HEADER TRANSFERASE 01-MAR-21 7NQD TITLE PRIM-POL DOMAIN OF CRISPR-ASSOCIATED PRIM-POL (CAPP) FROM MARINITOGA TITLE 2 SP. 1137 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TPR_REGION DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MARINITOGA SP. 1137; SOURCE 3 ORGANISM_TAXID: 1545835; SOURCE 4 STRAIN: DSM 14283 / JCM 11233 / KA3; SOURCE 5 GENE: MARPI_0402; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS AEP ARCHAEO-EUKARYOTIC PRIMASE APO PRIM-POL PRIMASE-POLYMERASE KEYWDS 2 PRIMASE POLYMERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.W.H.LI,A.J.DOHERTY REVDAT 4 08-JUN-22 7NQD 1 JRNL REVDAT 3 25-MAY-22 7NQD 1 TITLE SOURCE SEQADV REVDAT 2 18-MAY-22 7NQD 1 JRNL REVDAT 1 04-MAY-22 7NQD 0 JRNL AUTH A.W.H.LI,K.ZABRADY,L.J.BAINBRIDGE,M.ZABRADY,S.NASEEM-KHAN, JRNL AUTH 2 M.B.BERGER,P.KOLESAR,G.A.CISNEROS,A.J.DOHERTY JRNL TITL MOLECULAR BASIS FOR THE INITIATION OF DNA PRIMER SYNTHESIS. JRNL REF NATURE V. 605 767 2022 JRNL REFN ESSN 1476-4687 JRNL PMID 35508653 JRNL DOI 10.1038/S41586-022-04695-0 REMARK 2 REMARK 2 RESOLUTION. 2.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 12162 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 604 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.7900 - 4.7100 1.00 2952 125 0.1909 0.1857 REMARK 3 2 4.7100 - 3.7400 1.00 2878 158 0.2036 0.2389 REMARK 3 3 3.7400 - 3.2700 1.00 2866 162 0.2526 0.2927 REMARK 3 4 3.2700 - 2.9700 1.00 2862 159 0.3001 0.3401 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.205 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 79.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 73.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3428 REMARK 3 ANGLE : 0.620 4625 REMARK 3 CHIRALITY : 0.047 508 REMARK 3 PLANARITY : 0.004 600 REMARK 3 DIHEDRAL : 15.284 1244 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.0115 26.8773 8.8943 REMARK 3 T TENSOR REMARK 3 T11: 0.5084 T22: 0.5326 REMARK 3 T33: 0.5673 T12: 0.0067 REMARK 3 T13: -0.0041 T23: 0.0129 REMARK 3 L TENSOR REMARK 3 L11: 0.7453 L22: 0.7161 REMARK 3 L33: 1.2373 L12: 0.6682 REMARK 3 L13: 0.5619 L23: 0.2017 REMARK 3 S TENSOR REMARK 3 S11: -0.0532 S12: -0.2368 S13: 0.4026 REMARK 3 S21: 0.0564 S22: -0.1392 S23: -0.3342 REMARK 3 S31: -0.0293 S32: -0.4259 S33: -0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 173 THROUGH 250 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6712 5.5278 8.5749 REMARK 3 T TENSOR REMARK 3 T11: 0.5755 T22: 0.5644 REMARK 3 T33: 0.5342 T12: 0.0043 REMARK 3 T13: 0.0095 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 0.9287 L22: 0.8560 REMARK 3 L33: 0.2883 L12: 0.2594 REMARK 3 L13: 0.6602 L23: -0.3100 REMARK 3 S TENSOR REMARK 3 S11: -0.1826 S12: -0.1366 S13: -0.4096 REMARK 3 S21: -0.1164 S22: 0.1281 S23: 0.0690 REMARK 3 S31: 0.0280 S32: 0.0975 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 251 THROUGH 328 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.1888 10.5413 9.8974 REMARK 3 T TENSOR REMARK 3 T11: 0.6099 T22: 0.5502 REMARK 3 T33: 0.5339 T12: -0.0472 REMARK 3 T13: 0.0354 T23: 0.0168 REMARK 3 L TENSOR REMARK 3 L11: 0.7817 L22: 2.2503 REMARK 3 L33: 0.9746 L12: -0.7332 REMARK 3 L13: 0.2627 L23: 0.1618 REMARK 3 S TENSOR REMARK 3 S11: -0.0099 S12: 0.0124 S13: 0.0303 REMARK 3 S21: -0.1611 S22: 0.0300 S23: -0.1827 REMARK 3 S31: 0.0350 S32: 0.0634 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 113 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.0474 6.1749 -30.5387 REMARK 3 T TENSOR REMARK 3 T11: 0.6879 T22: 0.7094 REMARK 3 T33: 0.8664 T12: 0.1157 REMARK 3 T13: 0.1317 T23: -0.0884 REMARK 3 L TENSOR REMARK 3 L11: 0.0424 L22: 0.0205 REMARK 3 L33: 0.0674 L12: -0.1709 REMARK 3 L13: 0.0820 L23: 0.0035 REMARK 3 S TENSOR REMARK 3 S11: -0.7188 S12: -0.1321 S13: -1.4056 REMARK 3 S21: 0.7994 S22: 0.1255 S23: 0.5752 REMARK 3 S31: 0.5090 S32: 0.5926 S33: -0.0890 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 130 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4966 14.6065 -28.3349 REMARK 3 T TENSOR REMARK 3 T11: 0.5656 T22: 0.7749 REMARK 3 T33: 0.6342 T12: 0.0369 REMARK 3 T13: 0.0462 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 0.7487 L22: 0.6188 REMARK 3 L33: 0.3583 L12: 0.1608 REMARK 3 L13: -0.2198 L23: 0.3897 REMARK 3 S TENSOR REMARK 3 S11: 0.0012 S12: 0.0381 S13: -0.0566 REMARK 3 S21: -0.1844 S22: -0.0015 S23: 0.3743 REMARK 3 S31: 0.0090 S32: -0.2864 S33: -0.0044 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 173 THROUGH 250 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.2603 18.8294 -25.0482 REMARK 3 T TENSOR REMARK 3 T11: 0.5632 T22: 0.5820 REMARK 3 T33: 0.7962 T12: 0.0242 REMARK 3 T13: 0.1079 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.4266 L22: 1.0380 REMARK 3 L33: 0.5826 L12: 0.0936 REMARK 3 L13: -0.1819 L23: 0.6314 REMARK 3 S TENSOR REMARK 3 S11: 0.1153 S12: 0.1411 S13: 0.2362 REMARK 3 S21: -0.2653 S22: -0.3584 S23: -0.2803 REMARK 3 S31: 0.1718 S32: 0.1535 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 251 THROUGH 262 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.3197 26.1324 -21.5596 REMARK 3 T TENSOR REMARK 3 T11: 0.5684 T22: 0.5326 REMARK 3 T33: 1.3039 T12: -0.0347 REMARK 3 T13: 0.0538 T23: -0.1224 REMARK 3 L TENSOR REMARK 3 L11: -0.0148 L22: 0.0139 REMARK 3 L33: 0.1641 L12: 0.0321 REMARK 3 L13: -0.0023 L23: -0.0118 REMARK 3 S TENSOR REMARK 3 S11: -0.1622 S12: 0.1049 S13: 0.3245 REMARK 3 S21: 0.1361 S22: -0.1487 S23: -1.2650 REMARK 3 S31: -0.5154 S32: 0.0680 S33: -0.0002 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 263 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.6775 18.5663 -30.3590 REMARK 3 T TENSOR REMARK 3 T11: 0.5943 T22: 0.7078 REMARK 3 T33: 0.6123 T12: 0.1073 REMARK 3 T13: 0.1260 T23: 0.0419 REMARK 3 L TENSOR REMARK 3 L11: 0.7584 L22: 1.4937 REMARK 3 L33: 0.3389 L12: 0.6310 REMARK 3 L13: 0.5327 L23: 0.3728 REMARK 3 S TENSOR REMARK 3 S11: -0.1006 S12: -0.3371 S13: 0.4390 REMARK 3 S21: -0.0926 S22: -0.1542 S23: -0.2396 REMARK 3 S31: 0.1391 S32: 0.5805 S33: -0.0002 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 303 THROUGH 330 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.6424 5.8372 -22.0696 REMARK 3 T TENSOR REMARK 3 T11: 0.7185 T22: 0.7164 REMARK 3 T33: 0.6929 T12: 0.0662 REMARK 3 T13: 0.1223 T23: -0.0611 REMARK 3 L TENSOR REMARK 3 L11: 0.3877 L22: 0.2489 REMARK 3 L33: 0.0653 L12: -0.2253 REMARK 3 L13: 0.1454 L23: 0.0324 REMARK 3 S TENSOR REMARK 3 S11: 0.0112 S12: 0.1515 S13: -0.3432 REMARK 3 S21: 0.1079 S22: -0.2573 S23: -0.2959 REMARK 3 S31: 0.3886 S32: 0.8640 S33: 0.0005 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 113 through 115 or REMARK 3 (resid 116 through 117 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 118 through 134 or (resid 135 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 136 through 146 REMARK 3 or (resid 147 and (name N or name CA or REMARK 3 name C or name O or name CB )) or resid REMARK 3 148 through 180 or (resid 181 through 182 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 188 through 194 REMARK 3 or (resid 195 and (name N or name CA or REMARK 3 name C or name O or name CB )) or resid REMARK 3 196 through 198 or (resid 199 and (name N REMARK 3 or name CA or name C or name O or name CB REMARK 3 )) or resid 200 through 201 or (resid 202 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 203 through 254 REMARK 3 or (resid 255 and (name N or name CA or REMARK 3 name C or name O or name CB )) or resid REMARK 3 256 through 263 or (resid 264 and (name N REMARK 3 or name CA or name C or name O or name CB REMARK 3 )) or resid 265 through 276 or (resid 277 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 278 through 328)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and ((resid 113 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 114 through 116 or (resid 117 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 118 through 182 REMARK 3 or (resid 188 through 190 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 191 through 221 or (resid 222 REMARK 3 through 223 and (name N or name CA or REMARK 3 name C or name O or name CB )) or resid REMARK 3 224 through 267 or (resid 268 through 269 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 270 through 282 REMARK 3 or resid 289 through 328)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7NQD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1292114365. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12181 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.970 REMARK 200 RESOLUTION RANGE LOW (A) : 45.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.750 REMARK 200 R MERGE (I) : 0.21900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 1.75200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M PCTP 25% PEG 1500, PH 4.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.69333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.34667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 54.52000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 18.17333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 90.86667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 109 REMARK 465 ALA A 110 REMARK 465 PRO A 111 REMARK 465 SER A 112 REMARK 465 HIS A 183 REMARK 465 TYR A 184 REMARK 465 LEU A 185 REMARK 465 HIS A 283 REMARK 465 LYS A 284 REMARK 465 LYS A 285 REMARK 465 THR A 286 REMARK 465 GLY A 287 REMARK 465 LYS A 288 REMARK 465 ASN A 329 REMARK 465 ASP A 330 REMARK 465 LYS B 109 REMARK 465 ALA B 110 REMARK 465 PRO B 111 REMARK 465 SER B 112 REMARK 465 HIS B 183 REMARK 465 TYR B 184 REMARK 465 LEU B 185 REMARK 465 ASN B 186 REMARK 465 ARG B 187 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 113 CG CD OE1 NE2 REMARK 470 LYS A 117 CG CD CE NZ REMARK 470 LYS A 157 CG CD CE NZ REMARK 470 LYS A 182 CG CD CE NZ REMARK 470 ASN A 186 CG OD1 ND2 REMARK 470 ARG A 187 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 188 CG CD OE1 OE2 REMARK 470 ASP A 189 CG OD1 OD2 REMARK 470 LYS A 190 CG CD CE NZ REMARK 470 ASN A 222 CG OD1 ND2 REMARK 470 ARG A 223 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 268 CG CD1 CD2 REMARK 470 ASN A 269 CG OD1 ND2 REMARK 470 LYS A 289 CG CD CE NZ REMARK 470 GLU A 301 CG CD OE1 OE2 REMARK 470 LYS A 320 CG CD CE NZ REMARK 470 GLU A 328 CG CD OE1 OE2 REMARK 470 ILE B 116 CG1 CG2 CD1 REMARK 470 GLU B 135 CG CD OE1 OE2 REMARK 470 PHE B 147 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 157 CG CD CE NZ REMARK 470 LYS B 181 CG CD CE NZ REMARK 470 LYS B 182 CG CD CE NZ REMARK 470 LYS B 190 CG CD CE NZ REMARK 470 GLU B 195 CG CD OE1 OE2 REMARK 470 LYS B 199 CG CD CE NZ REMARK 470 LYS B 202 CG CD CE NZ REMARK 470 GLU B 255 CG CD OE1 OE2 REMARK 470 LYS B 264 CG CD CE NZ REMARK 470 LYS B 277 CG CD CE NZ REMARK 470 LYS B 285 CG CD CE NZ REMARK 470 LYS B 288 CG CD CE NZ REMARK 470 LYS B 289 CG CD CE NZ REMARK 470 GLU B 301 CG CD OE1 OE2 REMARK 470 LYS B 320 CG CD CE NZ REMARK 470 GLU B 328 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG A 142 OD1 ASN A 212 6554 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 123 58.78 -99.58 REMARK 500 PHE A 130 -164.96 -129.28 REMARK 500 ASN A 222 -9.88 -59.20 REMARK 500 PHE B 123 58.66 -98.98 REMARK 500 PHE B 130 -164.81 -126.93 REMARK 500 ASP B 189 75.36 -106.97 REMARK 500 ASN B 302 70.75 53.54 REMARK 500 REMARK 500 REMARK: NULL DBREF 7NQD A 109 330 UNP H2J4R1 H2J4R1_MARPK 109 330 DBREF 7NQD B 109 330 UNP H2J4R1 H2J4R1_MARPK 109 330 SEQADV 7NQD GLN A 148 UNP H2J4R1 HIS 148 VARIANT SEQADV 7NQD ASN A 152 UNP H2J4R1 ASP 152 VARIANT SEQADV 7NQD THR A 214 UNP H2J4R1 ILE 214 VARIANT SEQADV 7NQD ASN A 319 UNP H2J4R1 ASP 319 VARIANT SEQADV 7NQD GLN B 148 UNP H2J4R1 HIS 148 VARIANT SEQADV 7NQD ASN B 152 UNP H2J4R1 ASP 152 VARIANT SEQADV 7NQD THR B 214 UNP H2J4R1 ILE 214 VARIANT SEQADV 7NQD ASN B 319 UNP H2J4R1 ASP 319 VARIANT SEQRES 1 A 222 LYS ALA PRO SER GLN ASN ALA ILE LYS ARG PHE MET THR SEQRES 2 A 222 LEU PHE SER GLY ARG GLU ASP VAL PHE SER ILE GLN TYR SEQRES 3 A 222 GLU GLY GLY TYR ARG PRO ILE ARG ARG PRO LEU ASN PHE SEQRES 4 A 222 GLN ASP ILE LYS ASN HIS PHE SER GLY LYS LYS THR LEU SEQRES 5 A 222 GLY ILE TYR LEU LEU LYS LYS ASN ASP THR VAL LYS PHE SEQRES 6 A 222 ALA ALA TYR ASP ILE ASP ILE LYS LYS HIS TYR LEU ASN SEQRES 7 A 222 ARG GLU ASP LYS PHE VAL TYR GLU GLU ASN SER LYS LYS SEQRES 8 A 222 VAL ALA LYS ARG LEU SER ARG GLU LEU ASN LEU GLU ASN SEQRES 9 A 222 ILE THR HIS TYR PHE GLU PHE THR GLY ASN ARG GLY TYR SEQRES 10 A 222 HIS ILE TRP ILE PHE PHE ASP ILE PRO VAL SER ALA TYR SEQRES 11 A 222 LYS ILE LYS TYR ILE MET GLU LYS ILE LEU ASP ARG ILE SEQRES 12 A 222 GLU LEU GLU GLU GLY ILE ASP VAL GLU ILE PHE PRO LYS SEQRES 13 A 222 GLN THR SER LEU ASN GLY GLY LEU GLY ASN LEU ILE LYS SEQRES 14 A 222 VAL PRO LEU GLY VAL HIS LYS LYS THR GLY LYS LYS CYS SEQRES 15 A 222 LEU PHE VAL ASP ASN ASP PHE ASN VAL ILE GLU ASN GLN SEQRES 16 A 222 ILE GLU PHE LEU ASN ASN ILE LYS GLU ASN LYS ALA THR SEQRES 17 A 222 GLU ILE ASN LYS LEU PHE ARG GLU ILE PHE ASN GLU ASN SEQRES 18 A 222 ASP SEQRES 1 B 222 LYS ALA PRO SER GLN ASN ALA ILE LYS ARG PHE MET THR SEQRES 2 B 222 LEU PHE SER GLY ARG GLU ASP VAL PHE SER ILE GLN TYR SEQRES 3 B 222 GLU GLY GLY TYR ARG PRO ILE ARG ARG PRO LEU ASN PHE SEQRES 4 B 222 GLN ASP ILE LYS ASN HIS PHE SER GLY LYS LYS THR LEU SEQRES 5 B 222 GLY ILE TYR LEU LEU LYS LYS ASN ASP THR VAL LYS PHE SEQRES 6 B 222 ALA ALA TYR ASP ILE ASP ILE LYS LYS HIS TYR LEU ASN SEQRES 7 B 222 ARG GLU ASP LYS PHE VAL TYR GLU GLU ASN SER LYS LYS SEQRES 8 B 222 VAL ALA LYS ARG LEU SER ARG GLU LEU ASN LEU GLU ASN SEQRES 9 B 222 ILE THR HIS TYR PHE GLU PHE THR GLY ASN ARG GLY TYR SEQRES 10 B 222 HIS ILE TRP ILE PHE PHE ASP ILE PRO VAL SER ALA TYR SEQRES 11 B 222 LYS ILE LYS TYR ILE MET GLU LYS ILE LEU ASP ARG ILE SEQRES 12 B 222 GLU LEU GLU GLU GLY ILE ASP VAL GLU ILE PHE PRO LYS SEQRES 13 B 222 GLN THR SER LEU ASN GLY GLY LEU GLY ASN LEU ILE LYS SEQRES 14 B 222 VAL PRO LEU GLY VAL HIS LYS LYS THR GLY LYS LYS CYS SEQRES 15 B 222 LEU PHE VAL ASP ASN ASP PHE ASN VAL ILE GLU ASN GLN SEQRES 16 B 222 ILE GLU PHE LEU ASN ASN ILE LYS GLU ASN LYS ALA THR SEQRES 17 B 222 GLU ILE ASN LYS LEU PHE ARG GLU ILE PHE ASN GLU ASN SEQRES 18 B 222 ASP HELIX 1 AA1 GLN A 113 PHE A 123 1 11 HELIX 2 AA2 ASN A 146 GLY A 156 1 11 HELIX 3 AA3 LYS A 190 GLU A 211 1 22 HELIX 4 AA4 ALA A 237 ILE A 251 1 15 HELIX 5 AA5 ASN A 302 ILE A 310 1 9 HELIX 6 AA6 LYS A 314 GLU A 328 1 15 HELIX 7 AA7 ASN B 114 PHE B 123 1 10 HELIX 8 AA8 ASN B 146 SER B 155 1 10 HELIX 9 AA9 LYS B 190 GLU B 211 1 22 HELIX 10 AB1 ALA B 237 ILE B 251 1 15 HELIX 11 AB2 ASN B 302 ASN B 309 1 8 HELIX 12 AB3 LYS B 314 ASN B 329 1 16 SHEET 1 AA1 4 GLY A 137 ILE A 141 0 SHEET 2 AA1 4 PHE A 130 TYR A 134 -1 N ILE A 132 O ARG A 139 SHEET 3 AA1 4 LEU A 160 TYR A 163 -1 O GLY A 161 N SER A 131 SHEET 4 AA1 4 LEU A 275 LYS A 277 -1 O ILE A 276 N ILE A 162 SHEET 1 AA2 5 ILE A 257 PHE A 262 0 SHEET 2 AA2 5 THR A 170 ILE A 180 -1 N ALA A 175 O PHE A 262 SHEET 3 AA2 5 GLY A 224 SER A 236 -1 O ILE A 229 N ALA A 174 SHEET 4 AA2 5 HIS A 215 PHE A 219 -1 N TYR A 216 O TRP A 228 SHEET 5 AA2 5 PHE A 292 VAL A 293 -1 O VAL A 293 N PHE A 217 SHEET 1 AA3 4 GLY B 137 ILE B 141 0 SHEET 2 AA3 4 PHE B 130 TYR B 134 -1 N TYR B 134 O GLY B 137 SHEET 3 AA3 4 LEU B 160 TYR B 163 -1 O GLY B 161 N SER B 131 SHEET 4 AA3 4 LEU B 275 LYS B 277 -1 O ILE B 276 N ILE B 162 SHEET 1 AA4 5 ILE B 257 PHE B 262 0 SHEET 2 AA4 5 THR B 170 ILE B 180 -1 N ASP B 179 O ASP B 258 SHEET 3 AA4 5 GLY B 224 SER B 236 -1 O VAL B 235 N VAL B 171 SHEET 4 AA4 5 HIS B 215 PHE B 219 -1 N TYR B 216 O TRP B 228 SHEET 5 AA4 5 LEU B 291 VAL B 293 -1 O LEU B 291 N PHE B 219 CISPEP 1 PHE A 262 PRO A 263 0 7.73 CISPEP 2 PHE B 262 PRO B 263 0 6.47 CRYST1 97.380 97.380 109.040 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010269 0.005929 0.000000 0.00000 SCALE2 0.000000 0.011858 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009171 0.00000 MTRIX1 1 0.161213 -0.949906 0.267748 40.70324 1 MTRIX2 1 -0.904488 -0.250749 -0.345001 44.83869 1 MTRIX3 1 0.394857 -0.186557 -0.899603 -25.75511 1