HEADER NUCLEAR PROTEIN 26-FEB-21 7NOW TITLE COMPLEX OF NUCLEOPORIN-98 AND NANOBODY MS98-27 SOLVED AT 1.85A TITLE 2 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI-NUP98 NANOBODY MS98-27; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: NUCLEAR PORE COMPLEX PROTEIN NUP98; COMPND 7 CHAIN: B, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 3 ORGANISM_TAXID: 30538; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: NEB EXPRESS; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PMSC130; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: XENOPUS TROPICALIS; SOURCE 10 ORGANISM_COMMON: TROPICAL CLAWED FROG; SOURCE 11 ORGANISM_TAXID: 8364; SOURCE 12 GENE: NUP98; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_STRAIN: NEB EXPRESS; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PTP290 KEYWDS NUP98, NANOBODY, COMPLEX, NUCLEAR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.SOLA-COLOM,S.TRAKHANOV,D.GOERLICH REVDAT 3 31-JAN-24 7NOW 1 REMARK REVDAT 2 02-AUG-23 7NOW 1 COMPND SOURCE DBREF SEQADV REVDAT 1 07-APR-21 7NOW 0 JRNL AUTH M.SOLA-COLOM,S.TRAKHANOV,D.GOERLICH JRNL TITL COMPLEX OF NUCLEOPORIN-98 AND NANOBODY MS98-27 SOLVED AT JRNL TITL 2 1.85A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 88184 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4411 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.8000 - 5.7500 1.00 2844 151 0.1514 0.1779 REMARK 3 2 5.7500 - 4.5600 1.00 2828 148 0.1235 0.1488 REMARK 3 3 4.5600 - 3.9800 1.00 2821 149 0.1264 0.1464 REMARK 3 4 3.9800 - 3.6200 1.00 2800 147 0.1532 0.1753 REMARK 3 5 3.6200 - 3.3600 1.00 2801 148 0.1686 0.1773 REMARK 3 6 3.3600 - 3.1600 1.00 2813 148 0.1914 0.2288 REMARK 3 7 3.1600 - 3.0000 1.00 2806 147 0.2028 0.2188 REMARK 3 8 3.0000 - 2.8700 1.00 2797 148 0.2021 0.2483 REMARK 3 9 2.8700 - 2.7600 1.00 2788 146 0.2010 0.2294 REMARK 3 10 2.7600 - 2.6700 1.00 2823 149 0.1956 0.2245 REMARK 3 11 2.6700 - 2.5800 1.00 2792 147 0.1989 0.2398 REMARK 3 12 2.5800 - 2.5100 1.00 2787 147 0.2107 0.2512 REMARK 3 13 2.5100 - 2.4400 1.00 2812 148 0.2062 0.2461 REMARK 3 14 2.4400 - 2.3800 1.00 2772 146 0.2165 0.2444 REMARK 3 15 2.3800 - 2.3300 1.00 2826 148 0.2122 0.2880 REMARK 3 16 2.3300 - 2.2800 1.00 2768 146 0.2143 0.2166 REMARK 3 17 2.2800 - 2.2400 1.00 2795 147 0.2244 0.2411 REMARK 3 18 2.2400 - 2.1900 1.00 2795 148 0.2280 0.2621 REMARK 3 19 2.1900 - 2.1500 1.00 2799 147 0.2355 0.2510 REMARK 3 20 2.1500 - 2.1200 1.00 2752 145 0.2532 0.2802 REMARK 3 21 2.1200 - 2.0800 1.00 2809 148 0.2551 0.2877 REMARK 3 22 2.0800 - 2.0500 1.00 2809 148 0.2851 0.2799 REMARK 3 23 2.0500 - 2.0200 1.00 2763 145 0.2923 0.3183 REMARK 3 24 2.0200 - 1.9900 0.99 2779 146 0.3234 0.3552 REMARK 3 25 1.9900 - 1.9700 1.00 2797 148 0.3385 0.3604 REMARK 3 26 1.9700 - 1.9400 1.00 2767 145 0.3451 0.3668 REMARK 3 27 1.9400 - 1.9200 0.99 2774 145 0.3641 0.3533 REMARK 3 28 1.9200 - 1.8900 0.99 2797 147 0.3786 0.3780 REMARK 3 29 1.8900 - 1.8700 0.99 2762 146 0.4351 0.3912 REMARK 3 30 1.8700 - 1.8500 0.97 2697 143 0.4664 0.4780 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.281 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.551 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4520 REMARK 3 ANGLE : 0.896 6127 REMARK 3 CHIRALITY : 0.057 645 REMARK 3 PLANARITY : 0.005 797 REMARK 3 DIHEDRAL : 3.422 2844 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 33 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.1635 54.7589 53.8255 REMARK 3 T TENSOR REMARK 3 T11: 0.3324 T22: 0.4841 REMARK 3 T33: 0.4636 T12: -0.0878 REMARK 3 T13: 0.0263 T23: -0.0309 REMARK 3 L TENSOR REMARK 3 L11: 4.4682 L22: 1.2658 REMARK 3 L33: 5.5347 L12: 0.7471 REMARK 3 L13: 2.7499 L23: -1.4235 REMARK 3 S TENSOR REMARK 3 S11: 0.1515 S12: -0.0037 S13: -0.8790 REMARK 3 S21: -0.3986 S22: 0.0384 S23: 1.1188 REMARK 3 S31: 0.1337 S32: -0.5883 S33: -0.1904 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 19 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.7768 53.8533 58.3949 REMARK 3 T TENSOR REMARK 3 T11: 0.3299 T22: 0.4223 REMARK 3 T33: 0.5348 T12: -0.0299 REMARK 3 T13: -0.0034 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 7.9944 L22: 2.7284 REMARK 3 L33: 7.3324 L12: -3.7969 REMARK 3 L13: 2.9120 L23: -3.5472 REMARK 3 S TENSOR REMARK 3 S11: 0.1563 S12: -0.7512 S13: -0.7555 REMARK 3 S21: -0.2649 S22: 0.3789 S23: 0.8538 REMARK 3 S31: 0.1011 S32: -0.7308 S33: -0.4208 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.1822 53.1880 53.8140 REMARK 3 T TENSOR REMARK 3 T11: 0.4341 T22: 0.3088 REMARK 3 T33: 0.4816 T12: 0.0171 REMARK 3 T13: -0.0694 T23: -0.0418 REMARK 3 L TENSOR REMARK 3 L11: 8.9087 L22: 2.8722 REMARK 3 L33: 8.8471 L12: -2.4443 REMARK 3 L13: 4.3483 L23: -4.4579 REMARK 3 S TENSOR REMARK 3 S11: 0.5400 S12: -0.0881 S13: -0.8571 REMARK 3 S21: -0.1736 S22: -0.2750 S23: 0.3727 REMARK 3 S31: 0.6381 S32: 0.0871 S33: 0.1034 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.1224 59.4022 44.4395 REMARK 3 T TENSOR REMARK 3 T11: 0.4623 T22: 0.7468 REMARK 3 T33: 0.4439 T12: 0.0678 REMARK 3 T13: -0.0901 T23: -0.1068 REMARK 3 L TENSOR REMARK 3 L11: 2.3839 L22: 7.4098 REMARK 3 L33: 8.3070 L12: 3.6114 REMARK 3 L13: 3.3988 L23: 2.8675 REMARK 3 S TENSOR REMARK 3 S11: -0.1069 S12: 0.9127 S13: -0.2391 REMARK 3 S21: -0.9269 S22: 0.3398 S23: 0.3640 REMARK 3 S31: -0.1058 S32: -0.4653 S33: -0.4862 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.9300 63.9227 55.7551 REMARK 3 T TENSOR REMARK 3 T11: 0.4795 T22: 0.3659 REMARK 3 T33: 0.5271 T12: 0.0701 REMARK 3 T13: -0.0981 T23: -0.0421 REMARK 3 L TENSOR REMARK 3 L11: 2.1512 L22: 0.2177 REMARK 3 L33: 3.5494 L12: 0.3146 REMARK 3 L13: -0.4489 L23: 0.0539 REMARK 3 S TENSOR REMARK 3 S11: 0.0698 S12: 0.1383 S13: 0.0370 REMARK 3 S21: -0.0019 S22: 0.0809 S23: 0.2182 REMARK 3 S31: -0.1326 S32: 0.0931 S33: -0.1305 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.1477 56.7126 61.2681 REMARK 3 T TENSOR REMARK 3 T11: 0.3990 T22: 0.3931 REMARK 3 T33: 0.5402 T12: -0.0039 REMARK 3 T13: -0.0069 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 5.6938 L22: 7.3886 REMARK 3 L33: 6.3933 L12: -6.0020 REMARK 3 L13: 4.5183 L23: -6.3352 REMARK 3 S TENSOR REMARK 3 S11: 0.1758 S12: -0.0721 S13: -0.0259 REMARK 3 S21: -0.3185 S22: -0.2465 S23: 0.1442 REMARK 3 S31: 0.1440 S32: -0.0882 S33: 0.0406 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 85 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.4466 67.5314 47.8071 REMARK 3 T TENSOR REMARK 3 T11: 0.5823 T22: 0.6926 REMARK 3 T33: 0.4850 T12: 0.0958 REMARK 3 T13: -0.0737 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 9.8458 L22: 7.7686 REMARK 3 L33: 5.3999 L12: -3.1599 REMARK 3 L13: 0.1959 L23: 5.1481 REMARK 3 S TENSOR REMARK 3 S11: 0.1993 S12: 1.4166 S13: 0.2580 REMARK 3 S21: -1.1434 S22: -0.3916 S23: 0.4207 REMARK 3 S31: -1.3534 S32: -0.6690 S33: 0.2320 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.2057 55.4713 49.4284 REMARK 3 T TENSOR REMARK 3 T11: 0.3737 T22: 0.3412 REMARK 3 T33: 0.3659 T12: 0.0250 REMARK 3 T13: -0.0541 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 2.5843 L22: 3.3689 REMARK 3 L33: 2.2445 L12: -2.0184 REMARK 3 L13: -1.2316 L23: -0.5940 REMARK 3 S TENSOR REMARK 3 S11: 0.0089 S12: 0.4560 S13: -0.5764 REMARK 3 S21: -0.2797 S22: -0.2220 S23: 0.2411 REMARK 3 S31: -0.1550 S32: -0.1580 S33: 0.1796 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 107 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2037 59.3410 46.2869 REMARK 3 T TENSOR REMARK 3 T11: 0.3707 T22: 0.4101 REMARK 3 T33: 0.4493 T12: 0.0325 REMARK 3 T13: 0.0030 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 5.8052 L22: 6.2500 REMARK 3 L33: 8.3124 L12: 2.9147 REMARK 3 L13: 2.2550 L23: -1.3432 REMARK 3 S TENSOR REMARK 3 S11: 0.1989 S12: 0.1507 S13: 0.3889 REMARK 3 S21: -0.1235 S22: -0.3273 S23: -0.3262 REMARK 3 S31: 0.0058 S32: -0.2188 S33: 0.2925 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.7029 54.5353 48.4307 REMARK 3 T TENSOR REMARK 3 T11: 0.3923 T22: 0.4623 REMARK 3 T33: 0.4781 T12: 0.0206 REMARK 3 T13: -0.1102 T23: -0.1092 REMARK 3 L TENSOR REMARK 3 L11: 3.3424 L22: 7.4439 REMARK 3 L33: 2.7075 L12: -2.6485 REMARK 3 L13: -0.8534 L23: 0.2519 REMARK 3 S TENSOR REMARK 3 S11: 0.1555 S12: 0.0282 S13: -0.7188 REMARK 3 S21: -0.5901 S22: -0.1590 S23: 1.1865 REMARK 3 S31: 0.1570 S32: -0.6979 S33: -0.0003 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 714 THROUGH 726 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7961 81.7750 57.4460 REMARK 3 T TENSOR REMARK 3 T11: 0.5128 T22: 0.7027 REMARK 3 T33: 0.6313 T12: -0.2102 REMARK 3 T13: -0.0614 T23: -0.0411 REMARK 3 L TENSOR REMARK 3 L11: 0.6651 L22: 4.4058 REMARK 3 L33: 3.6392 L12: 0.9569 REMARK 3 L13: 1.0842 L23: 3.3749 REMARK 3 S TENSOR REMARK 3 S11: 0.1468 S12: -1.1109 S13: 0.6634 REMARK 3 S21: 1.2224 S22: -0.6054 S23: -1.1087 REMARK 3 S31: -0.3448 S32: -0.2446 S33: 0.4457 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 727 THROUGH 738 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9672 80.4844 50.4485 REMARK 3 T TENSOR REMARK 3 T11: 0.4931 T22: 0.5259 REMARK 3 T33: 0.6142 T12: -0.0766 REMARK 3 T13: -0.0074 T23: 0.0782 REMARK 3 L TENSOR REMARK 3 L11: 7.8121 L22: 2.2220 REMARK 3 L33: 5.2597 L12: -2.6935 REMARK 3 L13: 3.2702 L23: -1.6483 REMARK 3 S TENSOR REMARK 3 S11: -0.0752 S12: -0.1432 S13: 0.9636 REMARK 3 S21: 0.1880 S22: -0.2799 S23: -1.2969 REMARK 3 S31: -0.3741 S32: 0.3799 S33: 0.5673 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 739 THROUGH 781 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.4381 77.6364 48.5092 REMARK 3 T TENSOR REMARK 3 T11: 0.3361 T22: 0.4012 REMARK 3 T33: 0.3238 T12: -0.0266 REMARK 3 T13: 0.0123 T23: 0.0310 REMARK 3 L TENSOR REMARK 3 L11: 7.5022 L22: 3.6860 REMARK 3 L33: 3.1579 L12: 0.0120 REMARK 3 L13: 2.2459 L23: -0.7661 REMARK 3 S TENSOR REMARK 3 S11: 0.1351 S12: -0.2461 S13: 0.3411 REMARK 3 S21: -0.0686 S22: -0.4043 S23: -0.3125 REMARK 3 S31: 0.0194 S32: 0.0974 S33: 0.3184 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 782 THROUGH 804 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.6248 70.7637 49.5205 REMARK 3 T TENSOR REMARK 3 T11: 0.4014 T22: 0.4274 REMARK 3 T33: 0.3048 T12: -0.0183 REMARK 3 T13: 0.0242 T23: 0.0709 REMARK 3 L TENSOR REMARK 3 L11: 3.7215 L22: 8.6664 REMARK 3 L33: 2.6687 L12: -3.5767 REMARK 3 L13: 1.9623 L23: -0.5613 REMARK 3 S TENSOR REMARK 3 S11: -0.0287 S12: -0.3656 S13: -0.0425 REMARK 3 S21: 0.1343 S22: -0.2434 S23: 0.1995 REMARK 3 S31: -0.1534 S32: -0.1948 S33: 0.1389 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 805 THROUGH 825 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6491 51.3062 52.9552 REMARK 3 T TENSOR REMARK 3 T11: 0.3855 T22: 0.3782 REMARK 3 T33: 0.4320 T12: 0.0458 REMARK 3 T13: 0.0525 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 2.6916 L22: 6.8950 REMARK 3 L33: 3.4884 L12: -3.7962 REMARK 3 L13: 3.1503 L23: -4.0381 REMARK 3 S TENSOR REMARK 3 S11: 0.0211 S12: 0.3104 S13: -0.0524 REMARK 3 S21: 0.4575 S22: -0.1303 S23: 0.0605 REMARK 3 S31: -0.1512 S32: 0.0861 S33: 0.0439 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 826 THROUGH 833 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7417 43.7277 44.9332 REMARK 3 T TENSOR REMARK 3 T11: 0.5019 T22: 0.5261 REMARK 3 T33: 0.5522 T12: 0.1280 REMARK 3 T13: 0.0680 T23: -0.0359 REMARK 3 L TENSOR REMARK 3 L11: 2.0769 L22: 7.5751 REMARK 3 L33: 7.2484 L12: -3.6465 REMARK 3 L13: 2.7044 L23: -4.1865 REMARK 3 S TENSOR REMARK 3 S11: 0.5992 S12: 1.0366 S13: -0.3981 REMARK 3 S21: -1.1039 S22: -0.5155 S23: -0.2212 REMARK 3 S31: 0.5009 S32: 0.7490 S33: -0.0103 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 834 THROUGH 845 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0273 51.4053 42.1711 REMARK 3 T TENSOR REMARK 3 T11: 0.5488 T22: 0.4528 REMARK 3 T33: 0.5464 T12: 0.0272 REMARK 3 T13: -0.0453 T23: -0.0486 REMARK 3 L TENSOR REMARK 3 L11: 5.1808 L22: 5.1241 REMARK 3 L33: 6.0585 L12: -5.1476 REMARK 3 L13: 1.5785 L23: -1.8644 REMARK 3 S TENSOR REMARK 3 S11: 0.4308 S12: 0.9510 S13: -1.2963 REMARK 3 S21: -0.8733 S22: -0.1446 S23: 0.5441 REMARK 3 S31: 0.4927 S32: 0.2433 S33: -0.3233 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 846 THROUGH 857 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9680 56.6204 42.3870 REMARK 3 T TENSOR REMARK 3 T11: 0.3957 T22: 0.4405 REMARK 3 T33: 0.4403 T12: 0.0493 REMARK 3 T13: 0.1304 T23: 0.0474 REMARK 3 L TENSOR REMARK 3 L11: 6.1386 L22: 8.0307 REMARK 3 L33: 2.4587 L12: -2.6324 REMARK 3 L13: -0.8823 L23: -2.1993 REMARK 3 S TENSOR REMARK 3 S11: 0.0756 S12: 0.4186 S13: 0.1122 REMARK 3 S21: -0.4951 S22: -0.5056 S23: -1.0911 REMARK 3 S31: 0.4676 S32: 0.7856 S33: 0.2792 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 858 THROUGH 866 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5049 63.0374 43.0835 REMARK 3 T TENSOR REMARK 3 T11: 0.4584 T22: 0.3996 REMARK 3 T33: 0.4351 T12: -0.0100 REMARK 3 T13: 0.0071 T23: 0.0727 REMARK 3 L TENSOR REMARK 3 L11: 4.9197 L22: 4.8017 REMARK 3 L33: 7.6622 L12: -4.7572 REMARK 3 L13: 4.5509 L23: -4.5856 REMARK 3 S TENSOR REMARK 3 S11: 0.6059 S12: 0.7007 S13: -0.2380 REMARK 3 S21: -0.5539 S22: -0.5237 S23: 0.0373 REMARK 3 S31: 0.2649 S32: 0.0990 S33: -0.1538 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 2 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5481 99.0123 34.0463 REMARK 3 T TENSOR REMARK 3 T11: 0.3174 T22: 0.4998 REMARK 3 T33: 0.5802 T12: -0.1460 REMARK 3 T13: 0.0255 T23: 0.1189 REMARK 3 L TENSOR REMARK 3 L11: 6.3618 L22: 7.2657 REMARK 3 L33: 8.0984 L12: -3.9426 REMARK 3 L13: 1.8023 L23: -1.9149 REMARK 3 S TENSOR REMARK 3 S11: -0.0122 S12: 0.4098 S13: 1.3970 REMARK 3 S21: 0.0571 S22: -0.1851 S23: -1.0661 REMARK 3 S31: -0.7763 S32: 0.6151 S33: 0.2880 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 19 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.2781 106.9204 41.9051 REMARK 3 T TENSOR REMARK 3 T11: 0.7385 T22: 0.5117 REMARK 3 T33: 0.9434 T12: -0.0210 REMARK 3 T13: -0.1503 T23: -0.0383 REMARK 3 L TENSOR REMARK 3 L11: 6.4678 L22: 5.3105 REMARK 3 L33: 7.6231 L12: 0.9387 REMARK 3 L13: -4.3553 L23: -1.9341 REMARK 3 S TENSOR REMARK 3 S11: 0.4585 S12: -0.2142 S13: 2.3844 REMARK 3 S21: 0.6056 S22: 0.1863 S23: -0.8631 REMARK 3 S31: -1.4093 S32: -0.1610 S33: -0.6373 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 34 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.4843 94.7077 40.9109 REMARK 3 T TENSOR REMARK 3 T11: 0.4587 T22: 0.3159 REMARK 3 T33: 0.4562 T12: 0.0098 REMARK 3 T13: -0.0842 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 4.3326 L22: 0.9188 REMARK 3 L33: 3.6192 L12: -0.8670 REMARK 3 L13: -0.8331 L23: -0.0110 REMARK 3 S TENSOR REMARK 3 S11: -0.0618 S12: -0.0865 S13: 0.2713 REMARK 3 S21: 0.2134 S22: 0.0715 S23: -0.2037 REMARK 3 S31: -0.2045 S32: 0.2210 S33: -0.0112 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 116 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.1198 97.7845 32.3089 REMARK 3 T TENSOR REMARK 3 T11: 0.4745 T22: 0.4490 REMARK 3 T33: 0.4494 T12: -0.0389 REMARK 3 T13: -0.0815 T23: 0.0473 REMARK 3 L TENSOR REMARK 3 L11: 4.2441 L22: 3.0817 REMARK 3 L33: 7.2424 L12: -3.0345 REMARK 3 L13: -5.2337 L23: 3.8408 REMARK 3 S TENSOR REMARK 3 S11: -0.3000 S12: 0.3143 S13: 0.3874 REMARK 3 S21: 0.0894 S22: 0.2916 S23: -0.1918 REMARK 3 S31: -0.2729 S32: 0.2016 S33: -0.1367 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 714 THROUGH 726 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.2896 83.9571 69.9242 REMARK 3 T TENSOR REMARK 3 T11: 0.8471 T22: 0.6636 REMARK 3 T33: 0.3149 T12: 0.1126 REMARK 3 T13: -0.0095 T23: 0.0788 REMARK 3 L TENSOR REMARK 3 L11: 2.2673 L22: 0.2662 REMARK 3 L33: 5.2337 L12: 0.3152 REMARK 3 L13: 1.9304 L23: -0.6299 REMARK 3 S TENSOR REMARK 3 S11: -0.2652 S12: -0.8728 S13: -0.1475 REMARK 3 S21: 2.6720 S22: 0.2305 S23: -0.0833 REMARK 3 S31: -0.0080 S32: 0.0534 S33: 0.0935 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 727 THROUGH 738 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.7204 82.3261 68.0042 REMARK 3 T TENSOR REMARK 3 T11: 0.7347 T22: 0.6668 REMARK 3 T33: 0.5525 T12: 0.1739 REMARK 3 T13: 0.2099 T23: 0.1001 REMARK 3 L TENSOR REMARK 3 L11: 2.0951 L22: 2.8354 REMARK 3 L33: 2.6514 L12: -2.4437 REMARK 3 L13: 1.4848 L23: -1.8621 REMARK 3 S TENSOR REMARK 3 S11: -0.3828 S12: -1.0817 S13: -0.4022 REMARK 3 S21: 0.9799 S22: 0.3552 S23: 1.0989 REMARK 3 S31: -0.0278 S32: -0.5142 S33: -0.1765 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 739 THROUGH 755 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.9447 76.2783 62.5966 REMARK 3 T TENSOR REMARK 3 T11: 0.5051 T22: 0.4861 REMARK 3 T33: 0.4870 T12: 0.0900 REMARK 3 T13: 0.1016 T23: 0.0532 REMARK 3 L TENSOR REMARK 3 L11: 2.1055 L22: 7.5404 REMARK 3 L33: 2.7879 L12: -2.5282 REMARK 3 L13: 0.6567 L23: -1.6925 REMARK 3 S TENSOR REMARK 3 S11: -0.2363 S12: -0.3492 S13: -0.4598 REMARK 3 S21: 0.6553 S22: 0.3405 S23: 0.7464 REMARK 3 S31: 0.1953 S32: -0.0060 S33: -0.1158 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 756 THROUGH 773 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.9000 84.1939 58.9736 REMARK 3 T TENSOR REMARK 3 T11: 0.4058 T22: 0.4217 REMARK 3 T33: 0.4116 T12: 0.0550 REMARK 3 T13: 0.0559 T23: 0.0230 REMARK 3 L TENSOR REMARK 3 L11: 3.1993 L22: 6.8278 REMARK 3 L33: 3.9503 L12: -0.6265 REMARK 3 L13: 0.5603 L23: -0.0317 REMARK 3 S TENSOR REMARK 3 S11: 0.1227 S12: -0.1367 S13: -0.1629 REMARK 3 S21: -0.1106 S22: -0.2980 S23: 0.7220 REMARK 3 S31: -0.1256 S32: 0.0510 S33: 0.1995 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 774 THROUGH 781 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.9977 91.4480 61.0475 REMARK 3 T TENSOR REMARK 3 T11: 0.5935 T22: 0.4869 REMARK 3 T33: 0.3547 T12: -0.0144 REMARK 3 T13: -0.0434 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 5.2656 L22: 6.1523 REMARK 3 L33: 6.1809 L12: -5.6812 REMARK 3 L13: 5.6904 L23: -6.0969 REMARK 3 S TENSOR REMARK 3 S11: -0.2211 S12: -0.3954 S13: 0.7357 REMARK 3 S21: 0.8392 S22: -0.1255 S23: -0.4878 REMARK 3 S31: -0.8139 S32: 0.3296 S33: 0.4605 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 782 THROUGH 804 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.0694 87.4277 52.6723 REMARK 3 T TENSOR REMARK 3 T11: 0.4172 T22: 0.3857 REMARK 3 T33: 0.3504 T12: 0.0220 REMARK 3 T13: -0.0745 T23: 0.0613 REMARK 3 L TENSOR REMARK 3 L11: 5.2276 L22: 7.4004 REMARK 3 L33: 5.6019 L12: -0.7428 REMARK 3 L13: -2.4477 L23: 3.3205 REMARK 3 S TENSOR REMARK 3 S11: 0.0499 S12: -0.2843 S13: -0.2843 REMARK 3 S21: 0.0118 S22: -0.2080 S23: -0.2770 REMARK 3 S31: 0.0364 S32: 0.4021 S33: 0.1264 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 805 THROUGH 825 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.2172 108.1990 55.4103 REMARK 3 T TENSOR REMARK 3 T11: 0.4093 T22: 0.3808 REMARK 3 T33: 0.4954 T12: 0.0618 REMARK 3 T13: 0.0126 T23: -0.0191 REMARK 3 L TENSOR REMARK 3 L11: 0.7299 L22: 5.9852 REMARK 3 L33: 1.1552 L12: -1.4170 REMARK 3 L13: -0.1990 L23: 2.4867 REMARK 3 S TENSOR REMARK 3 S11: 0.0271 S12: 0.0336 S13: 0.1220 REMARK 3 S21: 0.3705 S22: -0.1193 S23: -0.1081 REMARK 3 S31: 0.1082 S32: -0.0189 S33: 0.0992 REMARK 3 TLS GROUP : 31 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 826 THROUGH 833 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.4055 112.1504 48.3875 REMARK 3 T TENSOR REMARK 3 T11: 0.4110 T22: 0.4577 REMARK 3 T33: 0.6222 T12: 0.1186 REMARK 3 T13: -0.0706 T23: -0.0416 REMARK 3 L TENSOR REMARK 3 L11: 5.8676 L22: 1.9952 REMARK 3 L33: 1.6984 L12: -0.2684 REMARK 3 L13: 1.6865 L23: -1.6349 REMARK 3 S TENSOR REMARK 3 S11: 0.0221 S12: 0.4367 S13: 0.4902 REMARK 3 S21: -1.0014 S22: -0.0946 S23: 1.0672 REMARK 3 S31: -0.0866 S32: -0.8631 S33: 0.1810 REMARK 3 TLS GROUP : 32 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 834 THROUGH 853 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.5329 99.6848 44.8640 REMARK 3 T TENSOR REMARK 3 T11: 0.4506 T22: 0.3756 REMARK 3 T33: 0.3893 T12: 0.0657 REMARK 3 T13: -0.0250 T23: -0.0652 REMARK 3 L TENSOR REMARK 3 L11: 7.1419 L22: 8.4394 REMARK 3 L33: 6.4684 L12: -6.1241 REMARK 3 L13: -2.8832 L23: 2.5989 REMARK 3 S TENSOR REMARK 3 S11: 0.4421 S12: 0.5740 S13: -0.1674 REMARK 3 S21: -0.2388 S22: -0.3826 S23: 0.3695 REMARK 3 S31: -0.3380 S32: -0.3758 S33: 0.0045 REMARK 3 TLS GROUP : 33 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 854 THROUGH 866 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.9066 94.7685 50.5377 REMARK 3 T TENSOR REMARK 3 T11: 0.4735 T22: 0.3295 REMARK 3 T33: 0.4277 T12: 0.0341 REMARK 3 T13: 0.0057 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 5.0536 L22: 4.7896 REMARK 3 L33: 7.7838 L12: -4.9232 REMARK 3 L13: -4.2102 L23: 4.0266 REMARK 3 S TENSOR REMARK 3 S11: 0.1703 S12: 0.3945 S13: -0.3112 REMARK 3 S21: 0.1001 S22: -0.3316 S23: 0.4246 REMARK 3 S31: 0.0981 S32: -0.3788 S33: 0.2679 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7NOW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1292114355. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : DYNAMICALLY BENDABLE MIRROW REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 88309 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 47.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.650 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5E0Q REMARK 200 REMARK 200 REMARK: CHUNKY PRISMS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 84.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 34% (V/V) PO/OH, 0.1 M TRIS-HCL PH9, REMARK 280 0.16 M AMMONIUM SULFATE, PH 9.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 56.90000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 74.90500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 56.90000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 74.90500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B1075 LIES ON A SPECIAL POSITION. REMARK 375 HOH B1102 LIES ON A SPECIAL POSITION. REMARK 375 HOH B1103 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 366 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY C 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG A 28 O THR B 818 2657 1.85 REMARK 500 O HOH B 1099 O HOH B 1099 2657 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 28 NE - CZ - NH1 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG A 28 NE - CZ - NH2 ANGL. DEV. = 6.9 DEGREES REMARK 500 ARG B 820 NE - CZ - NH1 ANGL. DEV. = -6.9 DEGREES REMARK 500 ARG B 820 NE - CZ - NH2 ANGL. DEV. = 8.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 66 126.86 -38.32 REMARK 500 TYR B 788 109.93 77.36 REMARK 500 ARG B 820 56.03 33.78 REMARK 500 PHE C 30 73.24 -160.30 REMARK 500 SER D 726 -24.87 85.80 REMARK 500 TYR D 788 117.20 74.69 REMARK 500 ASN D 833 53.85 38.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1102 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH B1103 DISTANCE = 6.90 ANGSTROMS REMARK 525 HOH D1118 DISTANCE = 6.00 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 901 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN B 806 O REMARK 620 2 THR B 808 OG1 122.9 REMARK 620 3 HOH B1018 O 122.4 106.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D 901 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C 323 O REMARK 620 2 HOH C 329 O 89.5 REMARK 620 3 HOH C 360 O 63.4 105.6 REMARK 620 4 ARG D 843 O 58.8 97.9 116.5 REMARK 620 5 ALA D 847 O 140.5 129.6 95.6 112.6 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5E0Q RELATED DB: PDB REMARK 900 NUP98 IS THE SAME PROTEIN BUT DIFFERENT NANOBODY DBREF 7NOW A 1 129 PDB 7NOW 7NOW 1 129 DBREF1 7NOW B 716 866 UNP A0A6I8SCP2_XENTR DBREF2 7NOW B A0A6I8SCP2 685 835 DBREF 7NOW C 1 129 PDB 7NOW 7NOW 1 129 DBREF1 7NOW D 716 866 UNP A0A6I8SCP2_XENTR DBREF2 7NOW D A0A6I8SCP2 685 835 SEQADV 7NOW GLY B 714 UNP A0A6I8SCP EXPRESSION TAG SEQADV 7NOW SER B 715 UNP A0A6I8SCP EXPRESSION TAG SEQADV 7NOW GLY D 714 UNP A0A6I8SCP EXPRESSION TAG SEQADV 7NOW SER D 715 UNP A0A6I8SCP EXPRESSION TAG SEQRES 1 A 129 GLY GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL SEQRES 2 A 129 GLN ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 A 129 GLY ARG THR PHE SER THR TYR ALA MET GLY TRP PHE ARG SEQRES 4 A 129 GLN ALA PRO GLY LYS GLU ARG GLU PHE VAL SER ALA CYS SEQRES 5 A 129 SER TRP SER GLY GLY ILE THR ARG TYR ALA ASP SER VAL SEQRES 6 A 129 LYS GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN SEQRES 7 A 129 THR VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP SEQRES 8 A 129 THR ALA VAL TYR TYR CYS ALA SER ALA ALA SER SER ALA SEQRES 9 A 129 ALA TYR SER GLY ALA TYR TYR TYR THR SER TYR TYR ASP SEQRES 10 A 129 TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 1 B 153 GLY SER HIS PRO ALA GLY ILE ILE LEU THR ARG ASP SER SEQRES 2 B 153 TYR TYR THR ILE PRO SER MET GLU GLU LEU ALA ARG SER SEQRES 3 B 153 VAL ASP GLU ASN GLY GLU CYS ILE VAL ASN GLY PHE THR SEQRES 4 B 153 ILE GLY ARG GLU GLY PHE GLY SER ILE TYR PHE GLU GLY SEQRES 5 B 153 ILE VAL ASN LEU THR ASN LEU ASP LEU ASP SER ILE VAL SEQRES 6 B 153 HIS ILE ARG ARG LYS GLU VAL ILE VAL TYR VAL ASP ASP SEQRES 7 B 153 GLN ASN LYS PRO PRO LEU GLY GLU GLY LEU ASN ARG PRO SEQRES 8 B 153 ALA GLN VAL THR LEU ASP GLU VAL TRP PRO ILE ASP LYS SEQRES 9 B 153 THR SER ARG CYS MET ILE THR SER PRO GLU ARG LEU SER SEQRES 10 B 153 GLU MET ASN TYR LYS SER LYS LEU GLU ASN ALA SER ARG SEQRES 11 B 153 LYS GLN GLY ALA GLN PHE VAL ASP TYR ARG PRO GLU SER SEQRES 12 B 153 GLY SER TRP VAL PHE LYS VAL ASN HIS PHE SEQRES 1 C 129 GLY GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL SEQRES 2 C 129 GLN ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 C 129 GLY ARG THR PHE SER THR TYR ALA MET GLY TRP PHE ARG SEQRES 4 C 129 GLN ALA PRO GLY LYS GLU ARG GLU PHE VAL SER ALA CYS SEQRES 5 C 129 SER TRP SER GLY GLY ILE THR ARG TYR ALA ASP SER VAL SEQRES 6 C 129 LYS GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN SEQRES 7 C 129 THR VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP SEQRES 8 C 129 THR ALA VAL TYR TYR CYS ALA SER ALA ALA SER SER ALA SEQRES 9 C 129 ALA TYR SER GLY ALA TYR TYR TYR THR SER TYR TYR ASP SEQRES 10 C 129 TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 1 D 153 GLY SER HIS PRO ALA GLY ILE ILE LEU THR ARG ASP SER SEQRES 2 D 153 TYR TYR THR ILE PRO SER MET GLU GLU LEU ALA ARG SER SEQRES 3 D 153 VAL ASP GLU ASN GLY GLU CYS ILE VAL ASN GLY PHE THR SEQRES 4 D 153 ILE GLY ARG GLU GLY PHE GLY SER ILE TYR PHE GLU GLY SEQRES 5 D 153 ILE VAL ASN LEU THR ASN LEU ASP LEU ASP SER ILE VAL SEQRES 6 D 153 HIS ILE ARG ARG LYS GLU VAL ILE VAL TYR VAL ASP ASP SEQRES 7 D 153 GLN ASN LYS PRO PRO LEU GLY GLU GLY LEU ASN ARG PRO SEQRES 8 D 153 ALA GLN VAL THR LEU ASP GLU VAL TRP PRO ILE ASP LYS SEQRES 9 D 153 THR SER ARG CYS MET ILE THR SER PRO GLU ARG LEU SER SEQRES 10 D 153 GLU MET ASN TYR LYS SER LYS LEU GLU ASN ALA SER ARG SEQRES 11 D 153 LYS GLN GLY ALA GLN PHE VAL ASP TYR ARG PRO GLU SER SEQRES 12 D 153 GLY SER TRP VAL PHE LYS VAL ASN HIS PHE HET NA B 901 1 HET SO4 B 902 5 HET SO4 C 201 5 HET NA D 901 1 HET SO4 D 902 5 HETNAM NA SODIUM ION HETNAM SO4 SULFATE ION FORMUL 5 NA 2(NA 1+) FORMUL 6 SO4 3(O4 S 2-) FORMUL 10 HOH *398(H2 O) HELIX 1 AA1 THR A 29 THR A 32 5 4 HELIX 2 AA2 LYS A 88 THR A 92 5 5 HELIX 3 AA3 GLY A 108 TYR A 116 5 9 HELIX 4 AA4 SER B 732 ALA B 737 1 6 HELIX 5 AA5 ASP B 773 ILE B 777 1 5 HELIX 6 AA6 ASP B 790 LYS B 794 5 5 HELIX 7 AA7 SER B 825 MET B 832 1 8 HELIX 8 AA8 ASN B 833 GLN B 845 1 13 HELIX 9 AA9 ASP C 63 LYS C 66 5 4 HELIX 10 AB1 ASN C 75 LYS C 77 5 3 HELIX 11 AB2 LYS C 88 THR C 92 5 5 HELIX 12 AB3 GLY C 108 TYR C 116 5 9 HELIX 13 AB4 SER D 732 ARG D 738 1 7 HELIX 14 AB5 ASP D 773 ILE D 777 1 5 HELIX 15 AB6 ASP D 790 LYS D 794 5 5 HELIX 16 AB7 SER D 825 MET D 832 1 8 HELIX 17 AB8 ASN D 833 GLN D 845 1 13 SHEET 1 AA1 4 VAL A 3 SER A 8 0 SHEET 2 AA1 4 LEU A 19 GLY A 27 -1 O SER A 22 N SER A 8 SHEET 3 AA1 4 THR A 79 MET A 84 -1 O MET A 84 N LEU A 19 SHEET 4 AA1 4 PHE A 69 ASP A 74 -1 N THR A 70 O GLN A 83 SHEET 1 AA2 6 GLY A 11 GLN A 14 0 SHEET 2 AA2 6 THR A 123 SER A 128 1 O THR A 126 N VAL A 13 SHEET 3 AA2 6 ALA A 93 ALA A 100 -1 N TYR A 95 O THR A 123 SHEET 4 AA2 6 ALA A 34 GLN A 40 -1 N PHE A 38 O TYR A 96 SHEET 5 AA2 6 GLU A 47 SER A 53 -1 O GLU A 47 N ARG A 39 SHEET 6 AA2 6 THR A 59 TYR A 61 -1 O ARG A 60 N ALA A 51 SHEET 1 AA3 4 GLY A 11 GLN A 14 0 SHEET 2 AA3 4 THR A 123 SER A 128 1 O THR A 126 N VAL A 13 SHEET 3 AA3 4 ALA A 93 ALA A 100 -1 N TYR A 95 O THR A 123 SHEET 4 AA3 4 TYR A 118 TRP A 119 -1 O TYR A 118 N SER A 99 SHEET 1 AA4 6 TYR B 727 ILE B 730 0 SHEET 2 AA4 6 ILE B 747 ARG B 755 -1 O THR B 752 N ILE B 730 SHEET 3 AA4 6 GLY B 759 ASN B 768 -1 O PHE B 763 N PHE B 751 SHEET 4 AA4 6 ALA B 805 LEU B 809 -1 O THR B 808 N SER B 760 SHEET 5 AA4 6 SER B 858 VAL B 863 -1 O TRP B 859 N LEU B 809 SHEET 6 AA4 6 GLN B 848 ARG B 853 -1 N GLN B 848 O LYS B 862 SHEET 1 AA5 2 VAL B 778 ARG B 781 0 SHEET 2 AA5 2 GLU B 784 VAL B 787 -1 O GLU B 784 N ARG B 781 SHEET 1 AA6 2 ILE B 815 ASP B 816 0 SHEET 2 AA6 2 CYS B 821 MET B 822 -1 O CYS B 821 N ASP B 816 SHEET 1 AA7 4 GLN C 4 SER C 8 0 SHEET 2 AA7 4 LEU C 19 SER C 26 -1 O SER C 22 N SER C 8 SHEET 3 AA7 4 THR C 79 MET C 84 -1 O MET C 84 N LEU C 19 SHEET 4 AA7 4 PHE C 69 ASP C 74 -1 N SER C 72 O TYR C 81 SHEET 1 AA8 6 LEU C 12 GLN C 14 0 SHEET 2 AA8 6 THR C 123 SER C 128 1 O SER C 128 N VAL C 13 SHEET 3 AA8 6 ALA C 93 ALA C 100 -1 N ALA C 93 O VAL C 125 SHEET 4 AA8 6 ALA C 34 GLN C 40 -1 N PHE C 38 O TYR C 96 SHEET 5 AA8 6 GLU C 47 SER C 53 -1 O SER C 50 N TRP C 37 SHEET 6 AA8 6 THR C 59 TYR C 61 -1 O ARG C 60 N ALA C 51 SHEET 1 AA9 4 LEU C 12 GLN C 14 0 SHEET 2 AA9 4 THR C 123 SER C 128 1 O SER C 128 N VAL C 13 SHEET 3 AA9 4 ALA C 93 ALA C 100 -1 N ALA C 93 O VAL C 125 SHEET 4 AA9 4 TYR C 118 TRP C 119 -1 O TYR C 118 N SER C 99 SHEET 1 AB1 6 TYR D 727 ILE D 730 0 SHEET 2 AB1 6 ILE D 747 ARG D 755 -1 O THR D 752 N ILE D 730 SHEET 3 AB1 6 GLY D 759 ASN D 768 -1 O PHE D 763 N PHE D 751 SHEET 4 AB1 6 ALA D 805 LEU D 809 -1 O THR D 808 N SER D 760 SHEET 5 AB1 6 SER D 858 VAL D 863 -1 O TRP D 859 N LEU D 809 SHEET 6 AB1 6 GLN D 848 ARG D 853 -1 N GLN D 848 O LYS D 862 SHEET 1 AB2 2 VAL D 778 ARG D 781 0 SHEET 2 AB2 2 GLU D 784 VAL D 787 -1 O GLU D 784 N ARG D 781 SSBOND 1 CYS B 821 CYS D 821 1555 3545 2.05 LINK O GLN B 806 NA NA B 901 1555 1555 2.82 LINK OG1 THR B 808 NA NA B 901 1555 1555 2.80 LINK NA NA B 901 O HOH B1018 1555 1555 2.56 LINK O HOH C 323 NA NA D 901 2556 1555 3.12 LINK O HOH C 329 NA NA D 901 2556 1555 3.11 LINK O HOH C 360 NA NA D 901 2556 1555 2.69 LINK O ARG D 843 NA NA D 901 1555 1555 2.75 LINK O ALA D 847 NA NA D 901 1555 1555 3.00 CISPEP 1 ILE B 730 PRO B 731 0 -3.99 CISPEP 2 ILE D 730 PRO D 731 0 -1.85 CRYST1 113.800 149.810 85.090 90.00 133.09 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008787 0.000000 0.008220 0.00000 SCALE2 0.000000 0.006675 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016093 0.00000