HEADER OXIDOREDUCTASE 10-MAR-21 7NTM TITLE CRYO-EM STRUCTURE OF S.CEREVISIAE NATIVE ALCOHOL DEHYDROGENASE 1 TITLE 2 (ADH1) IN ITS TETRAMERIC APO STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALCOHOL DEHYDROGENASE 1; COMPND 3 CHAIN: A, B, D, C; COMPND 4 SYNONYM: ALCOHOL DEHYDROGENASE I,YADH-1; COMPND 5 EC: 1.1.1.1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE S288C; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292 KEYWDS ADH1, TETRAMER, S.CEREVISIAE, OXIDOREDUCTASE EXPDTA ELECTRON MICROSCOPY AUTHOR J.A.NZIGOU MANDOUCKOU,M.CARRONI,J.Z.HAEGGSTROM,M.THULASINGAM REVDAT 1 12-OCT-22 7NTM 0 JRNL AUTH J.A.NZIGOU MANDOUCKOU,M.CARRONI,J.Z.HAEGGSTROM,M.THULASINGAM JRNL TITL CRYO-EM STRUCTURE OF S.CEREVISIAE NATIVE ALCOHOL JRNL TITL 2 DEHYDROGENASE 1 (ADH1) IN ITS TETRAMERIC APO STATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : WARP, EPU, WARP, MOLREP, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC, MOLREP, REFMAC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 5ENV REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : BACKBONE TRACE REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : 123.000 REMARK 3 REMARK 3 FITTING PROCEDURE : MODEL BUILDING AND REFINEMENT WERE DONE USING REMARK 3 USING CCP-EM SOFTWARE SUITE (BURNLEY ET AL, 2017). THE X-RAY REMARK 3 STRUCTURE OF YEAST ADH1 (PDB: 5ENV) WAS USED AS A STARTING MODEL REMARK 3 FOR MODEL BUILDING. THIS MODEL WAS DOCKED INTO OUR CRYO-EM MAP REMARK 3 USING MOLREP (BROWN ET AL, 2014). THE RESULTING STARTING MODEL REMARK 3 WAS MANUALLY ADJUSTED IN COOT (EMSLEY ET AL, 2010). REFMAC 5 REMARK 3 (BROWN ET AL, 2014) USED FOR STRUCTURE MODEL REFINEMENT. REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.860 REMARK 3 NUMBER OF PARTICLES : 222802 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7NTM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1292114565. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : TETRAMERIC STRUCTURE OF NATIVE REMARK 245 ADH1 FROM S. CEREVICIAE IN ITS REMARK 245 APO STATE. REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 2.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : STABLE HOMOTETRAMER, COMPOSED REMARK 245 OF FOUR MONOMERS LABELLED AS A, B, C AND D. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 14964 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 130000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 53160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -284.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS C 103 ZN ZN C 402 1.38 REMARK 500 SG CYS D 97 ZN ZN D 402 1.65 REMARK 500 OE1 GLU D 108 NE2 GLN D 135 1.96 REMARK 500 OE2 GLU B 108 NE2 GLN B 135 1.97 REMARK 500 O LEU B 232 O ASP B 236 1.99 REMARK 500 O SER C 176 CG2 VAL C 245 2.03 REMARK 500 O SER D 176 CG2 VAL D 245 2.04 REMARK 500 O SER B 176 CG2 VAL B 245 2.04 REMARK 500 OD1 ASP B 220 OG1 THR B 222 2.14 REMARK 500 OD1 ASP C 220 OG1 THR C 222 2.15 REMARK 500 OG SER C 315 NE ARG C 340 2.15 REMARK 500 O ILE A 252 OG SER A 255 2.16 REMARK 500 CD2 LEU D 232 O GLY D 237 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET C 98 C ALA C 99 N 0.146 REMARK 500 TYR C 102 C CYS C 103 N 0.216 REMARK 500 CYS C 103 C GLU C 104 N 0.171 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS D 97 CA - C - N ANGL. DEV. = -22.2 DEGREES REMARK 500 CYS D 97 O - C - N ANGL. DEV. = 23.8 DEGREES REMARK 500 MET D 98 C - N - CA ANGL. DEV. = -19.8 DEGREES REMARK 500 CYS D 100 N - CA - CB ANGL. DEV. = 9.1 DEGREES REMARK 500 GLU D 101 CB - CA - C ANGL. DEV. = -13.9 DEGREES REMARK 500 MET C 98 CA - C - N ANGL. DEV. = -15.8 DEGREES REMARK 500 MET C 98 O - C - N ANGL. DEV. = 16.7 DEGREES REMARK 500 ALA C 99 C - N - CA ANGL. DEV. = -16.2 DEGREES REMARK 500 TYR C 102 CB - CA - C ANGL. DEV. = 22.0 DEGREES REMARK 500 CYS C 103 CB - CA - C ANGL. DEV. = 8.5 DEGREES REMARK 500 CYS C 103 N - CA - CB ANGL. DEV. = -12.1 DEGREES REMARK 500 CYS C 103 O - C - N ANGL. DEV. = 10.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 78 -12.92 -141.40 REMARK 500 LYS A 80 -68.98 -97.92 REMARK 500 ASN A 94 34.48 -95.97 REMARK 500 ALA A 99 23.54 -155.95 REMARK 500 HIS A 113 74.66 -112.45 REMARK 500 TYR A 119 -61.90 -140.32 REMARK 500 CYS A 153 -70.91 -132.92 REMARK 500 ASN A 166 61.59 66.32 REMARK 500 GLU A 216 -75.30 -90.12 REMARK 500 TYR A 294 -153.92 -114.92 REMARK 500 GLN A 336 -36.98 -131.85 REMARK 500 ALA B 99 79.41 -160.12 REMARK 500 CYS B 100 -168.31 -172.62 REMARK 500 HIS B 113 72.55 -109.78 REMARK 500 TYR B 119 -59.43 -129.56 REMARK 500 CYS B 153 -72.47 -132.79 REMARK 500 THR B 235 48.22 -79.31 REMARK 500 ASP B 236 -127.37 46.19 REMARK 500 TYR B 294 -154.49 -113.87 REMARK 500 ASN D 78 -13.94 -140.34 REMARK 500 ALA D 99 54.51 -156.20 REMARK 500 HIS D 113 74.02 -108.89 REMARK 500 TYR D 119 -61.44 -128.63 REMARK 500 CYS D 153 -72.51 -132.93 REMARK 500 GLU D 216 -71.97 -93.31 REMARK 500 ASP D 236 51.43 -97.15 REMARK 500 CYS D 276 62.95 -103.19 REMARK 500 CYS D 277 99.51 -67.92 REMARK 500 TYR D 294 -157.20 -116.35 REMARK 500 HIS C 15 30.35 73.56 REMARK 500 MET C 98 48.39 -82.29 REMARK 500 ASN C 110 53.17 -103.76 REMARK 500 HIS C 113 65.68 -112.90 REMARK 500 TYR C 119 -57.51 -129.25 REMARK 500 PHE C 125 39.20 -85.25 REMARK 500 CYS C 153 -72.50 -132.78 REMARK 500 ASP C 236 39.93 37.94 REMARK 500 CYS C 276 43.47 -90.70 REMARK 500 TYR C 294 -152.06 -114.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ALA C 99 -14.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 43 SG REMARK 620 2 CYS A 153 SG 146.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 97 O REMARK 620 2 CYS A 100 SG 111.0 REMARK 620 3 CYS A 103 SG 62.7 81.4 REMARK 620 4 CYS A 111 SG 108.9 127.7 88.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 43 SG REMARK 620 2 HIS B 66 NE2 110.7 REMARK 620 3 CYS B 153 SG 150.8 95.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 97 O REMARK 620 2 CYS B 100 SG 120.3 REMARK 620 3 CYS B 103 SG 78.2 97.5 REMARK 620 4 CYS B 111 SG 105.2 133.6 82.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 43 SG REMARK 620 2 HIS D 66 NE2 120.4 REMARK 620 3 CYS D 153 SG 148.3 90.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 100 SG REMARK 620 2 CYS D 103 SG 94.9 REMARK 620 3 CYS D 111 SG 120.9 96.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 43 SG REMARK 620 2 HIS C 66 NE2 121.7 REMARK 620 3 CYS C 153 SG 145.2 93.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 97 O REMARK 620 2 CYS C 100 SG 130.4 REMARK 620 3 CYS C 111 SG 100.7 105.3 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-12591 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF S.CEREVISIAE NATIVE ALCOHOL DEHYDROGENASE 1 REMARK 900 (ADH1) IN ITS TETRAMERIC APO STATE DBREF 7NTM A 1 347 UNP P00330 ADH1_YEAST 2 348 DBREF 7NTM B 1 347 UNP P00330 ADH1_YEAST 2 348 DBREF 7NTM D 1 347 UNP P00330 ADH1_YEAST 2 348 DBREF 7NTM C 1 347 UNP P00330 ADH1_YEAST 2 348 SEQRES 1 A 347 SER ILE PRO GLU THR GLN LYS GLY VAL ILE PHE TYR GLU SEQRES 2 A 347 SER HIS GLY LYS LEU GLU TYR LYS ASP ILE PRO VAL PRO SEQRES 3 A 347 LYS PRO LYS ALA ASN GLU LEU LEU ILE ASN VAL LYS TYR SEQRES 4 A 347 SER GLY VAL CYS HIS THR ASP LEU HIS ALA TRP HIS GLY SEQRES 5 A 347 ASP TRP PRO LEU PRO VAL LYS LEU PRO LEU VAL GLY GLY SEQRES 6 A 347 HIS GLU GLY ALA GLY VAL VAL VAL GLY MET GLY GLU ASN SEQRES 7 A 347 VAL LYS GLY TRP LYS ILE GLY ASP TYR ALA GLY ILE LYS SEQRES 8 A 347 TRP LEU ASN GLY SER CYS MET ALA CYS GLU TYR CYS GLU SEQRES 9 A 347 LEU GLY ASN GLU SER ASN CYS PRO HIS ALA ASP LEU SER SEQRES 10 A 347 GLY TYR THR HIS ASP GLY SER PHE GLN GLN TYR ALA THR SEQRES 11 A 347 ALA ASP ALA VAL GLN ALA ALA HIS ILE PRO GLN GLY THR SEQRES 12 A 347 ASP LEU ALA GLN VAL ALA PRO ILE LEU CYS ALA GLY ILE SEQRES 13 A 347 THR VAL TYR LYS ALA LEU LYS SER ALA ASN LEU MET ALA SEQRES 14 A 347 GLY HIS TRP VAL ALA ILE SER GLY ALA ALA GLY GLY LEU SEQRES 15 A 347 GLY SER LEU ALA VAL GLN TYR ALA LYS ALA MET GLY TYR SEQRES 16 A 347 ARG VAL LEU GLY ILE ASP GLY GLY GLU GLY LYS GLU GLU SEQRES 17 A 347 LEU PHE ARG SER ILE GLY GLY GLU VAL PHE ILE ASP PHE SEQRES 18 A 347 THR LYS GLU LYS ASP ILE VAL GLY ALA VAL LEU LYS ALA SEQRES 19 A 347 THR ASP GLY GLY ALA HIS GLY VAL ILE ASN VAL SER VAL SEQRES 20 A 347 SER GLU ALA ALA ILE GLU ALA SER THR ARG TYR VAL ARG SEQRES 21 A 347 ALA ASN GLY THR THR VAL LEU VAL GLY MET PRO ALA GLY SEQRES 22 A 347 ALA LYS CYS CYS SER ASP VAL PHE ASN GLN VAL VAL LYS SEQRES 23 A 347 SER ILE SER ILE VAL GLY SER TYR VAL GLY ASN ARG ALA SEQRES 24 A 347 ASP THR ARG GLU ALA LEU ASP PHE PHE ALA ARG GLY LEU SEQRES 25 A 347 VAL LYS SER PRO ILE LYS VAL VAL GLY LEU SER THR LEU SEQRES 26 A 347 PRO GLU ILE TYR GLU LYS MET GLU LYS GLY GLN ILE VAL SEQRES 27 A 347 GLY ARG TYR VAL VAL ASP THR SER LYS SEQRES 1 B 347 SER ILE PRO GLU THR GLN LYS GLY VAL ILE PHE TYR GLU SEQRES 2 B 347 SER HIS GLY LYS LEU GLU TYR LYS ASP ILE PRO VAL PRO SEQRES 3 B 347 LYS PRO LYS ALA ASN GLU LEU LEU ILE ASN VAL LYS TYR SEQRES 4 B 347 SER GLY VAL CYS HIS THR ASP LEU HIS ALA TRP HIS GLY SEQRES 5 B 347 ASP TRP PRO LEU PRO VAL LYS LEU PRO LEU VAL GLY GLY SEQRES 6 B 347 HIS GLU GLY ALA GLY VAL VAL VAL GLY MET GLY GLU ASN SEQRES 7 B 347 VAL LYS GLY TRP LYS ILE GLY ASP TYR ALA GLY ILE LYS SEQRES 8 B 347 TRP LEU ASN GLY SER CYS MET ALA CYS GLU TYR CYS GLU SEQRES 9 B 347 LEU GLY ASN GLU SER ASN CYS PRO HIS ALA ASP LEU SER SEQRES 10 B 347 GLY TYR THR HIS ASP GLY SER PHE GLN GLN TYR ALA THR SEQRES 11 B 347 ALA ASP ALA VAL GLN ALA ALA HIS ILE PRO GLN GLY THR SEQRES 12 B 347 ASP LEU ALA GLN VAL ALA PRO ILE LEU CYS ALA GLY ILE SEQRES 13 B 347 THR VAL TYR LYS ALA LEU LYS SER ALA ASN LEU MET ALA SEQRES 14 B 347 GLY HIS TRP VAL ALA ILE SER GLY ALA ALA GLY GLY LEU SEQRES 15 B 347 GLY SER LEU ALA VAL GLN TYR ALA LYS ALA MET GLY TYR SEQRES 16 B 347 ARG VAL LEU GLY ILE ASP GLY GLY GLU GLY LYS GLU GLU SEQRES 17 B 347 LEU PHE ARG SER ILE GLY GLY GLU VAL PHE ILE ASP PHE SEQRES 18 B 347 THR LYS GLU LYS ASP ILE VAL GLY ALA VAL LEU LYS ALA SEQRES 19 B 347 THR ASP GLY GLY ALA HIS GLY VAL ILE ASN VAL SER VAL SEQRES 20 B 347 SER GLU ALA ALA ILE GLU ALA SER THR ARG TYR VAL ARG SEQRES 21 B 347 ALA ASN GLY THR THR VAL LEU VAL GLY MET PRO ALA GLY SEQRES 22 B 347 ALA LYS CYS CYS SER ASP VAL PHE ASN GLN VAL VAL LYS SEQRES 23 B 347 SER ILE SER ILE VAL GLY SER TYR VAL GLY ASN ARG ALA SEQRES 24 B 347 ASP THR ARG GLU ALA LEU ASP PHE PHE ALA ARG GLY LEU SEQRES 25 B 347 VAL LYS SER PRO ILE LYS VAL VAL GLY LEU SER THR LEU SEQRES 26 B 347 PRO GLU ILE TYR GLU LYS MET GLU LYS GLY GLN ILE VAL SEQRES 27 B 347 GLY ARG TYR VAL VAL ASP THR SER LYS SEQRES 1 D 347 SER ILE PRO GLU THR GLN LYS GLY VAL ILE PHE TYR GLU SEQRES 2 D 347 SER HIS GLY LYS LEU GLU TYR LYS ASP ILE PRO VAL PRO SEQRES 3 D 347 LYS PRO LYS ALA ASN GLU LEU LEU ILE ASN VAL LYS TYR SEQRES 4 D 347 SER GLY VAL CYS HIS THR ASP LEU HIS ALA TRP HIS GLY SEQRES 5 D 347 ASP TRP PRO LEU PRO VAL LYS LEU PRO LEU VAL GLY GLY SEQRES 6 D 347 HIS GLU GLY ALA GLY VAL VAL VAL GLY MET GLY GLU ASN SEQRES 7 D 347 VAL LYS GLY TRP LYS ILE GLY ASP TYR ALA GLY ILE LYS SEQRES 8 D 347 TRP LEU ASN GLY SER CYS MET ALA CYS GLU TYR CYS GLU SEQRES 9 D 347 LEU GLY ASN GLU SER ASN CYS PRO HIS ALA ASP LEU SER SEQRES 10 D 347 GLY TYR THR HIS ASP GLY SER PHE GLN GLN TYR ALA THR SEQRES 11 D 347 ALA ASP ALA VAL GLN ALA ALA HIS ILE PRO GLN GLY THR SEQRES 12 D 347 ASP LEU ALA GLN VAL ALA PRO ILE LEU CYS ALA GLY ILE SEQRES 13 D 347 THR VAL TYR LYS ALA LEU LYS SER ALA ASN LEU MET ALA SEQRES 14 D 347 GLY HIS TRP VAL ALA ILE SER GLY ALA ALA GLY GLY LEU SEQRES 15 D 347 GLY SER LEU ALA VAL GLN TYR ALA LYS ALA MET GLY TYR SEQRES 16 D 347 ARG VAL LEU GLY ILE ASP GLY GLY GLU GLY LYS GLU GLU SEQRES 17 D 347 LEU PHE ARG SER ILE GLY GLY GLU VAL PHE ILE ASP PHE SEQRES 18 D 347 THR LYS GLU LYS ASP ILE VAL GLY ALA VAL LEU LYS ALA SEQRES 19 D 347 THR ASP GLY GLY ALA HIS GLY VAL ILE ASN VAL SER VAL SEQRES 20 D 347 SER GLU ALA ALA ILE GLU ALA SER THR ARG TYR VAL ARG SEQRES 21 D 347 ALA ASN GLY THR THR VAL LEU VAL GLY MET PRO ALA GLY SEQRES 22 D 347 ALA LYS CYS CYS SER ASP VAL PHE ASN GLN VAL VAL LYS SEQRES 23 D 347 SER ILE SER ILE VAL GLY SER TYR VAL GLY ASN ARG ALA SEQRES 24 D 347 ASP THR ARG GLU ALA LEU ASP PHE PHE ALA ARG GLY LEU SEQRES 25 D 347 VAL LYS SER PRO ILE LYS VAL VAL GLY LEU SER THR LEU SEQRES 26 D 347 PRO GLU ILE TYR GLU LYS MET GLU LYS GLY GLN ILE VAL SEQRES 27 D 347 GLY ARG TYR VAL VAL ASP THR SER LYS SEQRES 1 C 347 SER ILE PRO GLU THR GLN LYS GLY VAL ILE PHE TYR GLU SEQRES 2 C 347 SER HIS GLY LYS LEU GLU TYR LYS ASP ILE PRO VAL PRO SEQRES 3 C 347 LYS PRO LYS ALA ASN GLU LEU LEU ILE ASN VAL LYS TYR SEQRES 4 C 347 SER GLY VAL CYS HIS THR ASP LEU HIS ALA TRP HIS GLY SEQRES 5 C 347 ASP TRP PRO LEU PRO VAL LYS LEU PRO LEU VAL GLY GLY SEQRES 6 C 347 HIS GLU GLY ALA GLY VAL VAL VAL GLY MET GLY GLU ASN SEQRES 7 C 347 VAL LYS GLY TRP LYS ILE GLY ASP TYR ALA GLY ILE LYS SEQRES 8 C 347 TRP LEU ASN GLY SER CYS MET ALA CYS GLU TYR CYS GLU SEQRES 9 C 347 LEU GLY ASN GLU SER ASN CYS PRO HIS ALA ASP LEU SER SEQRES 10 C 347 GLY TYR THR HIS ASP GLY SER PHE GLN GLN TYR ALA THR SEQRES 11 C 347 ALA ASP ALA VAL GLN ALA ALA HIS ILE PRO GLN GLY THR SEQRES 12 C 347 ASP LEU ALA GLN VAL ALA PRO ILE LEU CYS ALA GLY ILE SEQRES 13 C 347 THR VAL TYR LYS ALA LEU LYS SER ALA ASN LEU MET ALA SEQRES 14 C 347 GLY HIS TRP VAL ALA ILE SER GLY ALA ALA GLY GLY LEU SEQRES 15 C 347 GLY SER LEU ALA VAL GLN TYR ALA LYS ALA MET GLY TYR SEQRES 16 C 347 ARG VAL LEU GLY ILE ASP GLY GLY GLU GLY LYS GLU GLU SEQRES 17 C 347 LEU PHE ARG SER ILE GLY GLY GLU VAL PHE ILE ASP PHE SEQRES 18 C 347 THR LYS GLU LYS ASP ILE VAL GLY ALA VAL LEU LYS ALA SEQRES 19 C 347 THR ASP GLY GLY ALA HIS GLY VAL ILE ASN VAL SER VAL SEQRES 20 C 347 SER GLU ALA ALA ILE GLU ALA SER THR ARG TYR VAL ARG SEQRES 21 C 347 ALA ASN GLY THR THR VAL LEU VAL GLY MET PRO ALA GLY SEQRES 22 C 347 ALA LYS CYS CYS SER ASP VAL PHE ASN GLN VAL VAL LYS SEQRES 23 C 347 SER ILE SER ILE VAL GLY SER TYR VAL GLY ASN ARG ALA SEQRES 24 C 347 ASP THR ARG GLU ALA LEU ASP PHE PHE ALA ARG GLY LEU SEQRES 25 C 347 VAL LYS SER PRO ILE LYS VAL VAL GLY LEU SER THR LEU SEQRES 26 C 347 PRO GLU ILE TYR GLU LYS MET GLU LYS GLY GLN ILE VAL SEQRES 27 C 347 GLY ARG TYR VAL VAL ASP THR SER LYS HET ZN A 401 1 HET ZN A 402 1 HET ZN B 401 1 HET ZN B 402 1 HET ZN D 401 1 HET ZN D 402 1 HET ZN C 401 1 HET ZN C 402 1 HETNAM ZN ZINC ION FORMUL 5 ZN 8(ZN 2+) HELIX 1 AA1 CYS A 43 GLY A 52 1 10 HELIX 2 AA2 CYS A 100 GLY A 106 1 7 HELIX 3 AA3 ASN A 107 CYS A 111 5 5 HELIX 4 AA4 ALA A 149 LEU A 152 5 4 HELIX 5 AA5 CYS A 153 ASN A 166 1 14 HELIX 6 AA6 GLY A 180 MET A 193 1 14 HELIX 7 AA7 GLY A 205 SER A 212 1 8 HELIX 8 AA8 ASP A 226 THR A 235 1 10 HELIX 9 AA9 SER A 248 TYR A 258 1 11 HELIX 10 AB1 ASP A 279 SER A 287 1 9 HELIX 11 AB2 ASN A 297 GLY A 311 1 15 HELIX 12 AB3 THR A 324 GLY A 335 1 12 HELIX 13 AB4 HIS B 44 GLY B 52 1 9 HELIX 14 AB5 GLU B 101 GLY B 106 1 6 HELIX 15 AB6 ASN B 107 CYS B 111 5 5 HELIX 16 AB7 ALA B 149 LEU B 152 5 4 HELIX 17 AB8 CYS B 153 SER B 164 1 12 HELIX 18 AB9 GLY B 180 MET B 193 1 14 HELIX 19 AC1 GLY B 205 SER B 212 1 8 HELIX 20 AC2 ASP B 226 THR B 235 1 10 HELIX 21 AC3 SER B 248 THR B 256 1 9 HELIX 22 AC4 ASP B 279 SER B 287 1 9 HELIX 23 AC5 ASN B 297 GLY B 311 1 15 HELIX 24 AC6 THR B 324 GLY B 335 1 12 HELIX 25 AC7 HIS D 44 GLY D 52 1 9 HELIX 26 AC8 ASN D 107 CYS D 111 5 5 HELIX 27 AC9 ALA D 149 LEU D 152 5 4 HELIX 28 AD1 CYS D 153 SER D 164 1 12 HELIX 29 AD2 GLY D 180 MET D 193 1 14 HELIX 30 AD3 GLY D 205 ILE D 213 1 9 HELIX 31 AD4 ASP D 226 THR D 235 1 10 HELIX 32 AD5 SER D 248 TYR D 258 1 11 HELIX 33 AD6 ASP D 279 SER D 287 1 9 HELIX 34 AD7 ASN D 297 GLY D 311 1 15 HELIX 35 AD8 THR D 324 GLY D 335 1 12 HELIX 36 AD9 CYS C 43 GLY C 52 1 10 HELIX 37 AE1 CYS C 100 LEU C 105 1 6 HELIX 38 AE2 ASN C 107 CYS C 111 5 5 HELIX 39 AE3 ALA C 149 LEU C 152 5 4 HELIX 40 AE4 CYS C 153 SER C 164 1 12 HELIX 41 AE5 GLY C 180 MET C 193 1 14 HELIX 42 AE6 GLY C 205 GLY C 214 1 10 HELIX 43 AE7 ASP C 226 THR C 235 1 10 HELIX 44 AE8 SER C 248 TYR C 258 1 11 HELIX 45 AE9 ASP C 279 SER C 287 1 9 HELIX 46 AF1 ASN C 297 GLY C 311 1 15 HELIX 47 AF2 THR C 324 GLY C 335 1 12 SHEET 1 AA1 3 GLU A 19 PRO A 24 0 SHEET 2 AA1 3 THR A 5 PHE A 11 -1 N GLN A 6 O ILE A 23 SHEET 3 AA1 3 LEU A 62 VAL A 63 -1 O LEU A 62 N PHE A 11 SHEET 1 AA2 5 TYR A 128 ASP A 132 0 SHEET 2 AA2 5 GLU A 32 GLY A 41 -1 N ILE A 35 O ALA A 129 SHEET 3 AA2 5 GLU A 67 MET A 75 -1 O GLU A 67 N GLY A 41 SHEET 4 AA2 5 TYR A 87 ILE A 90 -1 O ILE A 90 N GLY A 68 SHEET 5 AA2 5 ALA A 137 ILE A 139 -1 O ALA A 137 N GLY A 89 SHEET 1 AA3 4 TYR A 128 ASP A 132 0 SHEET 2 AA3 4 GLU A 32 GLY A 41 -1 N ILE A 35 O ALA A 129 SHEET 3 AA3 4 ARG A 340 ASP A 344 -1 O VAL A 343 N SER A 40 SHEET 4 AA3 4 ILE A 317 GLY A 321 1 N VAL A 320 O ASP A 344 SHEET 1 AA412 VAL A 217 ASP A 220 0 SHEET 2 AA412 ARG A 196 ASP A 201 1 N GLY A 199 O ILE A 219 SHEET 3 AA412 TRP A 172 SER A 176 1 N VAL A 173 O ARG A 196 SHEET 4 AA412 ALA A 239 ASN A 244 1 O GLY A 241 N ALA A 174 SHEET 5 AA412 VAL A 259 LEU A 267 1 O VAL A 266 N VAL A 242 SHEET 6 AA412 SER A 289 GLY A 292 1 O VAL A 291 N LEU A 267 SHEET 7 AA412 SER B 289 GLY B 292 -1 O ILE B 290 N ILE A 290 SHEET 8 AA412 VAL B 259 LEU B 267 1 N THR B 265 O SER B 289 SHEET 9 AA412 ALA B 239 ASN B 244 1 N VAL B 242 O VAL B 266 SHEET 10 AA412 TRP B 172 SER B 176 1 N ALA B 174 O GLY B 241 SHEET 11 AA412 ARG B 196 ILE B 200 1 O ARG B 196 N VAL B 173 SHEET 12 AA412 VAL B 217 ILE B 219 1 O ILE B 219 N GLY B 199 SHEET 1 AA5 3 GLU B 19 PRO B 24 0 SHEET 2 AA5 3 THR B 5 PHE B 11 -1 N ILE B 10 O GLU B 19 SHEET 3 AA5 3 LEU B 62 VAL B 63 -1 O LEU B 62 N PHE B 11 SHEET 1 AA6 5 TYR B 128 ASP B 132 0 SHEET 2 AA6 5 GLU B 32 VAL B 42 -1 N ILE B 35 O ALA B 129 SHEET 3 AA6 5 GLU B 67 MET B 75 -1 O GLY B 74 N LEU B 34 SHEET 4 AA6 5 TYR B 87 ILE B 90 -1 O ILE B 90 N GLY B 68 SHEET 5 AA6 5 ALA B 137 ILE B 139 -1 O ALA B 137 N GLY B 89 SHEET 1 AA7 4 TYR B 128 ASP B 132 0 SHEET 2 AA7 4 GLU B 32 VAL B 42 -1 N ILE B 35 O ALA B 129 SHEET 3 AA7 4 ARG B 340 ASP B 344 -1 O VAL B 343 N SER B 40 SHEET 4 AA7 4 ILE B 317 GLY B 321 1 N VAL B 320 O ASP B 344 SHEET 1 AA8 2 LEU B 93 SER B 96 0 SHEET 2 AA8 2 ALA B 114 LEU B 116 -1 O ASP B 115 N ASN B 94 SHEET 1 AA9 3 GLU D 19 PRO D 24 0 SHEET 2 AA9 3 THR D 5 PHE D 11 -1 N ILE D 10 O GLU D 19 SHEET 3 AA9 3 LEU D 62 VAL D 63 -1 O LEU D 62 N PHE D 11 SHEET 1 AB1 5 TYR D 128 ASP D 132 0 SHEET 2 AB1 5 GLU D 32 VAL D 42 -1 N ILE D 35 O ALA D 129 SHEET 3 AB1 5 GLU D 67 MET D 75 -1 O GLY D 74 N LEU D 34 SHEET 4 AB1 5 TYR D 87 ILE D 90 -1 O ILE D 90 N GLY D 68 SHEET 5 AB1 5 ALA D 137 ILE D 139 -1 O ALA D 137 N GLY D 89 SHEET 1 AB2 4 TYR D 128 ASP D 132 0 SHEET 2 AB2 4 GLU D 32 VAL D 42 -1 N ILE D 35 O ALA D 129 SHEET 3 AB2 4 TYR D 341 ASP D 344 -1 O VAL D 343 N SER D 40 SHEET 4 AB2 4 VAL D 320 GLY D 321 1 N VAL D 320 O ASP D 344 SHEET 1 AB312 VAL D 217 ILE D 219 0 SHEET 2 AB312 ARG D 196 ILE D 200 1 N GLY D 199 O ILE D 219 SHEET 3 AB312 TRP D 172 SER D 176 1 N VAL D 173 O ARG D 196 SHEET 4 AB312 ALA D 239 ASN D 244 1 O GLY D 241 N ALA D 174 SHEET 5 AB312 VAL D 259 LEU D 267 1 O VAL D 266 N ASN D 244 SHEET 6 AB312 SER D 289 GLY D 292 1 O SER D 289 N THR D 265 SHEET 7 AB312 SER C 289 GLY C 292 -1 O ILE C 290 N ILE D 290 SHEET 8 AB312 VAL C 259 LEU C 267 1 N THR C 265 O SER C 289 SHEET 9 AB312 ALA C 239 ASN C 244 1 N ASN C 244 O VAL C 266 SHEET 10 AB312 TRP C 172 SER C 176 1 N ALA C 174 O GLY C 241 SHEET 11 AB312 ARG C 196 ILE C 200 1 O ARG C 196 N VAL C 173 SHEET 12 AB312 VAL C 217 ILE C 219 1 O ILE C 219 N GLY C 199 SHEET 1 AB4 2 THR C 5 ILE C 10 0 SHEET 2 AB4 2 GLU C 19 PRO C 24 -1 O GLU C 19 N ILE C 10 SHEET 1 AB5 5 TYR C 128 ASP C 132 0 SHEET 2 AB5 5 GLU C 32 VAL C 42 -1 N ILE C 35 O ALA C 129 SHEET 3 AB5 5 GLU C 67 MET C 75 -1 O GLY C 74 N LEU C 34 SHEET 4 AB5 5 TYR C 87 ILE C 90 -1 O ILE C 90 N GLY C 68 SHEET 5 AB5 5 ALA C 137 ILE C 139 -1 O ALA C 137 N GLY C 89 SHEET 1 AB6 4 TYR C 128 ASP C 132 0 SHEET 2 AB6 4 GLU C 32 VAL C 42 -1 N ILE C 35 O ALA C 129 SHEET 3 AB6 4 ARG C 340 ASP C 344 -1 O VAL C 343 N SER C 40 SHEET 4 AB6 4 ILE C 317 GLY C 321 1 N VAL C 320 O ASP C 344 SSBOND 1 CYS A 277 CYS B 277 1555 1555 2.03 SSBOND 2 CYS D 277 CYS C 277 1555 1555 2.59 LINK SG CYS A 43 ZN ZN A 401 1555 1555 2.61 LINK O CYS A 97 ZN ZN A 402 1555 1555 2.64 LINK SG CYS A 100 ZN ZN A 402 1555 1555 2.29 LINK SG CYS A 103 ZN ZN A 402 1555 1555 2.84 LINK SG CYS A 111 ZN ZN A 402 1555 1555 2.15 LINK SG CYS A 153 ZN ZN A 401 1555 1555 2.63 LINK SG CYS B 43 ZN ZN B 401 1555 1555 2.45 LINK NE2 HIS B 66 ZN ZN B 401 1555 1555 2.27 LINK O CYS B 97 ZN ZN B 402 1555 1555 2.43 LINK SG CYS B 100 ZN ZN B 402 1555 1555 2.32 LINK SG CYS B 103 ZN ZN B 402 1555 1555 2.22 LINK SG CYS B 111 ZN ZN B 402 1555 1555 2.48 LINK SG CYS B 153 ZN ZN B 401 1555 1555 2.37 LINK SG CYS D 43 ZN ZN D 401 1555 1555 2.34 LINK NE2 HIS D 66 ZN ZN D 401 1555 1555 2.13 LINK SG CYS D 100 ZN ZN D 402 1555 1555 2.56 LINK SG CYS D 103 ZN ZN D 402 1555 1555 2.08 LINK SG CYS D 111 ZN ZN D 402 1555 1555 2.30 LINK SG CYS D 153 ZN ZN D 401 1555 1555 2.59 LINK SG CYS C 43 ZN ZN C 401 1555 1555 2.41 LINK NE2 HIS C 66 ZN ZN C 401 1555 1555 2.14 LINK O CYS C 97 ZN ZN C 402 1555 1555 2.69 LINK SG CYS C 100 ZN ZN C 402 1555 1555 2.34 LINK SG CYS C 111 ZN ZN C 402 1555 1555 2.61 LINK SG CYS C 153 ZN ZN C 401 1555 1555 2.51 CISPEP 1 LEU A 60 PRO A 61 0 1.01 CISPEP 2 LEU B 60 PRO B 61 0 -2.48 CISPEP 3 LEU D 60 PRO D 61 0 -1.88 CISPEP 4 LEU C 60 PRO C 61 0 -1.99 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000