HEADER HYDROLASE 22-FEB-21 7NL2 TITLE STRUCTURE OF XYN11 FROM PSEUDOTHERMOTOGA THERMARUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-XYLANASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.2.1.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOTHERMOTOGA THERMARUM DSM 5069; SOURCE 3 ORGANISM_TAXID: 688269; SOURCE 4 GENE: THETH_1636; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA2 KEYWDS GLYCOSIDE HYDROLASE, XYLAN, XYLANASE, XYLANASES, ENZYME, KEYWDS 2 HEMICELLULOSES, XYLOSE, BIOPOLYMER, PLANTS, PSEUDOTHERMOTOGA KEYWDS 3 MARITIMA, EXTREMOPHILIC PROTEIN, THERMORRESISTANT, THERMOSTABILITY, KEYWDS 4 ALKALINITY, GLYCOSIDE HYDROLASE FAMILY 10., HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.JIMENEZ-ORTEGA,J.SANZ-APARICIO REVDAT 2 31-JAN-24 7NL2 1 REMARK REVDAT 1 09-JUN-21 7NL2 0 JRNL AUTH D.TALENS-PERALES,E.JIMENEZ-ORTEGA,P.SANCHEZ-TORRES, JRNL AUTH 2 J.SANZ-APARICIO,J.POLAINA JRNL TITL PHYLOGENETIC, FUNCTIONAL AND STRUCTURAL CHARACTERIZATION OF JRNL TITL 2 A GH10 XYLANASE ACTIVE AT EXTREME CONDITIONS OF TEMPERATURE JRNL TITL 3 AND ALKALINITY JRNL REF COMPUT STRUCT BIOTECHNOL J V. 19 2676 2021 JRNL REFN ESSN 2001-0370 JRNL DOI 10.1016/J.CSBJ.2021.05.004 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 77764 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4055 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5668 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.2890 REMARK 3 BIN FREE R VALUE SET COUNT : 289 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5604 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 716 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.12000 REMARK 3 B22 (A**2) : -0.97000 REMARK 3 B33 (A**2) : -1.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.100 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.097 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.535 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5880 ; 0.008 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5494 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7970 ; 1.435 ; 1.648 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12657 ; 1.414 ; 1.589 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 687 ; 6.829 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 340 ;31.161 ;21.882 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1012 ;12.895 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;14.989 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 738 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6558 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1458 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 8 340 B 8 340 12176 0.070 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7NL2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1292112882. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JAN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979257 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL-CUT, CRYOCOOLED REMARK 200 OPTICS : KB MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81903 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 47.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.68400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 7.0.066 REMARK 200 STARTING MODEL: 5OFJ REMARK 200 REMARK 200 REMARK: PRISM BAR SHAPE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 3350, 0.2 M PROLINE, 0.1 M REMARK 280 HEPES PH 7.5. MOTHER LIQUOR SOLUTION WAS SUPPLEMENTED BY 25% OF REMARK 280 GLYCEROL TO CRYOPROTECT THE CRYSTAL DURING THE DATA COLLECTION., REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 45.72600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.26350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.63400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.26350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 45.72600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.63400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 PRO A 2 REMARK 465 GLN A 3 REMARK 465 PRO A 4 REMARK 465 MET A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 LYS A 343 REMARK 465 VAL A 344 REMARK 465 ASP A 345 REMARK 465 LEU A 346 REMARK 465 GLN A 347 REMARK 465 PRO A 348 REMARK 465 SER A 349 REMARK 465 LEU A 350 REMARK 465 ILE A 351 REMARK 465 SER A 352 REMARK 465 GLY B 1 REMARK 465 PRO B 2 REMARK 465 GLN B 3 REMARK 465 PRO B 4 REMARK 465 MET B 5 REMARK 465 SER B 6 REMARK 465 SER B 7 REMARK 465 SER B 342 REMARK 465 LYS B 343 REMARK 465 VAL B 344 REMARK 465 ASP B 345 REMARK 465 LEU B 346 REMARK 465 GLN B 347 REMARK 465 PRO B 348 REMARK 465 SER B 349 REMARK 465 LEU B 350 REMARK 465 ILE B 351 REMARK 465 SER B 352 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 251 42.49 -144.44 REMARK 500 PHE A 312 -31.88 -144.97 REMARK 500 VAL A 341 -60.32 -95.25 REMARK 500 GLU B 251 44.01 -143.02 REMARK 500 PHE B 312 -31.33 -146.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 851 DISTANCE = 5.85 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPT A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPT B 403 DBREF 7NL2 A 1 343 UNP F7YXD6 F7YXD6_9THEM 22 364 DBREF 7NL2 B 1 343 UNP F7YXD6 F7YXD6_9THEM 22 364 SEQADV 7NL2 VAL A 344 UNP F7YXD6 INSERTION SEQADV 7NL2 ASP A 345 UNP F7YXD6 INSERTION SEQADV 7NL2 LEU A 346 UNP F7YXD6 INSERTION SEQADV 7NL2 GLN A 347 UNP F7YXD6 INSERTION SEQADV 7NL2 PRO A 348 UNP F7YXD6 INSERTION SEQADV 7NL2 SER A 349 UNP F7YXD6 INSERTION SEQADV 7NL2 LEU A 350 UNP F7YXD6 INSERTION SEQADV 7NL2 ILE A 351 UNP F7YXD6 INSERTION SEQADV 7NL2 SER A 352 UNP F7YXD6 INSERTION SEQADV 7NL2 VAL B 344 UNP F7YXD6 INSERTION SEQADV 7NL2 ASP B 345 UNP F7YXD6 INSERTION SEQADV 7NL2 LEU B 346 UNP F7YXD6 INSERTION SEQADV 7NL2 GLN B 347 UNP F7YXD6 INSERTION SEQADV 7NL2 PRO B 348 UNP F7YXD6 INSERTION SEQADV 7NL2 SER B 349 UNP F7YXD6 INSERTION SEQADV 7NL2 LEU B 350 UNP F7YXD6 INSERTION SEQADV 7NL2 ILE B 351 UNP F7YXD6 INSERTION SEQADV 7NL2 SER B 352 UNP F7YXD6 INSERTION SEQRES 1 A 352 GLY PRO GLN PRO MET SER SER GLN ILE PRO SER LEU LYS SEQRES 2 A 352 ASP VAL PHE LEU GLN ASP PHE LYS ILE GLY VAL ALA LEU SEQRES 3 A 352 PRO VAL ARG VAL PHE SER ASN SER MET ASP VAL GLU LEU SEQRES 4 A 352 ILE THR LYS HIS PHE ASN SER MET THR ALA GLU ASN GLU SEQRES 5 A 352 MET LYS PRO GLU SER ILE LEU ARG ARG ASP ALA SER GLY SEQRES 6 A 352 LYS ILE TYR TYR ASP PHE THR VAL ALA ASP ARG TYR ILE SEQRES 7 A 352 GLU PHE ALA GLN LYS HIS GLY MET VAL VAL ARG GLY HIS SEQRES 8 A 352 THR LEU VAL TRP HIS SER GLN THR PRO GLU TRP PHE PHE SEQRES 9 A 352 LYS ASP GLU LYS GLY ASN LEU LEU SER ARG GLU ALA MET SEQRES 10 A 352 ILE GLU ARG MET ARG GLU TYR ILE HIS THR VAL VAL GLY SEQRES 11 A 352 ARG TYR ARG GLY LYS VAL TYR ALA TRP ASP VAL VAL ASN SEQRES 12 A 352 GLU ALA VAL ASP GLU ASN GLN PRO ASP GLY LEU ARG ARG SEQRES 13 A 352 SER LEU TRP TYR GLN VAL ILE GLY PRO ASP TYR ILE GLU SEQRES 14 A 352 LEU ALA PHE LYS PHE ALA HIS GLU ALA ASP PRO ASP ALA SEQRES 15 A 352 LEU LEU PHE TYR ASN ASP TYR ASN GLU PHE PHE PRO LYS SEQRES 16 A 352 LYS ARG ASP ILE ILE PHE LYS LEU VAL LYS GLU MET ARG SEQRES 17 A 352 GLU LYS GLY VAL PRO ILE HIS GLY ILE GLY MET GLN GLN SEQRES 18 A 352 HIS LEU THR LEU ALA ASP ASN VAL GLY TRP ILE ASP ILE SEQRES 19 A 352 ALA ILE GLN LYS PHE LYS THR ILE SER GLY ILE GLN ILE SEQRES 20 A 352 HIS ILE THR GLU LEU ASP VAL SER VAL TYR LYS SER ARG SEQRES 21 A 352 SER PRO SER ILE ILE TYR GLN THR PRO PRO LEU GLU VAL SEQRES 22 A 352 LEU LYS GLU GLN ALA GLU PHE TYR ARG LYS LEU PHE GLU SEQRES 23 A 352 ILE TYR ARG LYS HIS THR ASP VAL ILE THR ASN VAL THR SEQRES 24 A 352 PHE TRP GLY LEU LYS ASP ASP TYR SER TRP LEU ARG PHE SEQRES 25 A 352 PHE PHE GLY ARG ARG ASN ASP TRP PRO LEU LEU PHE ASP SEQRES 26 A 352 GLU ASN TYR GLN PRO LYS PRO ALA PHE TRP SER VAL ILE SEQRES 27 A 352 GLU SER VAL SER LYS VAL ASP LEU GLN PRO SER LEU ILE SEQRES 28 A 352 SER SEQRES 1 B 352 GLY PRO GLN PRO MET SER SER GLN ILE PRO SER LEU LYS SEQRES 2 B 352 ASP VAL PHE LEU GLN ASP PHE LYS ILE GLY VAL ALA LEU SEQRES 3 B 352 PRO VAL ARG VAL PHE SER ASN SER MET ASP VAL GLU LEU SEQRES 4 B 352 ILE THR LYS HIS PHE ASN SER MET THR ALA GLU ASN GLU SEQRES 5 B 352 MET LYS PRO GLU SER ILE LEU ARG ARG ASP ALA SER GLY SEQRES 6 B 352 LYS ILE TYR TYR ASP PHE THR VAL ALA ASP ARG TYR ILE SEQRES 7 B 352 GLU PHE ALA GLN LYS HIS GLY MET VAL VAL ARG GLY HIS SEQRES 8 B 352 THR LEU VAL TRP HIS SER GLN THR PRO GLU TRP PHE PHE SEQRES 9 B 352 LYS ASP GLU LYS GLY ASN LEU LEU SER ARG GLU ALA MET SEQRES 10 B 352 ILE GLU ARG MET ARG GLU TYR ILE HIS THR VAL VAL GLY SEQRES 11 B 352 ARG TYR ARG GLY LYS VAL TYR ALA TRP ASP VAL VAL ASN SEQRES 12 B 352 GLU ALA VAL ASP GLU ASN GLN PRO ASP GLY LEU ARG ARG SEQRES 13 B 352 SER LEU TRP TYR GLN VAL ILE GLY PRO ASP TYR ILE GLU SEQRES 14 B 352 LEU ALA PHE LYS PHE ALA HIS GLU ALA ASP PRO ASP ALA SEQRES 15 B 352 LEU LEU PHE TYR ASN ASP TYR ASN GLU PHE PHE PRO LYS SEQRES 16 B 352 LYS ARG ASP ILE ILE PHE LYS LEU VAL LYS GLU MET ARG SEQRES 17 B 352 GLU LYS GLY VAL PRO ILE HIS GLY ILE GLY MET GLN GLN SEQRES 18 B 352 HIS LEU THR LEU ALA ASP ASN VAL GLY TRP ILE ASP ILE SEQRES 19 B 352 ALA ILE GLN LYS PHE LYS THR ILE SER GLY ILE GLN ILE SEQRES 20 B 352 HIS ILE THR GLU LEU ASP VAL SER VAL TYR LYS SER ARG SEQRES 21 B 352 SER PRO SER ILE ILE TYR GLN THR PRO PRO LEU GLU VAL SEQRES 22 B 352 LEU LYS GLU GLN ALA GLU PHE TYR ARG LYS LEU PHE GLU SEQRES 23 B 352 ILE TYR ARG LYS HIS THR ASP VAL ILE THR ASN VAL THR SEQRES 24 B 352 PHE TRP GLY LEU LYS ASP ASP TYR SER TRP LEU ARG PHE SEQRES 25 B 352 PHE PHE GLY ARG ARG ASN ASP TRP PRO LEU LEU PHE ASP SEQRES 26 B 352 GLU ASN TYR GLN PRO LYS PRO ALA PHE TRP SER VAL ILE SEQRES 27 B 352 GLU SER VAL SER LYS VAL ASP LEU GLN PRO SER LEU ILE SEQRES 28 B 352 SER HET GOL A 401 6 HET GOL A 402 6 HET IPT A 403 15 HET GOL A 404 6 HET GOL B 401 6 HET GOL B 402 6 HET IPT B 403 15 HETNAM GOL GLYCEROL HETNAM IPT 1-METHYLETHYL 1-THIO-BETA-D-GALACTOPYRANOSIDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN IPT ISOPROPYL-1-BETA-D-THIOGALACTOSIDE; 1-(ISOPROPYLTHIO)- HETSYN 2 IPT BETA-GALACTOPYRANSIDE; 1-METHYLETHYL 1-THIO-BETA-D- HETSYN 3 IPT GALACTOSIDE; 1-METHYLETHYL 1-THIO-D-GALACTOSIDE; 1- HETSYN 4 IPT METHYLETHYL 1-THIO-GALACTOSIDE FORMUL 3 GOL 5(C3 H8 O3) FORMUL 5 IPT 2(C9 H18 O5 S) FORMUL 10 HOH *716(H2 O) HELIX 1 AA1 SER A 11 PHE A 16 1 6 HELIX 2 AA2 PRO A 27 SER A 32 5 6 HELIX 3 AA3 ASN A 33 PHE A 44 1 12 HELIX 4 AA4 LYS A 54 ILE A 58 1 5 HELIX 5 AA5 VAL A 73 GLY A 85 1 13 HELIX 6 AA6 PRO A 100 LYS A 105 5 6 HELIX 7 AA7 SER A 113 TYR A 132 1 20 HELIX 8 AA8 SER A 157 ILE A 163 1 7 HELIX 9 AA9 ASP A 166 ASP A 179 1 14 HELIX 10 AB1 PHE A 193 LYS A 210 1 18 HELIX 11 AB2 ASN A 228 LYS A 240 1 13 HELIX 12 AB3 PRO A 270 HIS A 291 1 22 HELIX 13 AB4 LYS A 304 PHE A 312 5 9 HELIX 14 AB5 LYS A 331 SER A 340 1 10 HELIX 15 AB6 SER B 11 PHE B 16 1 6 HELIX 16 AB7 PRO B 27 SER B 32 5 6 HELIX 17 AB8 ASN B 33 PHE B 44 1 12 HELIX 18 AB9 LYS B 54 ILE B 58 1 5 HELIX 19 AC1 VAL B 73 GLY B 85 1 13 HELIX 20 AC2 PRO B 100 LYS B 105 5 6 HELIX 21 AC3 SER B 113 TYR B 132 1 20 HELIX 22 AC4 SER B 157 ILE B 163 1 7 HELIX 23 AC5 ASP B 166 ASP B 179 1 14 HELIX 24 AC6 PHE B 193 LYS B 210 1 18 HELIX 25 AC7 ASN B 228 LYS B 240 1 13 HELIX 26 AC8 PRO B 270 HIS B 291 1 22 HELIX 27 AC9 LYS B 304 PHE B 312 5 9 HELIX 28 AD1 LYS B 331 SER B 340 1 10 SHEET 1 AA110 HIS A 222 THR A 224 0 SHEET 2 AA110 GLN A 246 SER A 255 1 O ASP A 253 N LEU A 223 SHEET 3 AA110 ILE A 295 PHE A 300 1 O THR A 299 N ILE A 249 SHEET 4 AA110 LYS A 21 LEU A 26 1 N LYS A 21 O VAL A 298 SHEET 5 AA110 SER A 46 ALA A 49 1 O THR A 48 N LEU A 26 SHEET 6 AA110 VAL A 87 VAL A 94 1 O ARG A 89 N MET A 47 SHEET 7 AA110 ALA A 138 ASN A 143 1 O ALA A 138 N GLY A 90 SHEET 8 AA110 LEU A 183 ASP A 188 1 O PHE A 185 N TRP A 139 SHEET 9 AA110 GLY A 216 MET A 219 1 O GLY A 218 N TYR A 186 SHEET 10 AA110 GLN A 246 SER A 255 1 O HIS A 248 N MET A 219 SHEET 1 AA2 2 LEU A 59 ARG A 61 0 SHEET 2 AA2 2 ILE A 67 TYR A 69 -1 O TYR A 68 N ARG A 60 SHEET 1 AA3 3 ILE A 264 TYR A 266 0 SHEET 2 AA3 3 ILE B 67 ASP B 70 -1 O TYR B 69 N ILE A 265 SHEET 3 AA3 3 LEU B 59 ARG B 61 -1 N ARG B 60 O TYR B 68 SHEET 1 AA410 HIS B 222 THR B 224 0 SHEET 2 AA410 GLN B 246 SER B 255 1 O ASP B 253 N LEU B 223 SHEET 3 AA410 ILE B 295 PHE B 300 1 O THR B 299 N ILE B 249 SHEET 4 AA410 LYS B 21 LEU B 26 1 N LYS B 21 O VAL B 298 SHEET 5 AA410 SER B 46 ALA B 49 1 O THR B 48 N LEU B 26 SHEET 6 AA410 VAL B 87 VAL B 94 1 O ARG B 89 N MET B 47 SHEET 7 AA410 ALA B 138 ASN B 143 1 O ALA B 138 N GLY B 90 SHEET 8 AA410 LEU B 183 ASP B 188 1 O PHE B 185 N TRP B 139 SHEET 9 AA410 GLY B 216 MET B 219 1 O GLY B 218 N TYR B 186 SHEET 10 AA410 GLN B 246 SER B 255 1 O HIS B 248 N MET B 219 CISPEP 1 HIS A 91 THR A 92 0 -0.56 CISPEP 2 HIS B 91 THR B 92 0 -3.88 SITE 1 AC1 5 GLU A 148 PHE A 193 HOH A 540 HOH A 691 SITE 2 AC1 5 HOH A 703 SITE 1 AC2 8 PHE A 192 ALA A 226 ASP A 227 ASN A 228 SITE 2 AC2 8 TRP A 231 HOH A 506 HOH A 752 GLN B 329 SITE 1 AC3 15 TRP A 95 GLU A 144 TYR A 189 GLN A 220 SITE 2 AC3 15 HIS A 222 GLU A 251 ARG A 260 TRP A 301 SITE 3 AC3 15 TRP A 309 HOH A 503 HOH A 505 HOH A 602 SITE 4 AC3 15 HOH A 607 HOH A 633 HOH A 777 SITE 1 AC4 5 TYR A 266 HOH A 542 HOH A 618 HOH A 709 SITE 2 AC4 5 TYR B 68 SITE 1 AC5 5 GLU B 50 ASN B 51 TRP B 301 TRP B 309 SITE 2 AC5 5 IPT B 403 SITE 1 AC6 8 TYR B 189 ASN B 190 HIS B 222 ARG B 260 SITE 2 AC6 8 IPT B 403 HOH B 548 HOH B 655 HOH B 711 SITE 1 AC7 12 TRP B 95 GLU B 144 TYR B 189 GLN B 220 SITE 2 AC7 12 GLU B 251 TRP B 301 TRP B 309 GOL B 401 SITE 3 AC7 12 GOL B 402 HOH B 507 HOH B 547 HOH B 595 CRYST1 91.452 95.268 100.527 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010935 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010497 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009948 0.00000