HEADER TRANSFERASE 22-FEB-21 7NLO TITLE CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ARGB IN COMPLEX WITH TITLE 2 L-ARGININE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYLGLUTAMATE KINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: N-ACETYL-L-GLUTAMATE 5-PHOSPHOTRANSFERASE,NAG KINASE,NAGK; COMPND 5 EC: 2.7.2.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 GENE: ARGB, RV1654, MTCY06H11.19; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ARGB ACETYLGLUTAMATE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR V.MENDES,S.E.THOMAS,J.CORY-WRIGHT,T.L.BLUNDELL REVDAT 2 31-JAN-24 7NLO 1 REMARK REVDAT 1 30-JUN-21 7NLO 0 JRNL AUTH P.GUPTA,S.E.THOMAS,S.A.ZAIDAN,M.A.PASILLAS,J.CORY-WRIGHT, JRNL AUTH 2 V.SEBASTIAN-PEREZ,A.BURGESS,E.CATTERMOLE,C.MEGHIR,C.ABELL, JRNL AUTH 3 A.G.COYNE,W.R.JACOBS,T.L.BLUNDELL,S.TIWARI,V.MENDES JRNL TITL A FRAGMENT-BASED APPROACH TO ASSESS THE LIGANDABILITY OF JRNL TITL 2 ARGB, ARGC, ARGD AND ARGF IN THE L-ARGININE BIOSYNTHETIC JRNL TITL 3 PATHWAY OF MYCOBACTERIUM TUBERCULOSIS JRNL REF COMPUT STRUCT BIOTECHNOL J V. 19 3491 2021 JRNL REFN ESSN 2001-0370 JRNL DOI 10.1016/J.CSBJ.2021.06.006 REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 37058 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1838 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 63.9690 - 4.2790 1.00 2812 135 0.1529 0.1529 REMARK 3 2 4.2790 - 3.3964 1.00 2741 138 0.1750 0.1799 REMARK 3 3 3.3964 - 2.9671 1.00 2728 134 0.2083 0.2281 REMARK 3 4 2.9671 - 2.6958 1.00 2697 164 0.2125 0.2461 REMARK 3 5 2.6958 - 2.5026 1.00 2687 166 0.2039 0.2457 REMARK 3 6 2.5026 - 2.3550 1.00 2717 119 0.1936 0.2281 REMARK 3 7 2.3550 - 2.2371 1.00 2706 153 0.1874 0.2312 REMARK 3 8 2.2371 - 2.1397 1.00 2703 109 0.1908 0.2100 REMARK 3 9 2.1397 - 2.0573 1.00 2705 140 0.2064 0.2300 REMARK 3 10 2.0573 - 1.9863 1.00 2679 152 0.2280 0.3068 REMARK 3 11 1.9863 - 1.9242 1.00 2656 140 0.2439 0.2439 REMARK 3 12 1.9242 - 1.8692 1.00 2696 151 0.2979 0.3105 REMARK 3 13 1.8692 - 1.8200 1.00 2693 137 0.3382 0.3382 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.22 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2176 REMARK 3 ANGLE : 0.859 2963 REMARK 3 CHIRALITY : 0.058 365 REMARK 3 PLANARITY : 0.005 381 REMARK 3 DIHEDRAL : 14.464 1295 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 6 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 121.3344 147.1643 30.7713 REMARK 3 T TENSOR REMARK 3 T11: 0.4229 T22: 0.3748 REMARK 3 T33: 0.4592 T12: 0.0288 REMARK 3 T13: 0.0384 T23: 0.1203 REMARK 3 L TENSOR REMARK 3 L11: 3.6888 L22: 3.4242 REMARK 3 L33: 2.2133 L12: 1.4718 REMARK 3 L13: 1.4610 L23: 1.5442 REMARK 3 S TENSOR REMARK 3 S11: 0.1394 S12: 0.0355 S13: 0.0030 REMARK 3 S21: -0.1974 S22: -0.0357 S23: -0.2041 REMARK 3 S31: 0.1290 S32: 0.0284 S33: -0.0880 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): 117.9393 138.8894 36.7675 REMARK 3 T TENSOR REMARK 3 T11: 0.4249 T22: 0.3545 REMARK 3 T33: 0.6721 T12: -0.0400 REMARK 3 T13: -0.0742 T23: 0.1032 REMARK 3 L TENSOR REMARK 3 L11: 4.3583 L22: 4.4785 REMARK 3 L33: 4.9694 L12: -4.3312 REMARK 3 L13: -0.6311 L23: 0.8898 REMARK 3 S TENSOR REMARK 3 S11: -0.0311 S12: -0.1423 S13: -0.5544 REMARK 3 S21: 0.6820 S22: 0.0516 S23: 0.6218 REMARK 3 S31: 0.2366 S32: 0.0939 S33: -0.0681 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): 107.7111 123.5413 25.4381 REMARK 3 T TENSOR REMARK 3 T11: 0.3813 T22: 0.4209 REMARK 3 T33: 0.3721 T12: 0.0267 REMARK 3 T13: 0.0072 T23: 0.0291 REMARK 3 L TENSOR REMARK 3 L11: 1.8055 L22: 2.9438 REMARK 3 L33: 1.9170 L12: -0.1269 REMARK 3 L13: 0.0411 L23: 1.1504 REMARK 3 S TENSOR REMARK 3 S11: -0.0516 S12: 0.3276 S13: 0.0255 REMARK 3 S21: -0.1976 S22: -0.2014 S23: 0.1135 REMARK 3 S31: -0.0171 S32: -0.0587 S33: 0.2539 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 193 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 122.1654 136.3215 17.3554 REMARK 3 T TENSOR REMARK 3 T11: 0.5128 T22: 0.4692 REMARK 3 T33: 0.4896 T12: 0.0711 REMARK 3 T13: -0.0700 T23: 0.0797 REMARK 3 L TENSOR REMARK 3 L11: 3.0955 L22: 1.7124 REMARK 3 L33: 1.5715 L12: 1.2457 REMARK 3 L13: -1.4610 L23: 0.3992 REMARK 3 S TENSOR REMARK 3 S11: -0.0885 S12: 0.2943 S13: -0.2763 REMARK 3 S21: -0.1894 S22: 0.0986 S23: -0.3487 REMARK 3 S31: 0.2199 S32: 0.1626 S33: -0.0350 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 231 THROUGH 260 ) REMARK 3 ORIGIN FOR THE GROUP (A): 120.4879 135.1521 10.1708 REMARK 3 T TENSOR REMARK 3 T11: 0.8185 T22: 0.6350 REMARK 3 T33: 0.5340 T12: 0.0321 REMARK 3 T13: 0.0119 T23: 0.0254 REMARK 3 L TENSOR REMARK 3 L11: 3.7708 L22: 5.5257 REMARK 3 L33: 5.8176 L12: -0.5043 REMARK 3 L13: 0.7552 L23: -2.4182 REMARK 3 S TENSOR REMARK 3 S11: -0.1745 S12: 0.5481 S13: -0.4765 REMARK 3 S21: -0.7485 S22: 0.1385 S23: -0.0448 REMARK 3 S31: 0.6667 S32: 0.2934 S33: 0.0417 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 261 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): 121.9252 142.6969 22.6307 REMARK 3 T TENSOR REMARK 3 T11: 0.4827 T22: 0.3757 REMARK 3 T33: 0.4700 T12: 0.0550 REMARK 3 T13: -0.0463 T23: 0.1174 REMARK 3 L TENSOR REMARK 3 L11: 2.2310 L22: 3.3563 REMARK 3 L33: 2.7098 L12: 1.0375 REMARK 3 L13: -0.6571 L23: 0.4641 REMARK 3 S TENSOR REMARK 3 S11: 0.0484 S12: 0.4365 S13: 0.3469 REMARK 3 S21: -0.5256 S22: 0.0997 S23: 0.0508 REMARK 3 S31: 0.1091 S32: 0.1165 S33: -0.2070 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 301 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): 122.5659 147.2264 21.3928 REMARK 3 T TENSOR REMARK 3 T11: 0.5717 T22: 0.5076 REMARK 3 T33: 0.6492 T12: 0.0643 REMARK 3 T13: -0.0471 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 3.9668 L22: 3.7327 REMARK 3 L33: 4.0153 L12: 0.3747 REMARK 3 L13: -0.3384 L23: 3.7886 REMARK 3 S TENSOR REMARK 3 S11: -0.5452 S12: -0.3535 S13: -0.5131 REMARK 3 S21: -0.0395 S22: 0.3924 S23: 0.4681 REMARK 3 S31: 0.1986 S32: 0.3528 S33: 0.1327 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7NLO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1292114239. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.23 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37098 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 63.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.00 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.10 REMARK 200 R MERGE FOR SHELL (I) : 1.02700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.0 REMARK 200 STARTING MODEL: 2AP9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1260 MM AMMONIUM SULPHATE 100 MM CHES REMARK 280 PH 9.5 200 MM NACL, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 87.64900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.60417 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 23.51233 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 87.64900 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 50.60417 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 23.51233 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 87.64900 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 50.60417 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 23.51233 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 87.64900 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 50.60417 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 23.51233 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 87.64900 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 50.60417 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 23.51233 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 87.64900 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 50.60417 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 23.51233 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 101.20835 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 47.02467 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 101.20835 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 47.02467 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 101.20835 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 47.02467 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 101.20835 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 47.02467 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 101.20835 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 47.02467 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 101.20835 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 47.02467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 63220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 262.94700 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 151.81252 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 303.62504 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 70.53700 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 303.62504 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 70.53700 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 262.94700 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 151.81252 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 70.53700 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 SER A 2 REMARK 465 ARG A 3 REMARK 465 ILE A 4 REMARK 465 GLU A 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 112 CG CD OE1 OE2 REMARK 470 ARG A 225 NE CZ NH1 NH2 REMARK 470 GLN A 239 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 108 -60.35 -137.03 REMARK 500 ASN A 118 0.85 -68.58 REMARK 500 ASP A 158 -68.83 -99.85 REMARK 500 ALA A 171 4.11 -69.26 REMARK 500 ASP A 214 42.64 -100.87 REMARK 500 ARG A 221 57.47 -141.45 REMARK 500 SER A 246 -52.54 -27.58 REMARK 500 THR A 287 62.95 -151.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ARG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NHE A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 303 DBREF 7NLO A 2 294 UNP P9WQ01 ARGB_MYCTU 2 294 SEQADV 7NLO GLY A -2 UNP P9WQ01 EXPRESSION TAG SEQADV 7NLO SER A -1 UNP P9WQ01 EXPRESSION TAG SEQADV 7NLO MET A 0 UNP P9WQ01 EXPRESSION TAG SEQADV 7NLO VAL A 1 UNP P9WQ01 EXPRESSION TAG SEQRES 1 A 297 GLY SER MET VAL SER ARG ILE GLU ALA LEU PRO THR HIS SEQRES 2 A 297 ILE LYS ALA GLN VAL LEU ALA GLU ALA LEU PRO TRP LEU SEQRES 3 A 297 LYS GLN LEU HIS GLY LYS VAL VAL VAL VAL LYS TYR GLY SEQRES 4 A 297 GLY ASN ALA MET THR ASP ASP THR LEU ARG ARG ALA PHE SEQRES 5 A 297 ALA ALA ASP MET ALA PHE LEU ARG ASN CYS GLY ILE HIS SEQRES 6 A 297 PRO VAL VAL VAL HIS GLY GLY GLY PRO GLN ILE THR ALA SEQRES 7 A 297 MET LEU ARG ARG LEU GLY ILE GLU GLY ASP PHE LYS GLY SEQRES 8 A 297 GLY PHE ARG VAL THR THR PRO GLU VAL LEU ASP VAL ALA SEQRES 9 A 297 ARG MET VAL LEU PHE GLY GLN VAL GLY ARG GLU LEU VAL SEQRES 10 A 297 ASN LEU ILE ASN ALA HIS GLY PRO TYR ALA VAL GLY ILE SEQRES 11 A 297 THR GLY GLU ASP ALA GLN LEU PHE THR ALA VAL ARG ARG SEQRES 12 A 297 SER VAL THR VAL ASP GLY VAL ALA THR ASP ILE GLY LEU SEQRES 13 A 297 VAL GLY ASP VAL ASP GLN VAL ASN THR ALA ALA MET LEU SEQRES 14 A 297 ASP LEU VAL ALA ALA GLY ARG ILE PRO VAL VAL SER THR SEQRES 15 A 297 LEU ALA PRO ASP ALA ASP GLY VAL VAL HIS ASN ILE ASN SEQRES 16 A 297 ALA ASP THR ALA ALA ALA ALA VAL ALA GLU ALA LEU GLY SEQRES 17 A 297 ALA GLU LYS LEU LEU MET LEU THR ASP ILE ASP GLY LEU SEQRES 18 A 297 TYR THR ARG TRP PRO ASP ARG ASP SER LEU VAL SER GLU SEQRES 19 A 297 ILE ASP THR GLY THR LEU ALA GLN LEU LEU PRO THR LEU SEQRES 20 A 297 GLU SER GLY MET VAL PRO LYS VAL GLU ALA CYS LEU ARG SEQRES 21 A 297 ALA VAL ILE GLY GLY VAL PRO SER ALA HIS ILE ILE ASP SEQRES 22 A 297 GLY ARG VAL THR HIS CYS VAL LEU VAL GLU LEU PHE THR SEQRES 23 A 297 ASP ALA GLY THR GLY THR LYS VAL VAL ARG GLY HET ARG A 301 12 HET NHE A 302 13 HET EDO A 303 4 HETNAM ARG ARGININE HETNAM NHE 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID HETNAM EDO 1,2-ETHANEDIOL HETSYN NHE N-CYCLOHEXYLTAURINE; CHES HETSYN EDO ETHYLENE GLYCOL FORMUL 2 ARG C6 H15 N4 O2 1+ FORMUL 3 NHE C8 H17 N O3 S FORMUL 4 EDO C2 H6 O2 FORMUL 5 HOH *128(H2 O) HELIX 1 AA1 PRO A 8 ALA A 19 1 12 HELIX 2 AA2 ALA A 19 HIS A 27 1 9 HELIX 3 AA3 GLY A 36 THR A 41 5 6 HELIX 4 AA4 ASP A 42 ASN A 58 1 17 HELIX 5 AA5 GLY A 69 LEU A 80 1 12 HELIX 6 AA6 THR A 94 GLN A 108 1 15 HELIX 7 AA7 GLN A 108 ASN A 118 1 11 HELIX 8 AA8 GLU A 130 GLN A 133 5 4 HELIX 9 AA9 ASN A 161 ALA A 171 1 11 HELIX 10 AB1 ASN A 192 GLY A 205 1 14 HELIX 11 AB2 ASP A 224 ASP A 226 5 3 HELIX 12 AB3 THR A 234 LEU A 241 1 8 HELIX 13 AB4 PRO A 242 LEU A 244 5 3 HELIX 14 AB5 GLY A 247 GLY A 261 1 15 HELIX 15 AB6 HIS A 275 THR A 283 1 9 SHEET 1 AA1 8 ALA A 124 ILE A 127 0 SHEET 2 AA1 8 ILE A 174 SER A 178 1 O VAL A 176 N VAL A 125 SHEET 3 AA1 8 HIS A 62 HIS A 67 1 N VAL A 65 O VAL A 177 SHEET 4 AA1 8 VAL A 30 TYR A 35 1 N VAL A 33 O VAL A 64 SHEET 5 AA1 8 LYS A 208 THR A 213 1 O LEU A 210 N LYS A 34 SHEET 6 AA1 8 SER A 265 ASP A 270 1 O HIS A 267 N MET A 211 SHEET 7 AA1 8 GLY A 288 VAL A 292 -1 O VAL A 291 N ALA A 266 SHEET 8 AA1 8 GLU A 231 ASP A 233 1 N ILE A 232 O LYS A 290 SHEET 1 AA2 2 PHE A 86 LYS A 87 0 SHEET 2 AA2 2 PHE A 90 ARG A 91 -1 O PHE A 90 N LYS A 87 SHEET 1 AA3 4 PHE A 135 ARG A 139 0 SHEET 2 AA3 4 VAL A 154 VAL A 160 -1 O ASP A 158 N THR A 136 SHEET 3 AA3 4 VAL A 188 ILE A 191 1 O ASN A 190 N GLY A 155 SHEET 4 AA3 4 LEU A 180 PRO A 182 -1 N ALA A 181 O HIS A 189 SHEET 1 AA4 2 VAL A 142 VAL A 144 0 SHEET 2 AA4 2 VAL A 147 THR A 149 -1 O THR A 149 N VAL A 142 SHEET 1 AA5 2 LEU A 218 TYR A 219 0 SHEET 2 AA5 2 LEU A 228 VAL A 229 -1 O VAL A 229 N LEU A 218 CISPEP 1 TRP A 222 PRO A 223 0 4.01 SITE 1 AC1 13 TRP A 22 LYS A 208 SER A 230 HIS A 267 SITE 2 AC1 13 GLU A 280 LEU A 281 THR A 283 ASP A 284 SITE 3 AC1 13 ALA A 285 GLY A 286 GLY A 288 THR A 289 SITE 4 AC1 13 LYS A 290 SITE 1 AC2 9 ASP A 99 ARG A 102 ASN A 115 ASP A 185 SITE 2 AC2 9 GLY A 186 VAL A 188 HOH A 404 HOH A 437 SITE 3 AC2 9 HOH A 474 SITE 1 AC3 4 THR A 74 ARG A 78 ARG A 91 HOH A 456 CRYST1 175.298 175.298 70.537 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005705 0.003294 0.000000 0.00000 SCALE2 0.000000 0.006587 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014177 0.00000