data_7NYM # _entry.id 7NYM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7NYM pdb_00007nym 10.2210/pdb7nym/pdb WWPDB D_1292114828 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-12-22 2 'Structure model' 1 1 2022-03-02 3 'Structure model' 1 2 2022-03-09 4 'Structure model' 1 3 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' atom_type 6 4 'Structure model' chem_comp_atom 7 4 'Structure model' chem_comp_bond 8 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_DOI' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 2 'Structure model' '_citation.year' 5 2 'Structure model' '_citation_author.identifier_ORCID' 6 2 'Structure model' '_citation_author.name' 7 3 'Structure model' '_citation.journal_volume' 8 3 'Structure model' '_citation.page_first' 9 3 'Structure model' '_citation.page_last' 10 3 'Structure model' '_citation_author.identifier_ORCID' 11 4 'Structure model' '_atom_type.pdbx_N_electrons' 12 4 'Structure model' '_atom_type.pdbx_scat_Z' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7NYM _pdbx_database_status.recvd_initial_deposition_date 2021-03-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category FoldIt _pdbx_database_status.pdb_format_compatible N # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'wild type JIP1 SH3 domain' _pdbx_database_related.db_id 7NYK _pdbx_database_related.content_type re-refinement # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Perez, L.M.' 1 ? 'Ielasi, F.S.' 2 ? 'Palencia, A.' 3 0000-0002-1805-319X 'Jensen, M.R.' 4 0000-0003-0419-2196 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nature _citation.journal_id_ASTM NATUAS _citation.journal_id_CSD 0006 _citation.journal_id_ISSN 1476-4687 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 602 _citation.language ? _citation.page_first 695 _citation.page_last 700 _citation.title 'Visualizing protein breathing motions associated with aromatic ring flipping.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41586-022-04417-6 _citation.pdbx_database_id_PubMed 35173330 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Marino Perez, L.' 1 ? primary 'Ielasi, F.S.' 2 ? primary 'Bessa, L.M.' 3 ? primary 'Maurin, D.' 4 ? primary 'Kragelj, J.' 5 ? primary 'Blackledge, M.' 6 ? primary 'Salvi, N.' 7 ? primary 'Bouvignies, G.' 8 ? primary 'Palencia, A.' 9 ? primary 'Jensen, M.R.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SH3 domain of JNK-interacting Protein 1 (JIP1)' 7498.314 4 3.1.3.36 V517A ? 'GHME belongs to expression vector pET28a' 2 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 3 non-polymer syn 'HEXAETHYLENE GLYCOL' 282.331 3 ? ? ? ? 4 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 5 water nat water 18.015 218 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;JIP-1,JNK-interacting protein 1,Islet-brain 1,IB-1,JNK MAP kinase scaffold protein 1,Mitogen-activated protein kinase 8-interacting protein 1,C-Jun-amino-terminal kinase-interacting protein 1 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GHMEQTHRAIFRFVPRHEDELELEVDDPLLAELQAEDYWYEAYNMRTGARGVFPAYYAIEVTK _entity_poly.pdbx_seq_one_letter_code_can GHMEQTHRAIFRFVPRHEDELELEVDDPLLAELQAEDYWYEAYNMRTGARGVFPAYYAIEVTK _entity_poly.pdbx_strand_id AAA,BBB,CCC,DDD _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'HEXAETHYLENE GLYCOL' P6G 4 'PHOSPHATE ION' PO4 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MET n 1 4 GLU n 1 5 GLN n 1 6 THR n 1 7 HIS n 1 8 ARG n 1 9 ALA n 1 10 ILE n 1 11 PHE n 1 12 ARG n 1 13 PHE n 1 14 VAL n 1 15 PRO n 1 16 ARG n 1 17 HIS n 1 18 GLU n 1 19 ASP n 1 20 GLU n 1 21 LEU n 1 22 GLU n 1 23 LEU n 1 24 GLU n 1 25 VAL n 1 26 ASP n 1 27 ASP n 1 28 PRO n 1 29 LEU n 1 30 LEU n 1 31 ALA n 1 32 GLU n 1 33 LEU n 1 34 GLN n 1 35 ALA n 1 36 GLU n 1 37 ASP n 1 38 TYR n 1 39 TRP n 1 40 TYR n 1 41 GLU n 1 42 ALA n 1 43 TYR n 1 44 ASN n 1 45 MET n 1 46 ARG n 1 47 THR n 1 48 GLY n 1 49 ALA n 1 50 ARG n 1 51 GLY n 1 52 VAL n 1 53 PHE n 1 54 PRO n 1 55 ALA n 1 56 TYR n 1 57 TYR n 1 58 ALA n 1 59 ILE n 1 60 GLU n 1 61 VAL n 1 62 THR n 1 63 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 63 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MAPK8IP1, IB1, JIP1, PRKM8IP' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 P6G non-polymer . 'HEXAETHYLENE GLYCOL' 'POLYETHYLENE GLYCOL PEG400' 'C12 H26 O7' 282.331 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 487 ? ? ? AAA . n A 1 2 HIS 2 488 ? ? ? AAA . n A 1 3 MET 3 489 ? ? ? AAA . n A 1 4 GLU 4 490 ? ? ? AAA . n A 1 5 GLN 5 491 491 GLN GLN AAA . n A 1 6 THR 6 492 492 THR THR AAA . n A 1 7 HIS 7 493 493 HIS HIS AAA . n A 1 8 ARG 8 494 494 ARG ARG AAA . n A 1 9 ALA 9 495 495 ALA ALA AAA . n A 1 10 ILE 10 496 496 ILE ILE AAA . n A 1 11 PHE 11 497 497 PHE PHE AAA . n A 1 12 ARG 12 498 498 ARG ARG AAA . n A 1 13 PHE 13 499 499 PHE PHE AAA . n A 1 14 VAL 14 500 500 VAL VAL AAA . n A 1 15 PRO 15 501 501 PRO PRO AAA . n A 1 16 ARG 16 502 502 ARG ARG AAA . n A 1 17 HIS 17 503 503 HIS HIS AAA . n A 1 18 GLU 18 504 504 GLU GLU AAA . n A 1 19 ASP 19 505 505 ASP ASP AAA . n A 1 20 GLU 20 506 506 GLU GLU AAA . n A 1 21 LEU 21 507 507 LEU LEU AAA . n A 1 22 GLU 22 508 508 GLU GLU AAA . n A 1 23 LEU 23 509 509 LEU LEU AAA . n A 1 24 GLU 24 510 510 GLU GLU AAA . n A 1 25 VAL 25 511 511 VAL VAL AAA . n A 1 26 ASP 26 512 512 ASP ASP AAA . n A 1 27 ASP 27 513 513 ASP ASP AAA . n A 1 28 PRO 28 514 514 PRO PRO AAA . n A 1 29 LEU 29 515 515 LEU LEU AAA . n A 1 30 LEU 30 516 516 LEU LEU AAA . n A 1 31 ALA 31 517 517 ALA ALA AAA . n A 1 32 GLU 32 518 518 GLU GLU AAA . n A 1 33 LEU 33 519 519 LEU LEU AAA . n A 1 34 GLN 34 520 520 GLN GLN AAA . n A 1 35 ALA 35 521 521 ALA ALA AAA . n A 1 36 GLU 36 522 522 GLU GLU AAA . n A 1 37 ASP 37 523 523 ASP ASP AAA . n A 1 38 TYR 38 524 524 TYR TYR AAA . n A 1 39 TRP 39 525 525 TRP TRP AAA . n A 1 40 TYR 40 526 526 TYR TYR AAA . n A 1 41 GLU 41 527 527 GLU GLU AAA . n A 1 42 ALA 42 528 528 ALA ALA AAA . n A 1 43 TYR 43 529 529 TYR TYR AAA . n A 1 44 ASN 44 530 530 ASN ASN AAA . n A 1 45 MET 45 531 531 MET MET AAA . n A 1 46 ARG 46 532 532 ARG ARG AAA . n A 1 47 THR 47 533 533 THR THR AAA . n A 1 48 GLY 48 534 534 GLY GLY AAA . n A 1 49 ALA 49 535 535 ALA ALA AAA . n A 1 50 ARG 50 536 536 ARG ARG AAA . n A 1 51 GLY 51 537 537 GLY GLY AAA . n A 1 52 VAL 52 538 538 VAL VAL AAA . n A 1 53 PHE 53 539 539 PHE PHE AAA . n A 1 54 PRO 54 540 540 PRO PRO AAA . n A 1 55 ALA 55 541 541 ALA ALA AAA . n A 1 56 TYR 56 542 542 TYR TYR AAA . n A 1 57 TYR 57 543 543 TYR TYR AAA . n A 1 58 ALA 58 544 544 ALA ALA AAA . n A 1 59 ILE 59 545 545 ILE ILE AAA . n A 1 60 GLU 60 546 546 GLU GLU AAA . n A 1 61 VAL 61 547 547 VAL VAL AAA . n A 1 62 THR 62 548 548 THR THR AAA . n A 1 63 LYS 63 549 ? ? ? AAA . n B 1 1 GLY 1 -2 -2 GLY GLY BBB . n B 1 2 HIS 2 -1 -1 HIS HIS BBB . n B 1 3 MET 3 0 0 MET MET BBB . n B 1 4 GLU 4 1 490 GLU GLU BBB . n B 1 5 GLN 5 2 491 GLN GLN BBB . n B 1 6 THR 6 3 492 THR THR BBB . n B 1 7 HIS 7 4 493 HIS HIS BBB . n B 1 8 ARG 8 5 494 ARG ARG BBB . n B 1 9 ALA 9 6 495 ALA ALA BBB . n B 1 10 ILE 10 7 496 ILE ILE BBB . n B 1 11 PHE 11 8 497 PHE PHE BBB . n B 1 12 ARG 12 9 498 ARG ARG BBB . n B 1 13 PHE 13 10 499 PHE PHE BBB . n B 1 14 VAL 14 11 500 VAL VAL BBB . n B 1 15 PRO 15 12 501 PRO PRO BBB . n B 1 16 ARG 16 13 502 ARG ARG BBB . n B 1 17 HIS 17 14 503 HIS HIS BBB . n B 1 18 GLU 18 15 504 GLU GLU BBB . n B 1 19 ASP 19 16 505 ASP ASP BBB . n B 1 20 GLU 20 17 506 GLU GLU BBB . n B 1 21 LEU 21 18 507 LEU LEU BBB . n B 1 22 GLU 22 19 508 GLU GLU BBB . n B 1 23 LEU 23 20 509 LEU LEU BBB . n B 1 24 GLU 24 21 510 GLU GLU BBB . n B 1 25 VAL 25 22 511 VAL VAL BBB . n B 1 26 ASP 26 23 512 ASP ASP BBB . n B 1 27 ASP 27 24 513 ASP ASP BBB . n B 1 28 PRO 28 25 514 PRO PRO BBB . n B 1 29 LEU 29 26 515 LEU LEU BBB . n B 1 30 LEU 30 27 516 LEU LEU BBB . n B 1 31 ALA 31 28 517 ALA ALA BBB . n B 1 32 GLU 32 29 518 GLU GLU BBB . n B 1 33 LEU 33 30 519 LEU LEU BBB . n B 1 34 GLN 34 31 520 GLN GLN BBB . n B 1 35 ALA 35 32 521 ALA ALA BBB . n B 1 36 GLU 36 33 522 GLU GLU BBB . n B 1 37 ASP 37 34 523 ASP ASP BBB . n B 1 38 TYR 38 35 524 TYR TYR BBB . n B 1 39 TRP 39 36 525 TRP TRP BBB . n B 1 40 TYR 40 37 526 TYR TYR BBB . n B 1 41 GLU 41 38 527 GLU GLU BBB . n B 1 42 ALA 42 39 528 ALA ALA BBB . n B 1 43 TYR 43 40 529 TYR TYR BBB . n B 1 44 ASN 44 41 530 ASN ASN BBB . n B 1 45 MET 45 42 531 MET MET BBB . n B 1 46 ARG 46 43 532 ARG ARG BBB . n B 1 47 THR 47 44 533 THR THR BBB . n B 1 48 GLY 48 45 534 GLY GLY BBB . n B 1 49 ALA 49 46 535 ALA ALA BBB . n B 1 50 ARG 50 47 536 ARG ARG BBB . n B 1 51 GLY 51 48 537 GLY GLY BBB . n B 1 52 VAL 52 49 538 VAL VAL BBB . n B 1 53 PHE 53 50 539 PHE PHE BBB . n B 1 54 PRO 54 51 540 PRO PRO BBB . n B 1 55 ALA 55 52 541 ALA ALA BBB . n B 1 56 TYR 56 53 542 TYR TYR BBB . n B 1 57 TYR 57 54 543 TYR TYR BBB . n B 1 58 ALA 58 55 544 ALA ALA BBB . n B 1 59 ILE 59 56 545 ILE ILE BBB . n B 1 60 GLU 60 57 546 GLU GLU BBB . n B 1 61 VAL 61 58 547 VAL VAL BBB . n B 1 62 THR 62 61 548 THR THR BBB . n B 1 63 LYS 63 62 ? ? ? BBB . n C 1 1 GLY 1 487 ? ? ? CCC . n C 1 2 HIS 2 488 ? ? ? CCC . n C 1 3 MET 3 489 ? ? ? CCC . n C 1 4 GLU 4 490 490 GLU GLU CCC . n C 1 5 GLN 5 491 491 GLN GLN CCC . n C 1 6 THR 6 492 492 THR THR CCC . n C 1 7 HIS 7 493 493 HIS HIS CCC . n C 1 8 ARG 8 494 494 ARG ARG CCC . n C 1 9 ALA 9 495 495 ALA ALA CCC . n C 1 10 ILE 10 496 496 ILE ILE CCC . n C 1 11 PHE 11 497 497 PHE PHE CCC . n C 1 12 ARG 12 498 498 ARG ARG CCC . n C 1 13 PHE 13 499 499 PHE PHE CCC . n C 1 14 VAL 14 500 500 VAL VAL CCC . n C 1 15 PRO 15 501 501 PRO PRO CCC . n C 1 16 ARG 16 502 502 ARG ARG CCC . n C 1 17 HIS 17 503 503 HIS HIS CCC . n C 1 18 GLU 18 504 504 GLU GLU CCC . n C 1 19 ASP 19 505 505 ASP ASP CCC . n C 1 20 GLU 20 506 506 GLU GLU CCC . n C 1 21 LEU 21 507 507 LEU LEU CCC . n C 1 22 GLU 22 508 508 GLU GLU CCC . n C 1 23 LEU 23 509 509 LEU LEU CCC . n C 1 24 GLU 24 510 510 GLU GLU CCC . n C 1 25 VAL 25 511 511 VAL VAL CCC . n C 1 26 ASP 26 512 512 ASP ASP CCC . n C 1 27 ASP 27 513 513 ASP ASP CCC . n C 1 28 PRO 28 514 514 PRO PRO CCC . n C 1 29 LEU 29 515 515 LEU LEU CCC . n C 1 30 LEU 30 516 516 LEU LEU CCC . n C 1 31 ALA 31 517 517 ALA ALA CCC . n C 1 32 GLU 32 518 518 GLU GLU CCC . n C 1 33 LEU 33 519 519 LEU LEU CCC . n C 1 34 GLN 34 520 520 GLN GLN CCC . n C 1 35 ALA 35 521 521 ALA ALA CCC . n C 1 36 GLU 36 522 522 GLU GLU CCC . n C 1 37 ASP 37 523 523 ASP ASP CCC . n C 1 38 TYR 38 524 524 TYR TYR CCC . n C 1 39 TRP 39 525 525 TRP TRP CCC . n C 1 40 TYR 40 526 526 TYR TYR CCC . n C 1 41 GLU 41 527 527 GLU GLU CCC . n C 1 42 ALA 42 528 528 ALA ALA CCC . n C 1 43 TYR 43 529 529 TYR TYR CCC . n C 1 44 ASN 44 530 530 ASN ASN CCC . n C 1 45 MET 45 531 531 MET MET CCC . n C 1 46 ARG 46 532 532 ARG ARG CCC . n C 1 47 THR 47 533 533 THR THR CCC . n C 1 48 GLY 48 534 534 GLY GLY CCC . n C 1 49 ALA 49 535 535 ALA ALA CCC . n C 1 50 ARG 50 536 536 ARG ARG CCC . n C 1 51 GLY 51 537 537 GLY GLY CCC . n C 1 52 VAL 52 538 538 VAL VAL CCC . n C 1 53 PHE 53 539 539 PHE PHE CCC . n C 1 54 PRO 54 540 540 PRO PRO CCC . n C 1 55 ALA 55 541 541 ALA ALA CCC . n C 1 56 TYR 56 542 542 TYR TYR CCC . n C 1 57 TYR 57 543 543 TYR TYR CCC . n C 1 58 ALA 58 544 544 ALA ALA CCC . n C 1 59 ILE 59 545 545 ILE ILE CCC . n C 1 60 GLU 60 546 546 GLU GLU CCC . n C 1 61 VAL 61 547 547 VAL VAL CCC . n C 1 62 THR 62 550 548 THR THR CCC . n C 1 63 LYS 63 551 ? ? ? CCC . n D 1 1 GLY 1 -2 -2 GLY GLY DDD . n D 1 2 HIS 2 -1 -1 HIS HIS DDD . n D 1 3 MET 3 0 0 MET MET DDD . n D 1 4 GLU 4 490 490 GLU GLU DDD . n D 1 5 GLN 5 491 491 GLN GLN DDD . n D 1 6 THR 6 492 492 THR THR DDD . n D 1 7 HIS 7 493 493 HIS HIS DDD . n D 1 8 ARG 8 494 494 ARG ARG DDD . n D 1 9 ALA 9 495 495 ALA ALA DDD . n D 1 10 ILE 10 496 496 ILE ILE DDD . n D 1 11 PHE 11 497 497 PHE PHE DDD . n D 1 12 ARG 12 498 498 ARG ARG DDD . n D 1 13 PHE 13 499 499 PHE PHE DDD . n D 1 14 VAL 14 500 500 VAL VAL DDD . n D 1 15 PRO 15 501 501 PRO PRO DDD . n D 1 16 ARG 16 502 502 ARG ARG DDD . n D 1 17 HIS 17 503 503 HIS HIS DDD . n D 1 18 GLU 18 504 504 GLU GLU DDD . n D 1 19 ASP 19 505 505 ASP ASP DDD . n D 1 20 GLU 20 506 506 GLU GLU DDD . n D 1 21 LEU 21 507 507 LEU LEU DDD . n D 1 22 GLU 22 508 508 GLU GLU DDD . n D 1 23 LEU 23 509 509 LEU LEU DDD . n D 1 24 GLU 24 510 510 GLU GLU DDD . n D 1 25 VAL 25 511 511 VAL VAL DDD . n D 1 26 ASP 26 512 512 ASP ASP DDD . n D 1 27 ASP 27 513 513 ASP ASP DDD . n D 1 28 PRO 28 514 514 PRO PRO DDD . n D 1 29 LEU 29 515 515 LEU LEU DDD . n D 1 30 LEU 30 516 516 LEU LEU DDD . n D 1 31 ALA 31 517 517 ALA ALA DDD . n D 1 32 GLU 32 518 518 GLU GLU DDD . n D 1 33 LEU 33 519 519 LEU LEU DDD . n D 1 34 GLN 34 520 520 GLN GLN DDD . n D 1 35 ALA 35 521 521 ALA ALA DDD . n D 1 36 GLU 36 522 522 GLU GLU DDD . n D 1 37 ASP 37 523 523 ASP ASP DDD . n D 1 38 TYR 38 524 524 TYR TYR DDD . n D 1 39 TRP 39 525 525 TRP TRP DDD . n D 1 40 TYR 40 526 526 TYR TYR DDD . n D 1 41 GLU 41 527 527 GLU GLU DDD . n D 1 42 ALA 42 528 528 ALA ALA DDD . n D 1 43 TYR 43 529 529 TYR TYR DDD . n D 1 44 ASN 44 530 530 ASN ASN DDD . n D 1 45 MET 45 531 531 MET MET DDD . n D 1 46 ARG 46 532 532 ARG ARG DDD . n D 1 47 THR 47 533 533 THR THR DDD . n D 1 48 GLY 48 534 534 GLY GLY DDD . n D 1 49 ALA 49 535 535 ALA ALA DDD . n D 1 50 ARG 50 536 536 ARG ARG DDD . n D 1 51 GLY 51 537 537 GLY GLY DDD . n D 1 52 VAL 52 538 538 VAL VAL DDD . n D 1 53 PHE 53 539 539 PHE PHE DDD . n D 1 54 PRO 54 540 540 PRO PRO DDD . n D 1 55 ALA 55 541 541 ALA ALA DDD . n D 1 56 TYR 56 542 542 TYR TYR DDD . n D 1 57 TYR 57 543 543 TYR TYR DDD . n D 1 58 ALA 58 544 544 ALA ALA DDD . n D 1 59 ILE 59 545 545 ILE ILE DDD . n D 1 60 GLU 60 546 546 GLU GLU DDD . n D 1 61 VAL 61 547 547 VAL VAL DDD . n D 1 62 THR 62 548 548 THR THR DDD . n D 1 63 LYS 63 549 ? ? ? DDD . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 1 601 6 SO4 SO4 AAA . F 2 SO4 1 101 1 SO4 SO4 BBB . G 3 P6G 1 102 9 P6G P6G BBB . H 3 P6G 1 103 10 P6G P6G BBB . I 4 PO4 1 104 1 PO4 PO4 BBB . J 3 P6G 1 601 8 P6G P6G CCC . K 2 SO4 1 601 4 SO4 SO4 DDD . L 5 HOH 1 701 14 HOH HOH AAA . L 5 HOH 2 702 132 HOH HOH AAA . L 5 HOH 3 703 268 HOH HOH AAA . L 5 HOH 4 704 261 HOH HOH AAA . L 5 HOH 5 705 219 HOH HOH AAA . L 5 HOH 6 706 109 HOH HOH AAA . L 5 HOH 7 707 40 HOH HOH AAA . L 5 HOH 8 708 266 HOH HOH AAA . L 5 HOH 9 709 218 HOH HOH AAA . L 5 HOH 10 710 270 HOH HOH AAA . L 5 HOH 11 711 24 HOH HOH AAA . L 5 HOH 12 712 69 HOH HOH AAA . L 5 HOH 13 713 32 HOH HOH AAA . L 5 HOH 14 714 167 HOH HOH AAA . L 5 HOH 15 715 97 HOH HOH AAA . L 5 HOH 16 716 33 HOH HOH AAA . L 5 HOH 17 717 92 HOH HOH AAA . L 5 HOH 18 718 116 HOH HOH AAA . L 5 HOH 19 719 107 HOH HOH AAA . L 5 HOH 20 720 28 HOH HOH AAA . L 5 HOH 21 721 55 HOH HOH AAA . L 5 HOH 22 722 23 HOH HOH AAA . L 5 HOH 23 723 120 HOH HOH AAA . L 5 HOH 24 724 16 HOH HOH AAA . L 5 HOH 25 725 45 HOH HOH AAA . L 5 HOH 26 726 13 HOH HOH AAA . L 5 HOH 27 727 275 HOH HOH AAA . L 5 HOH 28 728 64 HOH HOH AAA . L 5 HOH 29 729 62 HOH HOH AAA . L 5 HOH 30 730 25 HOH HOH AAA . L 5 HOH 31 731 125 HOH HOH AAA . L 5 HOH 32 732 30 HOH HOH AAA . L 5 HOH 33 733 36 HOH HOH AAA . L 5 HOH 34 734 100 HOH HOH AAA . L 5 HOH 35 735 52 HOH HOH AAA . L 5 HOH 36 736 37 HOH HOH AAA . L 5 HOH 37 737 216 HOH HOH AAA . L 5 HOH 38 738 202 HOH HOH AAA . L 5 HOH 39 739 203 HOH HOH AAA . L 5 HOH 40 740 147 HOH HOH AAA . L 5 HOH 41 741 179 HOH HOH AAA . L 5 HOH 42 742 189 HOH HOH AAA . L 5 HOH 43 743 154 HOH HOH AAA . L 5 HOH 44 744 159 HOH HOH AAA . L 5 HOH 45 745 182 HOH HOH AAA . L 5 HOH 46 746 269 HOH HOH AAA . L 5 HOH 47 747 104 HOH HOH AAA . M 5 HOH 1 201 169 HOH HOH BBB . M 5 HOH 2 202 124 HOH HOH BBB . M 5 HOH 3 203 254 HOH HOH BBB . M 5 HOH 4 204 53 HOH HOH BBB . M 5 HOH 5 205 57 HOH HOH BBB . M 5 HOH 6 206 12 HOH HOH BBB . M 5 HOH 7 207 142 HOH HOH BBB . M 5 HOH 8 208 274 HOH HOH BBB . M 5 HOH 9 209 2 HOH HOH BBB . M 5 HOH 10 210 158 HOH HOH BBB . M 5 HOH 11 211 26 HOH HOH BBB . M 5 HOH 12 212 76 HOH HOH BBB . M 5 HOH 13 213 50 HOH HOH BBB . M 5 HOH 14 214 146 HOH HOH BBB . M 5 HOH 15 215 98 HOH HOH BBB . M 5 HOH 16 216 21 HOH HOH BBB . M 5 HOH 17 217 234 HOH HOH BBB . M 5 HOH 18 218 1 HOH HOH BBB . M 5 HOH 19 219 102 HOH HOH BBB . M 5 HOH 20 220 88 HOH HOH BBB . M 5 HOH 21 221 11 HOH HOH BBB . M 5 HOH 22 222 8 HOH HOH BBB . M 5 HOH 23 223 118 HOH HOH BBB . M 5 HOH 24 224 106 HOH HOH BBB . M 5 HOH 25 225 137 HOH HOH BBB . M 5 HOH 26 226 130 HOH HOH BBB . M 5 HOH 27 227 141 HOH HOH BBB . M 5 HOH 28 228 134 HOH HOH BBB . M 5 HOH 29 229 66 HOH HOH BBB . M 5 HOH 30 230 135 HOH HOH BBB . M 5 HOH 31 231 172 HOH HOH BBB . M 5 HOH 32 232 272 HOH HOH BBB . M 5 HOH 33 233 255 HOH HOH BBB . M 5 HOH 34 234 18 HOH HOH BBB . M 5 HOH 35 235 110 HOH HOH BBB . M 5 HOH 36 236 108 HOH HOH BBB . M 5 HOH 37 237 264 HOH HOH BBB . M 5 HOH 38 238 84 HOH HOH BBB . M 5 HOH 39 239 58 HOH HOH BBB . M 5 HOH 40 240 22 HOH HOH BBB . M 5 HOH 41 241 211 HOH HOH BBB . M 5 HOH 42 242 138 HOH HOH BBB . M 5 HOH 43 243 190 HOH HOH BBB . M 5 HOH 44 244 221 HOH HOH BBB . M 5 HOH 45 245 103 HOH HOH BBB . M 5 HOH 46 246 279 HOH HOH BBB . M 5 HOH 47 247 273 HOH HOH BBB . M 5 HOH 48 248 72 HOH HOH BBB . M 5 HOH 49 249 212 HOH HOH BBB . M 5 HOH 50 250 263 HOH HOH BBB . M 5 HOH 51 251 280 HOH HOH BBB . M 5 HOH 52 252 127 HOH HOH BBB . M 5 HOH 53 253 160 HOH HOH BBB . M 5 HOH 54 254 149 HOH HOH BBB . M 5 HOH 55 255 223 HOH HOH BBB . M 5 HOH 56 256 256 HOH HOH BBB . M 5 HOH 57 257 224 HOH HOH BBB . M 5 HOH 58 258 180 HOH HOH BBB . M 5 HOH 59 259 230 HOH HOH BBB . M 5 HOH 60 260 265 HOH HOH BBB . M 5 HOH 61 261 174 HOH HOH BBB . M 5 HOH 62 262 194 HOH HOH BBB . M 5 HOH 63 263 181 HOH HOH BBB . N 5 HOH 1 701 197 HOH HOH CCC . N 5 HOH 2 702 186 HOH HOH CCC . N 5 HOH 3 703 119 HOH HOH CCC . N 5 HOH 4 704 54 HOH HOH CCC . N 5 HOH 5 705 60 HOH HOH CCC . N 5 HOH 6 706 10 HOH HOH CCC . N 5 HOH 7 707 35 HOH HOH CCC . N 5 HOH 8 708 44 HOH HOH CCC . N 5 HOH 9 709 56 HOH HOH CCC . N 5 HOH 10 710 75 HOH HOH CCC . N 5 HOH 11 711 39 HOH HOH CCC . N 5 HOH 12 712 34 HOH HOH CCC . N 5 HOH 13 713 38 HOH HOH CCC . N 5 HOH 14 714 80 HOH HOH CCC . N 5 HOH 15 715 19 HOH HOH CCC . N 5 HOH 16 716 191 HOH HOH CCC . N 5 HOH 17 717 198 HOH HOH CCC . N 5 HOH 18 718 70 HOH HOH CCC . N 5 HOH 19 719 27 HOH HOH CCC . N 5 HOH 20 720 85 HOH HOH CCC . N 5 HOH 21 721 51 HOH HOH CCC . N 5 HOH 22 722 277 HOH HOH CCC . N 5 HOH 23 723 90 HOH HOH CCC . N 5 HOH 24 724 129 HOH HOH CCC . N 5 HOH 25 725 165 HOH HOH CCC . N 5 HOH 26 726 63 HOH HOH CCC . N 5 HOH 27 727 79 HOH HOH CCC . N 5 HOH 28 728 113 HOH HOH CCC . N 5 HOH 29 729 4 HOH HOH CCC . N 5 HOH 30 730 166 HOH HOH CCC . N 5 HOH 31 731 278 HOH HOH CCC . N 5 HOH 32 732 173 HOH HOH CCC . N 5 HOH 33 733 41 HOH HOH CCC . N 5 HOH 34 734 123 HOH HOH CCC . N 5 HOH 35 735 61 HOH HOH CCC . N 5 HOH 36 736 9 HOH HOH CCC . N 5 HOH 37 737 257 HOH HOH CCC . N 5 HOH 38 738 49 HOH HOH CCC . N 5 HOH 39 739 105 HOH HOH CCC . N 5 HOH 40 740 262 HOH HOH CCC . N 5 HOH 41 741 276 HOH HOH CCC . N 5 HOH 42 742 238 HOH HOH CCC . N 5 HOH 43 743 163 HOH HOH CCC . N 5 HOH 44 744 271 HOH HOH CCC . N 5 HOH 45 745 192 HOH HOH CCC . N 5 HOH 46 746 240 HOH HOH CCC . N 5 HOH 47 747 239 HOH HOH CCC . N 5 HOH 48 748 178 HOH HOH CCC . N 5 HOH 49 749 94 HOH HOH CCC . N 5 HOH 50 750 42 HOH HOH CCC . N 5 HOH 51 751 177 HOH HOH CCC . N 5 HOH 52 752 193 HOH HOH CCC . N 5 HOH 53 753 86 HOH HOH CCC . N 5 HOH 54 754 196 HOH HOH CCC . N 5 HOH 55 755 46 HOH HOH CCC . N 5 HOH 56 756 170 HOH HOH CCC . O 5 HOH 1 701 7 HOH HOH DDD . O 5 HOH 2 702 126 HOH HOH DDD . O 5 HOH 3 703 200 HOH HOH DDD . O 5 HOH 4 704 17 HOH HOH DDD . O 5 HOH 5 705 168 HOH HOH DDD . O 5 HOH 6 706 83 HOH HOH DDD . O 5 HOH 7 707 29 HOH HOH DDD . O 5 HOH 8 708 31 HOH HOH DDD . O 5 HOH 9 709 82 HOH HOH DDD . O 5 HOH 10 710 20 HOH HOH DDD . O 5 HOH 11 711 208 HOH HOH DDD . O 5 HOH 12 712 93 HOH HOH DDD . O 5 HOH 13 713 136 HOH HOH DDD . O 5 HOH 14 714 87 HOH HOH DDD . O 5 HOH 15 715 15 HOH HOH DDD . O 5 HOH 16 716 201 HOH HOH DDD . O 5 HOH 17 717 6 HOH HOH DDD . O 5 HOH 18 718 5 HOH HOH DDD . O 5 HOH 19 719 43 HOH HOH DDD . O 5 HOH 20 720 65 HOH HOH DDD . O 5 HOH 21 721 3 HOH HOH DDD . O 5 HOH 22 722 128 HOH HOH DDD . O 5 HOH 23 723 47 HOH HOH DDD . O 5 HOH 24 724 171 HOH HOH DDD . O 5 HOH 25 725 122 HOH HOH DDD . O 5 HOH 26 726 91 HOH HOH DDD . O 5 HOH 27 727 77 HOH HOH DDD . O 5 HOH 28 728 151 HOH HOH DDD . O 5 HOH 29 729 206 HOH HOH DDD . O 5 HOH 30 730 68 HOH HOH DDD . O 5 HOH 31 731 112 HOH HOH DDD . O 5 HOH 32 732 249 HOH HOH DDD . O 5 HOH 33 733 73 HOH HOH DDD . O 5 HOH 34 734 59 HOH HOH DDD . O 5 HOH 35 735 71 HOH HOH DDD . O 5 HOH 36 736 74 HOH HOH DDD . O 5 HOH 37 737 144 HOH HOH DDD . O 5 HOH 38 738 115 HOH HOH DDD . O 5 HOH 39 739 248 HOH HOH DDD . O 5 HOH 40 740 267 HOH HOH DDD . O 5 HOH 41 741 175 HOH HOH DDD . O 5 HOH 42 742 214 HOH HOH DDD . O 5 HOH 43 743 185 HOH HOH DDD . O 5 HOH 44 744 153 HOH HOH DDD . O 5 HOH 45 745 250 HOH HOH DDD . O 5 HOH 46 746 188 HOH HOH DDD . O 5 HOH 47 747 48 HOH HOH DDD . O 5 HOH 48 748 81 HOH HOH DDD . O 5 HOH 49 749 101 HOH HOH DDD . O 5 HOH 50 750 95 HOH HOH DDD . O 5 HOH 51 751 152 HOH HOH DDD . O 5 HOH 52 752 251 HOH HOH DDD . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 7.0.078 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7NYM _cell.details ? _cell.formula_units_Z ? _cell.length_a 33.120 _cell.length_a_esd ? _cell.length_b 84.254 _cell.length_b_esd ? _cell.length_c 98.315 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NYM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7NYM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47 _exptl_crystal.description Needles _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES pH 7.5, 1-5 % PEG 400, 2-2.5 M ammonium sulfate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-11-30 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'SILICON CRYSTAL' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8731 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.8731 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7NYM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.45 _reflns.d_resolution_low 63.976 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 45428 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 94 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.99 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.454 _reflns_shell.d_res_low 1.518 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.3 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2272 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.46 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.658 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] 1.586 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] -0.928 _refine.B_iso_max ? _refine.B_iso_mean 21.598 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.975 _refine.correlation_coeff_Fo_to_Fc_free 0.955 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7NYM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.614 _refine.ls_d_res_low 63.976 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 36326 _refine.ls_number_reflns_R_free 1815 _refine.ls_number_reflns_R_work 34511 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.967 _refine.ls_percent_reflns_R_free 4.996 _refine.ls_R_factor_all 0.135 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.1976 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1314 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 7NYK _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.090 _refine.pdbx_overall_ESU_R_Free 0.085 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 3.629 _refine.overall_SU_ML 0.055 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2020 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 84 _refine_hist.number_atoms_solvent 218 _refine_hist.number_atoms_total 2322 _refine_hist.d_res_high 1.614 _refine_hist.d_res_low 63.976 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.011 0.013 2184 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.017 1921 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.680 1.683 2948 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.373 1.635 4434 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 9.433 5.000 240 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 23.760 21.438 153 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.267 15.000 323 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 14.482 15.000 21 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.090 0.200 255 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 0.020 2401 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 518 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.318 0.200 296 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.227 0.200 1766 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.169 0.200 929 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.086 0.200 1033 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.177 0.200 138 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.173 0.200 11 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.250 0.200 44 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.200 0.200 12 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 2.381 1.775 964 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.378 1.769 963 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.922 2.638 1192 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.921 2.642 1193 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 5.535 2.456 1220 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 5.538 2.450 1216 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 6.761 3.481 1752 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 6.761 3.472 1747 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 5.652 22.023 2264 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 5.653 22.050 2265 ? r_lrange_other ? ? 'X-RAY DIFFRACTION' ? 2.844 3.000 4105 ? r_rigid_bond_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.614 1.655 2661 . 152 2509 100.0000 . 0.164 . 0.234 . 0.160 . . . . . 0.154 . 20 . 0.929 0.895 'X-RAY DIFFRACTION' 1.655 1.701 2561 . 119 2442 100.0000 . 0.147 . 0.225 . 0.143 . . . . . 0.135 . 20 . 0.942 0.916 'X-RAY DIFFRACTION' 1.701 1.750 2531 . 130 2401 100.0000 . 0.150 . 0.225 . 0.146 . . . . . 0.134 . 20 . 0.944 0.929 'X-RAY DIFFRACTION' 1.750 1.804 2397 . 115 2282 100.0000 . 0.145 . 0.205 . 0.141 . . . . . 0.128 . 20 . 0.943 0.931 'X-RAY DIFFRACTION' 1.804 1.863 2367 . 106 2261 100.0000 . 0.124 . 0.215 . 0.120 . . . . . 0.107 . 20 . 0.959 0.929 'X-RAY DIFFRACTION' 1.863 1.928 2296 . 105 2191 100.0000 . 0.108 . 0.189 . 0.104 . . . . . 0.092 . 20 . 0.969 0.949 'X-RAY DIFFRACTION' 1.928 2.001 2213 . 117 2096 100.0000 . 0.111 . 0.211 . 0.105 . . . . . 0.096 . 20 . 0.971 0.949 'X-RAY DIFFRACTION' 2.001 2.083 2151 . 107 2044 100.0000 . 0.105 . 0.162 . 0.101 . . . . . 0.095 . 20 . 0.977 0.972 'X-RAY DIFFRACTION' 2.083 2.175 2030 . 97 1933 100.0000 . 0.104 . 0.172 . 0.101 . . . . . 0.097 . 20 . 0.975 0.964 'X-RAY DIFFRACTION' 2.175 2.281 1966 . 111 1855 100.0000 . 0.110 . 0.191 . 0.105 . . . . . 0.103 . 20 . 0.973 0.960 'X-RAY DIFFRACTION' 2.281 2.404 1883 . 100 1783 100.0000 . 0.099 . 0.158 . 0.095 . . . . . 0.094 . 20 . 0.979 0.969 'X-RAY DIFFRACTION' 2.404 2.550 1790 . 78 1712 100.0000 . 0.102 . 0.187 . 0.098 . . . . . 0.099 . 20 . 0.978 0.963 'X-RAY DIFFRACTION' 2.550 2.726 1668 . 88 1580 100.0000 . 0.118 . 0.193 . 0.114 . . . . . 0.116 . 20 . 0.973 0.953 'X-RAY DIFFRACTION' 2.726 2.944 1552 . 66 1485 99.9356 . 0.130 . 0.206 . 0.127 . . . . . 0.137 . 20 . 0.972 0.962 'X-RAY DIFFRACTION' 2.944 3.224 1459 . 74 1383 99.8629 . 0.135 . 0.207 . 0.131 . . . . . 0.145 . 20 . 0.973 0.953 'X-RAY DIFFRACTION' 3.224 3.604 1329 . 70 1259 100.0000 . 0.152 . 0.221 . 0.148 . . . . . 0.170 . 20 . 0.969 0.955 'X-RAY DIFFRACTION' 3.604 4.159 1184 . 71 1113 100.0000 . 0.144 . 0.183 . 0.141 . . . . . 0.172 . 20 . 0.972 0.962 'X-RAY DIFFRACTION' 4.159 5.088 994 . 39 955 100.0000 . 0.138 . 0.188 . 0.137 . . . . . 0.172 . 20 . 0.979 0.968 'X-RAY DIFFRACTION' 5.088 7.173 814 . 48 766 100.0000 . 0.198 . 0.233 . 0.196 . . . . . 0.240 . 20 . 0.966 0.953 'X-RAY DIFFRACTION' 7.173 63.976 492 . 22 461 98.1707 . 0.276 . 0.218 . 0.279 . . . . . 0.445 . 20 . 0.933 0.949 # _struct.entry_id 7NYM _struct.title 'Mutant V517A - SH3 domain of JNK-interacting Protein 1 (JIP1)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7NYM _struct_keywords.text 'SH3 domain of JNK-interacting protein 1 (JIP1), SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 3 ? K N N 2 ? L N N 5 ? M N N 5 ? N N N 5 ? O N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code JIP1_HUMAN _struct_ref.pdbx_db_accession Q9UQF2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code EQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVTK _struct_ref.pdbx_align_begin 490 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7NYM AAA 4 ? 63 ? Q9UQF2 490 ? 549 ? 490 549 2 1 7NYM BBB 4 ? 63 ? Q9UQF2 490 ? 549 ? 1 62 3 1 7NYM CCC 4 ? 63 ? Q9UQF2 490 ? 549 ? 490 551 4 1 7NYM DDD 4 ? 63 ? Q9UQF2 490 ? 549 ? 490 549 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7NYM GLY AAA 1 ? UNP Q9UQF2 ? ? 'expression tag' 487 1 1 7NYM HIS AAA 2 ? UNP Q9UQF2 ? ? 'expression tag' 488 2 1 7NYM MET AAA 3 ? UNP Q9UQF2 ? ? 'expression tag' 489 3 1 7NYM ALA AAA 31 ? UNP Q9UQF2 VAL 517 'engineered mutation' 517 4 2 7NYM GLY BBB 1 ? UNP Q9UQF2 ? ? 'expression tag' -2 5 2 7NYM HIS BBB 2 ? UNP Q9UQF2 ? ? 'expression tag' -1 6 2 7NYM MET BBB 3 ? UNP Q9UQF2 ? ? 'expression tag' 0 7 2 7NYM ALA BBB 31 ? UNP Q9UQF2 VAL 517 'engineered mutation' 28 8 3 7NYM GLY CCC 1 ? UNP Q9UQF2 ? ? 'expression tag' 487 9 3 7NYM HIS CCC 2 ? UNP Q9UQF2 ? ? 'expression tag' 488 10 3 7NYM MET CCC 3 ? UNP Q9UQF2 ? ? 'expression tag' 489 11 3 7NYM ALA CCC 31 ? UNP Q9UQF2 VAL 517 'engineered mutation' 517 12 4 7NYM GLY DDD 1 ? UNP Q9UQF2 ? ? 'expression tag' -2 13 4 7NYM HIS DDD 2 ? UNP Q9UQF2 ? ? 'expression tag' -1 14 4 7NYM MET DDD 3 ? UNP Q9UQF2 ? ? 'expression tag' 0 15 4 7NYM ALA DDD 31 ? UNP Q9UQF2 VAL 517 'engineered mutation' 517 16 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3290 ? 1 MORE -34 ? 1 'SSA (A^2)' 7280 ? 2 'ABSA (A^2)' 1870 ? 2 MORE -20 ? 2 'SSA (A^2)' 6960 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,G,H,I,L,M 2 1 C,D,J,K,N,O # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ;chain A forms a dimer with chain B chain C forms a dimer with chain D ; # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? AA3 ? 5 ? AA4 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 50 ? PRO A 54 ? ARG AAA 536 PRO AAA 540 AA1 2 TRP A 39 ? ASN A 44 ? TRP AAA 525 ASN AAA 530 AA1 3 PRO A 28 ? GLN A 34 ? PRO AAA 514 GLN AAA 520 AA1 4 HIS A 7 ? ALA A 9 ? HIS AAA 493 ALA AAA 495 AA1 5 ALA A 58 ? GLU A 60 ? ALA AAA 544 GLU AAA 546 AA2 1 ARG B 50 ? PRO B 54 ? ARG BBB 47 PRO BBB 51 AA2 2 TRP B 39 ? ASN B 44 ? TRP BBB 36 ASN BBB 41 AA2 3 PRO B 28 ? LEU B 33 ? PRO BBB 25 LEU BBB 30 AA2 4 HIS B 7 ? ALA B 9 ? HIS BBB 4 ALA BBB 6 AA2 5 ALA B 58 ? GLU B 60 ? ALA BBB 55 GLU BBB 57 AA3 1 ARG C 50 ? PRO C 54 ? ARG CCC 536 PRO CCC 540 AA3 2 TRP C 39 ? ASN C 44 ? TRP CCC 525 ASN CCC 530 AA3 3 PRO C 28 ? GLN C 34 ? PRO CCC 514 GLN CCC 520 AA3 4 HIS C 7 ? ALA C 9 ? HIS CCC 493 ALA CCC 495 AA3 5 ALA C 58 ? GLU C 60 ? ALA CCC 544 GLU CCC 546 AA4 1 ARG D 50 ? PRO D 54 ? ARG DDD 536 PRO DDD 540 AA4 2 TRP D 39 ? ASN D 44 ? TRP DDD 525 ASN DDD 530 AA4 3 PRO D 28 ? GLN D 34 ? PRO DDD 514 GLN DDD 520 AA4 4 HIS D 7 ? ALA D 9 ? HIS DDD 493 ALA DDD 495 AA4 5 ALA D 58 ? GLU D 60 ? ALA DDD 544 GLU DDD 546 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLY A 51 ? O GLY AAA 537 N ALA A 42 ? N ALA AAA 528 AA1 2 3 O TRP A 39 ? O TRP AAA 525 N GLN A 34 ? N GLN AAA 520 AA1 3 4 O LEU A 29 ? O LEU AAA 515 N HIS A 7 ? N HIS AAA 493 AA1 4 5 N ARG A 8 ? N ARG AAA 494 O ILE A 59 ? O ILE AAA 545 AA2 1 2 O PHE B 53 ? O PHE BBB 50 N TYR B 40 ? N TYR BBB 37 AA2 2 3 O TYR B 43 ? O TYR BBB 40 N LEU B 30 ? N LEU BBB 27 AA2 3 4 O LEU B 29 ? O LEU BBB 26 N HIS B 7 ? N HIS BBB 4 AA2 4 5 N ARG B 8 ? N ARG BBB 5 O ILE B 59 ? O ILE BBB 56 AA3 1 2 O GLY C 51 ? O GLY CCC 537 N ALA C 42 ? N ALA CCC 528 AA3 2 3 O TRP C 39 ? O TRP CCC 525 N GLN C 34 ? N GLN CCC 520 AA3 3 4 O LEU C 29 ? O LEU CCC 515 N HIS C 7 ? N HIS CCC 493 AA3 4 5 N ARG C 8 ? N ARG CCC 494 O ILE C 59 ? O ILE CCC 545 AA4 1 2 O PHE D 53 ? O PHE DDD 539 N TYR D 40 ? N TYR DDD 526 AA4 2 3 O TRP D 39 ? O TRP DDD 525 N GLN D 34 ? N GLN DDD 520 AA4 3 4 O LEU D 29 ? O LEU DDD 515 N HIS D 7 ? N HIS DDD 493 AA4 4 5 N ARG D 8 ? N ARG DDD 494 O ILE D 59 ? O ILE DDD 545 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O BBB HOH 249 ? ? O BBB HOH 255 ? ? 2.06 2 1 O DDD HOH 745 ? ? O DDD HOH 752 ? ? 2.13 3 1 O BBB HOH 222 ? ? O BBB HOH 257 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C BBB MET 0 ? ? N BBB GLU 1 ? ? 1.547 1.336 0.211 0.023 Y 2 1 C BBB VAL 58 ? ? N BBB THR 61 ? ? 1.523 1.336 0.187 0.023 Y 3 1 C CCC VAL 547 ? ? N CCC THR 550 ? ? 1.569 1.336 0.233 0.023 Y 4 1 C DDD MET 0 ? ? N DDD GLU 490 ? ? 1.541 1.336 0.205 0.023 Y # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 O _pdbx_validate_rmsd_angle.auth_asym_id_1 CCC _pdbx_validate_rmsd_angle.auth_comp_id_1 VAL _pdbx_validate_rmsd_angle.auth_seq_id_1 547 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 C _pdbx_validate_rmsd_angle.auth_asym_id_2 CCC _pdbx_validate_rmsd_angle.auth_comp_id_2 VAL _pdbx_validate_rmsd_angle.auth_seq_id_2 547 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N _pdbx_validate_rmsd_angle.auth_asym_id_3 CCC _pdbx_validate_rmsd_angle.auth_comp_id_3 THR _pdbx_validate_rmsd_angle.auth_seq_id_3 550 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 109.91 _pdbx_validate_rmsd_angle.angle_target_value 122.70 _pdbx_validate_rmsd_angle.angle_deviation -12.79 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.60 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP AAA 512 ? ? 84.88 6.30 2 1 ASP CCC 512 ? ? 86.35 3.96 3 1 ASP DDD 512 ? ? 81.63 7.37 # _pdbx_entry_details.entry_id 7NYM _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? AAA HOH 747 ? 6.99 . 2 1 O ? BBB HOH 263 ? 6.15 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 AAA GLY 487 ? A GLY 1 2 1 Y 1 AAA HIS 488 ? A HIS 2 3 1 Y 1 AAA MET 489 ? A MET 3 4 1 Y 1 AAA GLU 490 ? A GLU 4 5 1 Y 1 AAA LYS 549 ? A LYS 63 6 1 Y 1 BBB LYS 62 ? B LYS 63 7 1 Y 1 CCC GLY 487 ? C GLY 1 8 1 Y 1 CCC HIS 488 ? C HIS 2 9 1 Y 1 CCC MET 489 ? C MET 3 10 1 Y 1 CCC LYS 551 ? C LYS 63 11 1 Y 1 DDD LYS 549 ? D LYS 63 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 P6G O1 O N N 236 P6G C2 C N N 237 P6G C3 C N N 238 P6G O4 O N N 239 P6G C5 C N N 240 P6G C6 C N N 241 P6G O7 O N N 242 P6G C8 C N N 243 P6G C9 C N N 244 P6G O10 O N N 245 P6G C11 C N N 246 P6G C12 C N N 247 P6G O13 O N N 248 P6G C14 C N N 249 P6G C15 C N N 250 P6G O16 O N N 251 P6G C17 C N N 252 P6G C18 C N N 253 P6G O19 O N N 254 P6G H1 H N N 255 P6G H21 H N N 256 P6G H22 H N N 257 P6G H31 H N N 258 P6G H32 H N N 259 P6G H51 H N N 260 P6G H52 H N N 261 P6G H61 H N N 262 P6G H62 H N N 263 P6G H81 H N N 264 P6G H82 H N N 265 P6G H91 H N N 266 P6G H92 H N N 267 P6G H111 H N N 268 P6G H112 H N N 269 P6G H121 H N N 270 P6G H122 H N N 271 P6G H141 H N N 272 P6G H142 H N N 273 P6G H151 H N N 274 P6G H152 H N N 275 P6G H171 H N N 276 P6G H172 H N N 277 P6G H181 H N N 278 P6G H182 H N N 279 P6G H19 H N N 280 PHE N N N N 281 PHE CA C N S 282 PHE C C N N 283 PHE O O N N 284 PHE CB C N N 285 PHE CG C Y N 286 PHE CD1 C Y N 287 PHE CD2 C Y N 288 PHE CE1 C Y N 289 PHE CE2 C Y N 290 PHE CZ C Y N 291 PHE OXT O N N 292 PHE H H N N 293 PHE H2 H N N 294 PHE HA H N N 295 PHE HB2 H N N 296 PHE HB3 H N N 297 PHE HD1 H N N 298 PHE HD2 H N N 299 PHE HE1 H N N 300 PHE HE2 H N N 301 PHE HZ H N N 302 PHE HXT H N N 303 PO4 P P N N 304 PO4 O1 O N N 305 PO4 O2 O N N 306 PO4 O3 O N N 307 PO4 O4 O N N 308 PRO N N N N 309 PRO CA C N S 310 PRO C C N N 311 PRO O O N N 312 PRO CB C N N 313 PRO CG C N N 314 PRO CD C N N 315 PRO OXT O N N 316 PRO H H N N 317 PRO HA H N N 318 PRO HB2 H N N 319 PRO HB3 H N N 320 PRO HG2 H N N 321 PRO HG3 H N N 322 PRO HD2 H N N 323 PRO HD3 H N N 324 PRO HXT H N N 325 SO4 S S N N 326 SO4 O1 O N N 327 SO4 O2 O N N 328 SO4 O3 O N N 329 SO4 O4 O N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 P6G O1 C2 sing N N 224 P6G O1 H1 sing N N 225 P6G C2 C3 sing N N 226 P6G C2 H21 sing N N 227 P6G C2 H22 sing N N 228 P6G C3 O4 sing N N 229 P6G C3 H31 sing N N 230 P6G C3 H32 sing N N 231 P6G O4 C5 sing N N 232 P6G C5 C6 sing N N 233 P6G C5 H51 sing N N 234 P6G C5 H52 sing N N 235 P6G C6 O7 sing N N 236 P6G C6 H61 sing N N 237 P6G C6 H62 sing N N 238 P6G O7 C8 sing N N 239 P6G C8 C9 sing N N 240 P6G C8 H81 sing N N 241 P6G C8 H82 sing N N 242 P6G C9 O10 sing N N 243 P6G C9 H91 sing N N 244 P6G C9 H92 sing N N 245 P6G O10 C11 sing N N 246 P6G C11 C12 sing N N 247 P6G C11 H111 sing N N 248 P6G C11 H112 sing N N 249 P6G C12 O13 sing N N 250 P6G C12 H121 sing N N 251 P6G C12 H122 sing N N 252 P6G O13 C14 sing N N 253 P6G C14 C15 sing N N 254 P6G C14 H141 sing N N 255 P6G C14 H142 sing N N 256 P6G C15 O16 sing N N 257 P6G C15 H151 sing N N 258 P6G C15 H152 sing N N 259 P6G O16 C17 sing N N 260 P6G C17 C18 sing N N 261 P6G C17 H171 sing N N 262 P6G C17 H172 sing N N 263 P6G C18 O19 sing N N 264 P6G C18 H181 sing N N 265 P6G C18 H182 sing N N 266 P6G O19 H19 sing N N 267 PHE N CA sing N N 268 PHE N H sing N N 269 PHE N H2 sing N N 270 PHE CA C sing N N 271 PHE CA CB sing N N 272 PHE CA HA sing N N 273 PHE C O doub N N 274 PHE C OXT sing N N 275 PHE CB CG sing N N 276 PHE CB HB2 sing N N 277 PHE CB HB3 sing N N 278 PHE CG CD1 doub Y N 279 PHE CG CD2 sing Y N 280 PHE CD1 CE1 sing Y N 281 PHE CD1 HD1 sing N N 282 PHE CD2 CE2 doub Y N 283 PHE CD2 HD2 sing N N 284 PHE CE1 CZ doub Y N 285 PHE CE1 HE1 sing N N 286 PHE CE2 CZ sing Y N 287 PHE CE2 HE2 sing N N 288 PHE CZ HZ sing N N 289 PHE OXT HXT sing N N 290 PO4 P O1 doub N N 291 PO4 P O2 sing N N 292 PO4 P O3 sing N N 293 PO4 P O4 sing N N 294 PRO N CA sing N N 295 PRO N CD sing N N 296 PRO N H sing N N 297 PRO CA C sing N N 298 PRO CA CB sing N N 299 PRO CA HA sing N N 300 PRO C O doub N N 301 PRO C OXT sing N N 302 PRO CB CG sing N N 303 PRO CB HB2 sing N N 304 PRO CB HB3 sing N N 305 PRO CG CD sing N N 306 PRO CG HG2 sing N N 307 PRO CG HG3 sing N N 308 PRO CD HD2 sing N N 309 PRO CD HD3 sing N N 310 PRO OXT HXT sing N N 311 SO4 S O1 doub N N 312 SO4 S O2 doub N N 313 SO4 S O3 sing N N 314 SO4 S O4 sing N N 315 THR N CA sing N N 316 THR N H sing N N 317 THR N H2 sing N N 318 THR CA C sing N N 319 THR CA CB sing N N 320 THR CA HA sing N N 321 THR C O doub N N 322 THR C OXT sing N N 323 THR CB OG1 sing N N 324 THR CB CG2 sing N N 325 THR CB HB sing N N 326 THR OG1 HG1 sing N N 327 THR CG2 HG21 sing N N 328 THR CG2 HG22 sing N N 329 THR CG2 HG23 sing N N 330 THR OXT HXT sing N N 331 TRP N CA sing N N 332 TRP N H sing N N 333 TRP N H2 sing N N 334 TRP CA C sing N N 335 TRP CA CB sing N N 336 TRP CA HA sing N N 337 TRP C O doub N N 338 TRP C OXT sing N N 339 TRP CB CG sing N N 340 TRP CB HB2 sing N N 341 TRP CB HB3 sing N N 342 TRP CG CD1 doub Y N 343 TRP CG CD2 sing Y N 344 TRP CD1 NE1 sing Y N 345 TRP CD1 HD1 sing N N 346 TRP CD2 CE2 doub Y N 347 TRP CD2 CE3 sing Y N 348 TRP NE1 CE2 sing Y N 349 TRP NE1 HE1 sing N N 350 TRP CE2 CZ2 sing Y N 351 TRP CE3 CZ3 doub Y N 352 TRP CE3 HE3 sing N N 353 TRP CZ2 CH2 doub Y N 354 TRP CZ2 HZ2 sing N N 355 TRP CZ3 CH2 sing Y N 356 TRP CZ3 HZ3 sing N N 357 TRP CH2 HH2 sing N N 358 TRP OXT HXT sing N N 359 TYR N CA sing N N 360 TYR N H sing N N 361 TYR N H2 sing N N 362 TYR CA C sing N N 363 TYR CA CB sing N N 364 TYR CA HA sing N N 365 TYR C O doub N N 366 TYR C OXT sing N N 367 TYR CB CG sing N N 368 TYR CB HB2 sing N N 369 TYR CB HB3 sing N N 370 TYR CG CD1 doub Y N 371 TYR CG CD2 sing Y N 372 TYR CD1 CE1 sing Y N 373 TYR CD1 HD1 sing N N 374 TYR CD2 CE2 doub Y N 375 TYR CD2 HD2 sing N N 376 TYR CE1 CZ doub Y N 377 TYR CE1 HE1 sing N N 378 TYR CE2 CZ sing Y N 379 TYR CE2 HE2 sing N N 380 TYR CZ OH sing N N 381 TYR OH HH sing N N 382 TYR OXT HXT sing N N 383 VAL N CA sing N N 384 VAL N H sing N N 385 VAL N H2 sing N N 386 VAL CA C sing N N 387 VAL CA CB sing N N 388 VAL CA HA sing N N 389 VAL C O doub N N 390 VAL C OXT sing N N 391 VAL CB CG1 sing N N 392 VAL CB CG2 sing N N 393 VAL CB HB sing N N 394 VAL CG1 HG11 sing N N 395 VAL CG1 HG12 sing N N 396 VAL CG1 HG13 sing N N 397 VAL CG2 HG21 sing N N 398 VAL CG2 HG22 sing N N 399 VAL CG2 HG23 sing N N 400 VAL OXT HXT sing N N 401 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Agence Nationale de la Recherche (ANR)' France RC18114CC 1 'Agence Nationale de la Recherche (ANR)' France MAPKAssembly 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7NYK _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 7NYM _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.030193 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011869 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010171 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 P 15 15 6.435 1.907 4.179 27.157 1.780 0.526 1.491 68.164 1.240 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 1.018 # loop_