HEADER VIRUS 12-MAR-21 7NUQ TITLE RHINOVIRUS 14 VIRION-LIKE AT PH 6.2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENOME POLYPROTEIN; COMPND 3 CHAIN: 1; COMPND 4 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: GENOME POLYPROTEIN; COMPND 7 CHAIN: 2; COMPND 8 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: GENOME POLYPROTEIN; COMPND 11 CHAIN: 3; COMPND 12 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: GENOME POLYPROTEIN; COMPND 15 CHAIN: 4; COMPND 16 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 17 MOL_ID: 5; COMPND 18 MOLECULE: OCTANUCLEOTIDE; COMPND 19 CHAIN: C SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN RHINOVIRUS 14; SOURCE 3 ORGANISM_COMMON: HRV-14; SOURCE 4 ORGANISM_TAXID: 12131; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HUMAN RHINOVIRUS 14; SOURCE 7 ORGANISM_COMMON: HRV-14; SOURCE 8 ORGANISM_TAXID: 12131; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HUMAN RHINOVIRUS 14; SOURCE 11 ORGANISM_COMMON: HRV-14; SOURCE 12 ORGANISM_TAXID: 12131; SOURCE 13 MOL_ID: 4; SOURCE 14 ORGANISM_SCIENTIFIC: HUMAN RHINOVIRUS 14; SOURCE 15 ORGANISM_COMMON: HRV-14; SOURCE 16 ORGANISM_TAXID: 12131; SOURCE 17 MOL_ID: 5; SOURCE 18 ORGANISM_SCIENTIFIC: RHINOVIRUS B14; SOURCE 19 ORGANISM_TAXID: 12131 KEYWDS RHINOVIRUS 14, RV14, HRV14, ACIDIFICATION, PH 6.2, GENOME RELEASE, KEYWDS 2 VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR D.HREBIK,P.PLEVKA REVDAT 1 19-MAY-21 7NUQ 0 JRNL AUTH D.HREBIK,T.FUZIK,M.GONDOVA,L.SMERDOVA,A.ADAMOPOULOS,O.SEDO, JRNL AUTH 2 Z.ZDRAHAL,P.PLEVKA JRNL TITL ICAM-1 INDUCED REARRANGEMENTS OF CAPSID AND GENOME PRIME JRNL TITL 2 RHINOVIRUS 14 FOR ACTIVATION AND UNCOATING. JRNL REF PROC.NATL.ACAD.SCI.USA V. 118 2021 JRNL REFN ESSN 1091-6490 JRNL PMID 33947819 JRNL DOI 10.1073/PNAS.2024251118 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, UCSF CHIMERA, RELION, RELION, REMARK 3 RELION, PHENIX, ISOLDE REMARK 3 RECONSTRUCTION SCHEMA : EXACT BACK PROJECTION REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 7BG6 REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : CORRELATION COEFFICIENT REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.800 REMARK 3 NUMBER OF PARTICLES : 16860 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7NUQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1292114621. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : RHINOVIRUS B14 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.50 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 6.20 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 3745 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TALOS ARCTICA REMARK 245 DETECTOR TYPE : FEI FALCON III (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 3410.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 120000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 300-MERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 2, 3, 4, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 2 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 2 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 4 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 4 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 5 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 5 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 5 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 6 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 6 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 6 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 7 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 7 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 7 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 8 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 8 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 8 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 9 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 9 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 9 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 10 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 10 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 10 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 11 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 11 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 11 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 12 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 12 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 12 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 13 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 13 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 13 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 14 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 14 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 14 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 15 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 15 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 15 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 16 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 16 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 16 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 17 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 17 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 17 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 18 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 18 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 18 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 19 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 19 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 19 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 20 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 20 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 20 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 21 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 21 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 21 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 22 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 22 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 22 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 23 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 23 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 24 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 24 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 24 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 25 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 25 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 25 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 26 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 26 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 26 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 27 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 27 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 27 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 28 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 28 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 28 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 29 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 29 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 29 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 30 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 30 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 30 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 31 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 31 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 31 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 32 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 32 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 32 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 33 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 33 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 33 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 34 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 34 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 34 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 35 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 35 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 35 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 36 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 36 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 36 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 37 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 37 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 37 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 38 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 38 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 38 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 39 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 39 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 39 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 40 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 40 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 40 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 41 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 41 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 41 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 42 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 42 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 42 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 43 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 43 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 43 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 44 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 44 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 44 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 45 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 45 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 45 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 46 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 46 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 46 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 47 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 47 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 47 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 48 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 48 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 48 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 49 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 49 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 49 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 50 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 50 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 50 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 51 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 51 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 51 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 52 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 52 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 52 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 53 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 53 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 53 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 54 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 54 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 54 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 55 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 55 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 55 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 56 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 56 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 56 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 57 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 57 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 57 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 58 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 58 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 58 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 59 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 59 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 59 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 60 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 60 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 60 -0.500000 0.309017 0.809017 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA 1 -3 REMARK 465 LEU 1 -2 REMARK 465 THR 1 -1 REMARK 465 GLU 1 0 REMARK 465 GLY 1 1 REMARK 465 LEU 1 2 REMARK 465 GLY 1 3 REMARK 465 ASP 1 4 REMARK 465 GLU 1 5 REMARK 465 LEU 1 6 REMARK 465 GLU 1 7 REMARK 465 GLU 1 8 REMARK 465 VAL 1 9 REMARK 465 ILE 1 10 REMARK 465 VAL 1 11 REMARK 465 GLU 1 12 REMARK 465 LYS 1 13 REMARK 465 THR 1 14 REMARK 465 LYS 1 15 REMARK 465 GLN 1 16 REMARK 465 SER 2 1 REMARK 465 PRO 2 2 REMARK 465 ASN 2 3 REMARK 465 VAL 2 4 REMARK 465 GLU 2 5 REMARK 465 ALA 2 6 REMARK 465 GLY 4 1 REMARK 465 ALA 4 2 REMARK 465 GLN 4 3 REMARK 465 VAL 4 4 REMARK 465 SER 4 5 REMARK 465 THR 4 6 REMARK 465 GLN 4 7 REMARK 465 LYS 4 8 REMARK 465 SER 4 9 REMARK 465 GLY 4 10 REMARK 465 SER 4 11 REMARK 465 HIS 4 12 REMARK 465 GLU 4 13 REMARK 465 ASN 4 14 REMARK 465 GLN 4 15 REMARK 465 ASN 4 16 REMARK 465 ILE 4 17 REMARK 465 LEU 4 18 REMARK 465 THR 4 19 REMARK 465 ASN 4 20 REMARK 465 GLY 4 21 REMARK 465 SER 4 22 REMARK 465 ASN 4 23 REMARK 465 GLN 4 24 REMARK 465 THR 4 25 REMARK 465 PHE 4 26 REMARK 465 THR 4 27 REMARK 465 VAL 4 28 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN 1 198 CD1 LEU 1 218 1.84 REMARK 500 OG SER 1 144 OD2 ASP 1 233 1.89 REMARK 500 OE1 GLN 1 83 NZ LYS 1 85 2.07 REMARK 500 NE2 GLN 2 187 O THR 2 198 2.15 REMARK 500 OD1 ASP 1 125 ND1 HIS 1 249 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 U C 3 C1' U C 3 N1 0.093 REMARK 500 U C 4 C1' U C 4 N1 0.102 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 U C 1 O4' - C1' - N1 ANGL. DEV. = 4.9 DEGREES REMARK 500 U C 6 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 A C 8 C4 - C5 - C6 ANGL. DEV. = -3.2 DEGREES REMARK 500 A C 8 C5 - C6 - N1 ANGL. DEV. = 3.8 DEGREES REMARK 500 A C 8 N1 - C6 - N6 ANGL. DEV. = -5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN 1 159 105.82 -58.96 REMARK 500 ILE 1 254 71.25 51.78 REMARK 500 PHE 2 98 0.74 -66.93 REMARK 500 SER 2 104 147.62 -170.09 REMARK 500 HIS 2 148 70.41 -113.73 REMARK 500 SER 3 194 168.34 173.97 REMARK 500 ASP 4 48 78.08 -159.74 REMARK 500 PRO 4 55 47.93 -83.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-12171 RELATED DB: EMDB REMARK 900 RELATED ID: 7BG6 RELATED DB: PDB REMARK 900 RELATED ID: EMD-12172 RELATED DB: EMDB REMARK 900 RELATED ID: 7BG7 RELATED DB: PDB REMARK 900 RELATED ID: EMD-12599 RELATED DB: EMDB REMARK 900 RHINOVIRUS 14 VIRION-LIKE AT PH 6.2 DBREF 7NUQ 1 -3 289 UNP P03303 POLG_HRV14 564 856 DBREF 7NUQ 2 1 262 UNP P03303 POLG_HRV14 70 331 DBREF 7NUQ 3 1 236 UNP P03303 POLG_HRV14 332 567 DBREF 7NUQ 4 1 68 UNP P03303 POLG_HRV14 2 69 DBREF 7NUQ C 1 8 PDB 7NUQ 7NUQ 1 8 SEQRES 1 1 293 ALA LEU THR GLU GLY LEU GLY ASP GLU LEU GLU GLU VAL SEQRES 2 1 293 ILE VAL GLU LYS THR LYS GLN THR VAL ALA SER ILE SER SEQRES 3 1 293 SER GLY PRO LYS HIS THR GLN LYS VAL PRO ILE LEU THR SEQRES 4 1 293 ALA ASN GLU THR GLY ALA THR MET PRO VAL LEU PRO SER SEQRES 5 1 293 ASP SER ILE GLU THR ARG THR THR TYR MET HIS PHE ASN SEQRES 6 1 293 GLY SER GLU THR ASP VAL GLU CYS PHE LEU GLY ARG ALA SEQRES 7 1 293 ALA CYS VAL HIS VAL THR GLU ILE GLN ASN LYS ASP ALA SEQRES 8 1 293 THR GLY ILE ASP ASN HIS ARG GLU ALA LYS LEU PHE ASN SEQRES 9 1 293 ASP TRP LYS ILE ASN LEU SER SER LEU VAL GLN LEU ARG SEQRES 10 1 293 LYS LYS LEU GLU LEU PHE THR TYR VAL ARG PHE ASP SER SEQRES 11 1 293 GLU TYR THR ILE LEU ALA THR ALA SER GLN PRO ASP SER SEQRES 12 1 293 ALA ASN TYR SER SER ASN LEU VAL VAL GLN ALA MET TYR SEQRES 13 1 293 VAL PRO PRO GLY ALA PRO ASN PRO LYS GLU TRP ASP ASP SEQRES 14 1 293 TYR THR TRP GLN SER ALA SER ASN PRO SER VAL PHE PHE SEQRES 15 1 293 LYS VAL GLY ASP THR SER ARG PHE SER VAL PRO TYR VAL SEQRES 16 1 293 GLY LEU ALA SER ALA TYR ASN CYS PHE TYR ASP GLY TYR SEQRES 17 1 293 SER HIS ASP ASP ALA GLU THR GLN TYR GLY ILE THR VAL SEQRES 18 1 293 LEU ASN HIS MET GLY SER MET ALA PHE ARG ILE VAL ASN SEQRES 19 1 293 GLU HIS ASP GLU HIS LYS THR LEU VAL LYS ILE ARG VAL SEQRES 20 1 293 TYR HIS ARG ALA LYS HIS VAL GLU ALA TRP ILE PRO ARG SEQRES 21 1 293 ALA PRO ARG ALA LEU PRO TYR THR SER ILE GLY ARG THR SEQRES 22 1 293 ASN TYR PRO LYS ASN THR GLU PRO VAL ILE LYS LYS ARG SEQRES 23 1 293 LYS GLY ASP ILE LYS SER TYR SEQRES 1 2 262 SER PRO ASN VAL GLU ALA CYS GLY TYR SER ASP ARG VAL SEQRES 2 2 262 GLN GLN ILE THR LEU GLY ASN SER THR ILE THR THR GLN SEQRES 3 2 262 GLU ALA ALA ASN ALA VAL VAL CYS TYR ALA GLU TRP PRO SEQRES 4 2 262 GLU TYR LEU PRO ASP VAL ASP ALA SER ASP VAL ASN LYS SEQRES 5 2 262 THR SER LYS PRO ASP THR SER VAL CYS ARG PHE TYR THR SEQRES 6 2 262 LEU ASP SER LYS THR TRP THR THR GLY SER LYS GLY TRP SEQRES 7 2 262 CYS TRP LYS LEU PRO ASP ALA LEU LYS ASP MET GLY VAL SEQRES 8 2 262 PHE GLY GLN ASN MET PHE PHE HIS SER LEU GLY ARG SER SEQRES 9 2 262 GLY TYR THR VAL HIS VAL GLN CYS ASN ALA THR LYS PHE SEQRES 10 2 262 HIS SER GLY CYS LEU LEU VAL VAL VAL ILE PRO GLU HIS SEQRES 11 2 262 GLN LEU ALA SER HIS GLU GLY GLY ASN VAL SER VAL LYS SEQRES 12 2 262 TYR THR PHE THR HIS PRO GLY GLU ARG GLY ILE ASP LEU SEQRES 13 2 262 SER SER ALA ASN GLU VAL GLY GLY PRO VAL LYS ASP VAL SEQRES 14 2 262 ILE TYR ASN MET ASN GLY THR LEU LEU GLY ASN LEU LEU SEQRES 15 2 262 ILE PHE PRO HIS GLN PHE ILE ASN LEU ARG THR ASN ASN SEQRES 16 2 262 THR ALA THR ILE VAL ILE PRO TYR ILE ASN SER VAL PRO SEQRES 17 2 262 ILE ASP SER MET THR ARG HIS ASN ASN VAL SER LEU MET SEQRES 18 2 262 VAL ILE PRO ILE ALA PRO LEU THR VAL PRO THR GLY ALA SEQRES 19 2 262 THR PRO SER LEU PRO ILE THR VAL THR ILE ALA PRO MET SEQRES 20 2 262 CYS THR GLU PHE SER GLY ILE ARG SER LYS SER ILE VAL SEQRES 21 2 262 PRO GLN SEQRES 1 3 236 GLY LEU PRO THR THR THR LEU PRO GLY SER GLY GLN PHE SEQRES 2 3 236 LEU THR THR ASP ASP ARG GLN SER PRO SER ALA LEU PRO SEQRES 3 3 236 ASN TYR GLU PRO THR PRO ARG ILE HIS ILE PRO GLY LYS SEQRES 4 3 236 VAL HIS ASN LEU LEU GLU ILE ILE GLN VAL ASP THR LEU SEQRES 5 3 236 ILE PRO MET ASN ASN THR HIS THR LYS ASP GLU VAL ASN SEQRES 6 3 236 SER TYR LEU ILE PRO LEU ASN ALA ASN ARG GLN ASN GLU SEQRES 7 3 236 GLN VAL PHE GLY THR ASN LEU PHE ILE GLY ASP GLY VAL SEQRES 8 3 236 PHE LYS THR THR LEU LEU GLY GLU ILE VAL GLN TYR TYR SEQRES 9 3 236 THR HIS TRP SER GLY SER LEU ARG PHE SER LEU MET TYR SEQRES 10 3 236 THR GLY PRO ALA LEU SER SER ALA LYS LEU ILE LEU ALA SEQRES 11 3 236 TYR THR PRO PRO GLY ALA ARG GLY PRO GLN ASP ARG ARG SEQRES 12 3 236 GLU ALA MET LEU GLY THR HIS VAL VAL TRP ASP ILE GLY SEQRES 13 3 236 LEU GLN SER THR ILE VAL MET THR ILE PRO TRP THR SER SEQRES 14 3 236 GLY VAL GLN PHE ARG TYR THR ASP PRO ASP THR TYR THR SEQRES 15 3 236 SER ALA GLY PHE LEU SER CYS TRP TYR GLN THR SER LEU SEQRES 16 3 236 ILE LEU PRO PRO GLU THR THR GLY GLN VAL TYR LEU LEU SEQRES 17 3 236 SER PHE ILE SER ALA CYS PRO ASP PHE LYS LEU ARG LEU SEQRES 18 3 236 MET LYS ASP THR GLN THR ILE SER GLN THR VAL ALA LEU SEQRES 19 3 236 THR GLU SEQRES 1 4 68 GLY ALA GLN VAL SER THR GLN LYS SER GLY SER HIS GLU SEQRES 2 4 68 ASN GLN ASN ILE LEU THR ASN GLY SER ASN GLN THR PHE SEQRES 3 4 68 THR VAL ILE ASN TYR TYR LYS ASP ALA ALA SER THR SER SEQRES 4 4 68 SER ALA GLY GLN SER LEU SER MET ASP PRO SER LYS PHE SEQRES 5 4 68 THR GLU PRO VAL LYS ASP LEU MET LEU LYS GLY ALA PRO SEQRES 6 4 68 ALA LEU ASN SEQRES 1 C 8 U G U U U U U A HELIX 1 AA1 ALA 1 36 GLY 1 40 5 5 HELIX 2 AA2 LEU 1 46 SER 1 50 5 5 HELIX 3 AA3 ASP 1 66 LEU 1 71 1 6 HELIX 4 AA4 HIS 1 93 LYS 1 97 5 5 HELIX 5 AA5 LEU 1 109 LEU 1 118 1 10 HELIX 6 AA6 TYR 2 35 GLU 2 37 5 3 HELIX 7 AA7 PRO 2 43 ALA 2 47 5 5 HELIX 8 AA8 PRO 2 56 CYS 2 61 1 6 HELIX 9 AA9 PRO 2 83 LYS 2 87 5 5 HELIX 10 AB1 MET 2 89 PHE 2 98 1 10 HELIX 11 AB2 LYS 2 143 HIS 2 148 1 6 HELIX 12 AB3 ASP 2 168 ASN 2 172 5 5 HELIX 13 AB4 LEU 2 177 PHE 2 184 5 8 HELIX 14 AB5 ASN 3 42 ILE 3 47 1 6 HELIX 15 AB6 GLU 3 63 SER 3 66 5 4 HELIX 16 AB7 ASP 3 89 THR 3 94 5 6 HELIX 17 AB8 THR 3 95 TYR 3 103 1 9 HELIX 18 AB9 ASP 3 141 MET 3 146 1 6 HELIX 19 AC1 PRO 4 49 GLU 4 54 1 6 SHEET 1 AA1 2 VAL 1 18 SER 1 20 0 SHEET 2 AA1 2 THR 1 56 TYR 1 57 -1 O THR 1 56 N ALA 1 19 SHEET 1 AA2 5 LEU 1 34 THR 1 35 0 SHEET 2 AA2 5 THR 3 160 ILE 3 165 -1 O THR 3 160 N THR 1 35 SHEET 3 AA2 5 LEU 3 111 TYR 3 117 -1 N LEU 3 111 O ILE 3 165 SHEET 4 AA2 5 VAL 3 205 ALA 3 213 -1 O PHE 3 210 N SER 3 114 SHEET 5 AA2 5 THR 3 51 LEU 3 52 -1 N THR 3 51 O ILE 3 211 SHEET 1 AA3 5 LEU 1 34 THR 1 35 0 SHEET 2 AA3 5 THR 3 160 ILE 3 165 -1 O THR 3 160 N THR 1 35 SHEET 3 AA3 5 LEU 3 111 TYR 3 117 -1 N LEU 3 111 O ILE 3 165 SHEET 4 AA3 5 VAL 3 205 ALA 3 213 -1 O PHE 3 210 N SER 3 114 SHEET 5 AA3 5 LEU 3 68 LEU 3 71 -1 N LEU 3 71 O VAL 3 205 SHEET 1 AA4 4 ALA 1 75 ILE 1 82 0 SHEET 2 AA4 4 VAL 1 239 PRO 1 255 -1 O VAL 1 239 N ILE 1 82 SHEET 3 AA4 4 PHE 1 119 THR 1 133 -1 N THR 1 129 O TYR 1 244 SHEET 4 AA4 4 TYR 1 197 ASN 1 198 -1 O TYR 1 197 N VAL 1 122 SHEET 1 AA5 4 PHE 1 186 VAL 1 188 0 SHEET 2 AA5 4 PHE 1 119 THR 1 133 -1 N SER 1 126 O VAL 1 188 SHEET 3 AA5 4 VAL 1 239 PRO 1 255 -1 O TYR 1 244 N THR 1 129 SHEET 4 AA5 4 LYS 3 39 VAL 3 40 -1 O VAL 3 40 N ALA 1 252 SHEET 1 AA6 4 ASN 1 100 TRP 1 102 0 SHEET 2 AA6 4 SER 1 223 ILE 1 228 -1 O PHE 1 226 N ASN 1 100 SHEET 3 AA6 4 VAL 1 148 VAL 1 153 -1 N VAL 1 153 O SER 1 223 SHEET 4 AA6 4 SER 1 175 PHE 1 178 -1 O PHE 1 178 N VAL 1 148 SHEET 1 AA7 2 GLN 2 14 LEU 2 18 0 SHEET 2 AA7 2 SER 2 21 THR 2 25 -1 O SER 2 21 N LEU 2 18 SHEET 1 AA8 5 VAL 2 32 VAL 2 33 0 SHEET 2 AA8 5 THR 2 196 ILE 2 201 1 O VAL 2 200 N VAL 2 32 SHEET 3 AA8 5 LEU 2 101 GLN 2 111 -1 N TYR 2 106 O ILE 2 201 SHEET 4 AA8 5 LEU 2 238 SER 2 252 -1 O MET 2 247 N GLY 2 105 SHEET 5 AA8 5 TYR 2 64 THR 2 65 -1 N TYR 2 64 O ILE 2 244 SHEET 1 AA9 5 VAL 2 32 VAL 2 33 0 SHEET 2 AA9 5 THR 2 196 ILE 2 201 1 O VAL 2 200 N VAL 2 32 SHEET 3 AA9 5 LEU 2 101 GLN 2 111 -1 N TYR 2 106 O ILE 2 201 SHEET 4 AA9 5 LEU 2 238 SER 2 252 -1 O MET 2 247 N GLY 2 105 SHEET 5 AA9 5 LYS 2 69 TRP 2 71 -1 N LYS 2 69 O ILE 2 240 SHEET 1 AB1 5 ILE 2 154 ASP 2 155 0 SHEET 2 AB1 5 TRP 2 78 LEU 2 82 -1 N CYS 2 79 O ILE 2 154 SHEET 3 AB1 5 VAL 2 218 THR 2 229 -1 O LEU 2 220 N TRP 2 80 SHEET 4 AB1 5 SER 2 119 VAL 2 126 -1 N CYS 2 121 O ILE 2 225 SHEET 5 AB1 5 HIS 2 186 ASN 2 190 -1 O GLN 2 187 N VAL 2 124 SHEET 1 AB2 4 GLN 3 79 ASN 3 84 0 SHEET 2 AB2 4 PHE 3 186 ILE 3 196 -1 O CYS 3 189 N VAL 3 80 SHEET 3 AB2 4 SER 3 124 THR 3 132 -1 N SER 3 124 O ILE 3 196 SHEET 4 AB2 4 THR 3 149 ASP 3 154 -1 O TRP 3 153 N LEU 3 127 SHEET 1 AB3 3 ARG 3 174 TYR 3 175 0 SHEET 2 AB3 3 TYR 3 104 SER 3 108 -1 N TRP 3 107 O ARG 3 174 SHEET 3 AB3 3 LYS 3 218 MET 3 222 -1 O LYS 3 218 N SER 3 108 CISPEP 1 LEU 2 82 PRO 2 83 0 -0.43 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000