HEADER TRANSFERASE 22-FEB-21 7NLU TITLE CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ARGB IN COMPLEX WITH TITLE 2 1-(1H-INDOL-3-YL)ETHAN-1-ONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYLGLUTAMATE KINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: N-ACETYL-L-GLUTAMATE 5-PHOSPHOTRANSFERASE,NAG KINASE,NAGK; COMPND 5 EC: 2.7.2.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 GENE: ARGB, RV1654, MTCY06H11.19; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ARGB ACETYLGLUTAMATE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR V.MENDES,S.E.THOMAS,J.CORY-WRIGHT,T.L.BLUNDELL REVDAT 2 31-JAN-24 7NLU 1 REMARK REVDAT 1 30-JUN-21 7NLU 0 JRNL AUTH P.GUPTA,S.E.THOMAS,S.A.ZAIDAN,M.A.PASILLAS,J.CORY-WRIGHT, JRNL AUTH 2 V.SEBASTIAN-PEREZ,A.BURGESS,E.CATTERMOLE,C.MEGHIR,C.ABELL, JRNL AUTH 3 A.G.COYNE,W.R.JACOBS,T.L.BLUNDELL,S.TIWARI,V.MENDES JRNL TITL A FRAGMENT-BASED APPROACH TO ASSESS THE LIGANDABILITY OF JRNL TITL 2 ARGB, ARGC, ARGD AND ARGF IN THE L-ARGININE BIOSYNTHETIC JRNL TITL 3 PATHWAY OF MYCOBACTERIUM TUBERCULOSIS JRNL REF COMPUT STRUCT BIOTECHNOL J V. 19 3491 2021 JRNL REFN ESSN 2001-0370 JRNL DOI 10.1016/J.CSBJ.2021.06.006 REMARK 2 REMARK 2 RESOLUTION. 2.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 20208 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 988 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.5320 - 4.2709 0.99 2810 139 0.1564 0.1787 REMARK 3 2 4.2709 - 3.3922 1.00 2743 155 0.1900 0.2539 REMARK 3 3 3.3922 - 2.9640 1.00 2753 140 0.2447 0.2827 REMARK 3 4 2.9640 - 2.6933 1.00 2715 157 0.2413 0.2726 REMARK 3 5 2.6933 - 2.5004 1.00 2748 149 0.2461 0.3191 REMARK 3 6 2.5004 - 2.3531 1.00 2727 115 0.2644 0.3206 REMARK 3 7 2.3531 - 2.2353 1.00 2724 133 0.2909 0.3290 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 60.33 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2166 REMARK 3 ANGLE : 1.111 2958 REMARK 3 CHIRALITY : 0.062 365 REMARK 3 PLANARITY : 0.006 380 REMARK 3 DIHEDRAL : 16.270 1272 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.9408 2.9311 33.9266 REMARK 3 T TENSOR REMARK 3 T11: 0.5780 T22: 0.7008 REMARK 3 T33: 0.9937 T12: -0.0152 REMARK 3 T13: 0.1188 T23: 0.1011 REMARK 3 L TENSOR REMARK 3 L11: 9.8814 L22: 6.0695 REMARK 3 L33: 2.6648 L12: 3.4921 REMARK 3 L13: 4.8903 L23: 2.8030 REMARK 3 S TENSOR REMARK 3 S11: 0.2300 S12: -0.1627 S13: 0.3204 REMARK 3 S21: -0.2001 S22: 0.0525 S23: -0.3812 REMARK 3 S31: -0.1023 S32: 0.4048 S33: -0.1218 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.3271 -14.0665 33.3831 REMARK 3 T TENSOR REMARK 3 T11: 0.4408 T22: 0.4008 REMARK 3 T33: 0.6758 T12: 0.0559 REMARK 3 T13: 0.0294 T23: 0.1434 REMARK 3 L TENSOR REMARK 3 L11: 5.8122 L22: 2.6894 REMARK 3 L33: 7.0793 L12: 3.2859 REMARK 3 L13: 0.6062 L23: 2.2812 REMARK 3 S TENSOR REMARK 3 S11: 0.1449 S12: -0.1153 S13: 0.3908 REMARK 3 S21: 0.1857 S22: -0.1469 S23: -0.2667 REMARK 3 S31: 0.1250 S32: 0.4299 S33: 0.0126 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.2607 -26.4401 25.4934 REMARK 3 T TENSOR REMARK 3 T11: 0.4888 T22: 0.5438 REMARK 3 T33: 0.5497 T12: 0.1281 REMARK 3 T13: 0.0284 T23: 0.0587 REMARK 3 L TENSOR REMARK 3 L11: 2.0895 L22: 4.2783 REMARK 3 L33: 2.0681 L12: 0.0372 REMARK 3 L13: 0.5300 L23: 0.5173 REMARK 3 S TENSOR REMARK 3 S11: 0.0676 S12: 0.4472 S13: 0.1612 REMARK 3 S21: -0.2023 S22: -0.1151 S23: 0.1919 REMARK 3 S31: 0.0497 S32: 0.0190 S33: 0.0443 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 214 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.2709 -16.6221 14.2476 REMARK 3 T TENSOR REMARK 3 T11: 0.8213 T22: 0.9957 REMARK 3 T33: 1.1725 T12: 0.1448 REMARK 3 T13: 0.0855 T23: -0.0357 REMARK 3 L TENSOR REMARK 3 L11: 4.3087 L22: 6.0422 REMARK 3 L33: 3.1150 L12: -0.2370 REMARK 3 L13: 0.5881 L23: 0.7194 REMARK 3 S TENSOR REMARK 3 S11: -0.2101 S12: 0.2754 S13: -0.7633 REMARK 3 S21: -0.1914 S22: -0.2266 S23: -0.5056 REMARK 3 S31: -0.2737 S32: 0.8486 S33: 0.2785 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 231 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.9375 -13.1801 16.8395 REMARK 3 T TENSOR REMARK 3 T11: 0.7030 T22: 0.6238 REMARK 3 T33: 0.8173 T12: 0.0895 REMARK 3 T13: 0.0940 T23: 0.1751 REMARK 3 L TENSOR REMARK 3 L11: 1.8656 L22: 2.6981 REMARK 3 L33: 6.1404 L12: 1.1550 REMARK 3 L13: -0.2737 L23: 2.1704 REMARK 3 S TENSOR REMARK 3 S11: -0.0967 S12: 0.4524 S13: 0.0968 REMARK 3 S21: -0.6104 S22: 0.2126 S23: -0.4951 REMARK 3 S31: -0.0980 S32: 0.4893 S33: -0.1173 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7NLU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1292114246. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.31 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20234 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.235 REMARK 200 RESOLUTION RANGE LOW (A) : 64.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.900 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.10 REMARK 200 R MERGE FOR SHELL (I) : 1.00300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.0 REMARK 200 STARTING MODEL: 2AP9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1260 MM AMMONIUM SULPHATE 100 MM CHES REMARK 280 PH 9.5 200 MM NACL, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 87.24350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.37006 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 23.91000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 87.24350 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 50.37006 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 23.91000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 87.24350 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 50.37006 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 23.91000 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 87.24350 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 50.37006 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 23.91000 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 87.24350 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 50.37006 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 23.91000 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 87.24350 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 50.37006 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 23.91000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 100.74012 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 47.82000 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 100.74012 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 47.82000 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 100.74012 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 47.82000 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 100.74012 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 47.82000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 100.74012 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 47.82000 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 100.74012 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 47.82000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 63160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -242.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 71.73000 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 71.73000 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 71.73000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 302 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 SER A 2 REMARK 465 ARG A 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 38 CG OD1 ND2 REMARK 470 ARG A 57 NE CZ NH1 NH2 REMARK 470 ARG A 140 CG CD NE CZ NH1 NH2 REMARK 470 THR A 143 OG1 CG2 REMARK 470 ASP A 145 CG OD1 OD2 REMARK 470 ARG A 225 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 226 CG OD1 OD2 REMARK 470 GLN A 239 CG CD OE1 NE2 REMARK 470 GLU A 245 CG CD OE1 OE2 REMARK 470 SER A 246 OG REMARK 470 ARG A 257 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 290 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 108 -65.98 -125.67 REMARK 500 ASN A 118 4.79 -65.99 REMARK 500 ALA A 132 23.41 46.95 REMARK 500 ASP A 145 70.75 42.45 REMARK 500 ASP A 158 -74.54 -94.84 REMARK 500 PRO A 242 17.81 -68.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5RN A 303 DBREF 7NLU A 2 294 UNP P9WQ01 ARGB_MYCTU 2 294 SEQADV 7NLU GLY A -2 UNP P9WQ01 EXPRESSION TAG SEQADV 7NLU SER A -1 UNP P9WQ01 EXPRESSION TAG SEQADV 7NLU MET A 0 UNP P9WQ01 EXPRESSION TAG SEQADV 7NLU VAL A 1 UNP P9WQ01 EXPRESSION TAG SEQRES 1 A 297 GLY SER MET VAL SER ARG ILE GLU ALA LEU PRO THR HIS SEQRES 2 A 297 ILE LYS ALA GLN VAL LEU ALA GLU ALA LEU PRO TRP LEU SEQRES 3 A 297 LYS GLN LEU HIS GLY LYS VAL VAL VAL VAL LYS TYR GLY SEQRES 4 A 297 GLY ASN ALA MET THR ASP ASP THR LEU ARG ARG ALA PHE SEQRES 5 A 297 ALA ALA ASP MET ALA PHE LEU ARG ASN CYS GLY ILE HIS SEQRES 6 A 297 PRO VAL VAL VAL HIS GLY GLY GLY PRO GLN ILE THR ALA SEQRES 7 A 297 MET LEU ARG ARG LEU GLY ILE GLU GLY ASP PHE LYS GLY SEQRES 8 A 297 GLY PHE ARG VAL THR THR PRO GLU VAL LEU ASP VAL ALA SEQRES 9 A 297 ARG MET VAL LEU PHE GLY GLN VAL GLY ARG GLU LEU VAL SEQRES 10 A 297 ASN LEU ILE ASN ALA HIS GLY PRO TYR ALA VAL GLY ILE SEQRES 11 A 297 THR GLY GLU ASP ALA GLN LEU PHE THR ALA VAL ARG ARG SEQRES 12 A 297 SER VAL THR VAL ASP GLY VAL ALA THR ASP ILE GLY LEU SEQRES 13 A 297 VAL GLY ASP VAL ASP GLN VAL ASN THR ALA ALA MET LEU SEQRES 14 A 297 ASP LEU VAL ALA ALA GLY ARG ILE PRO VAL VAL SER THR SEQRES 15 A 297 LEU ALA PRO ASP ALA ASP GLY VAL VAL HIS ASN ILE ASN SEQRES 16 A 297 ALA ASP THR ALA ALA ALA ALA VAL ALA GLU ALA LEU GLY SEQRES 17 A 297 ALA GLU LYS LEU LEU MET LEU THR ASP ILE ASP GLY LEU SEQRES 18 A 297 TYR THR ARG TRP PRO ASP ARG ASP SER LEU VAL SER GLU SEQRES 19 A 297 ILE ASP THR GLY THR LEU ALA GLN LEU LEU PRO THR LEU SEQRES 20 A 297 GLU SER GLY MET VAL PRO LYS VAL GLU ALA CYS LEU ARG SEQRES 21 A 297 ALA VAL ILE GLY GLY VAL PRO SER ALA HIS ILE ILE ASP SEQRES 22 A 297 GLY ARG VAL THR HIS CYS VAL LEU VAL GLU LEU PHE THR SEQRES 23 A 297 ASP ALA GLY THR GLY THR LYS VAL VAL ARG GLY HET SO4 A 301 5 HET SO4 A 302 5 HET 5RN A 303 12 HETNAM SO4 SULFATE ION HETNAM 5RN 1-(1~{H}-INDOL-3-YL)ETHANONE FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 5RN C10 H9 N O FORMUL 5 HOH *14(H2 O) HELIX 1 AA1 PRO A 8 GLU A 18 1 11 HELIX 2 AA2 ALA A 19 HIS A 27 1 9 HELIX 3 AA3 GLY A 37 ASP A 42 1 6 HELIX 4 AA4 ASP A 42 ASN A 58 1 17 HELIX 5 AA5 GLY A 69 LEU A 80 1 12 HELIX 6 AA6 THR A 94 GLN A 108 1 15 HELIX 7 AA7 GLN A 108 ASN A 118 1 11 HELIX 8 AA8 GLU A 130 GLN A 133 5 4 HELIX 9 AA9 ASN A 161 ALA A 171 1 11 HELIX 10 AB1 ASN A 192 LEU A 204 1 13 HELIX 11 AB2 ASP A 224 LEU A 228 5 5 HELIX 12 AB3 THR A 234 LEU A 241 1 8 HELIX 13 AB4 PRO A 242 LEU A 244 5 3 HELIX 14 AB5 GLY A 247 GLY A 261 1 15 HELIX 15 AB6 HIS A 275 THR A 283 1 9 SHEET 1 AA1 8 ALA A 124 ILE A 127 0 SHEET 2 AA1 8 ILE A 174 SER A 178 1 O VAL A 176 N VAL A 125 SHEET 3 AA1 8 HIS A 62 HIS A 67 1 N VAL A 65 O VAL A 177 SHEET 4 AA1 8 VAL A 30 TYR A 35 1 N VAL A 33 O VAL A 64 SHEET 5 AA1 8 LYS A 208 THR A 213 1 O LEU A 210 N LYS A 34 SHEET 6 AA1 8 SER A 265 ASP A 270 1 O HIS A 267 N LEU A 209 SHEET 7 AA1 8 THR A 289 VAL A 292 -1 O VAL A 291 N ALA A 266 SHEET 8 AA1 8 GLU A 231 ASP A 233 1 N ILE A 232 O LYS A 290 SHEET 1 AA2 2 PHE A 86 LYS A 87 0 SHEET 2 AA2 2 PHE A 90 ARG A 91 -1 O PHE A 90 N LYS A 87 SHEET 1 AA3 4 PHE A 135 ARG A 139 0 SHEET 2 AA3 4 VAL A 154 VAL A 160 -1 O ASP A 158 N THR A 136 SHEET 3 AA3 4 VAL A 188 ILE A 191 1 O ASN A 190 N GLY A 155 SHEET 4 AA3 4 LEU A 180 PRO A 182 -1 N ALA A 181 O HIS A 189 SHEET 1 AA4 2 VAL A 142 VAL A 144 0 SHEET 2 AA4 2 VAL A 147 THR A 149 -1 O THR A 149 N VAL A 142 CISPEP 1 TRP A 222 PRO A 223 0 2.40 SITE 1 AC1 3 TRP A 22 LYS A 208 LYS A 290 SITE 1 AC2 3 ARG A 78 PHE A 86 ARG A 91 SITE 1 AC3 2 VAL A 125 LEU A 168 CRYST1 174.487 174.487 71.730 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005731 0.003309 0.000000 0.00000 SCALE2 0.000000 0.006618 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013941 0.00000