HEADER CELL INVASION 23-FEB-21 7NMS TITLE INLB392_T332E: T332E VARIANT OF LISTERIA MONOCYTOGENES INLB TITLE 2 (INTERNALIN B) RESIDUES 36-392 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERNALIN B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: INLB,INVASION PROTEIN INLB; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: RESIDUE 36 TO 392 OF INLB SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES SEROVAR 1/2A (STRAIN SOURCE 3 ATCC BAA-679 / EGD-E); SOURCE 4 ORGANISM_TAXID: 169963; SOURCE 5 STRAIN: ATCC BAA-679 / EGD-E; SOURCE 6 GENE: INLB, LMO0434; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: CODON PLUS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS LEUCINE RICH REPEAT, PROTEIN BINDING, PATHOGENICITY, VIRULENCE KEYWDS 2 FACTOR, CELL INVASION EXPDTA X-RAY DIFFRACTION AUTHOR C.GEERDS,H.H.NIEMANN REVDAT 3 31-JAN-24 7NMS 1 REMARK REVDAT 2 16-MAR-22 7NMS 1 JRNL REVDAT 1 26-JAN-22 7NMS 0 JRNL AUTH C.GEERDS,W.M.BLEYMULLER,T.MEYER,C.WIDMANN,H.H.NIEMANN JRNL TITL A RECURRING PACKING CONTACT IN CRYSTALS OF INLB PINPOINTS JRNL TITL 2 FUNCTIONAL BINDING SITES IN THE INTERNALIN DOMAIN AND THE B JRNL TITL 3 REPEAT. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 78 310 2022 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 35234145 JRNL DOI 10.1107/S2059798322000432 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_3965 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 37230 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1871 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.7700 - 4.2300 0.99 2908 135 0.1575 0.1966 REMARK 3 2 4.2300 - 3.3600 1.00 2756 156 0.1430 0.2025 REMARK 3 3 3.3600 - 2.9300 1.00 2760 150 0.1791 0.2066 REMARK 3 4 2.9300 - 2.6700 1.00 2742 138 0.1774 0.2377 REMARK 3 5 2.6700 - 2.4700 1.00 2700 153 0.1674 0.1924 REMARK 3 6 2.4700 - 2.3300 1.00 2715 147 0.1631 0.2074 REMARK 3 7 2.3300 - 2.2100 1.00 2712 145 0.1690 0.2208 REMARK 3 8 2.2100 - 2.1200 1.00 2680 152 0.1837 0.2344 REMARK 3 9 2.1200 - 2.0300 1.00 2669 153 0.1984 0.2593 REMARK 3 10 2.0300 - 1.9600 1.00 2665 153 0.2145 0.2471 REMARK 3 11 1.9600 - 1.9000 0.99 2657 153 0.2419 0.2857 REMARK 3 12 1.9000 - 1.8500 1.00 2712 109 0.2620 0.3235 REMARK 3 13 1.8500 - 1.8000 1.00 2683 127 0.2898 0.3538 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.219 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.036 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2942 REMARK 3 ANGLE : 0.647 4002 REMARK 3 CHIRALITY : 0.046 466 REMARK 3 PLANARITY : 0.005 509 REMARK 3 DIHEDRAL : 11.912 1100 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5307 28.1411 -27.2398 REMARK 3 T TENSOR REMARK 3 T11: 0.3392 T22: 0.3243 REMARK 3 T33: 0.3266 T12: -0.0271 REMARK 3 T13: 0.0015 T23: -0.0445 REMARK 3 L TENSOR REMARK 3 L11: 2.7605 L22: 5.2006 REMARK 3 L33: 5.6577 L12: -0.1150 REMARK 3 L13: 1.5754 L23: -1.9149 REMARK 3 S TENSOR REMARK 3 S11: -0.1429 S12: 0.1584 S13: 0.1623 REMARK 3 S21: -0.3014 S22: 0.0938 S23: 0.2079 REMARK 3 S31: -0.2100 S32: -0.2165 S33: 0.0630 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 149 THROUGH 244 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5900 12.6727 -5.7648 REMARK 3 T TENSOR REMARK 3 T11: 0.2950 T22: 0.2500 REMARK 3 T33: 0.2827 T12: -0.0315 REMARK 3 T13: 0.0220 T23: -0.0297 REMARK 3 L TENSOR REMARK 3 L11: 1.1551 L22: 3.0714 REMARK 3 L33: 3.5810 L12: 0.7805 REMARK 3 L13: -0.2577 L23: -2.1393 REMARK 3 S TENSOR REMARK 3 S11: -0.0414 S12: 0.0513 S13: 0.0117 REMARK 3 S21: 0.1274 S22: -0.0147 S23: -0.0934 REMARK 3 S31: -0.2542 S32: 0.1342 S33: 0.0525 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 245 THROUGH 339 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3726 -12.5575 5.0704 REMARK 3 T TENSOR REMARK 3 T11: 0.1975 T22: 0.2591 REMARK 3 T33: 0.2378 T12: -0.0231 REMARK 3 T13: 0.0323 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: 0.4721 L22: 5.0097 REMARK 3 L33: 1.3327 L12: -0.9683 REMARK 3 L13: -0.1657 L23: 2.0042 REMARK 3 S TENSOR REMARK 3 S11: -0.0264 S12: -0.0714 S13: -0.0651 REMARK 3 S21: -0.0163 S22: 0.0150 S23: 0.0770 REMARK 3 S31: -0.0908 S32: 0.0303 S33: 0.0267 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 340 THROUGH 392 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.2923 -40.1069 -15.8014 REMARK 3 T TENSOR REMARK 3 T11: 0.2374 T22: 0.3583 REMARK 3 T33: 0.2978 T12: -0.0480 REMARK 3 T13: -0.0557 T23: -0.0417 REMARK 3 L TENSOR REMARK 3 L11: 5.9948 L22: 6.1333 REMARK 3 L33: 3.5633 L12: -2.9981 REMARK 3 L13: -2.7467 L23: 1.9226 REMARK 3 S TENSOR REMARK 3 S11: 0.0441 S12: 0.5356 S13: -0.2457 REMARK 3 S21: -0.2586 S22: -0.2277 S23: 0.1645 REMARK 3 S31: -0.0469 S32: -0.2393 S33: 0.1669 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7NMS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1292112190. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION JAN 26, 2018 REMARK 200 BUILT=20180307 REMARK 200 DATA SCALING SOFTWARE : XSCALE VERSION JAN 26, 2018 REMARK 200 BUILT=20180307 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37383 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.5900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.880 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1H6T, 2Y5P REMARK 200 REMARK 200 REMARK: ROD REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RESERVOIR SOLUTION: 0.1 M SUCCINATE, REMARK 280 PH 7.0, 0.2 M LI2SO4, 22.5 % PEG MIXTURE CONSISTING OF EQUAL REMARK 280 AMOUNTS OF EIGHT LOW MOLECULAR WEIGHT PEGS (PEG 300, PEG 400, REMARK 280 PEG 500MME, PEG 550MME, PEG 600, PEG 750MME, PEG 1,000, PEG 1, REMARK 280 000MME); PROTEIN SOLUTION: 10 MG/ML IN 10 MM TRIS, PH 8.0, 20 MM REMARK 280 NACL; DROP SIZE: 100 NL + 100 NL (PROTEIN + RESERVOIR), VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.70500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.01000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.36500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.01000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.70500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.36500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 31 REMARK 465 PRO A 32 REMARK 465 LEU A 33 REMARK 465 GLY A 34 REMARK 465 SER A 35 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 83 52.72 -148.52 REMARK 500 LEU A 97 77.96 -111.58 REMARK 500 ASN A 108 -162.82 -117.21 REMARK 500 THR A 111 -59.79 -122.00 REMARK 500 ASN A 130 -159.21 -125.12 REMARK 500 ASN A 174 -157.60 -130.78 REMARK 500 ASN A 196 -158.32 -132.05 REMARK 500 ASN A 218 -157.03 -131.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 829 DISTANCE = 6.19 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 406 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1D0B RELATED DB: PDB REMARK 900 LRR DOMAIN OF INLB REMARK 900 RELATED ID: 1H6T RELATED DB: PDB REMARK 900 INTERNALIN DOMAIN OF INLB REMARK 900 RELATED ID: 1M9S RELATED DB: PDB REMARK 900 FULL-LENGTH WILDTYPE INLB LACKING DENSITY FOR THE B-REPEAT REMARK 900 RELATED ID: 2Y5P RELATED DB: PDB REMARK 900 B-REPEAT OF WILDTYPE INLB REMARK 900 RELATED ID: 2Y5Q RELATED DB: PDB REMARK 900 WILTYPE OF THE SAME PROTEIN (INLB392) LACKING DENSITY FOR THE B- REMARK 900 REPEAT REMARK 900 RELATED ID: 7PV8 RELATED DB: PDB REMARK 900 DIFFERENT CRYSTAL FORM OF THE SAME PROTEIN REMARK 900 RELATED ID: 7PV9 RELATED DB: PDB REMARK 900 WILDTYPE OF INLB392 DBREF 7NMS A 36 392 UNP P0DQD2 INLB_LISMO 36 392 SEQADV 7NMS GLY A 31 UNP P0DQD2 EXPRESSION TAG SEQADV 7NMS PRO A 32 UNP P0DQD2 EXPRESSION TAG SEQADV 7NMS LEU A 33 UNP P0DQD2 EXPRESSION TAG SEQADV 7NMS GLY A 34 UNP P0DQD2 EXPRESSION TAG SEQADV 7NMS SER A 35 UNP P0DQD2 EXPRESSION TAG SEQADV 7NMS GLU A 332 UNP P0DQD2 THR 332 ENGINEERED MUTATION SEQRES 1 A 362 GLY PRO LEU GLY SER GLU THR ILE THR VAL PRO THR PRO SEQRES 2 A 362 ILE LYS GLN ILE PHE SER ASP ASP ALA PHE ALA GLU THR SEQRES 3 A 362 ILE LYS ASP ASN LEU LYS LYS LYS SER VAL THR ASP ALA SEQRES 4 A 362 VAL THR GLN ASN GLU LEU ASN SER ILE ASP GLN ILE ILE SEQRES 5 A 362 ALA ASN ASN SER ASP ILE LYS SER VAL GLN GLY ILE GLN SEQRES 6 A 362 TYR LEU PRO ASN VAL THR LYS LEU PHE LEU ASN GLY ASN SEQRES 7 A 362 LYS LEU THR ASP ILE LYS PRO LEU ALA ASN LEU LYS ASN SEQRES 8 A 362 LEU GLY TRP LEU PHE LEU ASP GLU ASN LYS VAL LYS ASP SEQRES 9 A 362 LEU SER SER LEU LYS ASP LEU LYS LYS LEU LYS SER LEU SEQRES 10 A 362 SER LEU GLU HIS ASN GLY ILE SER ASP ILE ASN GLY LEU SEQRES 11 A 362 VAL HIS LEU PRO GLN LEU GLU SER LEU TYR LEU GLY ASN SEQRES 12 A 362 ASN LYS ILE THR ASP ILE THR VAL LEU SER ARG LEU THR SEQRES 13 A 362 LYS LEU ASP THR LEU SER LEU GLU ASP ASN GLN ILE SER SEQRES 14 A 362 ASP ILE VAL PRO LEU ALA GLY LEU THR LYS LEU GLN ASN SEQRES 15 A 362 LEU TYR LEU SER LYS ASN HIS ILE SER ASP LEU ARG ALA SEQRES 16 A 362 LEU ALA GLY LEU LYS ASN LEU ASP VAL LEU GLU LEU PHE SEQRES 17 A 362 SER GLN GLU CYS LEU ASN LYS PRO ILE ASN HIS GLN SER SEQRES 18 A 362 ASN LEU VAL VAL PRO ASN THR VAL LYS ASN THR ASP GLY SEQRES 19 A 362 SER LEU VAL THR PRO GLU ILE ILE SER ASP ASP GLY ASP SEQRES 20 A 362 TYR GLU LYS PRO ASN VAL LYS TRP HIS LEU PRO GLU PHE SEQRES 21 A 362 THR ASN GLU VAL SER PHE ILE PHE TYR GLN PRO VAL THR SEQRES 22 A 362 ILE GLY LYS ALA LYS ALA ARG PHE HIS GLY ARG VAL THR SEQRES 23 A 362 GLN PRO LEU LYS GLU VAL TYR THR VAL SER TYR ASP VAL SEQRES 24 A 362 ASP GLY GLU VAL ILE LYS THR LYS VAL GLU ALA GLY THR SEQRES 25 A 362 ARG ILE THR ALA PRO LYS PRO PRO THR LYS GLN GLY TYR SEQRES 26 A 362 VAL PHE LYS GLY TRP TYR THR GLU LYS ASN GLY GLY HIS SEQRES 27 A 362 GLU TRP ASN PHE ASN THR ASP TYR MET SER GLY ASN ASP SEQRES 28 A 362 PHE THR LEU TYR ALA VAL PHE LYS ALA GLU THR HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HET GOL A 404 13 HET GOL A 405 14 HET PEG A 406 17 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 3(O4 S 2-) FORMUL 5 GOL 2(C3 H8 O3) FORMUL 7 PEG C4 H10 O3 FORMUL 8 HOH *329(H2 O) HELIX 1 AA1 ILE A 44 PHE A 48 1 5 HELIX 2 AA2 ASP A 50 LEU A 61 1 12 HELIX 3 AA3 THR A 71 SER A 77 1 7 HELIX 4 AA4 GLY A 93 LEU A 97 5 5 HELIX 5 AA5 ILE A 113 ALA A 117 5 5 HELIX 6 AA6 ASP A 134 LYS A 139 5 6 HELIX 7 AA7 ILE A 157 LEU A 163 5 7 HELIX 8 AA8 ILE A 179 LEU A 185 5 7 HELIX 9 AA9 ILE A 201 ALA A 205 5 5 HELIX 10 AB1 LEU A 223 ALA A 227 5 5 SHEET 1 AA1 2 THR A 42 PRO A 43 0 SHEET 2 AA1 2 ALA A 69 VAL A 70 -1 O VAL A 70 N THR A 42 SHEET 1 AA2 8 GLN A 80 ILE A 82 0 SHEET 2 AA2 8 LYS A 102 PHE A 104 1 O PHE A 104 N ILE A 81 SHEET 3 AA2 8 TRP A 124 PHE A 126 1 O PHE A 126 N LEU A 103 SHEET 4 AA2 8 SER A 146 SER A 148 1 O SER A 146 N LEU A 125 SHEET 5 AA2 8 SER A 168 TYR A 170 1 O TYR A 170 N LEU A 147 SHEET 6 AA2 8 THR A 190 SER A 192 1 O SER A 192 N LEU A 169 SHEET 7 AA2 8 ASN A 212 TYR A 214 1 O ASN A 212 N LEU A 191 SHEET 8 AA2 8 VAL A 234 GLU A 236 1 O VAL A 234 N LEU A 213 SHEET 1 AA3 3 GLN A 240 LEU A 243 0 SHEET 2 AA3 3 ALA A 307 LYS A 320 1 O THR A 316 N CYS A 242 SHEET 3 AA3 3 ILE A 247 ASN A 248 1 N ILE A 247 O LYS A 320 SHEET 1 AA4 4 GLN A 240 LEU A 243 0 SHEET 2 AA4 4 ALA A 307 LYS A 320 1 O THR A 316 N CYS A 242 SHEET 3 AA4 4 GLU A 293 ILE A 304 -1 N VAL A 294 O GLN A 317 SHEET 4 AA4 4 ILE A 271 ILE A 272 -1 N ILE A 271 O ILE A 297 SHEET 1 AA5 3 ASN A 252 PRO A 256 0 SHEET 2 AA5 3 ASN A 282 HIS A 286 -1 O VAL A 283 N VAL A 255 SHEET 3 AA5 3 ASP A 277 GLU A 279 -1 N ASP A 277 O LYS A 284 SHEET 1 AA6 5 GLU A 332 GLU A 339 0 SHEET 2 AA6 5 VAL A 322 VAL A 329 -1 N TYR A 327 O ILE A 334 SHEET 3 AA6 5 PHE A 382 ALA A 390 1 O ALA A 386 N ASP A 328 SHEET 4 AA6 5 TYR A 355 GLU A 363 -1 N TYR A 361 O TYR A 385 SHEET 5 AA6 5 GLY A 366 GLU A 369 -1 O HIS A 368 N THR A 362 CISPEP 1 LYS A 280 PRO A 281 0 6.45 SITE 1 AC1 2 LYS A 142 HIS A 162 SITE 1 AC2 2 ARG A 224 LYS A 260 SITE 1 AC3 5 SER A 265 LEU A 266 LYS A 280 HIS A 368 SITE 2 AC3 5 HOH A 522 SITE 1 AC4 4 ASN A 248 LYS A 320 LYS A 337 HOH A 681 SITE 1 AC5 7 LEU A 235 GLU A 236 LEU A 237 PHE A 238 SITE 2 AC5 7 LYS A 308 ALA A 309 ARG A 310 SITE 1 AC6 4 LYS A 102 PHE A 104 TRP A 124 ALA A 227 CRYST1 43.410 88.730 102.020 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023036 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011270 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009802 0.00000