data_7NO2 # _entry.id 7NO2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.342 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7NO2 ? ? WWPDB D_1292114056 ? ? EMDB EMD-12487 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Structure of the mature RSV CA lattice: hexamer derived from tubes (C2-symmetric)' _pdbx_database_related.db_id EMD-12487 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7NO2 _pdbx_database_status.recvd_initial_deposition_date 2021-02-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Obr, M.' 1 0000-0003-1756-6564 'Ricana, C.L.' 2 ? 'Nikulin, N.' 3 ? 'Feathers, J.-P.R.' 4 ? 'Klanschnig, M.' 5 ? 'Thader, A.' 6 ? 'Johnson, M.C.' 7 ? 'Vogt, V.M.' 8 ? 'Schur, F.K.M.' 9 0000-0003-4790-8078 'Dick, R.A.' 10 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 3226 _citation.page_last 3226 _citation.title 'Structure of the mature Rous sarcoma virus lattice reveals a role for IP6 in the formation of the capsid hexamer.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-021-23506-0 _citation.pdbx_database_id_PubMed 34050170 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Obr, M.' 1 ? primary 'Ricana, C.L.' 2 0000-0002-9733-9136 primary 'Nikulin, N.' 3 ? primary 'Feathers, J.R.' 4 ? primary 'Klanschnig, M.' 5 ? primary 'Thader, A.' 6 ? primary 'Johnson, M.C.' 7 ? primary 'Vogt, V.M.' 8 ? primary 'Schur, F.K.M.' 9 0000-0003-4790-8078 primary 'Dick, R.A.' 10 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Capsid protein p27, alternate cleaved 1' _entity.formula_weight 24773.594 _entity.pdbx_number_of_molecules 3 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTV IAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLAEPAGPWADIMQGP SESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLTTPGEIIKYVLDRQKTA ; _entity_poly.pdbx_seq_one_letter_code_can ;PVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTV IAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLAEPAGPWADIMQGP SESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLTTPGEIIKYVLDRQKTA ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 VAL n 1 3 VAL n 1 4 ILE n 1 5 LYS n 1 6 THR n 1 7 GLU n 1 8 GLY n 1 9 PRO n 1 10 ALA n 1 11 TRP n 1 12 THR n 1 13 PRO n 1 14 LEU n 1 15 GLU n 1 16 PRO n 1 17 LYS n 1 18 LEU n 1 19 ILE n 1 20 THR n 1 21 ARG n 1 22 LEU n 1 23 ALA n 1 24 ASP n 1 25 THR n 1 26 VAL n 1 27 ARG n 1 28 THR n 1 29 LYS n 1 30 GLY n 1 31 LEU n 1 32 ARG n 1 33 SER n 1 34 PRO n 1 35 ILE n 1 36 THR n 1 37 MET n 1 38 ALA n 1 39 GLU n 1 40 VAL n 1 41 GLU n 1 42 ALA n 1 43 LEU n 1 44 MET n 1 45 SER n 1 46 SER n 1 47 PRO n 1 48 LEU n 1 49 LEU n 1 50 PRO n 1 51 HIS n 1 52 ASP n 1 53 VAL n 1 54 THR n 1 55 ASN n 1 56 LEU n 1 57 MET n 1 58 ARG n 1 59 VAL n 1 60 ILE n 1 61 LEU n 1 62 GLY n 1 63 PRO n 1 64 ALA n 1 65 PRO n 1 66 TYR n 1 67 ALA n 1 68 LEU n 1 69 TRP n 1 70 MET n 1 71 ASP n 1 72 ALA n 1 73 TRP n 1 74 GLY n 1 75 VAL n 1 76 GLN n 1 77 LEU n 1 78 GLN n 1 79 THR n 1 80 VAL n 1 81 ILE n 1 82 ALA n 1 83 ALA n 1 84 ALA n 1 85 THR n 1 86 ARG n 1 87 ASP n 1 88 PRO n 1 89 ARG n 1 90 HIS n 1 91 PRO n 1 92 ALA n 1 93 ASN n 1 94 GLY n 1 95 GLN n 1 96 GLY n 1 97 ARG n 1 98 GLY n 1 99 GLU n 1 100 ARG n 1 101 THR n 1 102 ASN n 1 103 LEU n 1 104 ASN n 1 105 ARG n 1 106 LEU n 1 107 LYS n 1 108 GLY n 1 109 LEU n 1 110 ALA n 1 111 ASP n 1 112 GLY n 1 113 MET n 1 114 VAL n 1 115 GLY n 1 116 ASN n 1 117 PRO n 1 118 GLN n 1 119 GLY n 1 120 GLN n 1 121 ALA n 1 122 ALA n 1 123 LEU n 1 124 LEU n 1 125 ARG n 1 126 PRO n 1 127 GLY n 1 128 GLU n 1 129 LEU n 1 130 VAL n 1 131 ALA n 1 132 ILE n 1 133 THR n 1 134 ALA n 1 135 SER n 1 136 ALA n 1 137 LEU n 1 138 GLN n 1 139 ALA n 1 140 PHE n 1 141 ARG n 1 142 GLU n 1 143 VAL n 1 144 ALA n 1 145 ARG n 1 146 LEU n 1 147 ALA n 1 148 GLU n 1 149 PRO n 1 150 ALA n 1 151 GLY n 1 152 PRO n 1 153 TRP n 1 154 ALA n 1 155 ASP n 1 156 ILE n 1 157 MET n 1 158 GLN n 1 159 GLY n 1 160 PRO n 1 161 SER n 1 162 GLU n 1 163 SER n 1 164 PHE n 1 165 VAL n 1 166 ASP n 1 167 PHE n 1 168 ALA n 1 169 ASN n 1 170 ARG n 1 171 LEU n 1 172 ILE n 1 173 LYS n 1 174 ALA n 1 175 VAL n 1 176 GLU n 1 177 GLY n 1 178 SER n 1 179 ASP n 1 180 LEU n 1 181 PRO n 1 182 PRO n 1 183 SER n 1 184 ALA n 1 185 ARG n 1 186 ALA n 1 187 PRO n 1 188 VAL n 1 189 ILE n 1 190 ILE n 1 191 ASP n 1 192 CYS n 1 193 PHE n 1 194 ARG n 1 195 GLN n 1 196 LYS n 1 197 SER n 1 198 GLN n 1 199 PRO n 1 200 ASP n 1 201 ILE n 1 202 GLN n 1 203 GLN n 1 204 LEU n 1 205 ILE n 1 206 ARG n 1 207 THR n 1 208 ALA n 1 209 PRO n 1 210 SER n 1 211 THR n 1 212 LEU n 1 213 THR n 1 214 THR n 1 215 PRO n 1 216 GLY n 1 217 GLU n 1 218 ILE n 1 219 ILE n 1 220 LYS n 1 221 TYR n 1 222 VAL n 1 223 LEU n 1 224 ASP n 1 225 ARG n 1 226 GLN n 1 227 LYS n 1 228 THR n 1 229 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 229 _entity_src_gen.gene_src_common_name RSV-PrC _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gag _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Prague C' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rous sarcoma virus (strain Prague C)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11888 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GAG_RSVP _struct_ref.pdbx_db_accession P03322 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTV IAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLAEPAGPWADIMQGP SESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLTTPGEIIKYVLDRQKTA ; _struct_ref.pdbx_align_begin 240 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7NO2 A 1 ? 229 ? P03322 240 ? 468 ? 1 229 2 1 7NO2 B 1 ? 229 ? P03322 240 ? 468 ? 1 229 3 1 7NO2 C 1 ? 229 ? P03322 240 ? 468 ? 1 229 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7NO2 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 7NO2 _struct.title 'Structure of the mature RSV CA lattice: hexamer derived from tubes (C2-symmetric)' _struct.pdbx_descriptor 'Capsid protein p27, alternate cleaved 1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7NO2 _struct_keywords.text 'Retrovirus, Rous sarcoma virus, capsid protein, IP6, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 15 ? LYS A 29 ? GLU A 15 LYS A 29 1 ? 15 HELX_P HELX_P2 AA2 SER A 33 ? MET A 44 ? SER A 33 MET A 44 1 ? 12 HELX_P HELX_P3 AA3 LEU A 49 ? LEU A 61 ? LEU A 49 LEU A 61 1 ? 13 HELX_P HELX_P4 AA4 PRO A 63 ? ASP A 87 ? PRO A 63 ASP A 87 1 ? 25 HELX_P HELX_P5 AA5 ASN A 102 ? GLY A 108 ? ASN A 102 GLY A 108 1 ? 7 HELX_P HELX_P6 AA6 ASN A 116 ? LEU A 123 ? ASN A 116 LEU A 123 1 ? 8 HELX_P HELX_P7 AA7 ARG A 125 ? GLU A 148 ? ARG A 125 GLU A 148 1 ? 24 HELX_P HELX_P8 AA8 PRO A 152 ? ILE A 156 ? PRO A 152 ILE A 156 5 ? 5 HELX_P HELX_P9 AA9 SER A 163 ? GLY A 177 ? SER A 163 GLY A 177 1 ? 15 HELX_P HELX_P10 AB1 ARG A 185 ? SER A 197 ? ARG A 185 SER A 197 1 ? 13 HELX_P HELX_P11 AB2 GLN A 198 ? ARG A 206 ? GLN A 198 ARG A 206 1 ? 9 HELX_P HELX_P12 AB3 THR A 214 ? ARG A 225 ? THR A 214 ARG A 225 1 ? 12 HELX_P HELX_P13 AB4 GLU B 15 ? GLY B 30 ? GLU B 15 GLY B 30 1 ? 16 HELX_P HELX_P14 AB5 SER B 33 ? MET B 44 ? SER B 33 MET B 44 1 ? 12 HELX_P HELX_P15 AB6 LEU B 49 ? LEU B 61 ? LEU B 49 LEU B 61 1 ? 13 HELX_P HELX_P16 AB7 GLY B 62 ? ARG B 86 ? GLY B 62 ARG B 86 1 ? 25 HELX_P HELX_P17 AB8 GLY B 96 ? ARG B 100 ? GLY B 96 ARG B 100 5 ? 5 HELX_P HELX_P18 AB9 ASN B 102 ? GLY B 108 ? ASN B 102 GLY B 108 1 ? 7 HELX_P HELX_P19 AC1 ASN B 116 ? LEU B 123 ? ASN B 116 LEU B 123 1 ? 8 HELX_P HELX_P20 AC2 ARG B 125 ? GLU B 148 ? ARG B 125 GLU B 148 1 ? 24 HELX_P HELX_P21 AC3 SER B 163 ? GLY B 177 ? SER B 163 GLY B 177 1 ? 15 HELX_P HELX_P22 AC4 PRO B 182 ? ARG B 185 ? PRO B 182 ARG B 185 5 ? 4 HELX_P HELX_P23 AC5 ALA B 186 ? SER B 197 ? ALA B 186 SER B 197 1 ? 12 HELX_P HELX_P24 AC6 GLN B 198 ? THR B 207 ? GLN B 198 THR B 207 1 ? 10 HELX_P HELX_P25 AC7 THR B 214 ? ARG B 225 ? THR B 214 ARG B 225 1 ? 12 HELX_P HELX_P26 AC8 GLU C 15 ? LYS C 29 ? GLU C 15 LYS C 29 1 ? 15 HELX_P HELX_P27 AC9 SER C 33 ? MET C 44 ? SER C 33 MET C 44 1 ? 12 HELX_P HELX_P28 AD1 LEU C 49 ? LEU C 61 ? LEU C 49 LEU C 61 1 ? 13 HELX_P HELX_P29 AD2 GLY C 62 ? ASP C 87 ? GLY C 62 ASP C 87 1 ? 26 HELX_P HELX_P30 AD3 ASN C 102 ? LEU C 106 ? ASN C 102 LEU C 106 5 ? 5 HELX_P HELX_P31 AD4 ASN C 116 ? LEU C 123 ? ASN C 116 LEU C 123 1 ? 8 HELX_P HELX_P32 AD5 ARG C 125 ? GLU C 148 ? ARG C 125 GLU C 148 1 ? 24 HELX_P HELX_P33 AD6 SER C 163 ? GLY C 177 ? SER C 163 GLY C 177 1 ? 15 HELX_P HELX_P34 AD7 PRO C 181 ? ALA C 184 ? PRO C 181 ALA C 184 5 ? 4 HELX_P HELX_P35 AD8 ARG C 185 ? SER C 197 ? ARG C 185 SER C 197 1 ? 13 HELX_P HELX_P36 AD9 GLN C 198 ? ARG C 206 ? GLN C 198 ARG C 206 1 ? 9 HELX_P HELX_P37 AE1 THR C 214 ? ARG C 225 ? THR C 214 ARG C 225 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 7NO2 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 ? ? ? A . n A 1 2 VAL 2 2 ? ? ? A . n A 1 3 VAL 3 3 ? ? ? A . n A 1 4 ILE 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 THR 6 6 ? ? ? A . n A 1 7 GLU 7 7 ? ? ? A . n A 1 8 GLY 8 8 ? ? ? A . n A 1 9 PRO 9 9 ? ? ? A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 TRP 11 11 11 TRP TRP A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 MET 37 37 37 MET MET A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 MET 57 57 57 MET MET A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 TRP 69 69 69 TRP TRP A . n A 1 70 MET 70 70 70 MET MET A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 TRP 73 73 73 TRP TRP A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 GLN 76 76 76 GLN GLN A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 HIS 90 90 90 HIS HIS A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 GLN 95 95 95 GLN GLN A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 ARG 100 100 100 ARG ARG A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ASN 102 102 102 ASN ASN A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 ASN 104 104 104 ASN ASN A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 MET 113 113 113 MET MET A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 GLY 119 119 119 GLY GLY A . n A 1 120 GLN 120 120 120 GLN GLN A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 PRO 126 126 126 PRO PRO A . n A 1 127 GLY 127 127 127 GLY GLY A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 SER 135 135 135 SER SER A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 GLN 138 138 138 GLN GLN A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 PHE 140 140 140 PHE PHE A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 GLU 142 142 142 GLU GLU A . n A 1 143 VAL 143 143 143 VAL VAL A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 ARG 145 145 145 ARG ARG A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 ALA 147 147 147 ALA ALA A . n A 1 148 GLU 148 148 148 GLU GLU A . n A 1 149 PRO 149 149 149 PRO PRO A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 GLY 151 151 151 GLY GLY A . n A 1 152 PRO 152 152 152 PRO PRO A . n A 1 153 TRP 153 153 153 TRP TRP A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 ASP 155 155 155 ASP ASP A . n A 1 156 ILE 156 156 156 ILE ILE A . n A 1 157 MET 157 157 157 MET MET A . n A 1 158 GLN 158 158 158 GLN GLN A . n A 1 159 GLY 159 159 159 GLY GLY A . n A 1 160 PRO 160 160 160 PRO PRO A . n A 1 161 SER 161 161 161 SER SER A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 SER 163 163 163 SER SER A . n A 1 164 PHE 164 164 164 PHE PHE A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 PHE 167 167 167 PHE PHE A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 ASN 169 169 169 ASN ASN A . n A 1 170 ARG 170 170 170 ARG ARG A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 ILE 172 172 172 ILE ILE A . n A 1 173 LYS 173 173 173 LYS LYS A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 GLU 176 176 176 GLU GLU A . n A 1 177 GLY 177 177 177 GLY GLY A . n A 1 178 SER 178 178 178 SER SER A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 LEU 180 180 180 LEU LEU A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 PRO 182 182 182 PRO PRO A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 ARG 185 185 185 ARG ARG A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 PRO 187 187 187 PRO PRO A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 ASP 191 191 191 ASP ASP A . n A 1 192 CYS 192 192 192 CYS CYS A . n A 1 193 PHE 193 193 193 PHE PHE A . n A 1 194 ARG 194 194 194 ARG ARG A . n A 1 195 GLN 195 195 195 GLN GLN A . n A 1 196 LYS 196 196 196 LYS LYS A . n A 1 197 SER 197 197 197 SER SER A . n A 1 198 GLN 198 198 198 GLN GLN A . n A 1 199 PRO 199 199 199 PRO PRO A . n A 1 200 ASP 200 200 200 ASP ASP A . n A 1 201 ILE 201 201 201 ILE ILE A . n A 1 202 GLN 202 202 202 GLN GLN A . n A 1 203 GLN 203 203 203 GLN GLN A . n A 1 204 LEU 204 204 204 LEU LEU A . n A 1 205 ILE 205 205 205 ILE ILE A . n A 1 206 ARG 206 206 206 ARG ARG A . n A 1 207 THR 207 207 207 THR THR A . n A 1 208 ALA 208 208 208 ALA ALA A . n A 1 209 PRO 209 209 209 PRO PRO A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 THR 211 211 211 THR THR A . n A 1 212 LEU 212 212 212 LEU LEU A . n A 1 213 THR 213 213 213 THR THR A . n A 1 214 THR 214 214 214 THR THR A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 GLY 216 216 216 GLY GLY A . n A 1 217 GLU 217 217 217 GLU GLU A . n A 1 218 ILE 218 218 218 ILE ILE A . n A 1 219 ILE 219 219 219 ILE ILE A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 TYR 221 221 221 TYR TYR A . n A 1 222 VAL 222 222 222 VAL VAL A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 ASP 224 224 224 ASP ASP A . n A 1 225 ARG 225 225 225 ARG ARG A . n A 1 226 GLN 226 226 226 GLN GLN A . n A 1 227 LYS 227 227 227 LYS LYS A . n A 1 228 THR 228 228 228 THR THR A . n A 1 229 ALA 229 229 229 ALA ALA A . n B 1 1 PRO 1 1 ? ? ? B . n B 1 2 VAL 2 2 ? ? ? B . n B 1 3 VAL 3 3 ? ? ? B . n B 1 4 ILE 4 4 ? ? ? B . n B 1 5 LYS 5 5 ? ? ? B . n B 1 6 THR 6 6 ? ? ? B . n B 1 7 GLU 7 7 ? ? ? B . n B 1 8 GLY 8 8 ? ? ? B . n B 1 9 PRO 9 9 ? ? ? B . n B 1 10 ALA 10 10 10 ALA ALA B . n B 1 11 TRP 11 11 11 TRP TRP B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 PRO 13 13 13 PRO PRO B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 GLU 15 15 15 GLU GLU B . n B 1 16 PRO 16 16 16 PRO PRO B . n B 1 17 LYS 17 17 17 LYS LYS B . n B 1 18 LEU 18 18 18 LEU LEU B . n B 1 19 ILE 19 19 19 ILE ILE B . n B 1 20 THR 20 20 20 THR THR B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 LEU 22 22 22 LEU LEU B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ASP 24 24 24 ASP ASP B . n B 1 25 THR 25 25 25 THR THR B . n B 1 26 VAL 26 26 26 VAL VAL B . n B 1 27 ARG 27 27 27 ARG ARG B . n B 1 28 THR 28 28 28 THR THR B . n B 1 29 LYS 29 29 29 LYS LYS B . n B 1 30 GLY 30 30 30 GLY GLY B . n B 1 31 LEU 31 31 31 LEU LEU B . n B 1 32 ARG 32 32 32 ARG ARG B . n B 1 33 SER 33 33 33 SER SER B . n B 1 34 PRO 34 34 34 PRO PRO B . n B 1 35 ILE 35 35 35 ILE ILE B . n B 1 36 THR 36 36 36 THR THR B . n B 1 37 MET 37 37 37 MET MET B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 GLU 39 39 39 GLU GLU B . n B 1 40 VAL 40 40 40 VAL VAL B . n B 1 41 GLU 41 41 41 GLU GLU B . n B 1 42 ALA 42 42 42 ALA ALA B . n B 1 43 LEU 43 43 43 LEU LEU B . n B 1 44 MET 44 44 44 MET MET B . n B 1 45 SER 45 45 45 SER SER B . n B 1 46 SER 46 46 46 SER SER B . n B 1 47 PRO 47 47 47 PRO PRO B . n B 1 48 LEU 48 48 48 LEU LEU B . n B 1 49 LEU 49 49 49 LEU LEU B . n B 1 50 PRO 50 50 50 PRO PRO B . n B 1 51 HIS 51 51 51 HIS HIS B . n B 1 52 ASP 52 52 52 ASP ASP B . n B 1 53 VAL 53 53 53 VAL VAL B . n B 1 54 THR 54 54 54 THR THR B . n B 1 55 ASN 55 55 55 ASN ASN B . n B 1 56 LEU 56 56 56 LEU LEU B . n B 1 57 MET 57 57 57 MET MET B . n B 1 58 ARG 58 58 58 ARG ARG B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 ILE 60 60 60 ILE ILE B . n B 1 61 LEU 61 61 61 LEU LEU B . n B 1 62 GLY 62 62 62 GLY GLY B . n B 1 63 PRO 63 63 63 PRO PRO B . n B 1 64 ALA 64 64 64 ALA ALA B . n B 1 65 PRO 65 65 65 PRO PRO B . n B 1 66 TYR 66 66 66 TYR TYR B . n B 1 67 ALA 67 67 67 ALA ALA B . n B 1 68 LEU 68 68 68 LEU LEU B . n B 1 69 TRP 69 69 69 TRP TRP B . n B 1 70 MET 70 70 70 MET MET B . n B 1 71 ASP 71 71 71 ASP ASP B . n B 1 72 ALA 72 72 72 ALA ALA B . n B 1 73 TRP 73 73 73 TRP TRP B . n B 1 74 GLY 74 74 74 GLY GLY B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 GLN 76 76 76 GLN GLN B . n B 1 77 LEU 77 77 77 LEU LEU B . n B 1 78 GLN 78 78 78 GLN GLN B . n B 1 79 THR 79 79 79 THR THR B . n B 1 80 VAL 80 80 80 VAL VAL B . n B 1 81 ILE 81 81 81 ILE ILE B . n B 1 82 ALA 82 82 82 ALA ALA B . n B 1 83 ALA 83 83 83 ALA ALA B . n B 1 84 ALA 84 84 84 ALA ALA B . n B 1 85 THR 85 85 85 THR THR B . n B 1 86 ARG 86 86 86 ARG ARG B . n B 1 87 ASP 87 87 87 ASP ASP B . n B 1 88 PRO 88 88 88 PRO PRO B . n B 1 89 ARG 89 89 89 ARG ARG B . n B 1 90 HIS 90 90 90 HIS HIS B . n B 1 91 PRO 91 91 91 PRO PRO B . n B 1 92 ALA 92 92 92 ALA ALA B . n B 1 93 ASN 93 93 93 ASN ASN B . n B 1 94 GLY 94 94 94 GLY GLY B . n B 1 95 GLN 95 95 95 GLN GLN B . n B 1 96 GLY 96 96 96 GLY GLY B . n B 1 97 ARG 97 97 97 ARG ARG B . n B 1 98 GLY 98 98 98 GLY GLY B . n B 1 99 GLU 99 99 99 GLU GLU B . n B 1 100 ARG 100 100 100 ARG ARG B . n B 1 101 THR 101 101 101 THR THR B . n B 1 102 ASN 102 102 102 ASN ASN B . n B 1 103 LEU 103 103 103 LEU LEU B . n B 1 104 ASN 104 104 104 ASN ASN B . n B 1 105 ARG 105 105 105 ARG ARG B . n B 1 106 LEU 106 106 106 LEU LEU B . n B 1 107 LYS 107 107 107 LYS LYS B . n B 1 108 GLY 108 108 108 GLY GLY B . n B 1 109 LEU 109 109 109 LEU LEU B . n B 1 110 ALA 110 110 110 ALA ALA B . n B 1 111 ASP 111 111 111 ASP ASP B . n B 1 112 GLY 112 112 112 GLY GLY B . n B 1 113 MET 113 113 113 MET MET B . n B 1 114 VAL 114 114 114 VAL VAL B . n B 1 115 GLY 115 115 115 GLY GLY B . n B 1 116 ASN 116 116 116 ASN ASN B . n B 1 117 PRO 117 117 117 PRO PRO B . n B 1 118 GLN 118 118 118 GLN GLN B . n B 1 119 GLY 119 119 119 GLY GLY B . n B 1 120 GLN 120 120 120 GLN GLN B . n B 1 121 ALA 121 121 121 ALA ALA B . n B 1 122 ALA 122 122 122 ALA ALA B . n B 1 123 LEU 123 123 123 LEU LEU B . n B 1 124 LEU 124 124 124 LEU LEU B . n B 1 125 ARG 125 125 125 ARG ARG B . n B 1 126 PRO 126 126 126 PRO PRO B . n B 1 127 GLY 127 127 127 GLY GLY B . n B 1 128 GLU 128 128 128 GLU GLU B . n B 1 129 LEU 129 129 129 LEU LEU B . n B 1 130 VAL 130 130 130 VAL VAL B . n B 1 131 ALA 131 131 131 ALA ALA B . n B 1 132 ILE 132 132 132 ILE ILE B . n B 1 133 THR 133 133 133 THR THR B . n B 1 134 ALA 134 134 134 ALA ALA B . n B 1 135 SER 135 135 135 SER SER B . n B 1 136 ALA 136 136 136 ALA ALA B . n B 1 137 LEU 137 137 137 LEU LEU B . n B 1 138 GLN 138 138 138 GLN GLN B . n B 1 139 ALA 139 139 139 ALA ALA B . n B 1 140 PHE 140 140 140 PHE PHE B . n B 1 141 ARG 141 141 141 ARG ARG B . n B 1 142 GLU 142 142 142 GLU GLU B . n B 1 143 VAL 143 143 143 VAL VAL B . n B 1 144 ALA 144 144 144 ALA ALA B . n B 1 145 ARG 145 145 145 ARG ARG B . n B 1 146 LEU 146 146 146 LEU LEU B . n B 1 147 ALA 147 147 147 ALA ALA B . n B 1 148 GLU 148 148 148 GLU GLU B . n B 1 149 PRO 149 149 149 PRO PRO B . n B 1 150 ALA 150 150 150 ALA ALA B . n B 1 151 GLY 151 151 151 GLY GLY B . n B 1 152 PRO 152 152 152 PRO PRO B . n B 1 153 TRP 153 153 153 TRP TRP B . n B 1 154 ALA 154 154 154 ALA ALA B . n B 1 155 ASP 155 155 155 ASP ASP B . n B 1 156 ILE 156 156 156 ILE ILE B . n B 1 157 MET 157 157 157 MET MET B . n B 1 158 GLN 158 158 158 GLN GLN B . n B 1 159 GLY 159 159 159 GLY GLY B . n B 1 160 PRO 160 160 160 PRO PRO B . n B 1 161 SER 161 161 161 SER SER B . n B 1 162 GLU 162 162 162 GLU GLU B . n B 1 163 SER 163 163 163 SER SER B . n B 1 164 PHE 164 164 164 PHE PHE B . n B 1 165 VAL 165 165 165 VAL VAL B . n B 1 166 ASP 166 166 166 ASP ASP B . n B 1 167 PHE 167 167 167 PHE PHE B . n B 1 168 ALA 168 168 168 ALA ALA B . n B 1 169 ASN 169 169 169 ASN ASN B . n B 1 170 ARG 170 170 170 ARG ARG B . n B 1 171 LEU 171 171 171 LEU LEU B . n B 1 172 ILE 172 172 172 ILE ILE B . n B 1 173 LYS 173 173 173 LYS LYS B . n B 1 174 ALA 174 174 174 ALA ALA B . n B 1 175 VAL 175 175 175 VAL VAL B . n B 1 176 GLU 176 176 176 GLU GLU B . n B 1 177 GLY 177 177 177 GLY GLY B . n B 1 178 SER 178 178 178 SER SER B . n B 1 179 ASP 179 179 179 ASP ASP B . n B 1 180 LEU 180 180 180 LEU LEU B . n B 1 181 PRO 181 181 181 PRO PRO B . n B 1 182 PRO 182 182 182 PRO PRO B . n B 1 183 SER 183 183 183 SER SER B . n B 1 184 ALA 184 184 184 ALA ALA B . n B 1 185 ARG 185 185 185 ARG ARG B . n B 1 186 ALA 186 186 186 ALA ALA B . n B 1 187 PRO 187 187 187 PRO PRO B . n B 1 188 VAL 188 188 188 VAL VAL B . n B 1 189 ILE 189 189 189 ILE ILE B . n B 1 190 ILE 190 190 190 ILE ILE B . n B 1 191 ASP 191 191 191 ASP ASP B . n B 1 192 CYS 192 192 192 CYS CYS B . n B 1 193 PHE 193 193 193 PHE PHE B . n B 1 194 ARG 194 194 194 ARG ARG B . n B 1 195 GLN 195 195 195 GLN GLN B . n B 1 196 LYS 196 196 196 LYS LYS B . n B 1 197 SER 197 197 197 SER SER B . n B 1 198 GLN 198 198 198 GLN GLN B . n B 1 199 PRO 199 199 199 PRO PRO B . n B 1 200 ASP 200 200 200 ASP ASP B . n B 1 201 ILE 201 201 201 ILE ILE B . n B 1 202 GLN 202 202 202 GLN GLN B . n B 1 203 GLN 203 203 203 GLN GLN B . n B 1 204 LEU 204 204 204 LEU LEU B . n B 1 205 ILE 205 205 205 ILE ILE B . n B 1 206 ARG 206 206 206 ARG ARG B . n B 1 207 THR 207 207 207 THR THR B . n B 1 208 ALA 208 208 208 ALA ALA B . n B 1 209 PRO 209 209 209 PRO PRO B . n B 1 210 SER 210 210 210 SER SER B . n B 1 211 THR 211 211 211 THR THR B . n B 1 212 LEU 212 212 212 LEU LEU B . n B 1 213 THR 213 213 213 THR THR B . n B 1 214 THR 214 214 214 THR THR B . n B 1 215 PRO 215 215 215 PRO PRO B . n B 1 216 GLY 216 216 216 GLY GLY B . n B 1 217 GLU 217 217 217 GLU GLU B . n B 1 218 ILE 218 218 218 ILE ILE B . n B 1 219 ILE 219 219 219 ILE ILE B . n B 1 220 LYS 220 220 220 LYS LYS B . n B 1 221 TYR 221 221 221 TYR TYR B . n B 1 222 VAL 222 222 222 VAL VAL B . n B 1 223 LEU 223 223 223 LEU LEU B . n B 1 224 ASP 224 224 224 ASP ASP B . n B 1 225 ARG 225 225 225 ARG ARG B . n B 1 226 GLN 226 226 226 GLN GLN B . n B 1 227 LYS 227 227 227 LYS LYS B . n B 1 228 THR 228 228 228 THR THR B . n B 1 229 ALA 229 229 229 ALA ALA B . n C 1 1 PRO 1 1 ? ? ? C . n C 1 2 VAL 2 2 ? ? ? C . n C 1 3 VAL 3 3 ? ? ? C . n C 1 4 ILE 4 4 ? ? ? C . n C 1 5 LYS 5 5 ? ? ? C . n C 1 6 THR 6 6 ? ? ? C . n C 1 7 GLU 7 7 ? ? ? C . n C 1 8 GLY 8 8 ? ? ? C . n C 1 9 PRO 9 9 ? ? ? C . n C 1 10 ALA 10 10 10 ALA ALA C . n C 1 11 TRP 11 11 11 TRP TRP C . n C 1 12 THR 12 12 12 THR THR C . n C 1 13 PRO 13 13 13 PRO PRO C . n C 1 14 LEU 14 14 14 LEU LEU C . n C 1 15 GLU 15 15 15 GLU GLU C . n C 1 16 PRO 16 16 16 PRO PRO C . n C 1 17 LYS 17 17 17 LYS LYS C . n C 1 18 LEU 18 18 18 LEU LEU C . n C 1 19 ILE 19 19 19 ILE ILE C . n C 1 20 THR 20 20 20 THR THR C . n C 1 21 ARG 21 21 21 ARG ARG C . n C 1 22 LEU 22 22 22 LEU LEU C . n C 1 23 ALA 23 23 23 ALA ALA C . n C 1 24 ASP 24 24 24 ASP ASP C . n C 1 25 THR 25 25 25 THR THR C . n C 1 26 VAL 26 26 26 VAL VAL C . n C 1 27 ARG 27 27 27 ARG ARG C . n C 1 28 THR 28 28 28 THR THR C . n C 1 29 LYS 29 29 29 LYS LYS C . n C 1 30 GLY 30 30 30 GLY GLY C . n C 1 31 LEU 31 31 31 LEU LEU C . n C 1 32 ARG 32 32 32 ARG ARG C . n C 1 33 SER 33 33 33 SER SER C . n C 1 34 PRO 34 34 34 PRO PRO C . n C 1 35 ILE 35 35 35 ILE ILE C . n C 1 36 THR 36 36 36 THR THR C . n C 1 37 MET 37 37 37 MET MET C . n C 1 38 ALA 38 38 38 ALA ALA C . n C 1 39 GLU 39 39 39 GLU GLU C . n C 1 40 VAL 40 40 40 VAL VAL C . n C 1 41 GLU 41 41 41 GLU GLU C . n C 1 42 ALA 42 42 42 ALA ALA C . n C 1 43 LEU 43 43 43 LEU LEU C . n C 1 44 MET 44 44 44 MET MET C . n C 1 45 SER 45 45 45 SER SER C . n C 1 46 SER 46 46 46 SER SER C . n C 1 47 PRO 47 47 47 PRO PRO C . n C 1 48 LEU 48 48 48 LEU LEU C . n C 1 49 LEU 49 49 49 LEU LEU C . n C 1 50 PRO 50 50 50 PRO PRO C . n C 1 51 HIS 51 51 51 HIS HIS C . n C 1 52 ASP 52 52 52 ASP ASP C . n C 1 53 VAL 53 53 53 VAL VAL C . n C 1 54 THR 54 54 54 THR THR C . n C 1 55 ASN 55 55 55 ASN ASN C . n C 1 56 LEU 56 56 56 LEU LEU C . n C 1 57 MET 57 57 57 MET MET C . n C 1 58 ARG 58 58 58 ARG ARG C . n C 1 59 VAL 59 59 59 VAL VAL C . n C 1 60 ILE 60 60 60 ILE ILE C . n C 1 61 LEU 61 61 61 LEU LEU C . n C 1 62 GLY 62 62 62 GLY GLY C . n C 1 63 PRO 63 63 63 PRO PRO C . n C 1 64 ALA 64 64 64 ALA ALA C . n C 1 65 PRO 65 65 65 PRO PRO C . n C 1 66 TYR 66 66 66 TYR TYR C . n C 1 67 ALA 67 67 67 ALA ALA C . n C 1 68 LEU 68 68 68 LEU LEU C . n C 1 69 TRP 69 69 69 TRP TRP C . n C 1 70 MET 70 70 70 MET MET C . n C 1 71 ASP 71 71 71 ASP ASP C . n C 1 72 ALA 72 72 72 ALA ALA C . n C 1 73 TRP 73 73 73 TRP TRP C . n C 1 74 GLY 74 74 74 GLY GLY C . n C 1 75 VAL 75 75 75 VAL VAL C . n C 1 76 GLN 76 76 76 GLN GLN C . n C 1 77 LEU 77 77 77 LEU LEU C . n C 1 78 GLN 78 78 78 GLN GLN C . n C 1 79 THR 79 79 79 THR THR C . n C 1 80 VAL 80 80 80 VAL VAL C . n C 1 81 ILE 81 81 81 ILE ILE C . n C 1 82 ALA 82 82 82 ALA ALA C . n C 1 83 ALA 83 83 83 ALA ALA C . n C 1 84 ALA 84 84 84 ALA ALA C . n C 1 85 THR 85 85 85 THR THR C . n C 1 86 ARG 86 86 86 ARG ARG C . n C 1 87 ASP 87 87 87 ASP ASP C . n C 1 88 PRO 88 88 88 PRO PRO C . n C 1 89 ARG 89 89 89 ARG ARG C . n C 1 90 HIS 90 90 90 HIS HIS C . n C 1 91 PRO 91 91 91 PRO PRO C . n C 1 92 ALA 92 92 92 ALA ALA C . n C 1 93 ASN 93 93 93 ASN ASN C . n C 1 94 GLY 94 94 94 GLY GLY C . n C 1 95 GLN 95 95 95 GLN GLN C . n C 1 96 GLY 96 96 96 GLY GLY C . n C 1 97 ARG 97 97 97 ARG ARG C . n C 1 98 GLY 98 98 98 GLY GLY C . n C 1 99 GLU 99 99 99 GLU GLU C . n C 1 100 ARG 100 100 100 ARG ARG C . n C 1 101 THR 101 101 101 THR THR C . n C 1 102 ASN 102 102 102 ASN ASN C . n C 1 103 LEU 103 103 103 LEU LEU C . n C 1 104 ASN 104 104 104 ASN ASN C . n C 1 105 ARG 105 105 105 ARG ARG C . n C 1 106 LEU 106 106 106 LEU LEU C . n C 1 107 LYS 107 107 107 LYS LYS C . n C 1 108 GLY 108 108 108 GLY GLY C . n C 1 109 LEU 109 109 109 LEU LEU C . n C 1 110 ALA 110 110 110 ALA ALA C . n C 1 111 ASP 111 111 111 ASP ASP C . n C 1 112 GLY 112 112 112 GLY GLY C . n C 1 113 MET 113 113 113 MET MET C . n C 1 114 VAL 114 114 114 VAL VAL C . n C 1 115 GLY 115 115 115 GLY GLY C . n C 1 116 ASN 116 116 116 ASN ASN C . n C 1 117 PRO 117 117 117 PRO PRO C . n C 1 118 GLN 118 118 118 GLN GLN C . n C 1 119 GLY 119 119 119 GLY GLY C . n C 1 120 GLN 120 120 120 GLN GLN C . n C 1 121 ALA 121 121 121 ALA ALA C . n C 1 122 ALA 122 122 122 ALA ALA C . n C 1 123 LEU 123 123 123 LEU LEU C . n C 1 124 LEU 124 124 124 LEU LEU C . n C 1 125 ARG 125 125 125 ARG ARG C . n C 1 126 PRO 126 126 126 PRO PRO C . n C 1 127 GLY 127 127 127 GLY GLY C . n C 1 128 GLU 128 128 128 GLU GLU C . n C 1 129 LEU 129 129 129 LEU LEU C . n C 1 130 VAL 130 130 130 VAL VAL C . n C 1 131 ALA 131 131 131 ALA ALA C . n C 1 132 ILE 132 132 132 ILE ILE C . n C 1 133 THR 133 133 133 THR THR C . n C 1 134 ALA 134 134 134 ALA ALA C . n C 1 135 SER 135 135 135 SER SER C . n C 1 136 ALA 136 136 136 ALA ALA C . n C 1 137 LEU 137 137 137 LEU LEU C . n C 1 138 GLN 138 138 138 GLN GLN C . n C 1 139 ALA 139 139 139 ALA ALA C . n C 1 140 PHE 140 140 140 PHE PHE C . n C 1 141 ARG 141 141 141 ARG ARG C . n C 1 142 GLU 142 142 142 GLU GLU C . n C 1 143 VAL 143 143 143 VAL VAL C . n C 1 144 ALA 144 144 144 ALA ALA C . n C 1 145 ARG 145 145 145 ARG ARG C . n C 1 146 LEU 146 146 146 LEU LEU C . n C 1 147 ALA 147 147 147 ALA ALA C . n C 1 148 GLU 148 148 148 GLU GLU C . n C 1 149 PRO 149 149 149 PRO PRO C . n C 1 150 ALA 150 150 150 ALA ALA C . n C 1 151 GLY 151 151 151 GLY GLY C . n C 1 152 PRO 152 152 152 PRO PRO C . n C 1 153 TRP 153 153 153 TRP TRP C . n C 1 154 ALA 154 154 154 ALA ALA C . n C 1 155 ASP 155 155 155 ASP ASP C . n C 1 156 ILE 156 156 156 ILE ILE C . n C 1 157 MET 157 157 157 MET MET C . n C 1 158 GLN 158 158 158 GLN GLN C . n C 1 159 GLY 159 159 159 GLY GLY C . n C 1 160 PRO 160 160 160 PRO PRO C . n C 1 161 SER 161 161 161 SER SER C . n C 1 162 GLU 162 162 162 GLU GLU C . n C 1 163 SER 163 163 163 SER SER C . n C 1 164 PHE 164 164 164 PHE PHE C . n C 1 165 VAL 165 165 165 VAL VAL C . n C 1 166 ASP 166 166 166 ASP ASP C . n C 1 167 PHE 167 167 167 PHE PHE C . n C 1 168 ALA 168 168 168 ALA ALA C . n C 1 169 ASN 169 169 169 ASN ASN C . n C 1 170 ARG 170 170 170 ARG ARG C . n C 1 171 LEU 171 171 171 LEU LEU C . n C 1 172 ILE 172 172 172 ILE ILE C . n C 1 173 LYS 173 173 173 LYS LYS C . n C 1 174 ALA 174 174 174 ALA ALA C . n C 1 175 VAL 175 175 175 VAL VAL C . n C 1 176 GLU 176 176 176 GLU GLU C . n C 1 177 GLY 177 177 177 GLY GLY C . n C 1 178 SER 178 178 178 SER SER C . n C 1 179 ASP 179 179 179 ASP ASP C . n C 1 180 LEU 180 180 180 LEU LEU C . n C 1 181 PRO 181 181 181 PRO PRO C . n C 1 182 PRO 182 182 182 PRO PRO C . n C 1 183 SER 183 183 183 SER SER C . n C 1 184 ALA 184 184 184 ALA ALA C . n C 1 185 ARG 185 185 185 ARG ARG C . n C 1 186 ALA 186 186 186 ALA ALA C . n C 1 187 PRO 187 187 187 PRO PRO C . n C 1 188 VAL 188 188 188 VAL VAL C . n C 1 189 ILE 189 189 189 ILE ILE C . n C 1 190 ILE 190 190 190 ILE ILE C . n C 1 191 ASP 191 191 191 ASP ASP C . n C 1 192 CYS 192 192 192 CYS CYS C . n C 1 193 PHE 193 193 193 PHE PHE C . n C 1 194 ARG 194 194 194 ARG ARG C . n C 1 195 GLN 195 195 195 GLN GLN C . n C 1 196 LYS 196 196 196 LYS LYS C . n C 1 197 SER 197 197 197 SER SER C . n C 1 198 GLN 198 198 198 GLN GLN C . n C 1 199 PRO 199 199 199 PRO PRO C . n C 1 200 ASP 200 200 200 ASP ASP C . n C 1 201 ILE 201 201 201 ILE ILE C . n C 1 202 GLN 202 202 202 GLN GLN C . n C 1 203 GLN 203 203 203 GLN GLN C . n C 1 204 LEU 204 204 204 LEU LEU C . n C 1 205 ILE 205 205 205 ILE ILE C . n C 1 206 ARG 206 206 206 ARG ARG C . n C 1 207 THR 207 207 207 THR THR C . n C 1 208 ALA 208 208 208 ALA ALA C . n C 1 209 PRO 209 209 209 PRO PRO C . n C 1 210 SER 210 210 210 SER SER C . n C 1 211 THR 211 211 211 THR THR C . n C 1 212 LEU 212 212 212 LEU LEU C . n C 1 213 THR 213 213 213 THR THR C . n C 1 214 THR 214 214 214 THR THR C . n C 1 215 PRO 215 215 215 PRO PRO C . n C 1 216 GLY 216 216 216 GLY GLY C . n C 1 217 GLU 217 217 217 GLU GLU C . n C 1 218 ILE 218 218 218 ILE ILE C . n C 1 219 ILE 219 219 219 ILE ILE C . n C 1 220 LYS 220 220 220 LYS LYS C . n C 1 221 TYR 221 221 221 TYR TYR C . n C 1 222 VAL 222 222 222 VAL VAL C . n C 1 223 LEU 223 223 223 LEU LEU C . n C 1 224 ASP 224 224 224 ASP ASP C . n C 1 225 ARG 225 225 225 ARG ARG C . n C 1 226 GLN 226 226 226 GLN GLN C . n C 1 227 LYS 227 227 227 LYS LYS C . n C 1 228 THR 228 228 228 THR THR C . n C 1 229 ALA 229 229 229 ALA ALA C . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details 'UCSF CHIMERA 1.13.1_b41965.' _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' ? ? 1.000000 0.000000 0.000000 0.00000 0.000000 1.000000 0.000000 0.00000 0.000000 0.000000 1.000000 0.00000 2 'point symmetry operation' ? ? -1.000000 -0.000000 0.000000 297.42722 0.000000 -1.000000 0.000000 297.42722 0.000000 0.000000 1.000000 0.00000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-04-21 2 'Structure model' 1 1 2021-06-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_citation_author.identifier_ORCID' 13 2 'Structure model' '_citation_author.name' # _em_3d_fitting.entry_id 7NO2 _em_3d_fitting.id 1 _em_3d_fitting.details ;Three copies of CA monomer were rigid body-fitted into the EM density to accommodate the 3 symmetry independent CA copies. The fit was further refined in Coot. The symmetry independent copies were expanded according to the C2 symmetry, and an additional ring of CTDs adjacent to the CA hexamer was added to account for the continuous lattice during the refinement. The model was refined by iterating between automatic real space refinement in Phenix and manual model inspection/editing in Coot. ; _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'AB INITIO MODEL' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria 'Correlation coefficient' _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.details ? _em_3d_fitting_list.pdb_chain_id A _em_3d_fitting_list.pdb_chain_residue_range 10-226 _em_3d_fitting_list.pdb_entry_id 3TIR # _em_3d_reconstruction.entry_id 7NO2 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm 'BACK PROJECTION' _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 40962 _em_3d_reconstruction.resolution 4.3 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 6.2 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Rous sarcoma virus - Prague C' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type VIRUS _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 7NO2 _em_image_scans.id 1 _em_image_scans.dimension_height 3838 _em_image_scans.dimension_width 3708 _em_image_scans.frames_per_image 10 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image 1-10 _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 7NO2 _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure 'ZEMLIN TABLEAU' _em_imaging.c2_aperture_diameter 100 _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ;Areas of interest for high-resolution data collection were identified in low magnification montages. Prior to tomogram acquisition, gain references were acquired and the filter was fully tuned. Microscope tuning was performed using the FEI AutoCTF software. The ilumination mode used during acquisition was nanoprobe. ; _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max 4000 _em_imaging.nominal_defocus_min 1500 _em_imaging.nominal_magnification 105000 _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type C-flat-2/2 _em_sample_support.method ? _em_sample_support.film_material ? # _em_virus_entity.entity_assembly_id 1 _em_virus_entity.empty YES _em_virus_entity.enveloped NO _em_virus_entity.virus_isolate OTHER _em_virus_entity.virus_type 'VIRUS-LIKE PARTICLE' _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.details ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 277 _em_vitrification.cryogen_name ETHANE _em_vitrification.details '2.5 seconds blotting time' _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 7NO2 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7NO2 _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SUBTOMOGRAM AVERAGING' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 7NO2 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C2 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B ALA 92 ? ? OG1 B THR 101 ? ? 2.08 2 1 O A PRO 16 ? ? OG1 A THR 20 ? ? 2.13 3 1 O C LEU 204 ? ? OG1 C THR 207 ? ? 2.16 4 1 O B GLN 76 ? ? OG1 B THR 79 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 13 ? ? -78.93 -159.89 2 1 THR A 28 ? ? -89.95 -70.77 3 1 LYS A 29 ? ? -63.77 -76.92 4 1 SER A 45 ? ? -140.78 -38.62 5 1 PRO A 88 ? ? -59.14 -3.91 6 1 GLU A 99 ? ? -107.42 66.81 7 1 MET A 113 ? ? -136.83 -34.44 8 1 LEU A 123 ? ? -117.87 -88.51 9 1 PRO A 152 ? ? -68.61 90.19 10 1 SER A 161 ? ? -68.21 4.14 11 1 ALA A 184 ? ? -71.95 42.10 12 1 THR A 207 ? ? -69.79 14.91 13 1 SER A 210 ? ? -67.99 70.34 14 1 PRO B 13 ? ? -75.40 -161.76 15 1 ARG B 89 ? ? -69.22 5.69 16 1 ALA B 150 ? ? -146.62 -99.97 17 1 PRO B 160 ? ? -67.77 1.21 18 1 SER B 161 ? ? -150.18 -5.88 19 1 ALA B 184 ? ? -90.23 41.05 20 1 ALA B 186 ? ? -96.62 -63.95 21 1 LYS B 196 ? ? -140.01 -30.01 22 1 THR B 213 ? ? -111.23 -75.39 23 1 ARG B 225 ? ? -68.63 2.97 24 1 PRO C 13 ? ? -71.20 -163.02 25 1 ARG C 89 ? ? -80.94 32.42 26 1 ALA C 154 ? ? -67.91 12.32 27 1 SER C 161 ? ? -155.80 24.94 28 1 SER C 178 ? ? -165.43 -159.58 29 1 ARG C 185 ? ? -96.85 -78.26 30 1 THR C 214 ? ? -173.20 136.85 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 1 ? A PRO 1 2 1 Y 1 A VAL 2 ? A VAL 2 3 1 Y 1 A VAL 3 ? A VAL 3 4 1 Y 1 A ILE 4 ? A ILE 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A THR 6 ? A THR 6 7 1 Y 1 A GLU 7 ? A GLU 7 8 1 Y 1 A GLY 8 ? A GLY 8 9 1 Y 1 A PRO 9 ? A PRO 9 10 1 Y 1 B PRO 1 ? B PRO 1 11 1 Y 1 B VAL 2 ? B VAL 2 12 1 Y 1 B VAL 3 ? B VAL 3 13 1 Y 1 B ILE 4 ? B ILE 4 14 1 Y 1 B LYS 5 ? B LYS 5 15 1 Y 1 B THR 6 ? B THR 6 16 1 Y 1 B GLU 7 ? B GLU 7 17 1 Y 1 B GLY 8 ? B GLY 8 18 1 Y 1 B PRO 9 ? B PRO 9 19 1 Y 1 C PRO 1 ? C PRO 1 20 1 Y 1 C VAL 2 ? C VAL 2 21 1 Y 1 C VAL 3 ? C VAL 3 22 1 Y 1 C ILE 4 ? C ILE 4 23 1 Y 1 C LYS 5 ? C LYS 5 24 1 Y 1 C THR 6 ? C THR 6 25 1 Y 1 C GLU 7 ? C GLU 7 26 1 Y 1 C GLY 8 ? C GLY 8 27 1 Y 1 C PRO 9 ? C PRO 9 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 20 mM MES '2-(N-morpholino)ethanesulfonic acid' 1 2 100 mM NaCl 'sodium chloride' 1 3 2 nM TCEP 'tris(2-carboxyethyl)phosphine' 1 4 100 microM IP6 'inositol hexakisphosphate' # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details 'CTF-correction was initially performed using ctfphaseflip in IMOD and NovaCTF in the final steps' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 11888 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Rous sarcoma virus - Prague C' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 469008 _em_entity_assembly_recombinant.organism 'Escherichia coli BL21(DE3)' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 3.5 _em_image_recording.average_exposure_time 1.4 _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 QUANTUM (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images ? # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name 'GIF Quantum LS' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'VOLUME SELECTION' ? MATLAB R2018b 1 ? ? 2 'VOLUME SELECTION' ? IMOD 4.9 1 ? ? 3 'VOLUME SELECTION' ? Dynamo 1.1.333 1 ? ? 4 'IMAGE ACQUISITION' ? SerialEM ? ? ? 1 5 'IMAGE ACQUISITION' ? DigitalMicrograph ? ? ? 1 6 MASKING ? ? ? ? ? ? 7 'CTF CORRECTION' ? CTFFIND 4.1.10 1 ? ? 8 'CTF CORRECTION' ? IMOD 4.9 1 ? ? 9 'CTF CORRECTION' ? NOVACTF ? 1 ? ? 10 'LAYERLINE INDEXING' ? ? ? ? ? ? 11 'DIFFRACTION INDEXING' ? ? ? ? ? ? 12 'MODEL FITTING' ? 'UCSF Chimera' 1.13.1 ? 1 ? 13 'MODEL FITTING' ? Coot 0.8.9.1 ? 1 ? 14 OTHER ? ? ? ? ? ? 15 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 16 'FINAL EULER ASSIGNMENT' ? Dynamo 1.1.333 1 ? ? 17 CLASSIFICATION ? MATLAB R2018b 1 ? ? 18 RECONSTRUCTION ? Dynamo 1.1.333 1 ? ? 19 RECONSTRUCTION 'amplitude reweighting using AV3' AV3 ? 1 ? ? 20 'MODEL REFINEMENT' ? PHENIX 1.18 ? 1 ? 21 'MODEL REFINEMENT' ? Coot 0.8.9.1 ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _em_virus_natural_host.id 1 _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.ncbi_tax_id 32644 _em_virus_natural_host.organism unidentified _em_virus_natural_host.strain ? # _em_virus_shell.id 1 _em_virus_shell.entity_assembly_id 1 _em_virus_shell.diameter ? _em_virus_shell.name 'CANC tubes' _em_virus_shell.triangulation ? # _em_volume_selection.id 1 _em_volume_selection.details ? _em_volume_selection.image_processing_id 1 _em_volume_selection.method ? _em_volume_selection.num_tomograms 44 _em_volume_selection.num_volumes_extracted 45088 _em_volume_selection.reference_model ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Austrian Science Fund' Austria P31445 1 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' R01AI147890 2 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' R01AI150454 3 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' R35GM136258 4 'European Union (EU)' 'European Union' 'Horizon 2020, iNEXT (PID4246) , Grant number 653706' 5 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #