data_7NXM # _entry.id 7NXM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7NXM pdb_00007nxm 10.2210/pdb7nxm/pdb WWPDB D_1292114281 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-09-08 2 'Structure model' 1 1 2021-10-13 3 'Structure model' 1 2 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' pdbx_database_proc 4 3 'Structure model' chem_comp_atom 5 3 'Structure model' chem_comp_bond 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_DOI' 5 2 'Structure model' '_citation.pdbx_database_id_PubMed' 6 2 'Structure model' '_citation.title' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7NXM _pdbx_database_status.recvd_initial_deposition_date 2021-03-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Busa, M.' 1 0000-0002-4750-5992 'Benysek, J.' 2 0000-0002-2369-0775 'Lemke, C.' 3 0000-0003-4638-3396 'Gutschow, M.' 4 0000-0002-9376-7897 'Mares, M.' 5 0000-0002-0847-5022 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 64 _citation.language ? _citation.page_first 13793 _citation.page_last 13806 _citation.title 'An Activity-Based Probe for Cathepsin K Imaging with Excellent Potency and Selectivity.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.1c01178 _citation.pdbx_database_id_PubMed 34473502 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lemke, C.' 1 ? primary 'Benysek, J.' 2 ? primary 'Brajtenbach, D.' 3 ? primary 'Breuer, C.' 4 ? primary 'Jilkova, A.' 5 ? primary 'Horn, M.' 6 0000-0001-9110-2018 primary 'Busa, M.' 7 ? primary 'Ulrychova, L.' 8 ? primary 'Illies, A.' 9 ? primary 'Kubatzky, K.F.' 10 ? primary 'Bartz, U.' 11 ? primary 'Mares, M.' 12 0000-0002-0847-5022 primary 'Gutschow, M.' 13 0000-0002-9376-7897 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cathepsin K' 23680.674 1 3.4.22.38 ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn 'N-(4-(dibenzylamino)-4-oxobutyl)-2-(5-(dimethylamino)pentanamido)-4-methylpentanamide' 522.722 1 ? ? ? ? 4 water nat water 18.015 184 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cathepsin O,Cathepsin O2,Cathepsin X' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;RAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNR GIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDN LNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM ; _entity_poly.pdbx_seq_one_letter_code_can ;RAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNR GIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDN LNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'N-(4-(dibenzylamino)-4-oxobutyl)-2-(5-(dimethylamino)pentanamido)-4-methylpentanamide' UUW 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 ALA n 1 3 PRO n 1 4 ASP n 1 5 SER n 1 6 VAL n 1 7 ASP n 1 8 TYR n 1 9 ARG n 1 10 LYS n 1 11 LYS n 1 12 GLY n 1 13 TYR n 1 14 VAL n 1 15 THR n 1 16 PRO n 1 17 VAL n 1 18 LYS n 1 19 ASN n 1 20 GLN n 1 21 GLY n 1 22 GLN n 1 23 CYS n 1 24 GLY n 1 25 SER n 1 26 CYS n 1 27 TRP n 1 28 ALA n 1 29 PHE n 1 30 SER n 1 31 SER n 1 32 VAL n 1 33 GLY n 1 34 ALA n 1 35 LEU n 1 36 GLU n 1 37 GLY n 1 38 GLN n 1 39 LEU n 1 40 LYS n 1 41 LYS n 1 42 LYS n 1 43 THR n 1 44 GLY n 1 45 LYS n 1 46 LEU n 1 47 LEU n 1 48 ASN n 1 49 LEU n 1 50 SER n 1 51 PRO n 1 52 GLN n 1 53 ASN n 1 54 LEU n 1 55 VAL n 1 56 ASP n 1 57 CYS n 1 58 VAL n 1 59 SER n 1 60 GLU n 1 61 ASN n 1 62 ASP n 1 63 GLY n 1 64 CYS n 1 65 GLY n 1 66 GLY n 1 67 GLY n 1 68 TYR n 1 69 MET n 1 70 THR n 1 71 ASN n 1 72 ALA n 1 73 PHE n 1 74 GLN n 1 75 TYR n 1 76 VAL n 1 77 GLN n 1 78 LYS n 1 79 ASN n 1 80 ARG n 1 81 GLY n 1 82 ILE n 1 83 ASP n 1 84 SER n 1 85 GLU n 1 86 ASP n 1 87 ALA n 1 88 TYR n 1 89 PRO n 1 90 TYR n 1 91 VAL n 1 92 GLY n 1 93 GLN n 1 94 GLU n 1 95 GLU n 1 96 SER n 1 97 CYS n 1 98 MET n 1 99 TYR n 1 100 ASN n 1 101 PRO n 1 102 THR n 1 103 GLY n 1 104 LYS n 1 105 ALA n 1 106 ALA n 1 107 LYS n 1 108 CYS n 1 109 ARG n 1 110 GLY n 1 111 TYR n 1 112 ARG n 1 113 GLU n 1 114 ILE n 1 115 PRO n 1 116 GLU n 1 117 GLY n 1 118 ASN n 1 119 GLU n 1 120 LYS n 1 121 ALA n 1 122 LEU n 1 123 LYS n 1 124 ARG n 1 125 ALA n 1 126 VAL n 1 127 ALA n 1 128 ARG n 1 129 VAL n 1 130 GLY n 1 131 PRO n 1 132 VAL n 1 133 SER n 1 134 VAL n 1 135 ALA n 1 136 ILE n 1 137 ASP n 1 138 ALA n 1 139 SER n 1 140 LEU n 1 141 THR n 1 142 SER n 1 143 PHE n 1 144 GLN n 1 145 PHE n 1 146 TYR n 1 147 SER n 1 148 LYS n 1 149 GLY n 1 150 VAL n 1 151 TYR n 1 152 TYR n 1 153 ASP n 1 154 GLU n 1 155 SER n 1 156 CYS n 1 157 ASN n 1 158 SER n 1 159 ASP n 1 160 ASN n 1 161 LEU n 1 162 ASN n 1 163 HIS n 1 164 ALA n 1 165 VAL n 1 166 LEU n 1 167 ALA n 1 168 VAL n 1 169 GLY n 1 170 TYR n 1 171 GLY n 1 172 ILE n 1 173 GLN n 1 174 LYS n 1 175 GLY n 1 176 ASN n 1 177 LYS n 1 178 HIS n 1 179 TRP n 1 180 ILE n 1 181 ILE n 1 182 LYS n 1 183 ASN n 1 184 SER n 1 185 TRP n 1 186 GLY n 1 187 GLU n 1 188 ASN n 1 189 TRP n 1 190 GLY n 1 191 ASN n 1 192 LYS n 1 193 GLY n 1 194 TYR n 1 195 ILE n 1 196 LEU n 1 197 MET n 1 198 ALA n 1 199 ARG n 1 200 ASN n 1 201 LYS n 1 202 ASN n 1 203 ASN n 1 204 ALA n 1 205 CYS n 1 206 GLY n 1 207 ILE n 1 208 ALA n 1 209 ASN n 1 210 LEU n 1 211 ALA n 1 212 SER n 1 213 PHE n 1 214 PRO n 1 215 LYS n 1 216 MET n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 216 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CTSK, CTSO, CTSO2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Komagataella phaffii GS115' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 644223 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UUW non-polymer . 'N-(4-(dibenzylamino)-4-oxobutyl)-2-(5-(dimethylamino)pentanamido)-4-methylpentanamide' ;(2~{S})-~{N}-[4-[bis(phenylmethyl)amino]-4-oxidanylidene-butyl]-2-[5-(dimethylamino)pentanoylamino]-4-methyl-pentanamide; activity-based probe Gu3416; (2S)-N-[4-[bis(phenylmethyl)amino]-4-oxidanylidene-butyl]-2-[5-(dimethylamino)pentanoylamino]-4-methyl-pentanamide ; 'C31 H46 N4 O3' 522.722 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 0 0 ARG ARG A . n A 1 2 ALA 2 1 1 ALA ALA A . n A 1 3 PRO 3 2 2 PRO PRO A . n A 1 4 ASP 4 3 3 ASP ASP A . n A 1 5 SER 5 4 4 SER SER A . n A 1 6 VAL 6 5 5 VAL VAL A . n A 1 7 ASP 7 6 6 ASP ASP A . n A 1 8 TYR 8 7 7 TYR TYR A . n A 1 9 ARG 9 8 8 ARG ARG A . n A 1 10 LYS 10 9 9 LYS LYS A . n A 1 11 LYS 11 10 10 LYS LYS A . n A 1 12 GLY 12 11 11 GLY GLY A . n A 1 13 TYR 13 12 12 TYR TYR A . n A 1 14 VAL 14 13 13 VAL VAL A . n A 1 15 THR 15 14 14 THR THR A . n A 1 16 PRO 16 15 15 PRO PRO A . n A 1 17 VAL 17 16 16 VAL VAL A . n A 1 18 LYS 18 17 17 LYS LYS A . n A 1 19 ASN 19 18 18 ASN ASN A . n A 1 20 GLN 20 19 19 GLN GLN A . n A 1 21 GLY 21 20 20 GLY GLY A . n A 1 22 GLN 22 21 21 GLN GLN A . n A 1 23 CYS 23 22 22 CYS CYS A . n A 1 24 GLY 24 23 23 GLY GLY A . n A 1 25 SER 25 24 24 SER SER A . n A 1 26 CYS 26 25 25 CYS CYS A . n A 1 27 TRP 27 26 26 TRP TRP A . n A 1 28 ALA 28 27 27 ALA ALA A . n A 1 29 PHE 29 28 28 PHE PHE A . n A 1 30 SER 30 29 29 SER SER A . n A 1 31 SER 31 30 30 SER SER A . n A 1 32 VAL 32 31 31 VAL VAL A . n A 1 33 GLY 33 32 32 GLY GLY A . n A 1 34 ALA 34 33 33 ALA ALA A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 GLU 36 35 35 GLU GLU A . n A 1 37 GLY 37 36 36 GLY GLY A . n A 1 38 GLN 38 37 37 GLN GLN A . n A 1 39 LEU 39 38 38 LEU LEU A . n A 1 40 LYS 40 39 39 LYS LYS A . n A 1 41 LYS 41 40 40 LYS LYS A . n A 1 42 LYS 42 41 41 LYS LYS A . n A 1 43 THR 43 42 42 THR THR A . n A 1 44 GLY 44 43 43 GLY GLY A . n A 1 45 LYS 45 44 44 LYS LYS A . n A 1 46 LEU 46 45 45 LEU LEU A . n A 1 47 LEU 47 46 46 LEU LEU A . n A 1 48 ASN 48 47 47 ASN ASN A . n A 1 49 LEU 49 48 48 LEU LEU A . n A 1 50 SER 50 49 49 SER SER A . n A 1 51 PRO 51 50 50 PRO PRO A . n A 1 52 GLN 52 51 51 GLN GLN A . n A 1 53 ASN 53 52 52 ASN ASN A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 VAL 55 54 54 VAL VAL A . n A 1 56 ASP 56 55 55 ASP ASP A . n A 1 57 CYS 57 56 56 CYS CYS A . n A 1 58 VAL 58 57 57 VAL VAL A . n A 1 59 SER 59 58 58 SER SER A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 ASN 61 60 60 ASN ASN A . n A 1 62 ASP 62 61 61 ASP ASP A . n A 1 63 GLY 63 62 62 GLY GLY A . n A 1 64 CYS 64 63 63 CYS CYS A . n A 1 65 GLY 65 64 64 GLY GLY A . n A 1 66 GLY 66 65 65 GLY GLY A . n A 1 67 GLY 67 66 66 GLY GLY A . n A 1 68 TYR 68 67 67 TYR TYR A . n A 1 69 MET 69 68 68 MET MET A . n A 1 70 THR 70 69 69 THR THR A . n A 1 71 ASN 71 70 70 ASN ASN A . n A 1 72 ALA 72 71 71 ALA ALA A . n A 1 73 PHE 73 72 72 PHE PHE A . n A 1 74 GLN 74 73 73 GLN GLN A . n A 1 75 TYR 75 74 74 TYR TYR A . n A 1 76 VAL 76 75 75 VAL VAL A . n A 1 77 GLN 77 76 76 GLN GLN A . n A 1 78 LYS 78 77 77 LYS LYS A . n A 1 79 ASN 79 78 78 ASN ASN A . n A 1 80 ARG 80 79 79 ARG ARG A . n A 1 81 GLY 81 80 80 GLY GLY A . n A 1 82 ILE 82 81 81 ILE ILE A . n A 1 83 ASP 83 82 82 ASP ASP A . n A 1 84 SER 84 83 83 SER SER A . n A 1 85 GLU 85 84 84 GLU GLU A . n A 1 86 ASP 86 85 85 ASP ASP A . n A 1 87 ALA 87 86 86 ALA ALA A . n A 1 88 TYR 88 87 87 TYR TYR A . n A 1 89 PRO 89 88 88 PRO PRO A . n A 1 90 TYR 90 89 89 TYR TYR A . n A 1 91 VAL 91 90 90 VAL VAL A . n A 1 92 GLY 92 91 91 GLY GLY A . n A 1 93 GLN 93 92 92 GLN GLN A . n A 1 94 GLU 94 93 93 GLU GLU A . n A 1 95 GLU 95 94 94 GLU GLU A . n A 1 96 SER 96 95 95 SER SER A . n A 1 97 CYS 97 96 96 CYS CYS A . n A 1 98 MET 98 97 97 MET MET A . n A 1 99 TYR 99 98 98 TYR TYR A . n A 1 100 ASN 100 99 99 ASN ASN A . n A 1 101 PRO 101 100 100 PRO PRO A . n A 1 102 THR 102 101 101 THR THR A . n A 1 103 GLY 103 102 102 GLY GLY A . n A 1 104 LYS 104 103 103 LYS LYS A . n A 1 105 ALA 105 104 104 ALA ALA A . n A 1 106 ALA 106 105 105 ALA ALA A . n A 1 107 LYS 107 106 106 LYS LYS A . n A 1 108 CYS 108 107 107 CYS CYS A . n A 1 109 ARG 109 108 108 ARG ARG A . n A 1 110 GLY 110 109 109 GLY GLY A . n A 1 111 TYR 111 110 110 TYR TYR A . n A 1 112 ARG 112 111 111 ARG ARG A . n A 1 113 GLU 113 112 112 GLU GLU A . n A 1 114 ILE 114 113 113 ILE ILE A . n A 1 115 PRO 115 114 114 PRO PRO A . n A 1 116 GLU 116 115 115 GLU GLU A . n A 1 117 GLY 117 116 116 GLY GLY A . n A 1 118 ASN 118 117 117 ASN ASN A . n A 1 119 GLU 119 118 118 GLU GLU A . n A 1 120 LYS 120 119 119 LYS LYS A . n A 1 121 ALA 121 120 120 ALA ALA A . n A 1 122 LEU 122 121 121 LEU LEU A . n A 1 123 LYS 123 122 122 LYS LYS A . n A 1 124 ARG 124 123 123 ARG ARG A . n A 1 125 ALA 125 124 124 ALA ALA A . n A 1 126 VAL 126 125 125 VAL VAL A . n A 1 127 ALA 127 126 126 ALA ALA A . n A 1 128 ARG 128 127 127 ARG ARG A . n A 1 129 VAL 129 128 128 VAL VAL A . n A 1 130 GLY 130 129 129 GLY GLY A . n A 1 131 PRO 131 130 130 PRO PRO A . n A 1 132 VAL 132 131 131 VAL VAL A . n A 1 133 SER 133 132 132 SER SER A . n A 1 134 VAL 134 133 133 VAL VAL A . n A 1 135 ALA 135 134 134 ALA ALA A . n A 1 136 ILE 136 135 135 ILE ILE A . n A 1 137 ASP 137 136 136 ASP ASP A . n A 1 138 ALA 138 137 137 ALA ALA A . n A 1 139 SER 139 138 138 SER SER A . n A 1 140 LEU 140 139 139 LEU LEU A . n A 1 141 THR 141 140 140 THR THR A . n A 1 142 SER 142 141 141 SER SER A . n A 1 143 PHE 143 142 142 PHE PHE A . n A 1 144 GLN 144 143 143 GLN GLN A . n A 1 145 PHE 145 144 144 PHE PHE A . n A 1 146 TYR 146 145 145 TYR TYR A . n A 1 147 SER 147 146 146 SER SER A . n A 1 148 LYS 148 147 147 LYS LYS A . n A 1 149 GLY 149 148 148 GLY GLY A . n A 1 150 VAL 150 149 149 VAL VAL A . n A 1 151 TYR 151 150 150 TYR TYR A . n A 1 152 TYR 152 151 151 TYR TYR A . n A 1 153 ASP 153 152 152 ASP ASP A . n A 1 154 GLU 154 153 153 GLU GLU A . n A 1 155 SER 155 154 154 SER SER A . n A 1 156 CYS 156 155 155 CYS CYS A . n A 1 157 ASN 157 156 156 ASN ASN A . n A 1 158 SER 158 157 157 SER SER A . n A 1 159 ASP 159 158 158 ASP ASP A . n A 1 160 ASN 160 159 159 ASN ASN A . n A 1 161 LEU 161 160 160 LEU LEU A . n A 1 162 ASN 162 161 161 ASN ASN A . n A 1 163 HIS 163 162 162 HIS HIS A . n A 1 164 ALA 164 163 163 ALA ALA A . n A 1 165 VAL 165 164 164 VAL VAL A . n A 1 166 LEU 166 165 165 LEU LEU A . n A 1 167 ALA 167 166 166 ALA ALA A . n A 1 168 VAL 168 167 167 VAL VAL A . n A 1 169 GLY 169 168 168 GLY GLY A . n A 1 170 TYR 170 169 169 TYR TYR A . n A 1 171 GLY 171 170 170 GLY GLY A . n A 1 172 ILE 172 171 171 ILE ILE A . n A 1 173 GLN 173 172 172 GLN GLN A . n A 1 174 LYS 174 173 173 LYS LYS A . n A 1 175 GLY 175 174 174 GLY GLY A . n A 1 176 ASN 176 175 175 ASN ASN A . n A 1 177 LYS 177 176 176 LYS LYS A . n A 1 178 HIS 178 177 177 HIS HIS A . n A 1 179 TRP 179 178 178 TRP TRP A . n A 1 180 ILE 180 179 179 ILE ILE A . n A 1 181 ILE 181 180 180 ILE ILE A . n A 1 182 LYS 182 181 181 LYS LYS A . n A 1 183 ASN 183 182 182 ASN ASN A . n A 1 184 SER 184 183 183 SER SER A . n A 1 185 TRP 185 184 184 TRP TRP A . n A 1 186 GLY 186 185 185 GLY GLY A . n A 1 187 GLU 187 186 186 GLU GLU A . n A 1 188 ASN 188 187 187 ASN ASN A . n A 1 189 TRP 189 188 188 TRP TRP A . n A 1 190 GLY 190 189 189 GLY GLY A . n A 1 191 ASN 191 190 190 ASN ASN A . n A 1 192 LYS 192 191 191 LYS LYS A . n A 1 193 GLY 193 192 192 GLY GLY A . n A 1 194 TYR 194 193 193 TYR TYR A . n A 1 195 ILE 195 194 194 ILE ILE A . n A 1 196 LEU 196 195 195 LEU LEU A . n A 1 197 MET 197 196 196 MET MET A . n A 1 198 ALA 198 197 197 ALA ALA A . n A 1 199 ARG 199 198 198 ARG ARG A . n A 1 200 ASN 200 199 199 ASN ASN A . n A 1 201 LYS 201 200 200 LYS LYS A . n A 1 202 ASN 202 201 201 ASN ASN A . n A 1 203 ASN 203 202 202 ASN ASN A . n A 1 204 ALA 204 203 203 ALA ALA A . n A 1 205 CYS 205 204 204 CYS CYS A . n A 1 206 GLY 206 205 205 GLY GLY A . n A 1 207 ILE 207 206 206 ILE ILE A . n A 1 208 ALA 208 207 207 ALA ALA A . n A 1 209 ASN 209 208 208 ASN ASN A . n A 1 210 LEU 210 209 209 LEU LEU A . n A 1 211 ALA 211 210 210 ALA ALA A . n A 1 212 SER 212 211 211 SER SER A . n A 1 213 PHE 213 212 212 PHE PHE A . n A 1 214 PRO 214 213 213 PRO PRO A . n A 1 215 LYS 215 214 214 LYS LYS A . n A 1 216 MET 216 215 215 MET MET A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 301 301 SO4 SO4 A . C 3 UUW 1 302 701 UUW DRG A . D 4 HOH 1 401 176 HOH HOH A . D 4 HOH 2 402 138 HOH HOH A . D 4 HOH 3 403 175 HOH HOH A . D 4 HOH 4 404 168 HOH HOH A . D 4 HOH 5 405 67 HOH HOH A . D 4 HOH 6 406 188 HOH HOH A . D 4 HOH 7 407 203 HOH HOH A . D 4 HOH 8 408 199 HOH HOH A . D 4 HOH 9 409 25 HOH HOH A . D 4 HOH 10 410 75 HOH HOH A . D 4 HOH 11 411 202 HOH HOH A . D 4 HOH 12 412 51 HOH HOH A . D 4 HOH 13 413 114 HOH HOH A . D 4 HOH 14 414 189 HOH HOH A . D 4 HOH 15 415 64 HOH HOH A . D 4 HOH 16 416 71 HOH HOH A . D 4 HOH 17 417 105 HOH HOH A . D 4 HOH 18 418 135 HOH HOH A . D 4 HOH 19 419 205 HOH HOH A . D 4 HOH 20 420 118 HOH HOH A . D 4 HOH 21 421 72 HOH HOH A . D 4 HOH 22 422 37 HOH HOH A . D 4 HOH 23 423 109 HOH HOH A . D 4 HOH 24 424 196 HOH HOH A . D 4 HOH 25 425 158 HOH HOH A . D 4 HOH 26 426 140 HOH HOH A . D 4 HOH 27 427 86 HOH HOH A . D 4 HOH 28 428 76 HOH HOH A . D 4 HOH 29 429 7 HOH HOH A . D 4 HOH 30 430 161 HOH HOH A . D 4 HOH 31 431 10 HOH HOH A . D 4 HOH 32 432 81 HOH HOH A . D 4 HOH 33 433 78 HOH HOH A . D 4 HOH 34 434 192 HOH HOH A . D 4 HOH 35 435 160 HOH HOH A . D 4 HOH 36 436 103 HOH HOH A . D 4 HOH 37 437 8 HOH HOH A . D 4 HOH 38 438 69 HOH HOH A . D 4 HOH 39 439 178 HOH HOH A . D 4 HOH 40 440 55 HOH HOH A . D 4 HOH 41 441 23 HOH HOH A . D 4 HOH 42 442 28 HOH HOH A . D 4 HOH 43 443 92 HOH HOH A . D 4 HOH 44 444 19 HOH HOH A . D 4 HOH 45 445 132 HOH HOH A . D 4 HOH 46 446 42 HOH HOH A . D 4 HOH 47 447 85 HOH HOH A . D 4 HOH 48 448 18 HOH HOH A . D 4 HOH 49 449 31 HOH HOH A . D 4 HOH 50 450 20 HOH HOH A . D 4 HOH 51 451 127 HOH HOH A . D 4 HOH 52 452 11 HOH HOH A . D 4 HOH 53 453 194 HOH HOH A . D 4 HOH 54 454 29 HOH HOH A . D 4 HOH 55 455 101 HOH HOH A . D 4 HOH 56 456 100 HOH HOH A . D 4 HOH 57 457 210 HOH HOH A . D 4 HOH 58 458 53 HOH HOH A . D 4 HOH 59 459 33 HOH HOH A . D 4 HOH 60 460 59 HOH HOH A . D 4 HOH 61 461 14 HOH HOH A . D 4 HOH 62 462 107 HOH HOH A . D 4 HOH 63 463 38 HOH HOH A . D 4 HOH 64 464 41 HOH HOH A . D 4 HOH 65 465 167 HOH HOH A . D 4 HOH 66 466 124 HOH HOH A . D 4 HOH 67 467 70 HOH HOH A . D 4 HOH 68 468 171 HOH HOH A . D 4 HOH 69 469 44 HOH HOH A . D 4 HOH 70 470 126 HOH HOH A . D 4 HOH 71 471 207 HOH HOH A . D 4 HOH 72 472 88 HOH HOH A . D 4 HOH 73 473 108 HOH HOH A . D 4 HOH 74 474 68 HOH HOH A . D 4 HOH 75 475 3 HOH HOH A . D 4 HOH 76 476 190 HOH HOH A . D 4 HOH 77 477 36 HOH HOH A . D 4 HOH 78 478 39 HOH HOH A . D 4 HOH 79 479 82 HOH HOH A . D 4 HOH 80 480 157 HOH HOH A . D 4 HOH 81 481 117 HOH HOH A . D 4 HOH 82 482 12 HOH HOH A . D 4 HOH 83 483 79 HOH HOH A . D 4 HOH 84 484 32 HOH HOH A . D 4 HOH 85 485 174 HOH HOH A . D 4 HOH 86 486 61 HOH HOH A . D 4 HOH 87 487 84 HOH HOH A . D 4 HOH 88 488 15 HOH HOH A . D 4 HOH 89 489 119 HOH HOH A . D 4 HOH 90 490 35 HOH HOH A . D 4 HOH 91 491 45 HOH HOH A . D 4 HOH 92 492 17 HOH HOH A . D 4 HOH 93 493 166 HOH HOH A . D 4 HOH 94 494 83 HOH HOH A . D 4 HOH 95 495 134 HOH HOH A . D 4 HOH 96 496 16 HOH HOH A . D 4 HOH 97 497 58 HOH HOH A . D 4 HOH 98 498 74 HOH HOH A . D 4 HOH 99 499 34 HOH HOH A . D 4 HOH 100 500 89 HOH HOH A . D 4 HOH 101 501 77 HOH HOH A . D 4 HOH 102 502 201 HOH HOH A . D 4 HOH 103 503 91 HOH HOH A . D 4 HOH 104 504 27 HOH HOH A . D 4 HOH 105 505 46 HOH HOH A . D 4 HOH 106 506 63 HOH HOH A . D 4 HOH 107 507 147 HOH HOH A . D 4 HOH 108 508 43 HOH HOH A . D 4 HOH 109 509 65 HOH HOH A . D 4 HOH 110 510 52 HOH HOH A . D 4 HOH 111 511 137 HOH HOH A . D 4 HOH 112 512 30 HOH HOH A . D 4 HOH 113 513 125 HOH HOH A . D 4 HOH 114 514 115 HOH HOH A . D 4 HOH 115 515 141 HOH HOH A . D 4 HOH 116 516 57 HOH HOH A . D 4 HOH 117 517 93 HOH HOH A . D 4 HOH 118 518 143 HOH HOH A . D 4 HOH 119 519 112 HOH HOH A . D 4 HOH 120 520 197 HOH HOH A . D 4 HOH 121 521 2 HOH HOH A . D 4 HOH 122 522 111 HOH HOH A . D 4 HOH 123 523 56 HOH HOH A . D 4 HOH 124 524 169 HOH HOH A . D 4 HOH 125 525 6 HOH HOH A . D 4 HOH 126 526 5 HOH HOH A . D 4 HOH 127 527 40 HOH HOH A . D 4 HOH 128 528 87 HOH HOH A . D 4 HOH 129 529 152 HOH HOH A . D 4 HOH 130 530 142 HOH HOH A . D 4 HOH 131 531 122 HOH HOH A . D 4 HOH 132 532 104 HOH HOH A . D 4 HOH 133 533 62 HOH HOH A . D 4 HOH 134 534 13 HOH HOH A . D 4 HOH 135 535 155 HOH HOH A . D 4 HOH 136 536 154 HOH HOH A . D 4 HOH 137 537 22 HOH HOH A . D 4 HOH 138 538 151 HOH HOH A . D 4 HOH 139 539 200 HOH HOH A . D 4 HOH 140 540 162 HOH HOH A . D 4 HOH 141 541 116 HOH HOH A . D 4 HOH 142 542 21 HOH HOH A . D 4 HOH 143 543 165 HOH HOH A . D 4 HOH 144 544 177 HOH HOH A . D 4 HOH 145 545 24 HOH HOH A . D 4 HOH 146 546 195 HOH HOH A . D 4 HOH 147 547 136 HOH HOH A . D 4 HOH 148 548 185 HOH HOH A . D 4 HOH 149 549 191 HOH HOH A . D 4 HOH 150 550 80 HOH HOH A . D 4 HOH 151 551 49 HOH HOH A . D 4 HOH 152 552 9 HOH HOH A . D 4 HOH 153 553 26 HOH HOH A . D 4 HOH 154 554 209 HOH HOH A . D 4 HOH 155 555 133 HOH HOH A . D 4 HOH 156 556 66 HOH HOH A . D 4 HOH 157 557 144 HOH HOH A . D 4 HOH 158 558 159 HOH HOH A . D 4 HOH 159 559 173 HOH HOH A . D 4 HOH 160 560 94 HOH HOH A . D 4 HOH 161 561 156 HOH HOH A . D 4 HOH 162 562 198 HOH HOH A . D 4 HOH 163 563 148 HOH HOH A . D 4 HOH 164 564 186 HOH HOH A . D 4 HOH 165 565 145 HOH HOH A . D 4 HOH 166 566 181 HOH HOH A . D 4 HOH 167 567 4 HOH HOH A . D 4 HOH 168 568 97 HOH HOH A . D 4 HOH 169 569 193 HOH HOH A . D 4 HOH 170 570 95 HOH HOH A . D 4 HOH 171 571 130 HOH HOH A . D 4 HOH 172 572 150 HOH HOH A . D 4 HOH 173 573 184 HOH HOH A . D 4 HOH 174 574 128 HOH HOH A . D 4 HOH 175 575 121 HOH HOH A . D 4 HOH 176 576 153 HOH HOH A . D 4 HOH 177 577 110 HOH HOH A . D 4 HOH 178 578 180 HOH HOH A . D 4 HOH 179 579 182 HOH HOH A . D 4 HOH 180 580 139 HOH HOH A . D 4 HOH 181 581 179 HOH HOH A . D 4 HOH 182 582 183 HOH HOH A . D 4 HOH 183 583 129 HOH HOH A . D 4 HOH 184 584 208 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 147 ? CG ? A LYS 148 CG 2 1 Y 1 A LYS 147 ? CD ? A LYS 148 CD 3 1 Y 1 A LYS 147 ? CE ? A LYS 148 CE 4 1 Y 1 A LYS 147 ? NZ ? A LYS 148 NZ 5 1 Y 1 A LYS 191 ? CG ? A LYS 192 CG 6 1 Y 1 A LYS 191 ? CD ? A LYS 192 CD 7 1 Y 1 A LYS 191 ? CE ? A LYS 192 CE 8 1 Y 1 A LYS 191 ? NZ ? A LYS 192 NZ 9 1 N 1 A UUW 302 ? C8 ? C UUW 1 C8 10 1 N 1 A UUW 302 ? C9 ? C UUW 1 C9 11 1 N 1 A UUW 302 ? C10 ? C UUW 1 C10 12 1 N 1 A UUW 302 ? N2 ? C UUW 1 N2 13 1 N 1 A UUW 302 ? C11 ? C UUW 1 C11 14 1 N 1 A UUW 302 ? C12 ? C UUW 1 C12 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7NXM _cell.details ? _cell.formula_units_Z ? _cell.length_a 32.045 _cell.length_a_esd ? _cell.length_b 71.677 _cell.length_b_esd ? _cell.length_c 80.856 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NXM _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7NXM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.963 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 37.38 _exptl_crystal.description 'Orthorhombic crystals' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Composition of reservoir solution was 0.1 M MES/imidazole buffer, containing: 12.5% w/v PEG 1000, 12.5% w/v PEG 3350, 12.5% v/v MPD 0.03 M of each NPS (a mix containing sodium nitrate, disodium hydrogen phosphate and ammonium sulfate) additives, pH 6.5. Morpheus C4 condition ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 300K' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-03-05 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator M _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.541870 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.541870 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7NXM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.72 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17548 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 85.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.8 _reflns.pdbx_Rmerge_I_obs 0.061 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 15.81 _reflns.pdbx_netI_over_sigmaI 27.18 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.89 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.079 _reflns.pdbx_Rpim_I_all 0.05 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 1.72 1.75 ? 1.4 ? ? ? ? 153 14.8 ? ? ? ? 0.423 ? ? ? ? ? ? ? ? 1.3 ? 0.58 ? ? 0.598 0.423 ? 1 1 0.678 ? ? ? ? ? ? ? ? ? ? 1.8 1.84 ? 3.1 ? ? ? ? 772 74.9 ? ? ? ? 0.286 ? ? ? ? ? ? ? ? 2.8 ? 0.76 ? ? 0.397 0.274 ? 2 1 0.881 ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] 0.356 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][2] -1.202 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] 0.846 _refine.B_iso_max ? _refine.B_iso_mean 17.819 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.961 _refine.correlation_coeff_Fo_to_Fc_free 0.951 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7NXM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.720 _refine.ls_d_res_low 35.86 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 17510 _refine.ls_number_reflns_R_free 895 _refine.ls_number_reflns_R_work 16615 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 85.340 _refine.ls_percent_reflns_R_free 5.111 _refine.ls_R_factor_all 0.161 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.1784 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1602 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5TDI _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.137 _refine.pdbx_overall_ESU_R_Free 0.112 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.167 _refine.overall_SU_ML 0.069 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.720 _refine_hist.d_res_low 35.86 _refine_hist.number_atoms_solvent 184 _refine_hist.number_atoms_total 1873 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1652 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 37 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 0.013 1776 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.018 1640 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.633 1.640 2408 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.465 1.589 3778 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.896 5.000 231 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.746 22.632 95 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 12.423 15.000 293 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 13.112 15.000 1 ? r_dihedral_angle_other_3_deg ? ? 'X-RAY DIFFRACTION' ? 17.225 15.000 10 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.085 0.200 215 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 0.020 2104 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 440 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.209 0.200 349 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.189 0.200 1535 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.175 0.200 871 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.084 0.200 775 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.153 0.200 130 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.141 0.200 7 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.167 0.200 37 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.223 0.200 7 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 1.675 1.598 879 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.661 1.596 878 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.377 2.387 1101 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.380 2.389 1102 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.579 2.014 897 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 2.578 2.016 898 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 3.850 2.880 1299 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 3.849 2.882 1300 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 5.280 19.976 2065 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 5.140 19.745 2043 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.720 1.765 . . 20 272 19.6369 . . . 0.409 . 0.256 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.765 1.813 . . 46 771 56.9338 . . . 0.241 . 0.247 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.813 1.866 . . 66 1050 78.4259 . . . 0.267 . 0.203 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.866 1.923 . . 68 1078 84.0176 . . . 0.174 . 0.175 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.923 1.986 . . 47 1107 86.5716 . . . 0.143 . 0.151 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.986 2.056 . . 67 1113 91.2606 . . . 0.214 . 0.161 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.056 2.133 . . 61 1118 93.2016 . . . 0.137 . 0.145 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.133 2.220 . . 54 1104 98.2188 . . . 0.160 . 0.136 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.220 2.319 . . 65 1065 96.7466 . . . 0.124 . 0.138 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.319 2.432 . . 65 1023 99.2701 . . . 0.204 . 0.150 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.432 2.563 . . 48 991 97.2846 . . . 0.155 . 0.154 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.563 2.719 . . 42 943 97.0443 . . . 0.165 . 0.167 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.719 2.906 . . 44 889 98.5217 . . . 0.234 . 0.165 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.906 3.139 . . 43 817 98.1735 . . . 0.175 . 0.152 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.139 3.438 . . 35 763 98.2759 . . . 0.255 . 0.164 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.438 3.843 . . 42 678 94.9868 . . . 0.145 . 0.148 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.843 4.435 . . 31 563 89.1892 . . . 0.144 . 0.140 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.435 5.428 . . 22 564 100.0000 . . . 0.200 . 0.164 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.428 7.659 . . 18 435 100.0000 . . . 0.186 . 0.203 . . . . . . . . . . . 'X-RAY DIFFRACTION' 7.659 35.86 . . 11 271 98.9474 . . . 0.145 . 0.180 . . . . . . . . . . . # _struct.entry_id 7NXM _struct.title 'Structure of human cathepsin K in complex with the selective activity-based probe Gu3416' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7NXM _struct_keywords.text 'hydrolase, inhibitor, complex, activity-based probe, acrylamide inhibitor' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CATK_HUMAN _struct_ref.pdbx_db_accession P43235 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNR GIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDN LNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM ; _struct_ref.pdbx_align_begin 114 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7NXM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 216 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P43235 _struct_ref_seq.db_align_beg 114 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 329 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 215 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 150 ? 1 MORE -8 ? 1 'SSA (A^2)' 9850 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 25 ? GLY A 44 ? SER A 24 GLY A 43 1 ? 20 HELX_P HELX_P2 AA2 SER A 50 ? VAL A 58 ? SER A 49 VAL A 57 1 ? 9 HELX_P HELX_P3 AA3 ASP A 62 ? GLY A 66 ? ASP A 61 GLY A 65 5 ? 5 HELX_P HELX_P4 AA4 TYR A 68 ? ARG A 80 ? TYR A 67 ARG A 79 1 ? 13 HELX_P HELX_P5 AA5 ASN A 100 ? THR A 102 ? ASN A 99 THR A 101 5 ? 3 HELX_P HELX_P6 AA6 ASN A 118 ? VAL A 129 ? ASN A 117 VAL A 128 1 ? 12 HELX_P HELX_P7 AA7 LEU A 140 ? PHE A 145 ? LEU A 139 PHE A 144 1 ? 6 HELX_P HELX_P8 AA8 ASN A 203 ? ILE A 207 ? ASN A 202 ILE A 206 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 64 SG ? ? A CYS 22 A CYS 63 1_555 ? ? ? ? ? ? ? 2.060 ? ? disulf2 disulf ? ? A CYS 57 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 56 A CYS 96 1_555 ? ? ? ? ? ? ? 2.110 ? ? disulf3 disulf ? ? A CYS 156 SG ? ? ? 1_555 A CYS 205 SG ? ? A CYS 155 A CYS 204 1_555 ? ? ? ? ? ? ? 2.057 ? ? covale1 covale none ? A CYS 26 SG ? ? ? 1_555 C UUW . C15 ? ? A CYS 25 A UUW 302 1_555 ? ? ? ? ? ? ? 1.778 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 5 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 6 ? ASP A 7 ? VAL A 5 ASP A 6 AA1 2 HIS A 163 ? GLN A 173 ? HIS A 162 GLN A 172 AA1 3 VAL A 132 ? ILE A 136 ? VAL A 131 ILE A 135 AA2 1 VAL A 6 ? ASP A 7 ? VAL A 5 ASP A 6 AA2 2 HIS A 163 ? GLN A 173 ? HIS A 162 GLN A 172 AA2 3 ASN A 176 ? LYS A 182 ? ASN A 175 LYS A 181 AA2 4 TYR A 194 ? ALA A 198 ? TYR A 193 ALA A 197 AA2 5 VAL A 150 ? TYR A 151 ? VAL A 149 TYR A 150 AA3 1 ILE A 82 ? ASP A 83 ? ILE A 81 ASP A 82 AA3 2 LYS A 104 ? ALA A 106 ? LYS A 103 ALA A 105 AA4 1 TYR A 111 ? GLU A 113 ? TYR A 110 GLU A 112 AA4 2 SER A 212 ? PRO A 214 ? SER A 211 PRO A 213 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 6 ? N VAL A 5 O TYR A 170 ? O TYR A 169 AA1 2 3 O ALA A 167 ? O ALA A 166 N VAL A 132 ? N VAL A 131 AA2 1 2 N VAL A 6 ? N VAL A 5 O TYR A 170 ? O TYR A 169 AA2 2 3 N LEU A 166 ? N LEU A 165 O LYS A 182 ? O LYS A 181 AA2 3 4 N TRP A 179 ? N TRP A 178 O MET A 197 ? O MET A 196 AA2 4 5 O LEU A 196 ? O LEU A 195 N TYR A 151 ? N TYR A 150 AA3 1 2 N ILE A 82 ? N ILE A 81 O ALA A 105 ? O ALA A 104 AA4 1 2 N ARG A 112 ? N ARG A 111 O PHE A 213 ? O PHE A 212 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 146 ? ? -126.48 -52.69 2 1 ASN A 159 ? ? -118.95 65.98 3 1 LYS A 200 ? ? -116.21 56.09 4 1 LEU A 209 ? ? -147.44 59.94 # _pdbx_entry_details.entry_id 7NXM _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 SO4 S S N N 304 SO4 O1 O N N 305 SO4 O2 O N N 306 SO4 O3 O N N 307 SO4 O4 O N N 308 THR N N N N 309 THR CA C N S 310 THR C C N N 311 THR O O N N 312 THR CB C N R 313 THR OG1 O N N 314 THR CG2 C N N 315 THR OXT O N N 316 THR H H N N 317 THR H2 H N N 318 THR HA H N N 319 THR HB H N N 320 THR HG1 H N N 321 THR HG21 H N N 322 THR HG22 H N N 323 THR HG23 H N N 324 THR HXT H N N 325 TRP N N N N 326 TRP CA C N S 327 TRP C C N N 328 TRP O O N N 329 TRP CB C N N 330 TRP CG C Y N 331 TRP CD1 C Y N 332 TRP CD2 C Y N 333 TRP NE1 N Y N 334 TRP CE2 C Y N 335 TRP CE3 C Y N 336 TRP CZ2 C Y N 337 TRP CZ3 C Y N 338 TRP CH2 C Y N 339 TRP OXT O N N 340 TRP H H N N 341 TRP H2 H N N 342 TRP HA H N N 343 TRP HB2 H N N 344 TRP HB3 H N N 345 TRP HD1 H N N 346 TRP HE1 H N N 347 TRP HE3 H N N 348 TRP HZ2 H N N 349 TRP HZ3 H N N 350 TRP HH2 H N N 351 TRP HXT H N N 352 TYR N N N N 353 TYR CA C N S 354 TYR C C N N 355 TYR O O N N 356 TYR CB C N N 357 TYR CG C Y N 358 TYR CD1 C Y N 359 TYR CD2 C Y N 360 TYR CE1 C Y N 361 TYR CE2 C Y N 362 TYR CZ C Y N 363 TYR OH O N N 364 TYR OXT O N N 365 TYR H H N N 366 TYR H2 H N N 367 TYR HA H N N 368 TYR HB2 H N N 369 TYR HB3 H N N 370 TYR HD1 H N N 371 TYR HD2 H N N 372 TYR HE1 H N N 373 TYR HE2 H N N 374 TYR HH H N N 375 TYR HXT H N N 376 UUW C4 C N N 377 UUW C14 C N N 378 UUW C5 C N S 379 UUW C6 C N N 380 UUW C7 C N N 381 UUW C8 C N N 382 UUW C13 C N N 383 UUW N1 N N N 384 UUW C3 C N N 385 UUW N3 N N N 386 UUW C1 C N N 387 UUW C2 C N N 388 UUW O1 O N N 389 UUW O2 O N N 390 UUW C15 C N N 391 UUW C16 C N N 392 UUW C17 C N N 393 UUW O3 O N N 394 UUW N4 N N N 395 UUW C18 C N N 396 UUW C19 C Y N 397 UUW C20 C Y N 398 UUW C21 C Y N 399 UUW C22 C Y N 400 UUW C23 C Y N 401 UUW C24 C Y N 402 UUW C25 C N N 403 UUW C26 C Y N 404 UUW C27 C Y N 405 UUW C28 C Y N 406 UUW C29 C Y N 407 UUW C30 C Y N 408 UUW C31 C Y N 409 UUW H1 H N N 410 UUW H2 H N N 411 UUW H3 H N N 412 UUW H4 H N N 413 UUW H5 H N N 414 UUW H11 H N N 415 UUW H12 H N N 416 UUW H13 H N N 417 UUW H14 H N N 418 UUW H15 H N N 419 UUW H16 H N N 420 UUW H17 H N N 421 UUW H18 H N N 422 UUW H19 H N N 423 UUW H20 H N N 424 UUW H21 H N N 425 UUW H22 H N N 426 UUW H23 H N N 427 UUW H24 H N N 428 UUW H25 H N N 429 UUW H26 H N N 430 UUW H27 H N N 431 UUW H28 H N N 432 UUW H29 H N N 433 UUW H30 H N N 434 UUW H31 H N N 435 UUW H32 H N N 436 UUW H33 H N N 437 UUW H34 H N N 438 UUW H35 H N N 439 UUW H36 H N N 440 UUW H37 H N N 441 UUW C9 C N N 442 UUW C10 C N N 443 UUW N2 N N N 444 UUW C11 C N N 445 UUW C12 C N N 446 UUW H6 H N N 447 UUW H7 H N N 448 UUW H8 H N N 449 UUW H9 H N N 450 UUW H10 H N N 451 UUW H38 H N N 452 UUW H39 H N N 453 UUW H40 H N N 454 UUW H41 H N N 455 UUW H42 H N N 456 UUW H43 H N N 457 UUW H44 H N N 458 UUW H45 H N N 459 UUW H46 H N N 460 VAL N N N N 461 VAL CA C N S 462 VAL C C N N 463 VAL O O N N 464 VAL CB C N N 465 VAL CG1 C N N 466 VAL CG2 C N N 467 VAL OXT O N N 468 VAL H H N N 469 VAL H2 H N N 470 VAL HA H N N 471 VAL HB H N N 472 VAL HG11 H N N 473 VAL HG12 H N N 474 VAL HG13 H N N 475 VAL HG21 H N N 476 VAL HG22 H N N 477 VAL HG23 H N N 478 VAL HXT H N N 479 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 SO4 S O1 doub N N 290 SO4 S O2 doub N N 291 SO4 S O3 sing N N 292 SO4 S O4 sing N N 293 THR N CA sing N N 294 THR N H sing N N 295 THR N H2 sing N N 296 THR CA C sing N N 297 THR CA CB sing N N 298 THR CA HA sing N N 299 THR C O doub N N 300 THR C OXT sing N N 301 THR CB OG1 sing N N 302 THR CB CG2 sing N N 303 THR CB HB sing N N 304 THR OG1 HG1 sing N N 305 THR CG2 HG21 sing N N 306 THR CG2 HG22 sing N N 307 THR CG2 HG23 sing N N 308 THR OXT HXT sing N N 309 TRP N CA sing N N 310 TRP N H sing N N 311 TRP N H2 sing N N 312 TRP CA C sing N N 313 TRP CA CB sing N N 314 TRP CA HA sing N N 315 TRP C O doub N N 316 TRP C OXT sing N N 317 TRP CB CG sing N N 318 TRP CB HB2 sing N N 319 TRP CB HB3 sing N N 320 TRP CG CD1 doub Y N 321 TRP CG CD2 sing Y N 322 TRP CD1 NE1 sing Y N 323 TRP CD1 HD1 sing N N 324 TRP CD2 CE2 doub Y N 325 TRP CD2 CE3 sing Y N 326 TRP NE1 CE2 sing Y N 327 TRP NE1 HE1 sing N N 328 TRP CE2 CZ2 sing Y N 329 TRP CE3 CZ3 doub Y N 330 TRP CE3 HE3 sing N N 331 TRP CZ2 CH2 doub Y N 332 TRP CZ2 HZ2 sing N N 333 TRP CZ3 CH2 sing Y N 334 TRP CZ3 HZ3 sing N N 335 TRP CH2 HH2 sing N N 336 TRP OXT HXT sing N N 337 TYR N CA sing N N 338 TYR N H sing N N 339 TYR N H2 sing N N 340 TYR CA C sing N N 341 TYR CA CB sing N N 342 TYR CA HA sing N N 343 TYR C O doub N N 344 TYR C OXT sing N N 345 TYR CB CG sing N N 346 TYR CB HB2 sing N N 347 TYR CB HB3 sing N N 348 TYR CG CD1 doub Y N 349 TYR CG CD2 sing Y N 350 TYR CD1 CE1 sing Y N 351 TYR CD1 HD1 sing N N 352 TYR CD2 CE2 doub Y N 353 TYR CD2 HD2 sing N N 354 TYR CE1 CZ doub Y N 355 TYR CE1 HE1 sing N N 356 TYR CE2 CZ sing Y N 357 TYR CE2 HE2 sing N N 358 TYR CZ OH sing N N 359 TYR OH HH sing N N 360 TYR OXT HXT sing N N 361 UUW C29 C28 doub Y N 362 UUW C29 C30 sing Y N 363 UUW C28 C27 sing Y N 364 UUW C30 C31 doub Y N 365 UUW C27 C26 doub Y N 366 UUW C31 C26 sing Y N 367 UUW C26 C25 sing N N 368 UUW C25 N4 sing N N 369 UUW C18 N4 sing N N 370 UUW C18 C19 sing N N 371 UUW N4 C17 sing N N 372 UUW C8 C7 sing N N 373 UUW C19 C24 doub Y N 374 UUW C19 C20 sing Y N 375 UUW C1 C2 sing N N 376 UUW C24 C23 sing Y N 377 UUW C20 C21 doub Y N 378 UUW C17 C16 sing N N 379 UUW C17 O3 doub N N 380 UUW C7 C6 sing N N 381 UUW C16 C15 sing N N 382 UUW C23 C22 doub Y N 383 UUW C21 C22 sing Y N 384 UUW N3 C14 sing N N 385 UUW N3 C13 sing N N 386 UUW C2 C4 sing N N 387 UUW C2 C3 sing N N 388 UUW C6 N1 sing N N 389 UUW C6 O1 doub N N 390 UUW C5 C4 sing N N 391 UUW C5 N1 sing N N 392 UUW C5 C13 sing N N 393 UUW C15 C14 sing N N 394 UUW C13 O2 doub N N 395 UUW C4 H1 sing N N 396 UUW C4 H2 sing N N 397 UUW C14 H3 sing N N 398 UUW C14 H4 sing N N 399 UUW C5 H5 sing N N 400 UUW N1 H11 sing N N 401 UUW C3 H12 sing N N 402 UUW C3 H13 sing N N 403 UUW C3 H14 sing N N 404 UUW N3 H15 sing N N 405 UUW C1 H16 sing N N 406 UUW C1 H17 sing N N 407 UUW C1 H18 sing N N 408 UUW C2 H19 sing N N 409 UUW C15 H20 sing N N 410 UUW C15 H21 sing N N 411 UUW C16 H22 sing N N 412 UUW C16 H23 sing N N 413 UUW C18 H24 sing N N 414 UUW C18 H25 sing N N 415 UUW C20 H26 sing N N 416 UUW C21 H27 sing N N 417 UUW C22 H28 sing N N 418 UUW C23 H29 sing N N 419 UUW C24 H30 sing N N 420 UUW C25 H31 sing N N 421 UUW C25 H32 sing N N 422 UUW C27 H33 sing N N 423 UUW C28 H34 sing N N 424 UUW C29 H35 sing N N 425 UUW C30 H36 sing N N 426 UUW C31 H37 sing N N 427 UUW C8 C9 sing N N 428 UUW C9 C10 sing N N 429 UUW C10 N2 sing N N 430 UUW N2 C11 sing N N 431 UUW N2 C12 sing N N 432 UUW C7 H6 sing N N 433 UUW C7 H7 sing N N 434 UUW C8 H8 sing N N 435 UUW C8 H9 sing N N 436 UUW C9 H10 sing N N 437 UUW C9 H38 sing N N 438 UUW C10 H39 sing N N 439 UUW C10 H40 sing N N 440 UUW C11 H41 sing N N 441 UUW C11 H42 sing N N 442 UUW C11 H43 sing N N 443 UUW C12 H44 sing N N 444 UUW C12 H45 sing N N 445 UUW C12 H46 sing N N 446 VAL N CA sing N N 447 VAL N H sing N N 448 VAL N H2 sing N N 449 VAL CA C sing N N 450 VAL CA CB sing N N 451 VAL CA HA sing N N 452 VAL C O doub N N 453 VAL C OXT sing N N 454 VAL CB CG1 sing N N 455 VAL CB CG2 sing N N 456 VAL CB HB sing N N 457 VAL CG1 HG11 sing N N 458 VAL CG1 HG12 sing N N 459 VAL CG1 HG13 sing N N 460 VAL CG2 HG21 sing N N 461 VAL CG2 HG22 sing N N 462 VAL CG2 HG23 sing N N 463 VAL OXT HXT sing N N 464 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id UUW _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id UUW _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5TDI _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 7NXM _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.031206 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013951 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012368 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_