HEADER CHAPERONE 01-APR-21 7O3D TITLE COOPERATION BETWEEN THE INTRINSICALLY DISORDERED AND ORDERED REGIONS TITLE 2 OF SPT6 REGULATES NUCLEOSOME AND POL II CTD BINDING, AND NUCLEOSOME TITLE 3 ASSEMBLY COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION FACTOR SPT6; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CHROMATIN ELONGATION FACTOR SPT6; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: THE SEQUENCE STRETCHES OF THE SAMPLE THAT DO NOT MAKE COMPND 7 PART OF THE COORDINATES ARE FLEXIBLE REGIONS THAT WERE NOT OBSERVED COMPND 8 IN THE CRYOEM MAP SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 VARIANT: WILD-TYPE; SOURCE 8 ATCC: 204508 / S288C; SOURCE 9 GENE: SPT6, CRE2, SSN20, YGR116W, G6169; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 12 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS-RIL KEYWDS SPT6, ELONGATION FACTOR, RNA POL II, NUCLEOSOME, CTD, CHAPERONE EXPDTA ELECTRON MICROSCOPY AUTHOR A.KASILIAUSKAITE,K.KUBICEK,T.KLUMPLER,M.ZANOVA,D.ZAPLETAL,J.NOVACEK, AUTHOR 2 R.STEFL REVDAT 2 15-JUN-22 7O3D 1 JRNL REVDAT 1 13-APR-22 7O3D 0 JRNL AUTH A.KASILIAUSKAITE,K.KUBICEK,T.KLUMPLER,M.ZANOVA,D.ZAPLETAL, JRNL AUTH 2 E.KOUTNA,J.NOVACEK,R.STEFL JRNL TITL COOPERATION BETWEEN INTRINSICALLY DISORDERED AND ORDERED JRNL TITL 2 REGIONS OF SPT6 REGULATES NUCLEOSOME AND POL II CTD BINDING, JRNL TITL 3 AND NUCLEOSOME ASSEMBLY. JRNL REF NUCLEIC ACIDS RES. V. 50 5961 2022 JRNL REFN ESSN 1362-4962 JRNL PMID 35640611 JRNL DOI 10.1093/NAR/GKAC451 REMARK 2 REMARK 2 RESOLUTION. 3.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, CRYOSPARC, CRYOLO, COOT, REMARK 3 CRYOSPARC, ISOLDE, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC, PHENIX, ISOLDE REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 3PSI REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : CORRELATION COEFFICIENTS REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.710 REMARK 3 NUMBER OF PARTICLES : 718639 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7O3D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-APR-21. REMARK 100 THE DEPOSITION ID IS D_1292115033. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : STRUCTURE OF ELONGATION FACTOR REMARK 245 SPT6 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.15 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 13807 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 292 REMARK 465 ILE A 293 REMARK 465 ASP A 294 REMARK 465 PRO A 295 REMARK 465 PHE A 296 REMARK 465 THR A 297 REMARK 465 ASP A 298 REMARK 465 ILE A 299 REMARK 465 TYR A 300 REMARK 465 ASP A 301 REMARK 465 LEU A 302 REMARK 465 GLU A 303 REMARK 465 ASP A 304 REMARK 465 LEU A 305 REMARK 465 LYS A 306 REMARK 465 LYS A 307 REMARK 465 ASN A 308 REMARK 465 LEU A 309 REMARK 465 MET A 310 REMARK 465 THR A 311 REMARK 465 GLU A 312 REMARK 465 GLY A 313 REMARK 465 ASP A 314 REMARK 465 MET A 315 REMARK 465 LYS A 316 REMARK 465 ILE A 317 REMARK 465 ARG A 318 REMARK 465 LYS A 319 REMARK 465 PHE A 437 REMARK 465 TYR A 438 REMARK 465 ALA A 439 REMARK 465 GLU A 440 REMARK 465 LEU A 441 REMARK 465 HIS A 442 REMARK 465 ILE A 443 REMARK 465 ASP A 444 REMARK 465 ASP A 445 REMARK 465 PRO A 446 REMARK 465 ILE A 447 REMARK 465 VAL A 448 REMARK 465 THR A 449 REMARK 465 GLU A 450 REMARK 465 TYR A 451 REMARK 465 PHE A 452 REMARK 465 LYS A 453 REMARK 465 ASN A 454 REMARK 465 GLN A 455 REMARK 465 ASN A 456 REMARK 465 THR A 457 REMARK 465 ALA A 458 REMARK 465 SER A 459 REMARK 465 ILE A 460 REMARK 465 ALA A 461 REMARK 465 GLU A 462 REMARK 465 LEU A 463 REMARK 465 ASN A 464 REMARK 465 SER A 465 REMARK 465 LEU A 466 REMARK 465 GLN A 467 REMARK 465 ASP A 468 REMARK 465 ILE A 469 REMARK 465 TYR A 470 REMARK 465 ASP A 471 REMARK 465 TYR A 472 REMARK 465 LEU A 473 REMARK 465 GLU A 474 REMARK 465 PHE A 475 REMARK 465 LYS A 476 REMARK 465 TYR A 477 REMARK 465 ALA A 478 REMARK 465 ASN A 479 REMARK 465 GLU A 480 REMARK 465 ILE A 481 REMARK 465 ASN A 482 REMARK 465 GLU A 483 REMARK 465 MET A 484 REMARK 465 PHE A 485 REMARK 465 ILE A 486 REMARK 465 ASN A 487 REMARK 465 HIS A 488 REMARK 465 THR A 489 REMARK 465 GLY A 490 REMARK 465 LYS A 491 REMARK 465 THR A 492 REMARK 465 GLY A 493 REMARK 465 LYS A 494 REMARK 465 LYS A 495 REMARK 465 HIS A 496 REMARK 465 LEU A 497 REMARK 465 LYS A 498 REMARK 465 ASN A 499 REMARK 465 SER A 500 REMARK 465 SER A 501 REMARK 465 TYR A 502 REMARK 465 GLU A 503 REMARK 465 LYS A 504 REMARK 465 PHE A 505 REMARK 465 LYS A 506 REMARK 465 ALA A 507 REMARK 465 SER A 508 REMARK 465 PRO A 509 REMARK 465 LEU A 510 REMARK 465 TYR A 511 REMARK 465 GLN A 512 REMARK 465 ALA A 513 REMARK 465 VAL A 514 REMARK 465 SER A 515 REMARK 465 ASP A 516 REMARK 465 ILE A 517 REMARK 465 GLY A 518 REMARK 465 ILE A 519 REMARK 465 SER A 520 REMARK 465 ALA A 521 REMARK 465 GLU A 522 REMARK 465 ASP A 523 REMARK 465 VAL A 524 REMARK 465 GLY A 525 REMARK 465 GLU A 526 REMARK 465 ASN A 527 REMARK 465 ILE A 528 REMARK 465 SER A 529 REMARK 465 SER A 530 REMARK 465 GLN A 531 REMARK 465 HIS A 532 REMARK 465 GLN A 533 REMARK 465 ILE A 534 REMARK 465 HIS A 535 REMARK 465 PRO A 536 REMARK 465 PRO A 537 REMARK 465 VAL A 538 REMARK 465 ASP A 539 REMARK 465 HIS A 540 REMARK 465 PRO A 541 REMARK 465 SER A 542 REMARK 465 SER A 543 REMARK 465 LYS A 544 REMARK 465 PRO A 545 REMARK 465 VAL A 546 REMARK 465 GLU A 547 REMARK 465 VAL A 548 REMARK 465 ILE A 549 REMARK 465 GLU A 550 REMARK 465 SER A 551 REMARK 465 ILE A 552 REMARK 465 LEU A 553 REMARK 465 ASN A 554 REMARK 465 ALA A 555 REMARK 465 ASN A 556 REMARK 465 SER A 557 REMARK 465 GLY A 558 REMARK 465 ASP A 559 REMARK 465 LEU A 560 REMARK 465 GLN A 561 REMARK 465 VAL A 562 REMARK 465 PHE A 563 REMARK 465 THR A 564 REMARK 465 SER A 565 REMARK 465 ASN A 566 REMARK 465 THR A 567 REMARK 465 LYS A 568 REMARK 465 LEU A 569 REMARK 465 ALA A 570 REMARK 465 ILE A 571 REMARK 465 ASP A 572 REMARK 465 THR A 573 REMARK 465 VAL A 574 REMARK 465 GLN A 575 REMARK 465 LYS A 576 REMARK 465 TYR A 577 REMARK 465 TYR A 578 REMARK 465 SER A 579 REMARK 465 LEU A 580 REMARK 465 GLU A 581 REMARK 465 LEU A 582 REMARK 465 SER A 583 REMARK 465 LYS A 584 REMARK 465 ASN A 585 REMARK 465 THR A 586 REMARK 465 LYS A 587 REMARK 465 ILE A 588 REMARK 465 ARG A 589 REMARK 465 GLU A 590 REMARK 465 LYS A 591 REMARK 465 VAL A 592 REMARK 465 ARG A 593 REMARK 465 SER A 594 REMARK 465 ASP A 595 REMARK 465 PHE A 596 REMARK 465 SER A 597 REMARK 465 LYS A 598 REMARK 465 TYR A 599 REMARK 465 TYR A 600 REMARK 465 LEU A 601 REMARK 465 ALA A 602 REMARK 465 ILE A 623 REMARK 465 LYS A 624 REMARK 465 TYR A 625 REMARK 465 ALA A 626 REMARK 465 ILE A 627 REMARK 465 GLN A 664 REMARK 465 TYR A 665 REMARK 465 ILE A 666 REMARK 465 GLU A 667 REMARK 465 HIS A 668 REMARK 465 LEU A 669 REMARK 465 PHE A 670 REMARK 465 GLN A 671 REMARK 465 ILE A 672 REMARK 465 ALA A 673 REMARK 465 LEU A 674 REMARK 465 GLU A 675 REMARK 465 THR A 676 REMARK 465 THR A 677 REMARK 465 ASN A 678 REMARK 465 THR A 679 REMARK 465 SER A 680 REMARK 465 ASP A 681 REMARK 465 ILE A 682 REMARK 465 ALA A 683 REMARK 465 ILE A 684 REMARK 465 GLU A 685 REMARK 465 TRP A 686 REMARK 465 ASN A 687 REMARK 465 ASN A 688 REMARK 465 PHE A 689 REMARK 465 ARG A 690 REMARK 465 LYS A 691 REMARK 465 LEU A 692 REMARK 465 ALA A 693 REMARK 465 PHE A 694 REMARK 465 ASN A 695 REMARK 465 GLN A 696 REMARK 465 ALA A 697 REMARK 465 MET A 698 REMARK 465 ASP A 699 REMARK 465 LYS A 1004 REMARK 465 ARG A 1005 REMARK 465 GLN A 1006 REMARK 465 LYS A 1007 REMARK 465 TYR A 1008 REMARK 465 GLU A 1009 REMARK 465 GLN A 1211 REMARK 465 GLN A 1212 REMARK 465 GLU A 1244 REMARK 465 ALA A 1245 REMARK 465 ARG A 1246 REMARK 465 ALA A 1247 REMARK 465 LYS A 1248 REMARK 465 ARG A 1249 REMARK 465 THR A 1250 REMARK 465 HIS A 1251 REMARK 465 ARG A 1252 REMARK 465 VAL A 1253 REMARK 465 ILE A 1254 REMARK 465 ASN A 1255 REMARK 465 HIS A 1256 REMARK 465 PRO A 1257 REMARK 465 TYR A 1258 REMARK 465 TYR A 1259 REMARK 465 PHE A 1260 REMARK 465 PRO A 1261 REMARK 465 PHE A 1262 REMARK 465 ASN A 1263 REMARK 465 GLY A 1264 REMARK 465 ARG A 1265 REMARK 465 GLN A 1266 REMARK 465 ALA A 1267 REMARK 465 GLU A 1268 REMARK 465 ASP A 1269 REMARK 465 TYR A 1270 REMARK 465 LEU A 1271 REMARK 465 ARG A 1272 REMARK 465 SER A 1273 REMARK 465 LYS A 1274 REMARK 465 GLU A 1275 REMARK 465 ARG A 1276 REMARK 465 GLY A 1277 REMARK 465 GLU A 1278 REMARK 465 PHE A 1279 REMARK 465 VAL A 1280 REMARK 465 ILE A 1281 REMARK 465 ARG A 1282 REMARK 465 GLN A 1283 REMARK 465 SER A 1284 REMARK 465 SER A 1285 REMARK 465 ARG A 1286 REMARK 465 GLY A 1287 REMARK 465 ASP A 1288 REMARK 465 ASP A 1289 REMARK 465 HIS A 1290 REMARK 465 LEU A 1291 REMARK 465 VAL A 1292 REMARK 465 ILE A 1293 REMARK 465 THR A 1294 REMARK 465 TRP A 1295 REMARK 465 LYS A 1296 REMARK 465 LEU A 1297 REMARK 465 ASP A 1298 REMARK 465 LYS A 1299 REMARK 465 ASP A 1300 REMARK 465 LEU A 1301 REMARK 465 PHE A 1302 REMARK 465 GLN A 1303 REMARK 465 HIS A 1304 REMARK 465 ILE A 1305 REMARK 465 ASP A 1306 REMARK 465 ILE A 1307 REMARK 465 GLN A 1308 REMARK 465 GLU A 1309 REMARK 465 LEU A 1310 REMARK 465 GLU A 1311 REMARK 465 LYS A 1312 REMARK 465 GLU A 1313 REMARK 465 ASN A 1314 REMARK 465 PRO A 1315 REMARK 465 LEU A 1316 REMARK 465 ALA A 1317 REMARK 465 LEU A 1318 REMARK 465 GLY A 1319 REMARK 465 LYS A 1320 REMARK 465 VAL A 1321 REMARK 465 LEU A 1322 REMARK 465 ILE A 1323 REMARK 465 VAL A 1324 REMARK 465 ASP A 1325 REMARK 465 ASN A 1326 REMARK 465 GLN A 1327 REMARK 465 LYS A 1328 REMARK 465 TYR A 1329 REMARK 465 ASN A 1330 REMARK 465 ASP A 1331 REMARK 465 LEU A 1332 REMARK 465 ASP A 1333 REMARK 465 GLN A 1334 REMARK 465 ILE A 1335 REMARK 465 ILE A 1336 REMARK 465 VAL A 1337 REMARK 465 GLU A 1338 REMARK 465 TYR A 1339 REMARK 465 LEU A 1340 REMARK 465 GLN A 1341 REMARK 465 ASN A 1342 REMARK 465 LYS A 1343 REMARK 465 VAL A 1344 REMARK 465 ARG A 1345 REMARK 465 LEU A 1346 REMARK 465 LEU A 1347 REMARK 465 ASN A 1348 REMARK 465 GLU A 1349 REMARK 465 MET A 1350 REMARK 465 THR A 1351 REMARK 465 SER A 1352 REMARK 465 SER A 1353 REMARK 465 GLU A 1354 REMARK 465 LYS A 1355 REMARK 465 PHE A 1356 REMARK 465 LYS A 1357 REMARK 465 SER A 1358 REMARK 465 GLY A 1359 REMARK 465 THR A 1360 REMARK 465 LYS A 1361 REMARK 465 LYS A 1362 REMARK 465 ASP A 1363 REMARK 465 VAL A 1364 REMARK 465 VAL A 1365 REMARK 465 LYS A 1366 REMARK 465 PHE A 1367 REMARK 465 ILE A 1368 REMARK 465 GLU A 1369 REMARK 465 ASP A 1370 REMARK 465 TYR A 1371 REMARK 465 SER A 1372 REMARK 465 ARG A 1373 REMARK 465 VAL A 1374 REMARK 465 ASN A 1375 REMARK 465 PRO A 1376 REMARK 465 ASN A 1377 REMARK 465 LYS A 1378 REMARK 465 SER A 1379 REMARK 465 VAL A 1380 REMARK 465 TYR A 1381 REMARK 465 TYR A 1382 REMARK 465 PHE A 1383 REMARK 465 SER A 1384 REMARK 465 LEU A 1385 REMARK 465 ASN A 1386 REMARK 465 HIS A 1387 REMARK 465 ASP A 1388 REMARK 465 ASN A 1389 REMARK 465 PRO A 1390 REMARK 465 GLY A 1391 REMARK 465 TRP A 1392 REMARK 465 PHE A 1393 REMARK 465 TYR A 1394 REMARK 465 LEU A 1395 REMARK 465 MET A 1396 REMARK 465 PHE A 1397 REMARK 465 LYS A 1398 REMARK 465 ILE A 1399 REMARK 465 ASN A 1400 REMARK 465 ALA A 1401 REMARK 465 ASN A 1402 REMARK 465 SER A 1403 REMARK 465 LYS A 1404 REMARK 465 LEU A 1405 REMARK 465 TYR A 1406 REMARK 465 THR A 1407 REMARK 465 TRP A 1408 REMARK 465 ASN A 1409 REMARK 465 VAL A 1410 REMARK 465 LYS A 1411 REMARK 465 LEU A 1412 REMARK 465 THR A 1413 REMARK 465 ASN A 1414 REMARK 465 THR A 1415 REMARK 465 GLY A 1416 REMARK 465 TYR A 1417 REMARK 465 PHE A 1418 REMARK 465 LEU A 1419 REMARK 465 VAL A 1420 REMARK 465 ASN A 1421 REMARK 465 TYR A 1422 REMARK 465 ASN A 1423 REMARK 465 TYR A 1424 REMARK 465 PRO A 1425 REMARK 465 SER A 1426 REMARK 465 VAL A 1427 REMARK 465 ILE A 1428 REMARK 465 GLN A 1429 REMARK 465 LEU A 1430 REMARK 465 CYS A 1431 REMARK 465 ASN A 1432 REMARK 465 GLY A 1433 REMARK 465 PHE A 1434 REMARK 465 LYS A 1435 REMARK 465 THR A 1436 REMARK 465 LEU A 1437 REMARK 465 LEU A 1438 REMARK 465 LYS A 1439 REMARK 465 SER A 1440 REMARK 465 ASN A 1441 REMARK 465 SER A 1442 REMARK 465 SER A 1443 REMARK 465 LYS A 1444 REMARK 465 ASN A 1445 REMARK 465 ARG A 1446 REMARK 465 MET A 1447 REMARK 465 ASN A 1448 REMARK 465 ASN A 1449 REMARK 465 TYR A 1450 REMARK 465 ARG A 1451 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 427 CG CD1 CD2 REMARK 470 LYS A 700 CG CD CE NZ REMARK 470 ILE A 701 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 866 HH22 ARG A 882 1.50 REMARK 500 HZ1 LYS A 728 O ILE A 904 1.59 REMARK 500 OD1 ASP A 412 NH1 ARG A 726 2.15 REMARK 500 O GLN A 703 OE1 GLN A 707 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A1152 CA - CB - SG ANGL. DEV. = 14.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 363 -144.81 51.72 REMARK 500 ASP A 405 17.32 48.70 REMARK 500 GLN A 615 28.02 46.62 REMARK 500 LYS A 616 26.80 44.92 REMARK 500 ASP A 637 61.26 -114.53 REMARK 500 MET A 659 28.07 -152.88 REMARK 500 GLU A1157 65.25 60.10 REMARK 500 ARG A1173 -170.02 64.54 REMARK 500 ARG A1174 154.03 80.64 REMARK 500 ILE A1179 -60.99 -94.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 396 0.10 SIDE CHAIN REMARK 500 ARG A1089 0.13 SIDE CHAIN REMARK 500 ARG A1109 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-12704 RELATED DB: EMDB REMARK 900 COOPERATION BETWEEN THE INTRINSICALLY DISORDERED AND ORDERED REMARK 900 REGIONS OF SPT6 REGULATES NUCLEOSOME AND POL II CTD BINDING, AND REMARK 900 NUCLEOSOME ASSEMBLY DBREF 7O3D A 298 1451 UNP P23615 SPT6_YEAST 298 1451 SEQADV 7O3D GLY A 292 UNP P23615 EXPRESSION TAG SEQADV 7O3D ILE A 293 UNP P23615 EXPRESSION TAG SEQADV 7O3D ASP A 294 UNP P23615 EXPRESSION TAG SEQADV 7O3D PRO A 295 UNP P23615 EXPRESSION TAG SEQADV 7O3D PHE A 296 UNP P23615 EXPRESSION TAG SEQADV 7O3D THR A 297 UNP P23615 EXPRESSION TAG SEQRES 1 A 1160 GLY ILE ASP PRO PHE THR ASP ILE TYR ASP LEU GLU ASP SEQRES 2 A 1160 LEU LYS LYS ASN LEU MET THR GLU GLY ASP MET LYS ILE SEQRES 3 A 1160 ARG LYS THR ASP ILE PRO GLU ARG TYR GLN GLU LEU ARG SEQRES 4 A 1160 ALA GLY ILE THR ASP TYR GLY ASN MET SER SER GLU ASP SEQRES 5 A 1160 GLN GLU LEU GLU ARG ASN TRP ILE ALA GLU LYS ILE SER SEQRES 6 A 1160 VAL ASP LYS ASN PHE ASP ALA ASN TYR ASP LEU THR GLU SEQRES 7 A 1160 PHE LYS GLU ALA ILE GLY ASN ALA ILE LYS PHE ILE THR SEQRES 8 A 1160 LYS GLU ASN LEU GLU VAL PRO PHE ILE TYR ALA TYR ARG SEQRES 9 A 1160 ARG ASN TYR ILE SER SER ARG GLU LYS ASP GLY PHE LEU SEQRES 10 A 1160 LEU THR GLU ASP ASP LEU TRP ASP ILE VAL SER LEU ASP SEQRES 11 A 1160 ILE GLU PHE HIS SER LEU VAL ASN LYS LYS ASP TYR VAL SEQRES 12 A 1160 GLN ARG PHE TYR ALA GLU LEU HIS ILE ASP ASP PRO ILE SEQRES 13 A 1160 VAL THR GLU TYR PHE LYS ASN GLN ASN THR ALA SER ILE SEQRES 14 A 1160 ALA GLU LEU ASN SER LEU GLN ASP ILE TYR ASP TYR LEU SEQRES 15 A 1160 GLU PHE LYS TYR ALA ASN GLU ILE ASN GLU MET PHE ILE SEQRES 16 A 1160 ASN HIS THR GLY LYS THR GLY LYS LYS HIS LEU LYS ASN SEQRES 17 A 1160 SER SER TYR GLU LYS PHE LYS ALA SER PRO LEU TYR GLN SEQRES 18 A 1160 ALA VAL SER ASP ILE GLY ILE SER ALA GLU ASP VAL GLY SEQRES 19 A 1160 GLU ASN ILE SER SER GLN HIS GLN ILE HIS PRO PRO VAL SEQRES 20 A 1160 ASP HIS PRO SER SER LYS PRO VAL GLU VAL ILE GLU SER SEQRES 21 A 1160 ILE LEU ASN ALA ASN SER GLY ASP LEU GLN VAL PHE THR SEQRES 22 A 1160 SER ASN THR LYS LEU ALA ILE ASP THR VAL GLN LYS TYR SEQRES 23 A 1160 TYR SER LEU GLU LEU SER LYS ASN THR LYS ILE ARG GLU SEQRES 24 A 1160 LYS VAL ARG SER ASP PHE SER LYS TYR TYR LEU ALA ASP SEQRES 25 A 1160 VAL VAL LEU THR ALA LYS GLY LYS LYS GLU ILE GLN LYS SEQRES 26 A 1160 GLY SER LEU TYR GLU ASP ILE LYS TYR ALA ILE ASN ARG SEQRES 27 A 1160 THR PRO MET HIS PHE ARG ARG ASP PRO ASP VAL PHE LEU SEQRES 28 A 1160 LYS MET VAL GLU ALA GLU SER LEU ASN LEU LEU SER VAL SEQRES 29 A 1160 LYS LEU HIS MET SER SER GLN ALA GLN TYR ILE GLU HIS SEQRES 30 A 1160 LEU PHE GLN ILE ALA LEU GLU THR THR ASN THR SER ASP SEQRES 31 A 1160 ILE ALA ILE GLU TRP ASN ASN PHE ARG LYS LEU ALA PHE SEQRES 32 A 1160 ASN GLN ALA MET ASP LYS ILE PHE GLN ASP ILE SER GLN SEQRES 33 A 1160 GLU VAL LYS ASP ASN LEU THR LYS ASN CYS GLN LYS LEU SEQRES 34 A 1160 VAL ALA LYS THR VAL ARG HIS LYS PHE MET THR LYS LEU SEQRES 35 A 1160 ASP GLN ALA PRO PHE ILE PRO ASN VAL ARG ASP PRO LYS SEQRES 36 A 1160 ILE PRO LYS ILE LEU SER LEU THR CYS GLY GLN GLY ARG SEQRES 37 A 1160 PHE GLY ALA ASP ALA ILE ILE ALA VAL TYR VAL ASN ARG SEQRES 38 A 1160 LYS GLY ASP PHE ILE ARG ASP TYR LYS ILE VAL ASP ASN SEQRES 39 A 1160 PRO PHE ASP LYS THR ASN PRO GLU LYS PHE GLU ASP THR SEQRES 40 A 1160 LEU ASP ASN ILE ILE GLN SER CYS GLN PRO ASN ALA ILE SEQRES 41 A 1160 GLY ILE ASN GLY PRO ASN PRO LYS THR GLN LYS PHE TYR SEQRES 42 A 1160 LYS ARG LEU GLN GLU VAL LEU HIS LYS LYS GLN ILE VAL SEQRES 43 A 1160 ASP SER ARG GLY HIS THR ILE PRO ILE ILE TYR VAL GLU SEQRES 44 A 1160 ASP GLU VAL ALA ILE ARG TYR GLN ASN SER GLU ARG ALA SEQRES 45 A 1160 ALA GLN GLU PHE PRO ASN LYS PRO PRO LEU VAL LYS TYR SEQRES 46 A 1160 CYS ILE ALA LEU ALA ARG TYR MET HIS SER PRO LEU LEU SEQRES 47 A 1160 GLU TYR ALA ASN LEU THR SER GLU GLU VAL ARG SER LEU SEQRES 48 A 1160 SER ILE HIS PRO HIS GLN ASN LEU LEU SER SER GLU GLN SEQRES 49 A 1160 LEU SER TRP ALA LEU GLU THR ALA PHE VAL ASP ILE VAL SEQRES 50 A 1160 ASN LEU VAL SER VAL GLU VAL ASN LYS ALA THR ASP ASN SEQRES 51 A 1160 ASN TYR TYR ALA SER ALA LEU LYS TYR ILE SER GLY PHE SEQRES 52 A 1160 GLY LYS ARG LYS ALA ILE ASP PHE LEU GLN SER LEU GLN SEQRES 53 A 1160 ARG LEU ASN GLU PRO LEU LEU ALA ARG GLN GLN LEU ILE SEQRES 54 A 1160 THR HIS ASN ILE LEU HIS LYS THR ILE PHE MET ASN SER SEQRES 55 A 1160 ALA GLY PHE LEU TYR ILE SER TRP ASN GLU LYS ARG GLN SEQRES 56 A 1160 LYS TYR GLU ASP LEU GLU HIS ASP GLN LEU ASP SER THR SEQRES 57 A 1160 ARG ILE HIS PRO GLU ASP TYR HIS LEU ALA THR LYS VAL SEQRES 58 A 1160 ALA ALA ASP ALA LEU GLU TYR ASP PRO ASP THR ILE ALA SEQRES 59 A 1160 GLU LYS GLU GLU GLN GLY THR MET SER GLU PHE ILE GLU SEQRES 60 A 1160 LEU LEU ARG GLU ASP PRO ASP ARG ARG ALA LYS LEU GLU SEQRES 61 A 1160 SER LEU ASN LEU GLU SER TYR ALA GLU GLU LEU GLU LYS SEQRES 62 A 1160 ASN THR GLY LEU ARG LYS LEU ASN ASN LEU ASN THR ILE SEQRES 63 A 1160 VAL LEU GLU LEU LEU ASP GLY PHE GLU GLU LEU ARG ASN SEQRES 64 A 1160 ASP PHE HIS PRO LEU GLN GLY ASP GLU ILE PHE GLN SER SEQRES 65 A 1160 LEU THR GLY GLU SER GLU LYS THR PHE PHE LYS GLY SER SEQRES 66 A 1160 ILE ILE PRO VAL ARG VAL GLU ARG PHE TRP HIS ASN ASP SEQRES 67 A 1160 ILE ILE CYS THR THR ASN SER GLU VAL GLU CYS VAL VAL SEQRES 68 A 1160 ASN ALA GLN ARG HIS ALA GLY ALA GLN LEU ARG ARG PRO SEQRES 69 A 1160 ALA ASN GLU ILE TYR GLU ILE GLY LYS THR TYR PRO ALA SEQRES 70 A 1160 LYS VAL ILE TYR ILE ASP TYR ALA ASN ILE THR ALA GLU SEQRES 71 A 1160 VAL SER LEU LEU ASP HIS ASP VAL LYS GLN GLN TYR VAL SEQRES 72 A 1160 PRO ILE SER TYR SER LYS ASP PRO SER ILE TRP ASP LEU SEQRES 73 A 1160 LYS GLN GLU LEU GLU ASP ALA GLU GLU GLU ARG LYS LEU SEQRES 74 A 1160 MET MET ALA GLU ALA ARG ALA LYS ARG THR HIS ARG VAL SEQRES 75 A 1160 ILE ASN HIS PRO TYR TYR PHE PRO PHE ASN GLY ARG GLN SEQRES 76 A 1160 ALA GLU ASP TYR LEU ARG SER LYS GLU ARG GLY GLU PHE SEQRES 77 A 1160 VAL ILE ARG GLN SER SER ARG GLY ASP ASP HIS LEU VAL SEQRES 78 A 1160 ILE THR TRP LYS LEU ASP LYS ASP LEU PHE GLN HIS ILE SEQRES 79 A 1160 ASP ILE GLN GLU LEU GLU LYS GLU ASN PRO LEU ALA LEU SEQRES 80 A 1160 GLY LYS VAL LEU ILE VAL ASP ASN GLN LYS TYR ASN ASP SEQRES 81 A 1160 LEU ASP GLN ILE ILE VAL GLU TYR LEU GLN ASN LYS VAL SEQRES 82 A 1160 ARG LEU LEU ASN GLU MET THR SER SER GLU LYS PHE LYS SEQRES 83 A 1160 SER GLY THR LYS LYS ASP VAL VAL LYS PHE ILE GLU ASP SEQRES 84 A 1160 TYR SER ARG VAL ASN PRO ASN LYS SER VAL TYR TYR PHE SEQRES 85 A 1160 SER LEU ASN HIS ASP ASN PRO GLY TRP PHE TYR LEU MET SEQRES 86 A 1160 PHE LYS ILE ASN ALA ASN SER LYS LEU TYR THR TRP ASN SEQRES 87 A 1160 VAL LYS LEU THR ASN THR GLY TYR PHE LEU VAL ASN TYR SEQRES 88 A 1160 ASN TYR PRO SER VAL ILE GLN LEU CYS ASN GLY PHE LYS SEQRES 89 A 1160 THR LEU LEU LYS SER ASN SER SER LYS ASN ARG MET ASN SEQRES 90 A 1160 ASN TYR ARG HELIX 1 AA1 PRO A 323 ARG A 330 1 8 HELIX 2 AA2 SER A 340 ASN A 360 1 21 HELIX 3 AA3 ASP A 366 LYS A 383 1 18 HELIX 4 AA4 GLU A 387 ARG A 395 1 9 HELIX 5 AA5 ARG A 396 SER A 400 5 5 HELIX 6 AA6 THR A 410 VAL A 434 1 25 HELIX 7 AA7 SER A 618 ASP A 622 5 5 HELIX 8 AA8 THR A 630 ARG A 635 1 6 HELIX 9 AA9 ASP A 637 LEU A 650 1 14 HELIX 10 AB1 ILE A 701 ASP A 734 1 34 HELIX 11 AB2 PRO A 792 GLN A 807 1 16 HELIX 12 AB3 PRO A 818 GLN A 835 1 18 HELIX 13 AB4 ASP A 851 SER A 860 1 10 HELIX 14 AB5 SER A 860 PHE A 867 1 8 HELIX 15 AB6 PRO A 871 SER A 886 1 16 HELIX 16 AB7 SER A 886 LEU A 894 1 9 HELIX 17 AB8 THR A 895 LEU A 902 1 8 HELIX 18 AB9 HIS A 907 LEU A 911 5 5 HELIX 19 AC1 SER A 912 VAL A 931 1 20 HELIX 20 AC2 GLU A 934 THR A 939 1 6 HELIX 21 AC3 ASN A 941 SER A 946 1 6 HELIX 22 AC4 ALA A 947 ILE A 951 5 5 HELIX 23 AC5 GLY A 955 ASN A 970 1 16 HELIX 24 AC6 GLN A 977 HIS A 982 1 6 HELIX 25 AC7 HIS A 986 ALA A 994 1 9 HELIX 26 AC8 ASP A 1014 THR A 1019 5 6 HELIX 27 AC9 HIS A 1022 GLU A 1024 5 3 HELIX 28 AD1 ASP A 1025 GLU A 1038 1 14 HELIX 29 AD2 ASP A 1040 GLY A 1051 1 12 HELIX 30 AD3 MET A 1053 ASP A 1063 1 11 HELIX 31 AD4 ASP A 1065 GLU A 1071 1 7 HELIX 32 AD5 ASN A 1074 GLY A 1087 1 14 HELIX 33 AD6 LYS A 1090 ASP A 1103 1 14 HELIX 34 AD7 GLY A 1117 GLY A 1126 1 10 HELIX 35 AD8 GLY A 1169 ARG A 1173 5 5 HELIX 36 AD9 LEU A 1205 LYS A 1210 1 6 HELIX 37 AE1 ASP A 1226 MET A 1241 1 16 SHEET 1 AA1 2 VAL A 604 LEU A 606 0 SHEET 2 AA1 2 LEU A 653 VAL A 655 -1 O SER A 654 N VAL A 605 SHEET 1 AA2 5 PHE A 776 ILE A 782 0 SHEET 2 AA2 5 ILE A 765 VAL A 770 -1 N ILE A 765 O ILE A 782 SHEET 3 AA2 5 ILE A 750 THR A 754 -1 N SER A 752 O VAL A 768 SHEET 4 AA2 5 ALA A 810 ILE A 813 1 O ALA A 810 N LEU A 751 SHEET 5 AA2 5 ILE A 846 TYR A 848 1 O ILE A 847 N ILE A 811 SHEET 1 AA3 5 ILE A1137 ARG A1141 0 SHEET 2 AA3 5 THR A1185 ASP A1194 -1 O TYR A1186 N VAL A1140 SHEET 3 AA3 5 THR A1199 SER A1203 -1 O GLU A1201 N ILE A1191 SHEET 4 AA3 5 CYS A1160 VAL A1162 1 N VAL A1161 O ALA A1200 SHEET 5 AA3 5 ILE A1150 ILE A1151 -1 N ILE A1150 O VAL A1162 SSBOND 1 CYS A 1152 CYS A 1160 1555 1555 2.06 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000