data_7NJC # _entry.id 7NJC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7NJC pdb_00007njc 10.2210/pdb7njc/pdb WWPDB D_1292114003 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-07-21 2 'Structure model' 1 1 2021-07-28 3 'Structure model' 1 2 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 3 'Structure model' '_database_2.pdbx_DOI' 4 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7NJC _pdbx_database_status.recvd_initial_deposition_date 2021-02-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Toxoplasma CPSF4 in Apo form' 7NG2 unspecified PDB 'Toxoplasma CPSF4 bound to m6A' 7NH2 unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Swale, C.' 1 0000-0002-9739-7774 'Bowler, M.W.' 2 0000-0003-0465-3351 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Elife _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2050-084X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;A plant-like mechanism coupling m6A reading to polyadenylation safeguards transcriptome integrity and developmental gene partitioning in Toxoplasma . ; _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.7554/eLife.68312 _citation.pdbx_database_id_PubMed 34263725 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Farhat, D.C.' 1 ? primary 'Bowler, M.W.' 2 ? primary 'Communie, G.' 3 ? primary 'Pontier, D.' 4 ? primary 'Belmudes, L.' 5 ? primary 'Mas, C.' 6 ? primary 'Corrao, C.' 7 ? primary 'Coute, Y.' 8 ? primary 'Bougdour, A.' 9 ? primary 'Lagrange, T.' 10 ? primary 'Hakimi, M.A.' 11 ? primary 'Swale, C.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Zinc finger (CCCH type) motif-containing protein' 18447.994 1 ? ? ? ? 2 polymer syn ;RNA (5'-R(*(6MZ)P*CP*A)-3') ; 2219.406 1 ? ? ? 'Modified N6-Adenosine' 3 non-polymer syn '2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL' 164.200 1 ? ? ? ? 4 non-polymer syn N-methyladenosine 281.268 1 ? ? ? ? 5 water nat water 18.015 61 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name CPSF4 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GDPFGHVASPQSTKRFFIIKSNRMSNIYTSIQHGVWATSKGNSRKLSNAFTSTDHVLLLFSANESGGFQGFGRMMSLPDP QLFPGIWGPVQLRLGSNFRVMWLKQCKIEFEELGKVTNPWNDDLPLRKSRDGTEVPPALGSLLCTWMSQRPSEDLLAGTG IDPATR ; ;GDPFGHVASPQSTKRFFIIKSNRMSNIYTSIQHGVWATSKGNSRKLSNAFTSTDHVLLLFSANESGGFQGFGRMMSLPDP QLFPGIWGPVQLRLGSNFRVMWLKQCKIEFEELGKVTNPWNDDLPLRKSRDGTEVPPALGSLLCTWMSQRPSEDLLAGTG IDPATR ; A ? 2 polyribonucleotide no yes 'GA(6MZ)CAUU' GAACAUU B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL' TOE 4 N-methyladenosine 6MD 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASP n 1 3 PRO n 1 4 PHE n 1 5 GLY n 1 6 HIS n 1 7 VAL n 1 8 ALA n 1 9 SER n 1 10 PRO n 1 11 GLN n 1 12 SER n 1 13 THR n 1 14 LYS n 1 15 ARG n 1 16 PHE n 1 17 PHE n 1 18 ILE n 1 19 ILE n 1 20 LYS n 1 21 SER n 1 22 ASN n 1 23 ARG n 1 24 MET n 1 25 SER n 1 26 ASN n 1 27 ILE n 1 28 TYR n 1 29 THR n 1 30 SER n 1 31 ILE n 1 32 GLN n 1 33 HIS n 1 34 GLY n 1 35 VAL n 1 36 TRP n 1 37 ALA n 1 38 THR n 1 39 SER n 1 40 LYS n 1 41 GLY n 1 42 ASN n 1 43 SER n 1 44 ARG n 1 45 LYS n 1 46 LEU n 1 47 SER n 1 48 ASN n 1 49 ALA n 1 50 PHE n 1 51 THR n 1 52 SER n 1 53 THR n 1 54 ASP n 1 55 HIS n 1 56 VAL n 1 57 LEU n 1 58 LEU n 1 59 LEU n 1 60 PHE n 1 61 SER n 1 62 ALA n 1 63 ASN n 1 64 GLU n 1 65 SER n 1 66 GLY n 1 67 GLY n 1 68 PHE n 1 69 GLN n 1 70 GLY n 1 71 PHE n 1 72 GLY n 1 73 ARG n 1 74 MET n 1 75 MET n 1 76 SER n 1 77 LEU n 1 78 PRO n 1 79 ASP n 1 80 PRO n 1 81 GLN n 1 82 LEU n 1 83 PHE n 1 84 PRO n 1 85 GLY n 1 86 ILE n 1 87 TRP n 1 88 GLY n 1 89 PRO n 1 90 VAL n 1 91 GLN n 1 92 LEU n 1 93 ARG n 1 94 LEU n 1 95 GLY n 1 96 SER n 1 97 ASN n 1 98 PHE n 1 99 ARG n 1 100 VAL n 1 101 MET n 1 102 TRP n 1 103 LEU n 1 104 LYS n 1 105 GLN n 1 106 CYS n 1 107 LYS n 1 108 ILE n 1 109 GLU n 1 110 PHE n 1 111 GLU n 1 112 GLU n 1 113 LEU n 1 114 GLY n 1 115 LYS n 1 116 VAL n 1 117 THR n 1 118 ASN n 1 119 PRO n 1 120 TRP n 1 121 ASN n 1 122 ASP n 1 123 ASP n 1 124 LEU n 1 125 PRO n 1 126 LEU n 1 127 ARG n 1 128 LYS n 1 129 SER n 1 130 ARG n 1 131 ASP n 1 132 GLY n 1 133 THR n 1 134 GLU n 1 135 VAL n 1 136 PRO n 1 137 PRO n 1 138 ALA n 1 139 LEU n 1 140 GLY n 1 141 SER n 1 142 LEU n 1 143 LEU n 1 144 CYS n 1 145 THR n 1 146 TRP n 1 147 MET n 1 148 SER n 1 149 GLN n 1 150 ARG n 1 151 PRO n 1 152 SER n 1 153 GLU n 1 154 ASP n 1 155 LEU n 1 156 LEU n 1 157 ALA n 1 158 GLY n 1 159 THR n 1 160 GLY n 1 161 ILE n 1 162 ASP n 1 163 PRO n 1 164 ALA n 1 165 THR n 1 166 ARG n 2 1 G n 2 2 A n 2 3 6MZ n 2 4 C n 2 5 A n 2 6 U n 2 7 U n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 166 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TGME49_201200 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 50611 / Me49' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Toxoplasma gondii (strain ATCC 50611 / Me49)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 508771 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21-RIL _entity_src_gen.pdbx_host_org_variant BL21-RIL _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 7 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6MD non-polymer . N-methyladenosine ? 'C11 H15 N5 O4' 281.268 6MZ 'RNA linking' n "N6-METHYLADENOSINE-5'-MONOPHOSPHATE" ? 'C11 H16 N5 O7 P' 361.248 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TOE non-polymer . '2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL' ? 'C7 H16 O4' 164.200 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 433 ? ? ? A . n A 1 2 ASP 2 434 ? ? ? A . n A 1 3 PRO 3 435 ? ? ? A . n A 1 4 PHE 4 436 ? ? ? A . n A 1 5 GLY 5 437 ? ? ? A . n A 1 6 HIS 6 438 ? ? ? A . n A 1 7 VAL 7 439 ? ? ? A . n A 1 8 ALA 8 440 ? ? ? A . n A 1 9 SER 9 441 ? ? ? A . n A 1 10 PRO 10 442 442 PRO PRO A . n A 1 11 GLN 11 443 443 GLN GLN A . n A 1 12 SER 12 444 444 SER SER A . n A 1 13 THR 13 445 445 THR THR A . n A 1 14 LYS 14 446 446 LYS LYS A . n A 1 15 ARG 15 447 447 ARG ARG A . n A 1 16 PHE 16 448 448 PHE PHE A . n A 1 17 PHE 17 449 449 PHE PHE A . n A 1 18 ILE 18 450 450 ILE ILE A . n A 1 19 ILE 19 451 451 ILE ILE A . n A 1 20 LYS 20 452 452 LYS LYS A . n A 1 21 SER 21 453 453 SER SER A . n A 1 22 ASN 22 454 454 ASN ASN A . n A 1 23 ARG 23 455 455 ARG ARG A . n A 1 24 MET 24 456 456 MET MET A . n A 1 25 SER 25 457 457 SER SER A . n A 1 26 ASN 26 458 458 ASN ASN A . n A 1 27 ILE 27 459 459 ILE ILE A . n A 1 28 TYR 28 460 460 TYR TYR A . n A 1 29 THR 29 461 461 THR THR A . n A 1 30 SER 30 462 462 SER SER A . n A 1 31 ILE 31 463 463 ILE ILE A . n A 1 32 GLN 32 464 464 GLN GLN A . n A 1 33 HIS 33 465 465 HIS HIS A . n A 1 34 GLY 34 466 466 GLY GLY A . n A 1 35 VAL 35 467 467 VAL VAL A . n A 1 36 TRP 36 468 468 TRP TRP A . n A 1 37 ALA 37 469 469 ALA ALA A . n A 1 38 THR 38 470 470 THR THR A . n A 1 39 SER 39 471 471 SER SER A . n A 1 40 LYS 40 472 472 LYS LYS A . n A 1 41 GLY 41 473 473 GLY GLY A . n A 1 42 ASN 42 474 474 ASN ASN A . n A 1 43 SER 43 475 475 SER SER A . n A 1 44 ARG 44 476 476 ARG ARG A . n A 1 45 LYS 45 477 477 LYS LYS A . n A 1 46 LEU 46 478 478 LEU LEU A . n A 1 47 SER 47 479 479 SER SER A . n A 1 48 ASN 48 480 480 ASN ASN A . n A 1 49 ALA 49 481 481 ALA ALA A . n A 1 50 PHE 50 482 482 PHE PHE A . n A 1 51 THR 51 483 483 THR THR A . n A 1 52 SER 52 484 484 SER SER A . n A 1 53 THR 53 485 485 THR THR A . n A 1 54 ASP 54 486 486 ASP ASP A . n A 1 55 HIS 55 487 487 HIS HIS A . n A 1 56 VAL 56 488 488 VAL VAL A . n A 1 57 LEU 57 489 489 LEU LEU A . n A 1 58 LEU 58 490 490 LEU LEU A . n A 1 59 LEU 59 491 491 LEU LEU A . n A 1 60 PHE 60 492 492 PHE PHE A . n A 1 61 SER 61 493 493 SER SER A . n A 1 62 ALA 62 494 494 ALA ALA A . n A 1 63 ASN 63 495 495 ASN ASN A . n A 1 64 GLU 64 496 496 GLU GLU A . n A 1 65 SER 65 497 497 SER SER A . n A 1 66 GLY 66 498 498 GLY GLY A . n A 1 67 GLY 67 499 499 GLY GLY A . n A 1 68 PHE 68 500 500 PHE PHE A . n A 1 69 GLN 69 501 501 GLN GLN A . n A 1 70 GLY 70 502 502 GLY GLY A . n A 1 71 PHE 71 503 503 PHE PHE A . n A 1 72 GLY 72 504 504 GLY GLY A . n A 1 73 ARG 73 505 505 ARG ARG A . n A 1 74 MET 74 506 506 MET MET A . n A 1 75 MET 75 507 507 MET MET A . n A 1 76 SER 76 508 508 SER SER A . n A 1 77 LEU 77 509 509 LEU LEU A . n A 1 78 PRO 78 510 510 PRO PRO A . n A 1 79 ASP 79 511 511 ASP ASP A . n A 1 80 PRO 80 512 512 PRO PRO A . n A 1 81 GLN 81 513 513 GLN GLN A . n A 1 82 LEU 82 514 514 LEU LEU A . n A 1 83 PHE 83 515 515 PHE PHE A . n A 1 84 PRO 84 516 516 PRO PRO A . n A 1 85 GLY 85 517 517 GLY GLY A . n A 1 86 ILE 86 518 518 ILE ILE A . n A 1 87 TRP 87 519 519 TRP TRP A . n A 1 88 GLY 88 520 520 GLY GLY A . n A 1 89 PRO 89 521 521 PRO PRO A . n A 1 90 VAL 90 522 522 VAL VAL A . n A 1 91 GLN 91 523 523 GLN GLN A . n A 1 92 LEU 92 524 524 LEU LEU A . n A 1 93 ARG 93 525 525 ARG ARG A . n A 1 94 LEU 94 526 526 LEU LEU A . n A 1 95 GLY 95 527 527 GLY GLY A . n A 1 96 SER 96 528 528 SER SER A . n A 1 97 ASN 97 529 529 ASN ASN A . n A 1 98 PHE 98 530 530 PHE PHE A . n A 1 99 ARG 99 531 531 ARG ARG A . n A 1 100 VAL 100 532 532 VAL VAL A . n A 1 101 MET 101 533 533 MET MET A . n A 1 102 TRP 102 534 534 TRP TRP A . n A 1 103 LEU 103 535 535 LEU LEU A . n A 1 104 LYS 104 536 536 LYS LYS A . n A 1 105 GLN 105 537 537 GLN GLN A . n A 1 106 CYS 106 538 538 CYS CYS A . n A 1 107 LYS 107 539 539 LYS LYS A . n A 1 108 ILE 108 540 540 ILE ILE A . n A 1 109 GLU 109 541 541 GLU GLU A . n A 1 110 PHE 110 542 542 PHE PHE A . n A 1 111 GLU 111 543 543 GLU GLU A . n A 1 112 GLU 112 544 544 GLU GLU A . n A 1 113 LEU 113 545 545 LEU LEU A . n A 1 114 GLY 114 546 546 GLY GLY A . n A 1 115 LYS 115 547 547 LYS LYS A . n A 1 116 VAL 116 548 548 VAL VAL A . n A 1 117 THR 117 549 549 THR THR A . n A 1 118 ASN 118 550 550 ASN ASN A . n A 1 119 PRO 119 551 551 PRO PRO A . n A 1 120 TRP 120 552 552 TRP TRP A . n A 1 121 ASN 121 553 553 ASN ASN A . n A 1 122 ASP 122 554 554 ASP ASP A . n A 1 123 ASP 123 555 555 ASP ASP A . n A 1 124 LEU 124 556 556 LEU LEU A . n A 1 125 PRO 125 557 557 PRO PRO A . n A 1 126 LEU 126 558 558 LEU LEU A . n A 1 127 ARG 127 559 559 ARG ARG A . n A 1 128 LYS 128 560 560 LYS LYS A . n A 1 129 SER 129 561 561 SER SER A . n A 1 130 ARG 130 562 562 ARG ARG A . n A 1 131 ASP 131 563 563 ASP ASP A . n A 1 132 GLY 132 564 564 GLY GLY A . n A 1 133 THR 133 565 565 THR THR A . n A 1 134 GLU 134 566 566 GLU GLU A . n A 1 135 VAL 135 567 567 VAL VAL A . n A 1 136 PRO 136 568 568 PRO PRO A . n A 1 137 PRO 137 569 569 PRO PRO A . n A 1 138 ALA 138 570 570 ALA ALA A . n A 1 139 LEU 139 571 571 LEU LEU A . n A 1 140 GLY 140 572 572 GLY GLY A . n A 1 141 SER 141 573 573 SER SER A . n A 1 142 LEU 142 574 574 LEU LEU A . n A 1 143 LEU 143 575 575 LEU LEU A . n A 1 144 CYS 144 576 576 CYS CYS A . n A 1 145 THR 145 577 577 THR THR A . n A 1 146 TRP 146 578 578 TRP TRP A . n A 1 147 MET 147 579 579 MET MET A . n A 1 148 SER 148 580 580 SER SER A . n A 1 149 GLN 149 581 581 GLN GLN A . n A 1 150 ARG 150 582 582 ARG ARG A . n A 1 151 PRO 151 583 583 PRO PRO A . n A 1 152 SER 152 584 584 SER SER A . n A 1 153 GLU 153 585 585 GLU GLU A . n A 1 154 ASP 154 586 586 ASP ASP A . n A 1 155 LEU 155 587 587 LEU LEU A . n A 1 156 LEU 156 588 588 LEU LEU A . n A 1 157 ALA 157 589 589 ALA ALA A . n A 1 158 GLY 158 590 590 GLY GLY A . n A 1 159 THR 159 591 ? ? ? A . n A 1 160 GLY 160 592 ? ? ? A . n A 1 161 ILE 161 593 ? ? ? A . n A 1 162 ASP 162 594 ? ? ? A . n A 1 163 PRO 163 595 ? ? ? A . n A 1 164 ALA 164 596 ? ? ? A . n A 1 165 THR 165 597 ? ? ? A . n A 1 166 ARG 166 598 ? ? ? A . n B 2 1 G 1 -1 ? ? ? B . n B 2 2 A 2 0 ? ? ? B . n B 2 3 6MZ 3 1 ? ? ? B . n B 2 4 C 4 2 2 C C B . n B 2 5 A 5 3 3 A A B . n B 2 6 U 6 4 ? ? ? B . n B 2 7 U 7 5 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 TOE 1 600 600 TOE PG4 A . D 4 6MD 1 101 1 6MD 6MD B . E 5 HOH 1 701 12 HOH HOH A . E 5 HOH 2 702 10 HOH HOH A . E 5 HOH 3 703 50 HOH HOH A . E 5 HOH 4 704 35 HOH HOH A . E 5 HOH 5 705 26 HOH HOH A . E 5 HOH 6 706 37 HOH HOH A . E 5 HOH 7 707 29 HOH HOH A . E 5 HOH 8 708 25 HOH HOH A . E 5 HOH 9 709 54 HOH HOH A . E 5 HOH 10 710 61 HOH HOH A . E 5 HOH 11 711 32 HOH HOH A . E 5 HOH 12 712 38 HOH HOH A . E 5 HOH 13 713 4 HOH HOH A . E 5 HOH 14 714 9 HOH HOH A . E 5 HOH 15 715 19 HOH HOH A . E 5 HOH 16 716 15 HOH HOH A . E 5 HOH 17 717 42 HOH HOH A . E 5 HOH 18 718 62 HOH HOH A . E 5 HOH 19 719 31 HOH HOH A . E 5 HOH 20 720 2 HOH HOH A . E 5 HOH 21 721 24 HOH HOH A . E 5 HOH 22 722 8 HOH HOH A . E 5 HOH 23 723 6 HOH HOH A . E 5 HOH 24 724 44 HOH HOH A . E 5 HOH 25 725 18 HOH HOH A . E 5 HOH 26 726 45 HOH HOH A . E 5 HOH 27 727 58 HOH HOH A . E 5 HOH 28 728 56 HOH HOH A . E 5 HOH 29 729 1 HOH HOH A . E 5 HOH 30 730 14 HOH HOH A . E 5 HOH 31 731 30 HOH HOH A . E 5 HOH 32 732 22 HOH HOH A . E 5 HOH 33 733 39 HOH HOH A . E 5 HOH 34 734 49 HOH HOH A . E 5 HOH 35 735 43 HOH HOH A . E 5 HOH 36 736 16 HOH HOH A . E 5 HOH 37 737 51 HOH HOH A . E 5 HOH 38 738 60 HOH HOH A . E 5 HOH 39 739 47 HOH HOH A . E 5 HOH 40 740 27 HOH HOH A . E 5 HOH 41 741 23 HOH HOH A . E 5 HOH 42 742 33 HOH HOH A . E 5 HOH 43 743 46 HOH HOH A . E 5 HOH 44 744 48 HOH HOH A . E 5 HOH 45 745 3 HOH HOH A . E 5 HOH 46 746 57 HOH HOH A . E 5 HOH 47 747 7 HOH HOH A . E 5 HOH 48 748 28 HOH HOH A . E 5 HOH 49 749 55 HOH HOH A . E 5 HOH 50 750 52 HOH HOH A . E 5 HOH 51 751 20 HOH HOH A . E 5 HOH 52 752 59 HOH HOH A . E 5 HOH 53 753 34 HOH HOH A . E 5 HOH 54 754 11 HOH HOH A . E 5 HOH 55 755 5 HOH HOH A . E 5 HOH 56 756 53 HOH HOH A . E 5 HOH 57 757 41 HOH HOH A . E 5 HOH 58 758 17 HOH HOH A . E 5 HOH 59 759 21 HOH HOH A . E 5 HOH 60 760 36 HOH HOH A . E 5 HOH 61 761 40 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 1 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? STARANISO ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 5 # _cell.angle_alpha 114.679 _cell.angle_alpha_esd ? _cell.angle_beta 100.702 _cell.angle_beta_esd ? _cell.angle_gamma 97.653 _cell.angle_gamma_esd ? _cell.entry_id 7NJC _cell.details ? _cell.formula_units_Z ? _cell.length_a 32.442 _cell.length_a_esd ? _cell.length_b 35.153 _cell.length_b_esd ? _cell.length_c 38.350 _cell.length_c_esd ? _cell.volume 37946.646 _cell.volume_esd ? _cell.Z_PDB 1 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NJC _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7NJC _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.84 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 33.01 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M sodium acetate pH: 4.6 in 40% PEG 200' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-12-13 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 18.45 _reflns.entry_id 7NJC _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.38 _reflns.d_resolution_low 31.04 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19180 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 62.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 17.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.38 _reflns_shell.d_res_low 1.45 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 288 _reflns_shell.percent_possible_all 6.5 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 1.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.989 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 14.72 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7NJC _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.38 _refine.ls_d_res_low 31.04 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 19180 _refine.ls_number_reflns_R_free 1918 _refine.ls_number_reflns_R_work 17262 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 62.86 _refine.ls_percent_reflns_R_free 10.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1456 _refine.ls_R_factor_R_free 0.1685 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1430 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.13 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4r3i _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 21.2755 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.0986 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.38 _refine_hist.d_res_low 31.04 _refine_hist.number_atoms_solvent 61 _refine_hist.number_atoms_total 1312 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1178 _refine_hist.pdbx_number_atoms_nucleic_acid 42 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0056 ? 1302 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.9154 ? 1769 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.4400 ? 190 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0047 ? 217 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 12.6246 ? 486 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.38 1.41 . . 8 76 3.82 . . . 0.1898 . 0.1622 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.41 1.45 . . 19 171 8.97 . . . 0.1883 . 0.1620 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.45 1.49 . . 37 333 16.93 . . . 0.1448 . 0.1038 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.49 1.54 . . 54 482 24.31 . . . 0.1617 . 0.1127 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.54 1.59 . . 75 675 34.53 . . . 0.1385 . 0.1029 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.59 1.66 . . 102 919 46.81 . . . 0.1696 . 0.1135 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.66 1.73 . . 148 1337 69.04 . . . 0.1609 . 0.1105 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.73 1.82 . . 208 1868 94.71 . . . 0.1671 . 0.1161 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.83 1.94 . . 208 1875 96.26 . . . 0.1494 . 0.1167 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.94 2.09 . . 211 1893 96.51 . . . 0.1556 . 0.1254 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.09 2.30 . . 212 1913 97.21 . . . 0.1607 . 0.1354 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.30 2.63 . . 211 1901 97.33 . . . 0.1730 . 0.1575 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.63 3.31 . . 212 1898 96.92 . . . 0.1796 . 0.1628 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.32 31.04 . . 213 1921 97.62 . . . 0.1764 . 0.1588 . . . . . . . . . . . # _struct.entry_id 7NJC _struct.title 'Crystal structure of the Toxoplasma CPSF4 YTH-domain in complex with a 7 mer m6A-modified RNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7NJC _struct_keywords.text 'YTH, Cleavage and Polyadenylation, RNA, m6A, RNA recognition protein, RNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP S8F6K2_TOXGM S8F6K2 ? 1 ;DPFGHVASPQSTKRFFIIKSNRMSNIYTSIQHGVWATSKGNSRKLSNAFTSTDHVLLLFSANESGGFQGFGRMMSLPDPQ LFPGIWGPVQLRLGSNFRVMWLKQCKIEFEELGKVTNPWNDDLPLRKSRDGTEVPPALGSLLCTWMSQRPSEDLLAGTGI DPATR ; 434 2 PDB 7NJC 7NJC ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7NJC A 2 ? 166 ? S8F6K2 434 ? 598 ? 434 598 2 2 7NJC B 1 ? 7 ? 7NJC -1 ? 5 ? -1 5 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 7NJC _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code S8F6K2 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 433 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1410 ? 1 MORE -9 ? 1 'SSA (A^2)' 7900 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 23 ? GLY A 34 ? ARG A 455 GLY A 466 1 ? 12 HELX_P HELX_P2 AA2 SER A 39 ? SER A 52 ? SER A 471 SER A 484 1 ? 14 HELX_P HELX_P3 AA3 GLY A 88 ? LEU A 94 ? GLY A 520 LEU A 526 5 ? 7 HELX_P HELX_P4 AA4 GLU A 111 ? GLY A 114 ? GLU A 543 GLY A 546 5 ? 4 HELX_P HELX_P5 AA5 PRO A 125 ? SER A 129 ? PRO A 557 SER A 561 5 ? 5 HELX_P HELX_P6 AA6 PRO A 136 ? GLN A 149 ? PRO A 568 GLN A 581 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_comp_id C _struct_conn.ptnr1_label_seq_id 4 _struct_conn.ptnr1_label_atom_id P _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_comp_id 6MD _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id "O3'" _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id C _struct_conn.ptnr1_auth_seq_id 2 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id 6MD _struct_conn.ptnr2_auth_seq_id 101 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.550 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 35 ? TRP A 36 ? VAL A 467 TRP A 468 AA1 2 PHE A 98 ? GLU A 109 ? PHE A 530 GLU A 541 AA1 3 GLY A 67 ? MET A 74 ? GLY A 499 MET A 506 AA1 4 THR A 53 ? ALA A 62 ? THR A 485 ALA A 494 AA1 5 SER A 12 ? SER A 21 ? SER A 444 SER A 453 AA1 6 GLU A 134 ? VAL A 135 ? GLU A 566 VAL A 567 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TRP A 36 ? N TRP A 468 O PHE A 98 ? O PHE A 530 AA1 2 3 O LEU A 103 ? O LEU A 535 N PHE A 71 ? N PHE A 503 AA1 3 4 O GLY A 72 ? O GLY A 504 N LEU A 58 ? N LEU A 490 AA1 4 5 O LEU A 57 ? O LEU A 489 N ARG A 15 ? N ARG A 447 AA1 5 6 N PHE A 16 ? N PHE A 448 O VAL A 135 ? O VAL A 567 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id PHE _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 515 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 39.32 _pdbx_validate_torsion.psi 53.88 # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # _pdbx_entry_details.entry_id 7NJC _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 761 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.24 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 433 ? A GLY 1 2 1 Y 1 A ASP 434 ? A ASP 2 3 1 Y 1 A PRO 435 ? A PRO 3 4 1 Y 1 A PHE 436 ? A PHE 4 5 1 Y 1 A GLY 437 ? A GLY 5 6 1 Y 1 A HIS 438 ? A HIS 6 7 1 Y 1 A VAL 439 ? A VAL 7 8 1 Y 1 A ALA 440 ? A ALA 8 9 1 Y 1 A SER 441 ? A SER 9 10 1 Y 1 A THR 591 ? A THR 159 11 1 Y 1 A GLY 592 ? A GLY 160 12 1 Y 1 A ILE 593 ? A ILE 161 13 1 Y 1 A ASP 594 ? A ASP 162 14 1 Y 1 A PRO 595 ? A PRO 163 15 1 Y 1 A ALA 596 ? A ALA 164 16 1 Y 1 A THR 597 ? A THR 165 17 1 Y 1 A ARG 598 ? A ARG 166 18 1 Y 1 B G -1 ? B G 1 19 1 Y 1 B A 0 ? B A 2 20 1 Y 1 B 6MZ 1 ? B 6MZ 3 21 1 Y 1 B U 4 ? B U 6 22 1 Y 1 B U 5 ? B U 7 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 6MD "O5'" O N N 1 6MD "C5'" C N N 2 6MD "C4'" C N R 3 6MD "O4'" O N N 4 6MD "C3'" C N S 5 6MD "O3'" O N N 6 6MD "C2'" C N R 7 6MD "O2'" O N N 8 6MD "C1'" C N R 9 6MD N9 N Y N 10 6MD C8 C Y N 11 6MD N7 N Y N 12 6MD C5 C Y N 13 6MD C6 C Y N 14 6MD N6 N N N 15 6MD N1 N Y N 16 6MD C2 C Y N 17 6MD N3 N Y N 18 6MD C4 C Y N 19 6MD CZ C N N 20 6MD H1 H N N 21 6MD H2 H N N 22 6MD H3 H N N 23 6MD H4 H N N 24 6MD H5 H N N 25 6MD H6 H N N 26 6MD H7 H N N 27 6MD H8 H N N 28 6MD H9 H N N 29 6MD H10 H N N 30 6MD H11 H N N 31 6MD H12 H N N 32 6MD H13 H N N 33 6MD H14 H N N 34 6MD H15 H N N 35 6MZ C2 C Y N 36 6MZ C4 C Y N 37 6MZ C5 C Y N 38 6MZ O1P O N N 39 6MZ O2P O N N 40 6MZ N9 N Y N 41 6MZ N3 N Y N 42 6MZ N1 N Y N 43 6MZ C6 C Y N 44 6MZ N6 N N N 45 6MZ C9 C N N 46 6MZ N7 N Y N 47 6MZ C8 C Y N 48 6MZ "O5'" O N N 49 6MZ "C5'" C N N 50 6MZ "C4'" C N R 51 6MZ "O4'" O N N 52 6MZ "C1'" C N R 53 6MZ "C2'" C N R 54 6MZ "O2'" O N N 55 6MZ "C3'" C N S 56 6MZ "O3'" O N N 57 6MZ P P N N 58 6MZ O3P O N N 59 6MZ H2 H N N 60 6MZ H1P H N N 61 6MZ H8 H N N 62 6MZ "H1'" H N N 63 6MZ H9C1 H N N 64 6MZ H9C2 H N N 65 6MZ "H5'1" H N N 66 6MZ "H5'2" H N N 67 6MZ "H4'" H N N 68 6MZ "H3'" H N N 69 6MZ "H2'" H N N 70 6MZ HA H N N 71 6MZ HB H N N 72 6MZ H3P H N N 73 6MZ H6 H N N 74 6MZ H9 H N N 75 A OP3 O N N 76 A P P N N 77 A OP1 O N N 78 A OP2 O N N 79 A "O5'" O N N 80 A "C5'" C N N 81 A "C4'" C N R 82 A "O4'" O N N 83 A "C3'" C N S 84 A "O3'" O N N 85 A "C2'" C N R 86 A "O2'" O N N 87 A "C1'" C N R 88 A N9 N Y N 89 A C8 C Y N 90 A N7 N Y N 91 A C5 C Y N 92 A C6 C Y N 93 A N6 N N N 94 A N1 N Y N 95 A C2 C Y N 96 A N3 N Y N 97 A C4 C Y N 98 A HOP3 H N N 99 A HOP2 H N N 100 A "H5'" H N N 101 A "H5''" H N N 102 A "H4'" H N N 103 A "H3'" H N N 104 A "HO3'" H N N 105 A "H2'" H N N 106 A "HO2'" H N N 107 A "H1'" H N N 108 A H8 H N N 109 A H61 H N N 110 A H62 H N N 111 A H2 H N N 112 ALA N N N N 113 ALA CA C N S 114 ALA C C N N 115 ALA O O N N 116 ALA CB C N N 117 ALA OXT O N N 118 ALA H H N N 119 ALA H2 H N N 120 ALA HA H N N 121 ALA HB1 H N N 122 ALA HB2 H N N 123 ALA HB3 H N N 124 ALA HXT H N N 125 ARG N N N N 126 ARG CA C N S 127 ARG C C N N 128 ARG O O N N 129 ARG CB C N N 130 ARG CG C N N 131 ARG CD C N N 132 ARG NE N N N 133 ARG CZ C N N 134 ARG NH1 N N N 135 ARG NH2 N N N 136 ARG OXT O N N 137 ARG H H N N 138 ARG H2 H N N 139 ARG HA H N N 140 ARG HB2 H N N 141 ARG HB3 H N N 142 ARG HG2 H N N 143 ARG HG3 H N N 144 ARG HD2 H N N 145 ARG HD3 H N N 146 ARG HE H N N 147 ARG HH11 H N N 148 ARG HH12 H N N 149 ARG HH21 H N N 150 ARG HH22 H N N 151 ARG HXT H N N 152 ASN N N N N 153 ASN CA C N S 154 ASN C C N N 155 ASN O O N N 156 ASN CB C N N 157 ASN CG C N N 158 ASN OD1 O N N 159 ASN ND2 N N N 160 ASN OXT O N N 161 ASN H H N N 162 ASN H2 H N N 163 ASN HA H N N 164 ASN HB2 H N N 165 ASN HB3 H N N 166 ASN HD21 H N N 167 ASN HD22 H N N 168 ASN HXT H N N 169 ASP N N N N 170 ASP CA C N S 171 ASP C C N N 172 ASP O O N N 173 ASP CB C N N 174 ASP CG C N N 175 ASP OD1 O N N 176 ASP OD2 O N N 177 ASP OXT O N N 178 ASP H H N N 179 ASP H2 H N N 180 ASP HA H N N 181 ASP HB2 H N N 182 ASP HB3 H N N 183 ASP HD2 H N N 184 ASP HXT H N N 185 C OP3 O N N 186 C P P N N 187 C OP1 O N N 188 C OP2 O N N 189 C "O5'" O N N 190 C "C5'" C N N 191 C "C4'" C N R 192 C "O4'" O N N 193 C "C3'" C N S 194 C "O3'" O N N 195 C "C2'" C N R 196 C "O2'" O N N 197 C "C1'" C N R 198 C N1 N N N 199 C C2 C N N 200 C O2 O N N 201 C N3 N N N 202 C C4 C N N 203 C N4 N N N 204 C C5 C N N 205 C C6 C N N 206 C HOP3 H N N 207 C HOP2 H N N 208 C "H5'" H N N 209 C "H5''" H N N 210 C "H4'" H N N 211 C "H3'" H N N 212 C "HO3'" H N N 213 C "H2'" H N N 214 C "HO2'" H N N 215 C "H1'" H N N 216 C H41 H N N 217 C H42 H N N 218 C H5 H N N 219 C H6 H N N 220 CYS N N N N 221 CYS CA C N R 222 CYS C C N N 223 CYS O O N N 224 CYS CB C N N 225 CYS SG S N N 226 CYS OXT O N N 227 CYS H H N N 228 CYS H2 H N N 229 CYS HA H N N 230 CYS HB2 H N N 231 CYS HB3 H N N 232 CYS HG H N N 233 CYS HXT H N N 234 G OP3 O N N 235 G P P N N 236 G OP1 O N N 237 G OP2 O N N 238 G "O5'" O N N 239 G "C5'" C N N 240 G "C4'" C N R 241 G "O4'" O N N 242 G "C3'" C N S 243 G "O3'" O N N 244 G "C2'" C N R 245 G "O2'" O N N 246 G "C1'" C N R 247 G N9 N Y N 248 G C8 C Y N 249 G N7 N Y N 250 G C5 C Y N 251 G C6 C N N 252 G O6 O N N 253 G N1 N N N 254 G C2 C N N 255 G N2 N N N 256 G N3 N N N 257 G C4 C Y N 258 G HOP3 H N N 259 G HOP2 H N N 260 G "H5'" H N N 261 G "H5''" H N N 262 G "H4'" H N N 263 G "H3'" H N N 264 G "HO3'" H N N 265 G "H2'" H N N 266 G "HO2'" H N N 267 G "H1'" H N N 268 G H8 H N N 269 G H1 H N N 270 G H21 H N N 271 G H22 H N N 272 GLN N N N N 273 GLN CA C N S 274 GLN C C N N 275 GLN O O N N 276 GLN CB C N N 277 GLN CG C N N 278 GLN CD C N N 279 GLN OE1 O N N 280 GLN NE2 N N N 281 GLN OXT O N N 282 GLN H H N N 283 GLN H2 H N N 284 GLN HA H N N 285 GLN HB2 H N N 286 GLN HB3 H N N 287 GLN HG2 H N N 288 GLN HG3 H N N 289 GLN HE21 H N N 290 GLN HE22 H N N 291 GLN HXT H N N 292 GLU N N N N 293 GLU CA C N S 294 GLU C C N N 295 GLU O O N N 296 GLU CB C N N 297 GLU CG C N N 298 GLU CD C N N 299 GLU OE1 O N N 300 GLU OE2 O N N 301 GLU OXT O N N 302 GLU H H N N 303 GLU H2 H N N 304 GLU HA H N N 305 GLU HB2 H N N 306 GLU HB3 H N N 307 GLU HG2 H N N 308 GLU HG3 H N N 309 GLU HE2 H N N 310 GLU HXT H N N 311 GLY N N N N 312 GLY CA C N N 313 GLY C C N N 314 GLY O O N N 315 GLY OXT O N N 316 GLY H H N N 317 GLY H2 H N N 318 GLY HA2 H N N 319 GLY HA3 H N N 320 GLY HXT H N N 321 HIS N N N N 322 HIS CA C N S 323 HIS C C N N 324 HIS O O N N 325 HIS CB C N N 326 HIS CG C Y N 327 HIS ND1 N Y N 328 HIS CD2 C Y N 329 HIS CE1 C Y N 330 HIS NE2 N Y N 331 HIS OXT O N N 332 HIS H H N N 333 HIS H2 H N N 334 HIS HA H N N 335 HIS HB2 H N N 336 HIS HB3 H N N 337 HIS HD1 H N N 338 HIS HD2 H N N 339 HIS HE1 H N N 340 HIS HE2 H N N 341 HIS HXT H N N 342 HOH O O N N 343 HOH H1 H N N 344 HOH H2 H N N 345 ILE N N N N 346 ILE CA C N S 347 ILE C C N N 348 ILE O O N N 349 ILE CB C N S 350 ILE CG1 C N N 351 ILE CG2 C N N 352 ILE CD1 C N N 353 ILE OXT O N N 354 ILE H H N N 355 ILE H2 H N N 356 ILE HA H N N 357 ILE HB H N N 358 ILE HG12 H N N 359 ILE HG13 H N N 360 ILE HG21 H N N 361 ILE HG22 H N N 362 ILE HG23 H N N 363 ILE HD11 H N N 364 ILE HD12 H N N 365 ILE HD13 H N N 366 ILE HXT H N N 367 LEU N N N N 368 LEU CA C N S 369 LEU C C N N 370 LEU O O N N 371 LEU CB C N N 372 LEU CG C N N 373 LEU CD1 C N N 374 LEU CD2 C N N 375 LEU OXT O N N 376 LEU H H N N 377 LEU H2 H N N 378 LEU HA H N N 379 LEU HB2 H N N 380 LEU HB3 H N N 381 LEU HG H N N 382 LEU HD11 H N N 383 LEU HD12 H N N 384 LEU HD13 H N N 385 LEU HD21 H N N 386 LEU HD22 H N N 387 LEU HD23 H N N 388 LEU HXT H N N 389 LYS N N N N 390 LYS CA C N S 391 LYS C C N N 392 LYS O O N N 393 LYS CB C N N 394 LYS CG C N N 395 LYS CD C N N 396 LYS CE C N N 397 LYS NZ N N N 398 LYS OXT O N N 399 LYS H H N N 400 LYS H2 H N N 401 LYS HA H N N 402 LYS HB2 H N N 403 LYS HB3 H N N 404 LYS HG2 H N N 405 LYS HG3 H N N 406 LYS HD2 H N N 407 LYS HD3 H N N 408 LYS HE2 H N N 409 LYS HE3 H N N 410 LYS HZ1 H N N 411 LYS HZ2 H N N 412 LYS HZ3 H N N 413 LYS HXT H N N 414 MET N N N N 415 MET CA C N S 416 MET C C N N 417 MET O O N N 418 MET CB C N N 419 MET CG C N N 420 MET SD S N N 421 MET CE C N N 422 MET OXT O N N 423 MET H H N N 424 MET H2 H N N 425 MET HA H N N 426 MET HB2 H N N 427 MET HB3 H N N 428 MET HG2 H N N 429 MET HG3 H N N 430 MET HE1 H N N 431 MET HE2 H N N 432 MET HE3 H N N 433 MET HXT H N N 434 PHE N N N N 435 PHE CA C N S 436 PHE C C N N 437 PHE O O N N 438 PHE CB C N N 439 PHE CG C Y N 440 PHE CD1 C Y N 441 PHE CD2 C Y N 442 PHE CE1 C Y N 443 PHE CE2 C Y N 444 PHE CZ C Y N 445 PHE OXT O N N 446 PHE H H N N 447 PHE H2 H N N 448 PHE HA H N N 449 PHE HB2 H N N 450 PHE HB3 H N N 451 PHE HD1 H N N 452 PHE HD2 H N N 453 PHE HE1 H N N 454 PHE HE2 H N N 455 PHE HZ H N N 456 PHE HXT H N N 457 PRO N N N N 458 PRO CA C N S 459 PRO C C N N 460 PRO O O N N 461 PRO CB C N N 462 PRO CG C N N 463 PRO CD C N N 464 PRO OXT O N N 465 PRO H H N N 466 PRO HA H N N 467 PRO HB2 H N N 468 PRO HB3 H N N 469 PRO HG2 H N N 470 PRO HG3 H N N 471 PRO HD2 H N N 472 PRO HD3 H N N 473 PRO HXT H N N 474 SER N N N N 475 SER CA C N S 476 SER C C N N 477 SER O O N N 478 SER CB C N N 479 SER OG O N N 480 SER OXT O N N 481 SER H H N N 482 SER H2 H N N 483 SER HA H N N 484 SER HB2 H N N 485 SER HB3 H N N 486 SER HG H N N 487 SER HXT H N N 488 THR N N N N 489 THR CA C N S 490 THR C C N N 491 THR O O N N 492 THR CB C N R 493 THR OG1 O N N 494 THR CG2 C N N 495 THR OXT O N N 496 THR H H N N 497 THR H2 H N N 498 THR HA H N N 499 THR HB H N N 500 THR HG1 H N N 501 THR HG21 H N N 502 THR HG22 H N N 503 THR HG23 H N N 504 THR HXT H N N 505 TOE "O2'" O N N 506 TOE "CA'" C N N 507 TOE "CB'" C N N 508 TOE "OC'" O N N 509 TOE "CD'" C N N 510 TOE "CE'" C N N 511 TOE "OF'" O N N 512 TOE "CG'" C N N 513 TOE "CH'" C N N 514 TOE "OI'" O N N 515 TOE "CK'" C N N 516 TOE H1 H N N 517 TOE H2 H N N 518 TOE H3 H N N 519 TOE H4 H N N 520 TOE H5 H N N 521 TOE H6 H N N 522 TOE H7 H N N 523 TOE H8 H N N 524 TOE H9 H N N 525 TOE H10 H N N 526 TOE H11 H N N 527 TOE H12 H N N 528 TOE H13 H N N 529 TOE H14 H N N 530 TOE H15 H N N 531 TOE H16 H N N 532 TRP N N N N 533 TRP CA C N S 534 TRP C C N N 535 TRP O O N N 536 TRP CB C N N 537 TRP CG C Y N 538 TRP CD1 C Y N 539 TRP CD2 C Y N 540 TRP NE1 N Y N 541 TRP CE2 C Y N 542 TRP CE3 C Y N 543 TRP CZ2 C Y N 544 TRP CZ3 C Y N 545 TRP CH2 C Y N 546 TRP OXT O N N 547 TRP H H N N 548 TRP H2 H N N 549 TRP HA H N N 550 TRP HB2 H N N 551 TRP HB3 H N N 552 TRP HD1 H N N 553 TRP HE1 H N N 554 TRP HE3 H N N 555 TRP HZ2 H N N 556 TRP HZ3 H N N 557 TRP HH2 H N N 558 TRP HXT H N N 559 TYR N N N N 560 TYR CA C N S 561 TYR C C N N 562 TYR O O N N 563 TYR CB C N N 564 TYR CG C Y N 565 TYR CD1 C Y N 566 TYR CD2 C Y N 567 TYR CE1 C Y N 568 TYR CE2 C Y N 569 TYR CZ C Y N 570 TYR OH O N N 571 TYR OXT O N N 572 TYR H H N N 573 TYR H2 H N N 574 TYR HA H N N 575 TYR HB2 H N N 576 TYR HB3 H N N 577 TYR HD1 H N N 578 TYR HD2 H N N 579 TYR HE1 H N N 580 TYR HE2 H N N 581 TYR HH H N N 582 TYR HXT H N N 583 U OP3 O N N 584 U P P N N 585 U OP1 O N N 586 U OP2 O N N 587 U "O5'" O N N 588 U "C5'" C N N 589 U "C4'" C N R 590 U "O4'" O N N 591 U "C3'" C N S 592 U "O3'" O N N 593 U "C2'" C N R 594 U "O2'" O N N 595 U "C1'" C N R 596 U N1 N N N 597 U C2 C N N 598 U O2 O N N 599 U N3 N N N 600 U C4 C N N 601 U O4 O N N 602 U C5 C N N 603 U C6 C N N 604 U HOP3 H N N 605 U HOP2 H N N 606 U "H5'" H N N 607 U "H5''" H N N 608 U "H4'" H N N 609 U "H3'" H N N 610 U "HO3'" H N N 611 U "H2'" H N N 612 U "HO2'" H N N 613 U "H1'" H N N 614 U H3 H N N 615 U H5 H N N 616 U H6 H N N 617 VAL N N N N 618 VAL CA C N S 619 VAL C C N N 620 VAL O O N N 621 VAL CB C N N 622 VAL CG1 C N N 623 VAL CG2 C N N 624 VAL OXT O N N 625 VAL H H N N 626 VAL H2 H N N 627 VAL HA H N N 628 VAL HB H N N 629 VAL HG11 H N N 630 VAL HG12 H N N 631 VAL HG13 H N N 632 VAL HG21 H N N 633 VAL HG22 H N N 634 VAL HG23 H N N 635 VAL HXT H N N 636 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6MD C2 N1 doub Y N 1 6MD C2 N3 sing Y N 2 6MD N1 C6 sing Y N 3 6MD N3 C4 doub Y N 4 6MD CZ N6 sing N N 5 6MD C6 N6 sing N N 6 6MD C6 C5 doub Y N 7 6MD C4 C5 sing Y N 8 6MD C4 N9 sing Y N 9 6MD "C4'" "O4'" sing N N 10 6MD "C4'" "C5'" sing N N 11 6MD "C4'" "C3'" sing N N 12 6MD "O4'" "C1'" sing N N 13 6MD C5 N7 sing Y N 14 6MD "C5'" "O5'" sing N N 15 6MD "O3'" "C3'" sing N N 16 6MD "C1'" N9 sing N N 17 6MD "C1'" "C2'" sing N N 18 6MD N9 C8 sing Y N 19 6MD "C3'" "C2'" sing N N 20 6MD "C2'" "O2'" sing N N 21 6MD N7 C8 doub Y N 22 6MD "O5'" H1 sing N N 23 6MD "C5'" H2 sing N N 24 6MD "C5'" H3 sing N N 25 6MD "C4'" H4 sing N N 26 6MD "C3'" H5 sing N N 27 6MD "O3'" H6 sing N N 28 6MD "C2'" H7 sing N N 29 6MD "O2'" H8 sing N N 30 6MD "C1'" H9 sing N N 31 6MD C8 H10 sing N N 32 6MD N6 H11 sing N N 33 6MD C2 H12 sing N N 34 6MD CZ H13 sing N N 35 6MD CZ H14 sing N N 36 6MD CZ H15 sing N N 37 6MZ C4 C5 sing Y N 38 6MZ C4 N9 sing Y N 39 6MZ C2 N3 sing Y N 40 6MZ C4 N3 doub Y N 41 6MZ C2 N1 doub Y N 42 6MZ C5 C6 doub Y N 43 6MZ N1 C6 sing Y N 44 6MZ C6 N6 sing N N 45 6MZ N6 C9 sing N N 46 6MZ C5 N7 sing Y N 47 6MZ N9 C8 sing Y N 48 6MZ N7 C8 doub Y N 49 6MZ "O5'" "C5'" sing N N 50 6MZ "C1'" "H1'" sing N N 51 6MZ C9 H9C1 sing N N 52 6MZ C9 H9C2 sing N N 53 6MZ "C5'" "H5'1" sing N N 54 6MZ "C5'" "H5'2" sing N N 55 6MZ "C4'" "H4'" sing N N 56 6MZ "C3'" "H3'" sing N N 57 6MZ "C2'" "H2'" sing N N 58 6MZ "O2'" HA sing N N 59 6MZ "O3'" HB sing N N 60 6MZ O3P H3P sing N N 61 6MZ "C5'" "C4'" sing N N 62 6MZ "C4'" "O4'" sing N N 63 6MZ N9 "C1'" sing N N 64 6MZ "O4'" "C1'" sing N N 65 6MZ "C1'" "C2'" sing N N 66 6MZ "C2'" "O2'" sing N N 67 6MZ "C4'" "C3'" sing N N 68 6MZ "C2'" "C3'" sing N N 69 6MZ "C3'" "O3'" sing N N 70 6MZ O1P P sing N N 71 6MZ O2P P doub N N 72 6MZ "O5'" P sing N N 73 6MZ P O3P sing N N 74 6MZ C2 H2 sing N N 75 6MZ O1P H1P sing N N 76 6MZ C8 H8 sing N N 77 6MZ N6 H6 sing N N 78 6MZ C9 H9 sing N N 79 A OP3 P sing N N 80 A OP3 HOP3 sing N N 81 A P OP1 doub N N 82 A P OP2 sing N N 83 A P "O5'" sing N N 84 A OP2 HOP2 sing N N 85 A "O5'" "C5'" sing N N 86 A "C5'" "C4'" sing N N 87 A "C5'" "H5'" sing N N 88 A "C5'" "H5''" sing N N 89 A "C4'" "O4'" sing N N 90 A "C4'" "C3'" sing N N 91 A "C4'" "H4'" sing N N 92 A "O4'" "C1'" sing N N 93 A "C3'" "O3'" sing N N 94 A "C3'" "C2'" sing N N 95 A "C3'" "H3'" sing N N 96 A "O3'" "HO3'" sing N N 97 A "C2'" "O2'" sing N N 98 A "C2'" "C1'" sing N N 99 A "C2'" "H2'" sing N N 100 A "O2'" "HO2'" sing N N 101 A "C1'" N9 sing N N 102 A "C1'" "H1'" sing N N 103 A N9 C8 sing Y N 104 A N9 C4 sing Y N 105 A C8 N7 doub Y N 106 A C8 H8 sing N N 107 A N7 C5 sing Y N 108 A C5 C6 sing Y N 109 A C5 C4 doub Y N 110 A C6 N6 sing N N 111 A C6 N1 doub Y N 112 A N6 H61 sing N N 113 A N6 H62 sing N N 114 A N1 C2 sing Y N 115 A C2 N3 doub Y N 116 A C2 H2 sing N N 117 A N3 C4 sing Y N 118 ALA N CA sing N N 119 ALA N H sing N N 120 ALA N H2 sing N N 121 ALA CA C sing N N 122 ALA CA CB sing N N 123 ALA CA HA sing N N 124 ALA C O doub N N 125 ALA C OXT sing N N 126 ALA CB HB1 sing N N 127 ALA CB HB2 sing N N 128 ALA CB HB3 sing N N 129 ALA OXT HXT sing N N 130 ARG N CA sing N N 131 ARG N H sing N N 132 ARG N H2 sing N N 133 ARG CA C sing N N 134 ARG CA CB sing N N 135 ARG CA HA sing N N 136 ARG C O doub N N 137 ARG C OXT sing N N 138 ARG CB CG sing N N 139 ARG CB HB2 sing N N 140 ARG CB HB3 sing N N 141 ARG CG CD sing N N 142 ARG CG HG2 sing N N 143 ARG CG HG3 sing N N 144 ARG CD NE sing N N 145 ARG CD HD2 sing N N 146 ARG CD HD3 sing N N 147 ARG NE CZ sing N N 148 ARG NE HE sing N N 149 ARG CZ NH1 sing N N 150 ARG CZ NH2 doub N N 151 ARG NH1 HH11 sing N N 152 ARG NH1 HH12 sing N N 153 ARG NH2 HH21 sing N N 154 ARG NH2 HH22 sing N N 155 ARG OXT HXT sing N N 156 ASN N CA sing N N 157 ASN N H sing N N 158 ASN N H2 sing N N 159 ASN CA C sing N N 160 ASN CA CB sing N N 161 ASN CA HA sing N N 162 ASN C O doub N N 163 ASN C OXT sing N N 164 ASN CB CG sing N N 165 ASN CB HB2 sing N N 166 ASN CB HB3 sing N N 167 ASN CG OD1 doub N N 168 ASN CG ND2 sing N N 169 ASN ND2 HD21 sing N N 170 ASN ND2 HD22 sing N N 171 ASN OXT HXT sing N N 172 ASP N CA sing N N 173 ASP N H sing N N 174 ASP N H2 sing N N 175 ASP CA C sing N N 176 ASP CA CB sing N N 177 ASP CA HA sing N N 178 ASP C O doub N N 179 ASP C OXT sing N N 180 ASP CB CG sing N N 181 ASP CB HB2 sing N N 182 ASP CB HB3 sing N N 183 ASP CG OD1 doub N N 184 ASP CG OD2 sing N N 185 ASP OD2 HD2 sing N N 186 ASP OXT HXT sing N N 187 C OP3 P sing N N 188 C OP3 HOP3 sing N N 189 C P OP1 doub N N 190 C P OP2 sing N N 191 C P "O5'" sing N N 192 C OP2 HOP2 sing N N 193 C "O5'" "C5'" sing N N 194 C "C5'" "C4'" sing N N 195 C "C5'" "H5'" sing N N 196 C "C5'" "H5''" sing N N 197 C "C4'" "O4'" sing N N 198 C "C4'" "C3'" sing N N 199 C "C4'" "H4'" sing N N 200 C "O4'" "C1'" sing N N 201 C "C3'" "O3'" sing N N 202 C "C3'" "C2'" sing N N 203 C "C3'" "H3'" sing N N 204 C "O3'" "HO3'" sing N N 205 C "C2'" "O2'" sing N N 206 C "C2'" "C1'" sing N N 207 C "C2'" "H2'" sing N N 208 C "O2'" "HO2'" sing N N 209 C "C1'" N1 sing N N 210 C "C1'" "H1'" sing N N 211 C N1 C2 sing N N 212 C N1 C6 sing N N 213 C C2 O2 doub N N 214 C C2 N3 sing N N 215 C N3 C4 doub N N 216 C C4 N4 sing N N 217 C C4 C5 sing N N 218 C N4 H41 sing N N 219 C N4 H42 sing N N 220 C C5 C6 doub N N 221 C C5 H5 sing N N 222 C C6 H6 sing N N 223 CYS N CA sing N N 224 CYS N H sing N N 225 CYS N H2 sing N N 226 CYS CA C sing N N 227 CYS CA CB sing N N 228 CYS CA HA sing N N 229 CYS C O doub N N 230 CYS C OXT sing N N 231 CYS CB SG sing N N 232 CYS CB HB2 sing N N 233 CYS CB HB3 sing N N 234 CYS SG HG sing N N 235 CYS OXT HXT sing N N 236 G OP3 P sing N N 237 G OP3 HOP3 sing N N 238 G P OP1 doub N N 239 G P OP2 sing N N 240 G P "O5'" sing N N 241 G OP2 HOP2 sing N N 242 G "O5'" "C5'" sing N N 243 G "C5'" "C4'" sing N N 244 G "C5'" "H5'" sing N N 245 G "C5'" "H5''" sing N N 246 G "C4'" "O4'" sing N N 247 G "C4'" "C3'" sing N N 248 G "C4'" "H4'" sing N N 249 G "O4'" "C1'" sing N N 250 G "C3'" "O3'" sing N N 251 G "C3'" "C2'" sing N N 252 G "C3'" "H3'" sing N N 253 G "O3'" "HO3'" sing N N 254 G "C2'" "O2'" sing N N 255 G "C2'" "C1'" sing N N 256 G "C2'" "H2'" sing N N 257 G "O2'" "HO2'" sing N N 258 G "C1'" N9 sing N N 259 G "C1'" "H1'" sing N N 260 G N9 C8 sing Y N 261 G N9 C4 sing Y N 262 G C8 N7 doub Y N 263 G C8 H8 sing N N 264 G N7 C5 sing Y N 265 G C5 C6 sing N N 266 G C5 C4 doub Y N 267 G C6 O6 doub N N 268 G C6 N1 sing N N 269 G N1 C2 sing N N 270 G N1 H1 sing N N 271 G C2 N2 sing N N 272 G C2 N3 doub N N 273 G N2 H21 sing N N 274 G N2 H22 sing N N 275 G N3 C4 sing N N 276 GLN N CA sing N N 277 GLN N H sing N N 278 GLN N H2 sing N N 279 GLN CA C sing N N 280 GLN CA CB sing N N 281 GLN CA HA sing N N 282 GLN C O doub N N 283 GLN C OXT sing N N 284 GLN CB CG sing N N 285 GLN CB HB2 sing N N 286 GLN CB HB3 sing N N 287 GLN CG CD sing N N 288 GLN CG HG2 sing N N 289 GLN CG HG3 sing N N 290 GLN CD OE1 doub N N 291 GLN CD NE2 sing N N 292 GLN NE2 HE21 sing N N 293 GLN NE2 HE22 sing N N 294 GLN OXT HXT sing N N 295 GLU N CA sing N N 296 GLU N H sing N N 297 GLU N H2 sing N N 298 GLU CA C sing N N 299 GLU CA CB sing N N 300 GLU CA HA sing N N 301 GLU C O doub N N 302 GLU C OXT sing N N 303 GLU CB CG sing N N 304 GLU CB HB2 sing N N 305 GLU CB HB3 sing N N 306 GLU CG CD sing N N 307 GLU CG HG2 sing N N 308 GLU CG HG3 sing N N 309 GLU CD OE1 doub N N 310 GLU CD OE2 sing N N 311 GLU OE2 HE2 sing N N 312 GLU OXT HXT sing N N 313 GLY N CA sing N N 314 GLY N H sing N N 315 GLY N H2 sing N N 316 GLY CA C sing N N 317 GLY CA HA2 sing N N 318 GLY CA HA3 sing N N 319 GLY C O doub N N 320 GLY C OXT sing N N 321 GLY OXT HXT sing N N 322 HIS N CA sing N N 323 HIS N H sing N N 324 HIS N H2 sing N N 325 HIS CA C sing N N 326 HIS CA CB sing N N 327 HIS CA HA sing N N 328 HIS C O doub N N 329 HIS C OXT sing N N 330 HIS CB CG sing N N 331 HIS CB HB2 sing N N 332 HIS CB HB3 sing N N 333 HIS CG ND1 sing Y N 334 HIS CG CD2 doub Y N 335 HIS ND1 CE1 doub Y N 336 HIS ND1 HD1 sing N N 337 HIS CD2 NE2 sing Y N 338 HIS CD2 HD2 sing N N 339 HIS CE1 NE2 sing Y N 340 HIS CE1 HE1 sing N N 341 HIS NE2 HE2 sing N N 342 HIS OXT HXT sing N N 343 HOH O H1 sing N N 344 HOH O H2 sing N N 345 ILE N CA sing N N 346 ILE N H sing N N 347 ILE N H2 sing N N 348 ILE CA C sing N N 349 ILE CA CB sing N N 350 ILE CA HA sing N N 351 ILE C O doub N N 352 ILE C OXT sing N N 353 ILE CB CG1 sing N N 354 ILE CB CG2 sing N N 355 ILE CB HB sing N N 356 ILE CG1 CD1 sing N N 357 ILE CG1 HG12 sing N N 358 ILE CG1 HG13 sing N N 359 ILE CG2 HG21 sing N N 360 ILE CG2 HG22 sing N N 361 ILE CG2 HG23 sing N N 362 ILE CD1 HD11 sing N N 363 ILE CD1 HD12 sing N N 364 ILE CD1 HD13 sing N N 365 ILE OXT HXT sing N N 366 LEU N CA sing N N 367 LEU N H sing N N 368 LEU N H2 sing N N 369 LEU CA C sing N N 370 LEU CA CB sing N N 371 LEU CA HA sing N N 372 LEU C O doub N N 373 LEU C OXT sing N N 374 LEU CB CG sing N N 375 LEU CB HB2 sing N N 376 LEU CB HB3 sing N N 377 LEU CG CD1 sing N N 378 LEU CG CD2 sing N N 379 LEU CG HG sing N N 380 LEU CD1 HD11 sing N N 381 LEU CD1 HD12 sing N N 382 LEU CD1 HD13 sing N N 383 LEU CD2 HD21 sing N N 384 LEU CD2 HD22 sing N N 385 LEU CD2 HD23 sing N N 386 LEU OXT HXT sing N N 387 LYS N CA sing N N 388 LYS N H sing N N 389 LYS N H2 sing N N 390 LYS CA C sing N N 391 LYS CA CB sing N N 392 LYS CA HA sing N N 393 LYS C O doub N N 394 LYS C OXT sing N N 395 LYS CB CG sing N N 396 LYS CB HB2 sing N N 397 LYS CB HB3 sing N N 398 LYS CG CD sing N N 399 LYS CG HG2 sing N N 400 LYS CG HG3 sing N N 401 LYS CD CE sing N N 402 LYS CD HD2 sing N N 403 LYS CD HD3 sing N N 404 LYS CE NZ sing N N 405 LYS CE HE2 sing N N 406 LYS CE HE3 sing N N 407 LYS NZ HZ1 sing N N 408 LYS NZ HZ2 sing N N 409 LYS NZ HZ3 sing N N 410 LYS OXT HXT sing N N 411 MET N CA sing N N 412 MET N H sing N N 413 MET N H2 sing N N 414 MET CA C sing N N 415 MET CA CB sing N N 416 MET CA HA sing N N 417 MET C O doub N N 418 MET C OXT sing N N 419 MET CB CG sing N N 420 MET CB HB2 sing N N 421 MET CB HB3 sing N N 422 MET CG SD sing N N 423 MET CG HG2 sing N N 424 MET CG HG3 sing N N 425 MET SD CE sing N N 426 MET CE HE1 sing N N 427 MET CE HE2 sing N N 428 MET CE HE3 sing N N 429 MET OXT HXT sing N N 430 PHE N CA sing N N 431 PHE N H sing N N 432 PHE N H2 sing N N 433 PHE CA C sing N N 434 PHE CA CB sing N N 435 PHE CA HA sing N N 436 PHE C O doub N N 437 PHE C OXT sing N N 438 PHE CB CG sing N N 439 PHE CB HB2 sing N N 440 PHE CB HB3 sing N N 441 PHE CG CD1 doub Y N 442 PHE CG CD2 sing Y N 443 PHE CD1 CE1 sing Y N 444 PHE CD1 HD1 sing N N 445 PHE CD2 CE2 doub Y N 446 PHE CD2 HD2 sing N N 447 PHE CE1 CZ doub Y N 448 PHE CE1 HE1 sing N N 449 PHE CE2 CZ sing Y N 450 PHE CE2 HE2 sing N N 451 PHE CZ HZ sing N N 452 PHE OXT HXT sing N N 453 PRO N CA sing N N 454 PRO N CD sing N N 455 PRO N H sing N N 456 PRO CA C sing N N 457 PRO CA CB sing N N 458 PRO CA HA sing N N 459 PRO C O doub N N 460 PRO C OXT sing N N 461 PRO CB CG sing N N 462 PRO CB HB2 sing N N 463 PRO CB HB3 sing N N 464 PRO CG CD sing N N 465 PRO CG HG2 sing N N 466 PRO CG HG3 sing N N 467 PRO CD HD2 sing N N 468 PRO CD HD3 sing N N 469 PRO OXT HXT sing N N 470 SER N CA sing N N 471 SER N H sing N N 472 SER N H2 sing N N 473 SER CA C sing N N 474 SER CA CB sing N N 475 SER CA HA sing N N 476 SER C O doub N N 477 SER C OXT sing N N 478 SER CB OG sing N N 479 SER CB HB2 sing N N 480 SER CB HB3 sing N N 481 SER OG HG sing N N 482 SER OXT HXT sing N N 483 THR N CA sing N N 484 THR N H sing N N 485 THR N H2 sing N N 486 THR CA C sing N N 487 THR CA CB sing N N 488 THR CA HA sing N N 489 THR C O doub N N 490 THR C OXT sing N N 491 THR CB OG1 sing N N 492 THR CB CG2 sing N N 493 THR CB HB sing N N 494 THR OG1 HG1 sing N N 495 THR CG2 HG21 sing N N 496 THR CG2 HG22 sing N N 497 THR CG2 HG23 sing N N 498 THR OXT HXT sing N N 499 TOE "CK'" "OI'" sing N N 500 TOE "OI'" "CH'" sing N N 501 TOE "CH'" "CG'" sing N N 502 TOE "CG'" "OF'" sing N N 503 TOE "CE'" "OF'" sing N N 504 TOE "CE'" "CD'" sing N N 505 TOE "CA'" "O2'" sing N N 506 TOE "CA'" "CB'" sing N N 507 TOE "OC'" "CB'" sing N N 508 TOE "OC'" "CD'" sing N N 509 TOE "O2'" H1 sing N N 510 TOE "CA'" H2 sing N N 511 TOE "CA'" H3 sing N N 512 TOE "CB'" H4 sing N N 513 TOE "CB'" H5 sing N N 514 TOE "CD'" H6 sing N N 515 TOE "CD'" H7 sing N N 516 TOE "CE'" H8 sing N N 517 TOE "CE'" H9 sing N N 518 TOE "CG'" H10 sing N N 519 TOE "CG'" H11 sing N N 520 TOE "CH'" H12 sing N N 521 TOE "CH'" H13 sing N N 522 TOE "CK'" H14 sing N N 523 TOE "CK'" H15 sing N N 524 TOE "CK'" H16 sing N N 525 TRP N CA sing N N 526 TRP N H sing N N 527 TRP N H2 sing N N 528 TRP CA C sing N N 529 TRP CA CB sing N N 530 TRP CA HA sing N N 531 TRP C O doub N N 532 TRP C OXT sing N N 533 TRP CB CG sing N N 534 TRP CB HB2 sing N N 535 TRP CB HB3 sing N N 536 TRP CG CD1 doub Y N 537 TRP CG CD2 sing Y N 538 TRP CD1 NE1 sing Y N 539 TRP CD1 HD1 sing N N 540 TRP CD2 CE2 doub Y N 541 TRP CD2 CE3 sing Y N 542 TRP NE1 CE2 sing Y N 543 TRP NE1 HE1 sing N N 544 TRP CE2 CZ2 sing Y N 545 TRP CE3 CZ3 doub Y N 546 TRP CE3 HE3 sing N N 547 TRP CZ2 CH2 doub Y N 548 TRP CZ2 HZ2 sing N N 549 TRP CZ3 CH2 sing Y N 550 TRP CZ3 HZ3 sing N N 551 TRP CH2 HH2 sing N N 552 TRP OXT HXT sing N N 553 TYR N CA sing N N 554 TYR N H sing N N 555 TYR N H2 sing N N 556 TYR CA C sing N N 557 TYR CA CB sing N N 558 TYR CA HA sing N N 559 TYR C O doub N N 560 TYR C OXT sing N N 561 TYR CB CG sing N N 562 TYR CB HB2 sing N N 563 TYR CB HB3 sing N N 564 TYR CG CD1 doub Y N 565 TYR CG CD2 sing Y N 566 TYR CD1 CE1 sing Y N 567 TYR CD1 HD1 sing N N 568 TYR CD2 CE2 doub Y N 569 TYR CD2 HD2 sing N N 570 TYR CE1 CZ doub Y N 571 TYR CE1 HE1 sing N N 572 TYR CE2 CZ sing Y N 573 TYR CE2 HE2 sing N N 574 TYR CZ OH sing N N 575 TYR OH HH sing N N 576 TYR OXT HXT sing N N 577 U OP3 P sing N N 578 U OP3 HOP3 sing N N 579 U P OP1 doub N N 580 U P OP2 sing N N 581 U P "O5'" sing N N 582 U OP2 HOP2 sing N N 583 U "O5'" "C5'" sing N N 584 U "C5'" "C4'" sing N N 585 U "C5'" "H5'" sing N N 586 U "C5'" "H5''" sing N N 587 U "C4'" "O4'" sing N N 588 U "C4'" "C3'" sing N N 589 U "C4'" "H4'" sing N N 590 U "O4'" "C1'" sing N N 591 U "C3'" "O3'" sing N N 592 U "C3'" "C2'" sing N N 593 U "C3'" "H3'" sing N N 594 U "O3'" "HO3'" sing N N 595 U "C2'" "O2'" sing N N 596 U "C2'" "C1'" sing N N 597 U "C2'" "H2'" sing N N 598 U "O2'" "HO2'" sing N N 599 U "C1'" N1 sing N N 600 U "C1'" "H1'" sing N N 601 U N1 C2 sing N N 602 U N1 C6 sing N N 603 U C2 O2 doub N N 604 U C2 N3 sing N N 605 U N3 C4 sing N N 606 U N3 H3 sing N N 607 U C4 O4 doub N N 608 U C4 C5 sing N N 609 U C5 C6 doub N N 610 U C5 H5 sing N N 611 U C6 H6 sing N N 612 VAL N CA sing N N 613 VAL N H sing N N 614 VAL N H2 sing N N 615 VAL CA C sing N N 616 VAL CA CB sing N N 617 VAL CA HA sing N N 618 VAL C O doub N N 619 VAL C OXT sing N N 620 VAL CB CG1 sing N N 621 VAL CB CG2 sing N N 622 VAL CB HB sing N N 623 VAL CG1 HG11 sing N N 624 VAL CG1 HG12 sing N N 625 VAL CG1 HG13 sing N N 626 VAL CG2 HG21 sing N N 627 VAL CG2 HG22 sing N N 628 VAL CG2 HG23 sing N N 629 VAL OXT HXT sing N N 630 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Laboratories of Excellence (LabEx)' France ANR-11-LABX-0024 1 'European Research Council (ERC)' 'European Union' 614880 2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 6MD _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 6MD _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4R3I _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 1' _space_group.name_Hall 'P 1' _space_group.IT_number 1 _space_group.crystal_system triclinic _space_group.id 1 # _atom_sites.entry_id 7NJC _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.030824 _atom_sites.fract_transf_matrix[1][2] 0.004142 _atom_sites.fract_transf_matrix[1][3] 0.008650 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028703 _atom_sites.fract_transf_matrix[2][3] 0.014631 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029786 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_