HEADER METAL BINDING PROTEIN 19-MAR-21 7NXX TITLE STRUCTURE OF SUPEROXIDE DISMUTASE 1 (SOD1) IN COMPLEX WITH NANOBODY 2 TITLE 2 (NB2). COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPEROXIDE DISMUTASE [CU-ZN]; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SUPEROXIDE DISMUTASE 1,HSOD1; COMPND 5 EC: 1.15.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NANOBODY 2; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SOD1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: CAMELUS DROMEDARIUS; SOURCE 10 ORGANISM_TAXID: 9838; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CU/ZN SUPEROXIDE DISMUTASE METALLOENZYME BINDING CATALYSING THE KEYWDS 2 DISMUTATION OF SUPEROXIDES INTO HYDROGEN PEROXIDE, METAL BINDING KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.GALLARDO,F.ROUSSEAU,J.SCHYMKOWITZ,C.ULENS REVDAT 2 31-JAN-24 7NXX 1 REMARK REVDAT 1 28-SEP-22 7NXX 0 JRNL AUTH R.VAN DER KANT,R.GALLARDO,E.MICHIELS,H.WILKINSON,F.CLAES, JRNL AUTH 2 A.LAIRD,L.VAN DEN BOSCH,W.ROBBERECHT,G.H.GHASSABEH, JRNL AUTH 3 M.OLIVEBERG,C.ULENS,J.SCHYMKOWITZ,F.ROUSSEAU JRNL TITL IDENTIFICATION AND RATIONAL IMPROVEMENT OF A NANOBODY THAT JRNL TITL 2 SUPPRESSES AGGREGATION OF MUTANT SOD1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 67.1 REMARK 3 NUMBER OF REFLECTIONS : 20091 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1008 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 57.9150 - 4.1877 1.00 4287 210 0.1440 0.1704 REMARK 3 2 4.1877 - 3.3240 1.00 4084 215 0.1871 0.2559 REMARK 3 3 3.3240 - 2.9039 0.89 3611 204 0.2650 0.2881 REMARK 3 4 2.9039 - 2.6384 0.69 2751 156 0.3024 0.3314 REMARK 3 5 2.6384 - 2.4492 0.52 2100 103 0.3020 0.3108 REMARK 3 6 2.4492 - 2.3048 0.37 1483 81 0.3208 0.3542 REMARK 3 7 2.3048 - 2.1894 0.19 767 39 0.3553 0.4727 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2189 REMARK 3 ANGLE : 0.915 2962 REMARK 3 CHIRALITY : 0.057 314 REMARK 3 PLANARITY : 0.006 396 REMARK 3 DIHEDRAL : 14.273 1281 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESSEQ 1:153) REMARK 3 ORIGIN FOR THE GROUP (A): 49.0235 72.6601 34.5554 REMARK 3 T TENSOR REMARK 3 T11: 0.3516 T22: 0.2439 REMARK 3 T33: 0.8045 T12: 0.0899 REMARK 3 T13: -0.3154 T23: 0.0429 REMARK 3 L TENSOR REMARK 3 L11: 0.4120 L22: 0.4966 REMARK 3 L33: 0.1412 L12: -0.0397 REMARK 3 L13: 0.1609 L23: 0.1095 REMARK 3 S TENSOR REMARK 3 S11: 0.1011 S12: -0.2236 S13: -0.6777 REMARK 3 S21: 0.3247 S22: 0.1841 S23: -0.4072 REMARK 3 S31: 0.3091 S32: 0.1577 S33: 0.3466 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESSEQ 1:136) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2147 47.7062 26.4460 REMARK 3 T TENSOR REMARK 3 T11: 0.3630 T22: 0.2638 REMARK 3 T33: 0.1387 T12: -0.0040 REMARK 3 T13: -0.1259 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 0.3833 L22: 0.8440 REMARK 3 L33: 0.3196 L12: -0.5514 REMARK 3 L13: 0.0841 L23: -0.2414 REMARK 3 S TENSOR REMARK 3 S11: -0.0109 S12: -0.0463 S13: 0.1739 REMARK 3 S21: 0.1535 S22: -0.1249 S23: -0.3322 REMARK 3 S31: -0.0679 S32: 0.0743 S33: 0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7NXX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1292114770. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97923 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI JUNGFRAU 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AIMLESS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29792 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.189 REMARK 200 RESOLUTION RANGE LOW (A) : 58.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2V0A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES,1.5 M LITHIUM SULPHATE, PH REMARK 280 7.5, VAPOR DIFFUSION, TEMPERATURE 273K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.89500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 57.91500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 57.91500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.84250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 57.91500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 57.91500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.94750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 57.91500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.91500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.84250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 57.91500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.91500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 20.94750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 41.89500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 115.83000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 115.83000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 41.89500 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C MET B 39 CA GLY B 40 1.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY B 40 N GLY B 40 CA -0.581 REMARK 500 GLY B 40 CA GLY B 40 C 0.859 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 79 NE - CZ - NH1 ANGL. DEV. = -3.4 DEGREES REMARK 500 GLY B 40 C - N - CA ANGL. DEV. = -54.8 DEGREES REMARK 500 GLY B 40 N - CA - C ANGL. DEV. = -26.9 DEGREES REMARK 500 GLY B 40 CA - C - O ANGL. DEV. = -20.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 55 38.29 -96.55 REMARK 500 ALA B 2 -89.59 -77.45 REMARK 500 SER B 61 -3.27 -151.32 REMARK 500 ASP B 90 61.30 37.23 REMARK 500 HIS B 135 79.46 -101.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 MET B 39 GLY B 40 139.92 REMARK 500 GLY B 40 TRP B 41 -143.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY B 40 20.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 201 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 46 ND1 REMARK 620 2 HIS A 48 NE2 135.9 REMARK 620 3 HIS A 120 NE2 105.6 117.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 71 ND1 REMARK 620 2 HIS A 80 ND1 121.0 REMARK 620 3 ASP A 83 OD1 99.2 95.7 REMARK 620 N 1 2 DBREF 7NXX A 1 153 UNP P00441 SODC_HUMAN 2 154 DBREF 7NXX B 1 136 PDB 7NXX 7NXX 1 136 SEQRES 1 A 153 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 A 153 VAL GLN GLY ILE ILE ASN PHE GLU GLN LYS GLU SER ASN SEQRES 3 A 153 GLY PRO VAL LYS VAL TRP GLY SER ILE LYS GLY LEU THR SEQRES 4 A 153 GLU GLY LEU HIS GLY PHE HIS VAL HIS GLU PHE GLY ASP SEQRES 5 A 153 ASN THR ALA GLY CYS THR SER ALA GLY PRO HIS PHE ASN SEQRES 6 A 153 PRO LEU SER ARG LYS HIS GLY GLY PRO LYS ASP GLU GLU SEQRES 7 A 153 ARG HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS SEQRES 8 A 153 ASP GLY VAL ALA ASP VAL SER ILE GLU ASP SER VAL ILE SEQRES 9 A 153 SER LEU SER GLY ASP HIS CYS ILE ILE GLY ARG THR LEU SEQRES 10 A 153 VAL VAL HIS GLU LYS ALA ASP ASP LEU GLY LYS GLY GLY SEQRES 11 A 153 ASN GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG SEQRES 12 A 153 LEU ALA CYS GLY VAL ILE GLY ILE ALA GLN SEQRES 1 B 136 MET ALA GLN VAL GLN LEU GLN GLU SER GLY GLY GLY SER SEQRES 2 B 136 VAL GLN ALA GLY GLY SER LEU ARG LEU ALA CYS VAL ALA SEQRES 3 B 136 SER GLY GLY ASP THR ARG PRO TYR ILE THR TYR TRP MET SEQRES 4 B 136 GLY TRP TYR ARG GLN ALA PRO GLY LYS GLU ARG GLU GLY SEQRES 5 B 136 VAL ALA THR ILE TYR THR GLY GLY SER GLY THR TYR TYR SEQRES 6 B 136 SER ASP SER VAL GLU GLY ARG PHE THR ILE SER GLN ASP SEQRES 7 B 136 LYS ALA GLN ARG THR VAL TYR LEU GLN MET ASN ASP LEU SEQRES 8 B 136 LYS PRO GLU ASP THR ALA MET TYR TYR CYS ALA ALA GLY SEQRES 9 B 136 ASN GLY ALA LEU PRO PRO GLY ARG ARG LEU SER PRO GLN SEQRES 10 B 136 ASN MET ASP THR TRP GLY PRO GLY THR GLN VAL THR VAL SEQRES 11 B 136 SER SER HIS HIS HIS HIS HET CU A 201 1 HET ZN A 202 1 HETNAM CU COPPER (II) ION HETNAM ZN ZINC ION FORMUL 3 CU CU 2+ FORMUL 4 ZN ZN 2+ HELIX 1 AA1 CYS A 57 GLY A 61 5 5 HELIX 2 AA2 GLU A 132 LYS A 136 5 5 HELIX 3 AA3 ASP B 67 GLU B 70 5 4 HELIX 4 AA4 LYS B 79 GLN B 81 5 3 HELIX 5 AA5 LYS B 92 THR B 96 5 5 HELIX 6 AA6 SER B 115 MET B 119 5 5 SHEET 1 AA1 5 ALA A 95 ASP A 101 0 SHEET 2 AA1 5 VAL A 29 LYS A 36 -1 N VAL A 29 O ASP A 101 SHEET 3 AA1 5 GLN A 15 GLU A 21 -1 N ASN A 19 O TRP A 32 SHEET 4 AA1 5 LYS A 3 LEU A 8 -1 N ALA A 4 O PHE A 20 SHEET 5 AA1 5 GLY A 150 ILE A 151 -1 O GLY A 150 N VAL A 5 SHEET 1 AA2 4 ASP A 83 ALA A 89 0 SHEET 2 AA2 4 GLY A 41 HIS A 48 -1 N GLY A 41 O ALA A 89 SHEET 3 AA2 4 THR A 116 HIS A 120 -1 O THR A 116 N HIS A 48 SHEET 4 AA2 4 ARG A 143 VAL A 148 -1 O GLY A 147 N LEU A 117 SHEET 1 AA3 4 GLN B 5 SER B 9 0 SHEET 2 AA3 4 LEU B 20 SER B 27 -1 O VAL B 25 N GLN B 7 SHEET 3 AA3 4 THR B 83 MET B 88 -1 O MET B 88 N LEU B 20 SHEET 4 AA3 4 PHE B 73 ASP B 78 -1 N THR B 74 O GLN B 87 SHEET 1 AA4 6 SER B 13 GLN B 15 0 SHEET 2 AA4 6 THR B 126 SER B 131 1 O SER B 131 N VAL B 14 SHEET 3 AA4 6 ALA B 97 ASN B 105 -1 N TYR B 99 O THR B 126 SHEET 4 AA4 6 TYR B 37 GLN B 44 -1 N TYR B 42 O TYR B 100 SHEET 5 AA4 6 GLU B 51 TYR B 57 -1 O VAL B 53 N TRP B 41 SHEET 6 AA4 6 THR B 63 TYR B 65 -1 O TYR B 64 N THR B 55 SHEET 1 AA5 4 SER B 13 GLN B 15 0 SHEET 2 AA5 4 THR B 126 SER B 131 1 O SER B 131 N VAL B 14 SHEET 3 AA5 4 ALA B 97 ASN B 105 -1 N TYR B 99 O THR B 126 SHEET 4 AA5 4 THR B 121 TRP B 122 -1 O THR B 121 N ALA B 103 SSBOND 1 CYS A 57 CYS A 146 1555 1555 2.06 SSBOND 2 CYS B 24 CYS B 101 1555 1555 2.03 LINK ND1 HIS A 46 CU A CU A 201 1555 1555 2.12 LINK NE2 HIS A 48 CU A CU A 201 1555 1555 2.06 LINK ND1 HIS A 71 ZN A ZN A 202 1555 1555 1.92 LINK ND1 HIS A 80 ZN A ZN A 202 1555 1555 2.08 LINK OD1 ASP A 83 ZN A ZN A 202 1555 1555 2.22 LINK NE2 HIS A 120 CU A CU A 201 1555 1555 2.15 CRYST1 115.830 115.830 83.790 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008633 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008633 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011935 0.00000