HEADER VIRUS LIKE PARTICLE 22-FEB-21 7NLG TITLE S. CEREVISIAE TY1 P22 RESTRICTION FACTOR, GAG CA-CTD, AUG2 VARIANT TITLE 2 A273V MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: TY1 GAG P22; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: GAG CA-CTD, AUG2 VARIANT,CAPSID PROTEIN,TY1 P22 RESTRICTION COMPND 5 FACTOR; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 STRAIN: S288C; SOURCE 6 GENE: TY1A, GAG, TYA1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS RESTRICTION FACTOR, TY1, GAG, CA, VIRUS LIKE PARTICLE EXPDTA X-RAY DIFFRACTION AUTHOR M.A.COTTEE,I.A.TAYLOR REVDAT 2 01-MAY-24 7NLG 1 REMARK REVDAT 1 06-OCT-21 7NLG 0 JRNL AUTH M.A.COTTEE,S.L.BECKWITH,S.C.LETHAM,S.J.KIM,G.R.YOUNG, JRNL AUTH 2 J.P.STOYE,D.J.GARFINKEL,I.A.TAYLOR JRNL TITL STRUCTURE OF A TY1 RESTRICTION FACTOR REVEALS THE MOLECULAR JRNL TITL 2 BASIS OF TRANSPOSITION COPY NUMBER CONTROL. JRNL REF NAT COMMUN V. 12 5590 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 34552077 JRNL DOI 10.1038/S41467-021-25849-0 REMARK 2 REMARK 2 RESOLUTION. 3.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 91.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 11953 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.270 REMARK 3 FREE R VALUE TEST SET COUNT : 630 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 91.6100 - 6.0329 1.00 2436 137 0.2195 0.2640 REMARK 3 2 6.0329 - 4.7885 1.00 2255 141 0.2377 0.2775 REMARK 3 3 4.7885 - 4.1832 1.00 2219 127 0.1968 0.2320 REMARK 3 4 4.1832 - 3.8008 1.00 2204 121 0.2271 0.3173 REMARK 3 5 3.8008 - 3.5283 0.99 2209 104 0.2900 0.3631 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 187.6 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 261 THROUGH 350) REMARK 3 ORIGIN FOR THE GROUP (A): 123.9523 30.1161 -18.0790 REMARK 3 T TENSOR REMARK 3 T11: 1.7310 T22: 0.5414 REMARK 3 T33: 1.1244 T12: 0.2554 REMARK 3 T13: 0.1055 T23: 0.2549 REMARK 3 L TENSOR REMARK 3 L11: 0.9579 L22: 0.5419 REMARK 3 L33: 0.1098 L12: -0.1214 REMARK 3 L13: -0.0222 L23: 0.2285 REMARK 3 S TENSOR REMARK 3 S11: -0.2283 S12: -0.5359 S13: 0.1861 REMARK 3 S21: 0.5491 S22: 0.3678 S23: 0.3745 REMARK 3 S31: 0.6528 S32: 0.2388 S33: 0.0346 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 261 THROUGH 350) REMARK 3 ORIGIN FOR THE GROUP (A): 125.3614 14.2948 -38.2018 REMARK 3 T TENSOR REMARK 3 T11: 2.1406 T22: 0.8044 REMARK 3 T33: 1.6974 T12: 0.2718 REMARK 3 T13: -0.1614 T23: 0.2403 REMARK 3 L TENSOR REMARK 3 L11: 1.9224 L22: 1.3282 REMARK 3 L33: 0.2264 L12: 1.2261 REMARK 3 L13: 0.3391 L23: 0.4863 REMARK 3 S TENSOR REMARK 3 S11: -0.0966 S12: 0.5086 S13: -1.2889 REMARK 3 S21: -1.2795 S22: 0.3750 S23: 0.1906 REMARK 3 S31: -0.3565 S32: 0.0646 S33: 0.1701 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 261 THROUGH 350) REMARK 3 ORIGIN FOR THE GROUP (A): 114.4030 57.1636 -13.4652 REMARK 3 T TENSOR REMARK 3 T11: 2.4303 T22: 0.7780 REMARK 3 T33: 1.6605 T12: 1.9239 REMARK 3 T13: -0.0319 T23: 0.4683 REMARK 3 L TENSOR REMARK 3 L11: 0.1945 L22: 1.1686 REMARK 3 L33: 0.1521 L12: 0.2707 REMARK 3 L13: 0.1274 L23: 0.1168 REMARK 3 S TENSOR REMARK 3 S11: 0.3078 S12: 0.3939 S13: -0.2838 REMARK 3 S21: -0.7635 S22: -0.0497 S23: 0.1279 REMARK 3 S31: -0.8556 S32: -0.4481 S33: 0.7214 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 261 THROUGH 302 OR REMARK 3 RESID 304 THROUGH 322 OR RESID 324 REMARK 3 THROUGH 350)) REMARK 3 SELECTION : (CHAIN B AND (RESID 261 THROUGH 302 OR REMARK 3 RESID 304 THROUGH 322 OR RESID 324 REMARK 3 THROUGH 350)) REMARK 3 ATOM PAIRS NUMBER : 780 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 261 THROUGH 302 OR REMARK 3 RESID 304 THROUGH 322 OR RESID 324 REMARK 3 THROUGH 350)) REMARK 3 SELECTION : (CHAIN C AND (RESID 261 THROUGH 302 OR REMARK 3 RESID 304 THROUGH 322 OR RESID 324 REMARK 3 THROUGH 350)) REMARK 3 ATOM PAIRS NUMBER : 780 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7NLG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1292114117. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6-7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97951 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS 1.14.13 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11994 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.528 REMARK 200 RESOLUTION RANGE LOW (A) : 91.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 54.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 30.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: TY1 P22 REMARK 200 REMARK 200 REMARK: HEXAGONAL PRISMS OR RODS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 81.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 NL PROTEIN (30 MG/ML IN 20 MM TRIS REMARK 280 HCL PH 9.0, 150 MM NACL 1MM TCEP) 200 NL MOTHER LIQUOR (1.16M REMARK 280 LI2SO4, 0.1M MES PH 6.59), VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.61533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 13.30767 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 19.96150 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 6.65383 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.26917 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 26.61533 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 13.30767 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 6.65383 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 19.96150 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 33.26917 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -6.65383 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 259 REMARK 465 GLN A 260 REMARK 465 GLN A 351 REMARK 465 GLY A 352 REMARK 465 SER A 353 REMARK 465 ARG A 354 REMARK 465 ASN A 355 REMARK 465 PRO A 356 REMARK 465 LEU A 357 REMARK 465 GLU A 358 REMARK 465 HIS A 359 REMARK 465 HIS A 360 REMARK 465 HIS A 361 REMARK 465 HIS A 362 REMARK 465 HIS A 363 REMARK 465 HIS A 364 REMARK 465 MET B 259 REMARK 465 GLN B 260 REMARK 465 GLN B 351 REMARK 465 GLY B 352 REMARK 465 SER B 353 REMARK 465 ARG B 354 REMARK 465 ASN B 355 REMARK 465 PRO B 356 REMARK 465 LEU B 357 REMARK 465 GLU B 358 REMARK 465 HIS B 359 REMARK 465 HIS B 360 REMARK 465 HIS B 361 REMARK 465 HIS B 362 REMARK 465 HIS B 363 REMARK 465 HIS B 364 REMARK 465 MET C 259 REMARK 465 GLN C 260 REMARK 465 GLN C 351 REMARK 465 GLY C 352 REMARK 465 SER C 353 REMARK 465 ARG C 354 REMARK 465 ASN C 355 REMARK 465 PRO C 356 REMARK 465 LEU C 357 REMARK 465 GLU C 358 REMARK 465 HIS C 359 REMARK 465 HIS C 360 REMARK 465 HIS C 361 REMARK 465 HIS C 362 REMARK 465 HIS C 363 REMARK 465 HIS C 364 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 349 41.99 -90.92 REMARK 500 GLU B 349 41.27 -92.12 REMARK 500 GLU C 349 41.34 -90.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7NLI RELATED DB: PDB REMARK 900 DIFFERENT CONSTRUCT SAME LATTICE, SHARES RFREE SET REMARK 900 RELATED ID: 7NLH RELATED DB: PDB REMARK 900 DIFFERENT CONSTRUCT SAME LATTICE, SHARES RFREE SET DBREF 7NLG A 259 355 UNP P08405 TY1A_YEASX 259 355 DBREF 7NLG B 259 355 UNP P08405 TY1A_YEASX 259 355 DBREF 7NLG C 259 355 UNP P08405 TY1A_YEASX 259 355 SEQADV 7NLG VAL A 273 UNP P08405 ALA 273 ENGINEERED MUTATION SEQADV 7NLG PRO A 356 UNP P08405 EXPRESSION TAG SEQADV 7NLG LEU A 357 UNP P08405 EXPRESSION TAG SEQADV 7NLG GLU A 358 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS A 359 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS A 360 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS A 361 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS A 362 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS A 363 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS A 364 UNP P08405 EXPRESSION TAG SEQADV 7NLG VAL B 273 UNP P08405 ALA 273 ENGINEERED MUTATION SEQADV 7NLG PRO B 356 UNP P08405 EXPRESSION TAG SEQADV 7NLG LEU B 357 UNP P08405 EXPRESSION TAG SEQADV 7NLG GLU B 358 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS B 359 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS B 360 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS B 361 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS B 362 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS B 363 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS B 364 UNP P08405 EXPRESSION TAG SEQADV 7NLG VAL C 273 UNP P08405 ALA 273 ENGINEERED MUTATION SEQADV 7NLG PRO C 356 UNP P08405 EXPRESSION TAG SEQADV 7NLG LEU C 357 UNP P08405 EXPRESSION TAG SEQADV 7NLG GLU C 358 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS C 359 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS C 360 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS C 361 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS C 362 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS C 363 UNP P08405 EXPRESSION TAG SEQADV 7NLG HIS C 364 UNP P08405 EXPRESSION TAG SEQRES 1 A 106 MET GLN SER ASP THR GLN GLU ALA ASN ASP ILE VAL THR SEQRES 2 A 106 LEU VAL ASN LEU GLN TYR ASN GLY SER THR PRO ALA ASP SEQRES 3 A 106 ALA PHE GLU THR LYS VAL THR ASN ILE ILE ASP ARG LEU SEQRES 4 A 106 ASN ASN ASN GLY ILE HIS ILE ASN ASN LYS VAL ALA CYS SEQRES 5 A 106 GLN LEU ILE MET ARG GLY LEU SER GLY GLU TYR LYS PHE SEQRES 6 A 106 LEU ARG TYR THR ARG HIS ARG HIS LEU ASN MET THR VAL SEQRES 7 A 106 ALA GLU LEU PHE LEU ASP ILE HIS ALA ILE TYR GLU GLU SEQRES 8 A 106 GLN GLN GLY SER ARG ASN PRO LEU GLU HIS HIS HIS HIS SEQRES 9 A 106 HIS HIS SEQRES 1 B 106 MET GLN SER ASP THR GLN GLU ALA ASN ASP ILE VAL THR SEQRES 2 B 106 LEU VAL ASN LEU GLN TYR ASN GLY SER THR PRO ALA ASP SEQRES 3 B 106 ALA PHE GLU THR LYS VAL THR ASN ILE ILE ASP ARG LEU SEQRES 4 B 106 ASN ASN ASN GLY ILE HIS ILE ASN ASN LYS VAL ALA CYS SEQRES 5 B 106 GLN LEU ILE MET ARG GLY LEU SER GLY GLU TYR LYS PHE SEQRES 6 B 106 LEU ARG TYR THR ARG HIS ARG HIS LEU ASN MET THR VAL SEQRES 7 B 106 ALA GLU LEU PHE LEU ASP ILE HIS ALA ILE TYR GLU GLU SEQRES 8 B 106 GLN GLN GLY SER ARG ASN PRO LEU GLU HIS HIS HIS HIS SEQRES 9 B 106 HIS HIS SEQRES 1 C 106 MET GLN SER ASP THR GLN GLU ALA ASN ASP ILE VAL THR SEQRES 2 C 106 LEU VAL ASN LEU GLN TYR ASN GLY SER THR PRO ALA ASP SEQRES 3 C 106 ALA PHE GLU THR LYS VAL THR ASN ILE ILE ASP ARG LEU SEQRES 4 C 106 ASN ASN ASN GLY ILE HIS ILE ASN ASN LYS VAL ALA CYS SEQRES 5 C 106 GLN LEU ILE MET ARG GLY LEU SER GLY GLU TYR LYS PHE SEQRES 6 C 106 LEU ARG TYR THR ARG HIS ARG HIS LEU ASN MET THR VAL SEQRES 7 C 106 ALA GLU LEU PHE LEU ASP ILE HIS ALA ILE TYR GLU GLU SEQRES 8 C 106 GLN GLN GLY SER ARG ASN PRO LEU GLU HIS HIS HIS HIS SEQRES 9 C 106 HIS HIS HELIX 1 AA1 THR A 263 ASN A 274 1 12 HELIX 2 AA2 PRO A 282 ASN A 300 1 19 HELIX 3 AA3 ASN A 305 ARG A 315 1 11 HELIX 4 AA4 SER A 318 LYS A 322 5 5 HELIX 5 AA5 PHE A 323 ARG A 328 1 6 HELIX 6 AA6 THR A 335 GLU A 349 1 15 HELIX 7 AA7 THR B 263 ASN B 274 1 12 HELIX 8 AA8 PRO B 282 ASN B 300 1 19 HELIX 9 AA9 ASN B 305 ARG B 315 1 11 HELIX 10 AB1 SER B 318 LYS B 322 5 5 HELIX 11 AB2 PHE B 323 ARG B 328 1 6 HELIX 12 AB3 THR B 335 GLU B 349 1 15 HELIX 13 AB4 THR C 263 ASN C 274 1 12 HELIX 14 AB5 PRO C 282 ASN C 300 1 19 HELIX 15 AB6 ASN C 305 ARG C 315 1 11 HELIX 16 AB7 SER C 318 LYS C 322 5 5 HELIX 17 AB8 PHE C 323 ARG C 328 1 6 HELIX 18 AB9 THR C 335 GLU C 349 1 15 CRYST1 279.873 279.873 39.923 90.00 90.00 120.00 P 65 2 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003573 0.002063 0.000000 0.00000 SCALE2 0.000000 0.004126 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025048 0.00000