GLY LEU THR ARG ARG ALA ALA GLU ASP ASP SEQRES 9 A 120 ALA VAL ASN ARG LEU GLU GLY GLY ARG ILE VAL ASN TRP SEQRES 10 A 120 ALA CYS ASN HELIX 1 AA1 THR A 50 GLY A 63 1 14 HELIX 2 AA2 THR A 93 LEU A 105 1 13 SHEET 1 AA1 3 ALA A 41 GLN A 48 0 SHEET 2 AA1 3 TYR A 31 ALA A 37 -1 N ALA A 33 O ALA A 45 SHEET 3 AA1 3 SER A 71 PHE A 73 -1 O SER A 71 N ILE A 34 SHEET 1 AA2 3 LYS A 85 GLY A 91 0 SHEET 2 AA2 3 CYS A 76 ASN A 82 -1 N ALA A 78 O GLY A 89 SHEET 3 AA2 3 ARG A 109 CYS A 115 -1 O ALA A 114 N GLY A 77 SSBOND 1 CYS A 62 CYS A 67 1555 1555 2.03 SSBOND 2 CYS A 76 CYS A 115 1555 1555 2.04 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1